Pregenerated sensors for ALYREF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025134Ensembl transcript IDs: ENSMUST00000026125.3
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGCCAGCCAGGCAGTGGCCCAGCACTTAAGGGCACCCAGCCTCTaGGGCTTGTCACCTTACTGTGCTCACCCACCTTGGGCTATCCCA | + |
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Preference number: 1 (lower is better) Translates to: KASQAVAQHLRAPSL*GLSPYCAHPPWAIP Trigger: TGGGATAGCCCAAGGTGGGTGAGCACAGTAAGGTGACAAGCCCCAGAGGCTGGGTGCCCTTAAGTGCTGGGCCACTGCCTGGCTGGCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR TCA 90 bp | AATACATTAAGAGTCCTGACCTGTACTCCATTCTCATGTGAACACTaGAGCAAAGGCCAGCCAGGCAGTGGCCCAGCACTTAAGGGCACC | + |
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Preference number: 1 (lower is better) Translates to: NTLRVLTCTPFSCEH*SKGQPGSGPALKGT Trigger: GGTGCCCTTAAGTGCTGGGCCACTGCCTGGCTGGCCTTTGCTTCAGTGTTCACATGAGAATGGAGTACAGGTCAGGACTCTTAATGTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR TCA 90 bp | AGTTTTGAACTACAGGGTTCAAATGATCCTCCCACACCAGGCTCCTaGGTAGCTAGGGTCACAGGAAGTATGCATGCACCACTGAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: SFELQGSNDPPTPGS*VARVTGSMHAPLSP Trigger: TGGGCTCAGTGGTGCATGCATACTTCCTGTGACCCTAGCTACTCAGGAGCCTGGTGTGGGAGGATCATTTGAACCCTGTAGTTCAAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR CCA 90 bp | TCTCAAAAGTTGATTATGGTGATACTTGCCGGTAATCCCAGCATTTaGGAGGCTGTGGCAAGAGGACTGCCACTCCCAGATCAGTCTAGT | + |
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Preference number: 1 (lower is better) Translates to: SQKLIMVILAGNPSI*EAVARGLPLPDQSS Trigger: ACTAGACTGATCTGGGAGTGGCAGTCCTCTTGCCACAGCCTCCCAAATGCTGGGATTACCGGCAAGTATCACCATAATCAACTTTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR CCA 90 bp | TCACACCAGGTACTAGCTACAGCCACAGAGACTCTAATAGCAGGATaGACCAGACAGCTCCAGTTCTACACACATTTCTATTTTATTATG | + |
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Preference number: 1 (lower is better) Translates to: SHQVLATATETLIAG*TRQLQFYTHFYFIM Trigger: CATAATAAAATAGAAATGTGTGTAGAACTGGAGCTGTCTGGTCCATCCTGCTATTAGAGTCTCTGTGGCTGTAGCTAGTACCTGGTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR CCA 90 bp | TTTCCCATTCTTAACCAAAGGAAAGAAAAGTTACCCTACGTTGAATaGGGTGGGACAGACCTATATAGAATTCTAGCACTGGGATTGCTG | + |
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Preference number: 1 (lower is better) Translates to: FPILNQRKEKLPYVE*GGTDLYRILALGLL Trigger: CAGCAATCCCAGTGCTAGAATTCTATATAGGTCTGTCCCACCCCATTCAACGTAGGGTAACTTTTCTTTCCTTTGGTTAAGAATGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR CCA 90 bp | AAGGAGCCAAAATACCTTATCTTTAAACCCAACCCTCTTGGAAATTaGTTTCTGCCTCAGCTTGCATTAGCTATTATACAACTAACTCTG | + |
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Preference number: 1 (lower is better) Translates to: KEPKYLIFKPNPLGN*FLPQLALAIIQLTL Trigger: CAGAGTTAGTTGTATAATAGCTAATGCAAGCTGAGGCAGAAACCAATTTCCAAGAGGGTTGGGTTTAAAGATAAGGTATTTTGGCTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR TCA 90 bp | TGCTGCAAGATACAGACTGAGCAATGTAACAAGATTAGAAATTTCTaGATAAACCATGGACCACTGAATCTAATACTGCCGCCTATACAA | + |
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Preference number: 1 (lower is better) Translates to: CCKIQTEQCNKIRNF*INHGPLNLILPPIQ Trigger: TTGTATAGGCGGCAGTATTAGATTCAGTGGTCCATGGTTTATTCAGAAATTTCTAATCTTGTTACATTGCTCAGTCTGTATCTTGCAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR CCA 90 bp | GCCAGCCAGGCAGTGGCCCAGCACTTAAGGGCACCCAGCCTCTGGGGCTTGTCACACAGGCGAGGCTTCTaGGTCCTGTTACTTGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: ASQAVAQHLRAPSLWGLSHRRGF*VLLLVW Trigger: CCACACAAGTAACAGGACCCAGAAGCCTCGCCTGTG...TGACAAGCCCCAGAGGCTGGGTGCCCTTAAGTGCTGGGCCACTGCCTGGCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR GCA 90 bp | AGGTGGCTGCTCCAACCACGGACGGCTGCCCTCTACTCACAGAAGTACATGCATAAAAGCCTGAAAATGTaGATAGACTCTAAGCAAACA | + |
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Preference number: 2 (lower is better) Translates to: RWLLQPRTAALYSQKYMHKSLKM*IDSKQT Trigger: TGTTTGCTTAGAGTCTATGCACATTTTCAGGCTTTT...ATGCATGTACTTCTGTGAGTAGAGGGCAGCCGTCCGTGGTTGGAGCAGCCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGCAAGAGGACTGCCACTCCCAGATCAGTCTAGTGACTTTCCCATTCTTAAACCCTCTTGGAAATTaGTTTCTGCCTCAGCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: LWQEDCHSQISLVTFPFLNPLGN*FLPQLA Trigger: TGCAAGCTGAGGCAGAAACCAATTTCCAAGAGGGTT...TAAGAATGGGAAAGTCACTAGACTGATCTGGGAGTGGCAGTCCTCTTGCCACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR TCA 90 bp | CCCCTAAAGGAGCCAAAATACCTTATCTTTAAACCCAACCCTCTTGGAAATTGGAGTTGGAGTAAGGCATaGGGACAGTGGGAAGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: PLKEPKYLIFKPNPLGNWSWSKA*GQWEGD Trigger: GTCTCCTTCCCACTGTCCTCATGCCTTACTCCAACT...CCAATTTCCAAGAGGGTTGGGTTTAAAGATAAGGTATTTTGGCTCCTTTAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR GCA 90 bp | CACAGAAGTACATGCATGTGGACAAAACCAGAATACATTAAGAGTCCTGACCTGAAAACATCCAGGCAGTaGCTGCCCAAAGACCACTGC | + |
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Preference number: 2 (lower is better) Translates to: HRSTCMWTKPEYIKSPDLKTSRQ*LPKDHC Trigger: GCAGTGGTCTTTGGGCAGGCACTGCCTGGATGTTTT...CAGGTCAGGACTCTTAATGTATTCTGGTTTTGTCCACATGCATGTACTTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR GCA 90 bp | CCTATGCTCAAGAATCTCAAACCTAACATGTTACAACTATTTGGAAGAGTTTTCCATCCAGGCAGTGCCTaGCCAAAGACCACTGCGCTC | + |
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Preference number: 2 (lower is better) Translates to: PMLKNLKPNMLQLFGRVFHPGSA*PKTTAL Trigger: GAGCGCAGTGGTCTTTGGGCAGGCACTGCCTGGATG...GAAAACTCTTCCAAATAGTTGTAACATGTTAGGTTTGAGATTCTTGAGCATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR GCA 90 bp | CCTATGCTCAAGAATCTCAAACCTAACATGTTACAACTATTTGGAAGAGTTTTCCAGCAGACCTCCCCATaGCCCCTCATCACCTCATGG | + |
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Preference number: 2 (lower is better) Translates to: PMLKNLKPNMLQLFGRVFQQTSP*PLITSW Trigger: CCATGAGGTGATGAGGGGGCATGGGGAGGTCTGCTG...GAAAACTCTTCCAAATAGTTGTAACATGTTAGGTTTGAGATTCTTGAGCATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR TCA 90 bp | CGAGGGCCCTGCTGCAAGATACAGACTGAGCAATGTAACAAGATTAGAAATTTCTACTCCATTCTCATGTaGACACTGAAGCAAAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: RGPCCKIQTEQCNKIRNFYSILM*TLKQRP Trigger: TGGCCTTTGCTTCAGTGTTCACATGAGAATGGAGTA...GAAATTTCTAATCTTGTTACATTGCTCAGTCTGTATCTTGCAGCAGGGCCCTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR GCA 90 bp | CACTCCCAGATCAGTCTAGTGACTTTCCCATTCTTAACCAAAGGAAAGAAAAGTCTTGTCACCTTACTGTaGTCACCCACCTTGGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: HSQISLVTFPFLTKGKKSLVTLL*SPTLGY Trigger: ATAGCCCAAGGTGGGTGAGCACAGTAAGGTGACAAG...ACTTTTCTTTCCTTTGGTTAAGAATGGGAAAGTCACTAGACTGATCTGGGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR GCA 90 bp | CCTATGCTCAAGAATCTCAAACCTAACATGTTACAACTATTTGGAAGAGTTTTCCCAACCACGGACGGCTaGCCTCTACTCACAGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: PMLKNLKPNMLQLFGRVFPTTDG*PLLTEV Trigger: TACTTCTGTGAGTAGAGGGCAGCCGTCCGTGGTTGG...GAAAACTCTTCCAAATAGTTGTAACATGTTAGGTTTGAGATTCTTGAGCATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR TCA 90 bp | CCCCTAAAGGAGCCAAAATACCTTATCTTTAAACCCAACCCTCTTGGAAATTGGCTATGTCACTTTACCTaGAAATTTGGGGATCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PLKEPKYLIFKPNPLGNWLCHFT*KFGDPQ Trigger: CTGAGGATCCCCAAATTTTCAGGTAAAGTGACATAG...CCAATTTCCAAGAGGGTTGGGTTTAAAGATAAGGTATTTTGGCTCCTTTAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR TCA 90 bp | CCTATGCTCAAGAATCTCAAACCTAACATGTTACAACTATTTGGAAGAGTTTTCTTCTCATGTGAACACTaGAGCAAAGGCCAGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PMLKNLKPNMLQLFGRVFFSCEH*SKGQPG Trigger: GCCTGGCTGGCCTTTGCTTCAGTGTTCACATGAGAA...GAAAACTCTTCCAAATAGTTGTAACATGTTAGGTTTGAGATTCTTGAGCATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR GCA 90 bp | CACAGAAGTACATGCATGTGGACAAAACCAGAATACATTAAGAGTCCTGACCTGGTTTCAAGCTTCCATTaGTCAGCCACACTACTCAAA | + |
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Preference number: 2 (lower is better) Translates to: HRSTCMWTKPEYIKSPDLVSSFH*SATLLK Trigger: TTTGAGTAGTGTGGCTGAGCAATGGAAGCTTGAAAC...CAGGTCAGGACTCTTAATGTATTCTGGTTTTGTCCACATGCATGTACTTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR CCA 90 bp | CACTCCCAGATCAGTCTAGTGACTTTCCCATTCTTAACCAAAGGAAAGAAAAGTTTACTCCTTAGCAGGTaGTTTGGAAGCCCATTTCTC | + |
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Preference number: 2 (lower is better) Translates to: HSQISLVTFPFLTKGKKSLLLSR*FGSPFL Trigger: GAGAAATGGGCTTCCAAACCACCTGCTAAGGAGTAA...ACTTTTCTTTCCTTTGGTTAAGAATGGGAAAGTCACTAGACTGATCTGGGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAAAACACAAAGGAAACACCACAGGTTCAAAGCTGAAACCAGGTTTCTCTTTATTATGGCAAAGGTaGAAATGCCACCTTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: TEKHKGNTTGSKLKPGFSLLWQR*KCHLLH Trigger: GTGGAGAAGGTGGCATTTTCACCTTTGCCATAATAA...AGAGAAACCTGGTTTCAGCTTTGAACCTGTGGTGTTTCCTTTGTGTTTTTCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR TCA 90 bp | GACATGCTTACACGCAAAACACCTATACACAGTGAAAGATTTCTGAAAGATTCTTTAACACTTGATGCCTaGAGGGCGGATTACTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: DMLTRKTPIHSERFLKDSLTLDA*RADYSL Trigger: TAAGGAGTAATCCGCCCTTCAGGCATCAAGTGTTAA...AGAATCTTTCAGAAATCTTTCACTGTGTATAGGTGTTTTGCGTGTAAGCATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR CAA 90 bp | CTAACATGTTACAACTATTTGGAAGAGTTTTCACTTTCTCAAAAGTaGATTATGGTGATACTTGCCGGTAATCCCAGCATTTGGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LTCYNYLEEFSLSQK*IMVILAGNPSIWEA Trigger: AGCCTCCCAAATGCTGGGATTACCGGCAAGTATCACCATAATCAACTTTTGAGAAAGTGAAAACTCTTCCAAATAGTTGTAACATGTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCTAAAGGAGCCAAAATACCTTATCTTTAAACCCAACCCTCTTGGAAATTGGCTTTACCTGAAAATTTaGGGATCCTCAGATTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: PLKEPKYLIFKPNPLGNWLYLKI*GSSDFD Trigger: ATCAAAATCTGAGGATCCCCAAATTTTCAGGTAAAG...CCAATTTCCAAGAGGGTTGGGTTTAAAGATAAGGTATTTTGGCTCCTTTAGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR CCA 90 bp | CCTATGCTCAAGAATCTCAAACCTAACATGTTACAACTATTTGGAAGAGTTTTCAACCAAACCCTCTTCTaGTTTCTAAGGGCAATGCTC | + |
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Preference number: 2 (lower is better) Translates to: PMLKNLKPNMLQLFGRVFNQTLF*FLRAML Trigger: GAGCATTGCCCTTAGAAACCAGAAGAGGGTTTGGTT...GAAAACTCTTCCAAATAGTTGTAACATGTTAGGTTTGAGATTCTTGAGCATAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR GCA 90 bp | CCTATGCTCAAGAATCTCAAACCTAACATGTTACAACTATTTGGAAGAGTTTTCACTCACAGAAGTACATaGATGTGGACAAAACCAGAA | + |
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Preference number: 2 (lower is better) Translates to: PMLKNLKPNMLQLFGRVFTHRST*MWTKPE Trigger: TTCTGGTTTTGTCCACATGCATGTACTTCTGTGAGT...GAAAACTCTTCCAAATAGTTGTAACATGTTAGGTTTGAGATTCTTGAGCATAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR CAA 90 bp | CCAGCCCTATGCTCAAGAATCTCAAACCTAACATGTTACAACTATTaGGAAGAGTTTTCACTTTCTCAAAAGTTGATTATGGTGATACTT | + |
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Preference number: 2 (lower is better) Translates to: PALCSRISNLTCYNY*EEFSLSQKLIMVIL Trigger: AAGTATCACCATAATCAACTTTTGAGAAAGTGAAAACTCTTCCAAATAGTTGTAACATGTTAGGTTTGAGATTCTTGAGCATAGGGCTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR CAA 90 bp | GCCAGCCAGGCAGTGGCCCAGCACTTAAGGGCACCCAGCCTCTGGGGCTTGTCAGGGGATCCTCAGATTTaGATACTGCCAGTGAGCATC | + |
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Preference number: 3 (lower is better) Translates to: ASQAVAQHLRAPSLWGLSGDPQI*ILPVSI Trigger: GATGCTCACTGGCAGTATCAAAATCTGAGGATCCCC...TGACAAGCCCCAGAGGCTGGGTGCCCTTAAGTGCTGGGCCACTGCCTGGCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR GCA 72 bp | GTCCCAGTGAGGCCCTGTCTAAAAACACCAGGTGGCTaGTCCAACCACGGACGGCTGCCCTCTACTCACAGA | + |
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Preference number: 3 (lower is better) Translates to: VPVRPCLKTPGG*SNHGRLPSTHR Trigger: TCTGTGAGTAGAGGGCAGCCGTCCGTGGTTGGAGCAGCCACCTGGTGTTTTTAGACAGGGCCTCACTGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR GCA 72 bp | CACCTCATGGTGCACGCAAAACATCCAGGCAGTGCCTaGCCAAAGACCACTGCGCTCTATAGGCTCCCACCT | + |
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Preference number: 3 (lower is better) Translates to: HLMVHAKHPGSA*PKTTALYRLPP Trigger: AGGTGGGAGCCTATAGAGCGCAGTGGTCTTTGGGCAGGCACTGCCTGGATGTTTTGCGTGCACCATGAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR CAA 90 bp | AGGTGGCTGCTCCAACCACGGACGGCTGCCCTCTACTCACAGAAGTACATGCATCAACCCTCTTGGAAATaGGTTTCTGCCTCAGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: RWLLQPRTAALYSQKYMHQPSWK*VSASAC Trigger: GCAAGCTGAGGCAGAAACCAATTTCCAAGAGGGTTG...ATGCATGTACTTCTGTGAGTAGAGGGCAGCCGTCCGTGGTTGGAGCAGCCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR TCA 72 bp | CTTACTGTGCTCACCCACCTTGGGCTATCCCAGCACTaGGACACTAGGGCAAGTTTCAAGCTTCCATTGCTC | + |
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Preference number: 3 (lower is better) Translates to: LTVLTHLGLSQH*DTRASFKLPLL Trigger: GAGCAATGGAAGCTTGAAACTTGCCCTAGTGTCTCAGTGCTGGGATAGCCCAAGGTGGGTGAGCACAGTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR TCA 72 bp | TACATTAAGAGTCCTGACCTGTACTCCATTCTCATGTaGACACTGAAGCAAAGGCCAGCCAGGCAGTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: YIKSPDLYSILM*TLKQRPARQWP Trigger: GGGCCACTGCCTGGCTGGCCTTTGCTTCAGTGTTCACATGAGAATGGAGTACAGGTCAGGACTCTTAATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR CAA 90 bp | CACAGAAGTACATGCATGTGGACAAAACCAGAATACATTAAGAGTCCTGACCTGGTCTGCACAGTTCAGTaGCCAACCCTCCCTCTAGGC | + |
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Preference number: 3 (lower is better) Translates to: HRSTCMWTKPEYIKSPDLVCTVQ*PTLPLG Trigger: GCCTAGAGGGAGGGTTGGCAACTGAACTGTGCAGAC...CAGGTCAGGACTCTTAATGTATTCTGGTTTTGTCCACATGCATGTACTTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR GCA 72 bp | AGCACTGAGACACTAGGGCAAGTTTCAAGCTTCCATTaGTCAGCCACACTACTCAAAATCCTGCCTCTAACC | + |
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Preference number: 3 (lower is better) Translates to: STETLGQVSSFH*SATLLKILPLT Trigger: GGTTAGAGGCAGGATTTTGAGTAGTGTGGCTGAGCAATGGAAGCTTGAAACTTGCCCTAGTGTCTCAGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR CAA 90 bp | CGAGGGCCCTGCTGCAAGATACAGACTGAGCAATGTAACAAGATTAGAAATTTCTCTGGGTCCTGTTACTaGTGTGGATTTGCTCAGTTG | + |
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Preference number: 3 (lower is better) Translates to: RGPCCKIQTEQCNKIRNFSGSCY*CGFAQL Trigger: CAACTGAGCAAATCCACACAAGTAACAGGACCCAGA...GAAATTTCTAATCTTGTTACATTGCTCAGTCTGTATCTTGCAGCAGGGCCCTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR TCA 72 bp | TGTGAAACCTGGGAGTCACCTCCAATCACCCCAAGTTaGAAGCAGAGATGGCAATGTCAAAAATCTGGGATA | + |
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Preference number: 3 (lower is better) Translates to: CETWESPPITPS*KQRWQCQKSGI Trigger: TATCCCAGATTTTTGACATTGCCATCTCTGCTTTCAACTTGGGGTGATTGGAGGTGACTCCCAGGTTTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR TCA 72 bp | TTTCTCATAAAACCGCAAACTGAAGACTCATCTACCTaGTGTGAAACCTGGGAGTCACCTCCAATCACCCCA | + |
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Preference number: 3 (lower is better) Translates to: FLIKPQTEDSST*CETWESPPITP Trigger: TGGGGTGATTGGAGGTGACTCCCAGGTTTCACATCAGGTAGATGAGTCTTCAGTTTGCGGTTTTATGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR TCA 72 bp | ATACTGCCGCCTATACAAGATTTAACACTTGATGCCTaGAGGGCGGATTACTCCTTAGCAGGTGGTTTGGAA | + |
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Preference number: 3 (lower is better) Translates to: ILPPIQDLTLDA*RADYSLAGGLE Trigger: TTCCAAACCACCTGCTAAGGAGTAATCCGCCCTTCAGGCATCAAGTGTTAAATCTTGTATAGGCGGCAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR CCA 72 bp | GTACTAGCTACAGCCACAGAGACTCTAATAGCAGGATaGACCAGACAGCTCCAGTTCTACACACATTTCTAT | + |
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Preference number: 3 (lower is better) Translates to: VLATATETLIAG*TRQLQFYTHFY Trigger: ATAGAAATGTGTGTAGAACTGGAGCTGTCTGGTCCATCCTGCTATTAGAGTCTCTGTGGCTGTAGCTAGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR TCA 72 bp | GTCTCCAGAGCCAACCAGGAACAAAAATATCCCAATTaGAGATTACACATGCTAGACATTTACCTTCCCCAA | + |
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Preference number: 3 (lower is better) Translates to: VSRANQEQKYPN*RLHMLDIYLPQ Trigger: TTGGGGAAGGTAAATGTCTAGCATGTGTAATCTTCAATTGGGATATTTTTGTTCCTGGTTGGCTCTGGAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR GCA 72 bp | TTTCTAAGGGCAATGCTCATACACGGGTGTAAGACATaGTTACACGCAAAACACCTATACACAGTGAAAGAT | + |
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Preference number: 3 (lower is better) Translates to: FLRAMLIHGCKT*LHAKHLYTVKD Trigger: ATCTTTCACTGTGTATAGGTGTTTTGCGTGTAAGCATGTCTTACACCCGTGTATGAGCATTGCCCTTAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR CCA 72 bp | CTTAACCAAAGGAAAGAAAAGTTACCCTACGTTGAATaGGGTGGGACAGACCTATATAGAATTCTAGCACTG | + |
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Preference number: 3 (lower is better) Translates to: LNQRKEKLPYVE*GGTDLYRILAL Trigger: CAGTGCTAGAATTCTATATAGGTCTGTCCCACCCCATTCAACGTAGGGTAACTTTTCTTTCCTTTGGTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR CAA 90 bp | ACAGAAAAACACAAAGGAAACACCACAGGTTCAAAGCTGAAACCAGGTTTCTCTAAAACAAATCCACCATaGTCTGCACAGTTCAGTTGC | + |
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Preference number: 3 (lower is better) Translates to: TEKHKGNTTGSKLKPGFSKTNPP*SAQFSC Trigger: GCAACTGAACTGTGCAGACAATGGTGGATTTGTTTT...AGAGAAACCTGGTTTCAGCTTTGAACCTGTGGTGTTTCCTTTGTGTTTTTCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR CAA 90 bp | GACATGCTTACACGCAAAACACCTATACACAGTGAAAGATTTCTGAAAGATTCTTCCAATCACCCCAAGTaGAAAGCAGAGATGGCAATG | + |
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Preference number: 3 (lower is better) Translates to: DMLTRKTPIHSERFLKDSSNHPK*KAEMAM Trigger: CATTGCCATCTCTGCTTTCAACTTGGGGTGATTGGA...AGAATCTTTCAGAAATCTTTCACTGTGTATAGGTGTTTTGCGTGTAAGCATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR CAA 90 bp | GACATGCTTACACGCAAAACACCTATACACAGTGAAAGATTTCTGAAAGATTCTTTAAACCCAACCCTCTaGGAAATTGGTTTCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: DMLTRKTPIHSERFLKDSLNPTL*EIGFCL Trigger: GAGGCAGAAACCAATTTCCAAGAGGGTTGGGTTTAA...AGAATCTTTCAGAAATCTTTCACTGTGTATAGGTGTTTTGCGTGTAAGCATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR-3UTR CAA 90 bp | GACATGCTTACACGCAAAACACCTATACACAGTGAAAGATTTCTGAAAGATTCTAGTTTCAAGCTTCCATaGCTCAGCCACACTACTCAA | + |
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Preference number: 3 (lower is better) Translates to: DMLTRKTPIHSERFLKDSSFKLP*LSHTTQ Trigger: TTGAGTAGTGTGGCTGAGCAATGGAAGCTTGAAACT...AGAATCTTTCAGAAATCTTTCACTGTGTATAGGTGTTTTGCGTGTAAGCATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS-3UTR GCA 90 bp | GCCAGCCAGGCAGTGGCCCAGCACTTAAGGGCACCCAGCCTCTGGGGCTTGTCATGCCGCCTCTGTTTATaGTCTGTGCAGGTCTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASQAVAQHLRAPSLWGLSCRLCL*SVQVFA Trigger: AGCGAAGACCTGCACAGAGCATAAACAGAGGCGGCA...TGACAAGCCCCAGAGGCTGGGTGCCCTTAAGTGCTGGGCCACTGCCTGGCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS-3UTR GCA 90 bp | AGGTGGCTGCTCCAACCACGGACGGCTGCCCTCTACTCACAGAAGTACATGCATCTGTCGAAGAGGTCGTaGTGCCATTTGTCGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RWLLQPRTAALYSQKYMHLSKRS*CHLSGS Trigger: ACTTCCCGACAAATGGCAGCACGACCTCTTCGACAG...ATGCATGTACTTCTGTGAGTAGAGGGCAGCCGTCCGTGGTTGGAGCAGCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS-3UTR CCA 90 bp | CTGTGGCAAGAGGACTGCCACTCCCAGATCAGTCTAGTGACTTTCCCATTCTTACTCCGAAGTCCAGGTTaGACACCAGCAGCTTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LWQEDCHSQISLVTFPFLLRSPG*TPAASR Trigger: GCGGGAAGCTGCTGGTGTCCAACCTGGACTTCGGAG...TAAGAATGGGAAAGTCACTAGACTGATCTGGGAGTGGCAGTCCTCTTGCCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS-3UTR GCA 90 bp | CTGTGGCAAGAGGACTGCCACTCCCAGATCAGTCTAGTGACTTTCCCATTCTTAGTGTCCCTCTCCTGGTaGCACCACCACCAAAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LWQEDCHSQISLVTFPFLVSLSW*HHHQNL Trigger: GAGGTTTTGGTGGTGGTGGCACCAGGAGAGGGACAC...TAAGAATGGGAAAGTCACTAGACTGATCTGGGAGTGGCAGTCCTCTTGCCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS-3UTR GCA 90 bp | CTGTGGCAAGAGGACTGCCACTCCCAGATCAGTCTAGTGACTTTCCCATTCTTATCCTCTGCAGAAAGCTaGTGCTTTGAGTTCCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LWQEDCHSQISLVTFPFLSSAES*CFEFLP Trigger: CGGCAGGAACTCAAAGCAGCAGCTTTCTGCAGAGGA...TAAGAATGGGAAAGTCACTAGACTGATCTGGGAGTGGCAGTCCTCTTGCCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS-3UTR CCA 90 bp | CACAGAAGTACATGCATGTGGACAAAACCAGAATACATTAAGAGTCCTGACCTGCCGCGGCCTCCTCGCTaGCTCCGGTTCAGCTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: HRSTCMWTKPEYIKSPDLPRPPR*LRFSLM Trigger: CATTAAGCTGAACCGGAGCCAGCGAGGAGGCCGCGG...CAGGTCAGGACTCTTAATGTATTCTGGTTTTGTCCACATGCATGTACTTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR CAA 72 bp | AAACAAAACAAATCCACCATTGTCTGCACAGTTCAGTaGCCAACCCTCCCTCTAGGCATCACAGGCGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KQNKSTIVCTVQ*PTLPLGITGEA Trigger: AGCCTCGCCTGTGATGCCTAGAGGGAGGGTTGGCAACTGAACTGTGCAGACAATGGTGGATTTGTTTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS-3UTR CCA 90 bp | ACAGAAAAACACAAAGGAAACACCACAGGTTCAAAGCTGAAACCAGGTTTCTCTCACGTGTCCCTCTCCTaGTGCCACCACCACCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TEKHKGNTTGSKLKPGFSHVSLS*CHHHQN Trigger: GTTTTGGTGGTGGTGGCACCAGGAGAGGGACACGTG...AGAGAAACCTGGTTTCAGCTTTGAACCTGTGGTGTTTCCTTTGTGTTTTTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS-3UTR GCA 90 bp | ACAGAAAAACACAAAGGAAACACCACAGGTTCAAAGCTGAAACCAGGTTTCTCTGTAAGCATCCAGCTGTaGGTCCAACTCCTCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: TEKHKGNTTGSKLKPGFSVSIQL*VQLLCR Trigger: TCTGCAGAGGAGTTGGACGCACAGCTGGATGCTTAC...AGAGAAACCTGGTTTCAGCTTTGAACCTGTGGTGTTTCCTTTGTGTTTTTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS-3UTR CCA 90 bp | CCCCTAAAGGAGCCAAAATACCTTATCTTTAAACCCAACCCTCTTGGAAATTGGTGTGATGTGACAAGCTaGATGTTCATAGGGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLKEPKYLIFKPNPLGNWCDVTS*MFIGRP Trigger: TGGCCGCCCTATGAACATCCAGCTTGTCACATCACA...CCAATTTCCAAGAGGGTTGGGTTTAAAGATAAGGTATTTTGGCTCCTTTAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS-3UTR GCA 90 bp | ACAGAAAAACACAAAGGAAACACCACAGGTTCAAAGCTGAAACCAGGTTTCTCTTCGAAGAGGTCGTGCTaGCATTTGTCGGGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TEKHKGNTTGSKLKPGFSSKRSC*HLSGSC Trigger: ACAACTTCCCGACAAATGGCAGCACGACCTCTTCGA...AGAGAAACCTGGTTTCAGCTTTGAACCTGTGGTGTTTCCTTTGTGTTTTTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS-3UTR GCA 90 bp | ACAGAAAAACACAAAGGAAACACCACAGGTTCAAAGCTGAAACCAGGTTTCTCTAGCCTTCAGGGCATCTaGTTTCCGTTCAAAGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TEKHKGNTTGSKLKPGFSSLQGI*FPFKVH Trigger: GTGCACTTTGAACGGAAAGCAGATGCCCTGAAGGCT...AGAGAAACCTGGTTTCAGCTTTGAACCTGTGGTGTTTCCTTTGTGTTTTTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS-3UTR GCA 90 bp | CCTATGCTCAAGAATCTCAAACCTAACATGTTACAACTATTTGGAAGAGTTTTCGCTGCTTTGAGTTCCTaGCGGTGCCTCTACCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PMLKNLKPNMLQLFGRVFAALSS*RCLYLF Trigger: GAAGAGGTAGAGGCACCGGCAGGAACTCAAAGCAGC...GAAAACTCTTCCAAATAGTTGTAACATGTTAGGTTTGAGATTCTTGAGCATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS-3UTR TCA 90 bp | GACATGCTTACACGCAAAACACCTATACACAGTGAAAGATTTCTGAAAGATTCTCTGAATATCAGCATCTaGCACTCCGAAGTCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DMLTRKTPIHSERFLKDSLNISI*HSEVQV Trigger: AACCTGGACTTCGGAGTGTCAGATGCTGATATTCAG...AGAATCTTTCAGAAATCTTTCACTGTGTATAGGTGTTTTGCGTGTAAGCATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| 3UTR CAA 72 bp | TACAACTATTTGGAAGAGTTTTCACTTTCTCAAAAGTaGATTATGGTGATACTTGCCGGTAATCCCAGCATT | + |
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Preference number: 4 (lower is better) Translates to: YNYLEEFSLSQK*IMVILAGNPSI Trigger: AATGCTGGGATTACCGGCAAGTATCACCATAATCAACTTTTGAGAAAGTGAAAACTCTTCCAAATAGTTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS GCA 90 bp | TTGTTTCGGTCTGCTGTACGGCGCCGGCCGGTTCCTGCCGCCGCCTaGGGCGCCGCGGGCGATGGCGGGCCGGTTCCTCATAGGCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: LFRSAVRRRPVPAAA*GAAGDGGPVPHRPA Trigger: GGCGGGCCTATGAGGAACCGGCCCGCCATCGCCCGCGGCGCCGCAGGCGGCGGCAGGAACCGGCCGGCGCCGTACAGCAGACCGAAACAA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS GCA 90 bp | TGTCGGGAAGTTGTTTCGGTCTGCTGTACGGCGCCGGCCGGTTCCTaGCGCCGCCTGCGGCGCCGCGGGCGATGGCGGGCCGGTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CREVVSVCCTAPAGS*RRLRRRGRWRAGSS Trigger: TGAGGAACCGGCCCGCCATCGCCCGCGGCGCCGCAGGCGGCGGCAGGAACCGGCCGGCGCCGTACAGCAGACCGAAACAACTTCCCGACA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS GCA 90 bp | TCCACGCCGGCTCCACCCCCGAAGCCGCTGTCGAAGAGGTCGTGCTaGCATTTGTCGGGAAGTTGTTTCGGTCTGCTGTACGGCGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: STPAPPPKPLSKRSC*HLSGSCFGLLYGAG Trigger: GCCGGCGCCGTACAGCAGACCGAAACAACTTCCCGACAAATGGCAGCACGACCTCTTCGACAGCGGCTTCGGGGGTGGAGCCGGCGTGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS GCA 90 bp | GTCTCCACGCCGGCTCCACCCCCGAAGCCGCTGTCGAAGAGGTCGTaGTGCCATTTGTCGGGAAGTTGTTTCGGTCTGCTGTACGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VSTPAPPPKPLSKRS*CHLSGSCFGLLYGA Trigger: GGCGCCGTACAGCAGACCGAAACAACTTCCCGACAAATGGCAGCACGACCTCTTCGACAGCGGCTTCGGGGGTGGAGCCGGCGTGGAGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS-3UTR CAA 90 bp | GCCAGCCAGGCAGTGGCCCAGCACTTAAGGGCACCCAGCCTCTGGGGCTTGTCAAGGTCGTGCTGCCATTaGTCGGGAAGTTGTTTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: ASQAVAQHLRAPSLWGLSRSCCH*SGSCFG Trigger: ACCGAAACAACTTCCCGACAAATGGCAGCACGACCT...TGACAAGCCCCAGAGGCTGGGTGCCCTTAAGTGCTGGGCCACTGCCTGGCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS-3UTR CAA 90 bp | CTGTGGCAAGAGGACTGCCACTCCCAGATCAGTCTAGTGACTTTCCCATTCTTAAGCTGGTGTCCATCCTaGCATTGTAAGCATCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LWQEDCHSQISLVTFPFLSWCPS*HCKHPA Trigger: AGCTGGATGCTTACAATGCAAGGATGGACACCAGCT...TAAGAATGGGAAAGTCACTAGACTGATCTGGGAGTGGCAGTCCTCTTGCCACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS-3UTR CAA 90 bp | CCTATGCTCAAGAATCTCAAACCTAACATGTTACAACTATTTGGAAGAGTTTTCACTCCGAAGTCCAGGTaGGACACCAGCAGCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PMLKNLKPNMLQLFGRVFTPKSR*DTSSFP Trigger: CGGGAAGCTGCTGGTGTCCAACCTGGACTTCGGAGT...GAAAACTCTTCCAAATAGTTGTAACATGTTAGGTTTGAGATTCTTGAGCATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS GCA 72 bp | TCTGCTGTACGGCGCCGGCCGGTTCCTGCCGCCGCCTaGGGCGCCGCGGGCGATGGCGGGCCGGTTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: SAVRRRPVPAAA*GAAGDGGPVPH Trigger: ATGAGGAACCGGCCCGCCATCGCCCGCGGCGCCGCAGGCGGCGGCAGGAACCGGCCGGCGCCGTACAGCAGA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS CAA 90 bp | CCGGCTCCACCCCCGAAGCCGCTGTCGAAGAGGTCGTGCTGCCATTaGTCGGGAAGTTGTTTCGGTCTGCTGTACGGCGCCGGCCGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PAPPPKPLSKRSCCH*SGSCFGLLYGAGRF Trigger: GAACCGGCCGGCGCCGTACAGCAGACCGAAACAACTTCCCGACAAATGGCAGCACGACCTCTTCGACAGCGGCTTCGGGGGTGGAGCCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS GCA 72 bp | TTGAGTTCCTGCCGGTGCCTCTACCTCTTCCCCGGCTaGCTCCACGTGTCCCTCTCCTGGTGCCACCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: LSSCRCLYLFPG*LHVSLSWCHHH Trigger: GTGGTGGTGGCACCAGGAGAGGGACACGTGGAGGCAGCCGGGGAAGAGGTAGAGGCACCGGCAGGAACTCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS GCA 72 bp | CCGGCTCCACCCCCGAAGCCGCTGTCGAAGAGGTCGTaGTGCCATTTGTCGGGAAGTTGTTTCGGTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PAPPPKPLSKRS*CHLSGSCFGLL Trigger: CAGCAGACCGAAACAACTTCCCGACAAATGGCAGCACGACCTCTTCGACAGCGGCTTCGGGGGTGGAGCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS CAA 72 bp | CCCCCGAAGCCGCTGTCGAAGAGGTCGTGCTGCCATTaGTCGGGAAGTTGTTTCGGTCTGCTGTACGGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPKPLSKRSCCH*SGSCFGLLYGA Trigger: GGCGCCGTACAGCAGACCGAAACAACTTCCCGACAAATGGCAGCACGACCTCTTCGACAGCGGCTTCGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS CAA 72 bp | GCTGTCGAAGAGGTCGTGCTGCCATTTGTCGGGAAGTaGTTTCGGTCTGCTGTACGGCGCCGGCCGGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AVEEVVLPFVGK*FRSAVRRRPVP Trigger: AGGAACCGGCCGGCGCCGTACAGCAGACCGAAACAACTTCCCGACAAATGGCAGCACGACCTCTTCGACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS GCA 72 bp | GCTCCACCCCCGAAGCCGCTGTCGAAGAGGTCGTGCTaGCATTTGTCGGGAAGTTGTTTCGGTCTGCTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: APPPKPLSKRSC*HLSGSCFGLLY Trigger: GTACAGCAGACCGAAACAACTTCCCGACAAATGGCAGCACGACCTCTTCGACAGCGGCTTCGGGGGTGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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| CDS GCA 72 bp | GCATCCAGCTGTGCGTCCAACTCCTCTGCAGAAAGCTaGTGCTTTGAGTTCCTGCCGGTGCCTCTACCTCTT | + |
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Preference number: 6 (lower is better) Translates to: ASSCASNSSAES*CFEFLPVPLPL Trigger: AAGAGGTAGAGGCACCGGCAGGAACTCAAAGCAGCAGCTTTCTGCAGAGGAGTTGGACGCACAGCTGGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026125.3 |
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