Pregenerated sensors for ALX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014603Ensembl transcript IDs: ENSMUST00000014747.3
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTTCCAGAACCACCCAGGTTATGGAGGTAAAAGGGTTTGCTGTTTaGTGTCCAGGTAGAGATGGGCTAGGAGCAGGTCAGAGCAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: ASRTTQVMEVKGFAV*CPGRDGLGAGQSRK Trigger: CTTCCTGCTCTGACCTGCTCCTAGCCCATCTCTACCTGGACACCAAACAGCAAACCCTTTTACCTCCATAACCTGGGTGGTTCTGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGAGCGTACCGCCCCCTGGTGGTAGGAAGGCAAAAGTGAGGCCAGCCCTAAAAGGGTTTGCTGTTTaGTGTCCAGGTAGAGATGGG | + |
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Preference number: 2 (lower is better) Translates to: ELSVPPPGGRKAKVRPALKGFAV*CPGRDG Trigger: CCCATCTCTACCTGGACACCAAACAGCAAACCCTTT...TAGGGCTGGCCTCACTTTTGCCTTCCTACCACCAGGGGGCGGTACGCTCAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| 3UTR-3UTR TCA 90 bp | TTTGATCGATGTCCAATATGGTTTTCATGGCATATCCCTGATCCCATGAAAGCATTCCCTGCAGGAGGCTaGGGGTCCCAGCTCCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: FDRCPIWFSWHIPDPMKAFPAGG*GSQLLF Trigger: GAAGAGGAGCTGGGACCCTCAGCCTCCTGCAGGGAA...TGCTTTCATGGGATCAGGGATATGCCATGAAAACCATATTGGACATCGATCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| 3UTR-3UTR TCA 90 bp | TTTGATCGATGTCCAATATGGTTTTCATGGCATATCCCTGATCCCATGAAAGCAAGCACAGGGCAGAAGTaGGGGATGCTTGGAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: FDRCPIWFSWHIPDPMKASTGQK*GMLGTE Trigger: CTCTGTTCCAAGCATCCCTCACTTCTGCCCTGTGCT...TGCTTTCATGGGATCAGGGATATGCCATGAAAACCATATTGGACATCGATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| 3UTR-3UTR GCA 90 bp | TTTGATCGATGTCCAATATGGTTTTCATGGCATATCCCTGATCCCATGAAAGCACCTCCCTGTTTAGTCTaGACCCTCCTCCCATCTTCC | + |
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Preference number: 2 (lower is better) Translates to: FDRCPIWFSWHIPDPMKAPPCLV*TLLPSS Trigger: GGAAGATGGGAGGAGGGTGCAGACTAAACAGGGAGG...TGCTTTCATGGGATCAGGGATATGCCATGAAAACCATATTGGACATCGATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| 3UTR-3UTR GCA 90 bp | TTTGATCGATGTCCAATATGGTTTTCATGGCATATCCCTGATCCCATGAAAGCAGGCAGAAGTGAGGGATaGTTGGAACAGAGGAGACCC | + |
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Preference number: 2 (lower is better) Translates to: FDRCPIWFSWHIPDPMKAGRSEG*LEQRRP Trigger: GGGTCTCCTCTGTTCCAAGCATCCCTCACTTCTGCC...TGCTTTCATGGGATCAGGGATATGCCATGAAAACCATATTGGACATCGATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| 3UTR-3UTR GCA 90 bp | TTTGATCGATGTCCAATATGGTTTTCATGGCATATCCCTGATCCCATGAAAGCAAGGAGGAGTCCTACCTaGTTTGAAGTCCCTGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: FDRCPIWFSWHIPDPMKARRSPT*FEVPVS Trigger: GGAGACAGGGACTTCAAAGCAGGTAGGACTCCTCCT...TGCTTTCATGGGATCAGGGATATGCCATGAAAACCATATTGGACATCGATCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| 3UTR-3UTR CAA 90 bp | TTTGATCGATGTCCAATATGGTTTTCATGGCATATCCCTGATCCCATGAAAGCATCACCGTCTGGGATCTaGTCAGTCCCAGGAGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: FDRCPIWFSWHIPDPMKASPSGI*SVPGAE Trigger: CTCAGCTCCTGGGACTGACAAGATCCCAGACGGTGA...TGCTTTCATGGGATCAGGGATATGCCATGAAAACCATATTGGACATCGATCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR TCA 90 bp | GAGCTGAGCGTACCGCCCCCTGGTGGTAGGAAGGCAAAAGTGAGGCCAGCCCTAGGCGCGGGGTGCAGGTaGGGCGCAGCATCGGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: ELSVPPPGGRKAKVRPALGAGCR*GAASGV Trigger: GACTCCCGATGCTGCGCCTCACCTGCACCCCGCGCC...TAGGGCTGGCCTCACTTTTGCCTTCCTACCACCAGGGGGCGGTACGCTCAGCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR GCA 90 bp | GAGCTGAGCGTACCGCCCCCTGGTGGTAGGAAGGCAAAAGTGAGGCCAGCCCTACCTGGCCCGAGGTCCTaGAGGTACTTGGCGGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: ELSVPPPGGRKAKVRPALPGPRS*RYLAGG Trigger: GCCGCCCGCCAAGTACCTGCAGGACCTCGGGCCAGG...TAGGGCTGGCCTCACTTTTGCCTTCCTACCACCAGGGGGCGGTACGCTCAGCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CCA 90 bp | GAGCTGAGCGTACCGCCCCCTGGTGGTAGGAAGGCAAAAGTGAGGCCAGCCCTAGTTGAGCACCGGGCCTaGCCCGAGGTCCTGCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: ELSVPPPGGRKAKVRPALVEHRA*PEVLQV Trigger: TACCTGCAGGACCTCGGGCCAGGCCCGGTGCTCAAC...TAGGGCTGGCCTCACTTTTGCCTTCCTACCACCAGGGGGCGGTACGCTCAGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR TCA 90 bp | AGATGGGCTAGGAGCAGGTCAGAGCAGGAAGAGAAGTGGACAGCTCAGTCTGTGAGAAGTGGCCGCCGTTaGGCACCGGGCCTGGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: RWARSRSEQEEKWTAQSVRSGRR*APGLAR Trigger: TCGGGCCAGGCCCGGTGCTCAACGGCGGCCACTTCT...CACAGACTGAGCTGTCCACTTCTCTTCCTGCTCTGACCTGCTCCTAGCCCATCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CCA 90 bp | GAGCTGAGCGTACCGCCCCCTGGTGGTAGGAAGGCAAAAGTGAGGCCAGCCCTATGGGCTTCCAGATCCTaGACTGGGCCACAGGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: ELSVPPPGGRKAKVRPALWASRS*TGPQGV Trigger: AACTCCCTGTGGCCCAGTCCAGGATCTGGAAGCCCA...TAGGGCTGGCCTCACTTTTGCCTTCCTACCACCAGGGGGCGGTACGCTCAGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CCA 90 bp | TGTCAGTCCCAGGAGCTGAGCGTACCGCCCCCTGGTGGTAGGAAGGCAAAAGTGAGAGGGGATGCCCTCTaGAGACATGAGACAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: CQSQELSVPPPGGRKAKVRGDAL*RHETGP Trigger: GGGCCCTGTCTCATGTCTCCAGAGGGCATCCCCTCT...CACTTTTGCCTTCCTACCACCAGGGGGCGGTACGCTCAGCTCCTGGGACTGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR TCA 90 bp | GAGCTGAGCGTACCGCCCCCTGGTGGTAGGAAGGCAAAAGTGAGGCCAGCCCTAAGGGAGTTCTGCAGCTaGGGATGGCTGTCAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: ELSVPPPGGRKAKVRPALREFCS*GWLSVL Trigger: CAGAACTGACAGCCATCCTCAGCTGCAGAACTCCCT...TAGGGCTGGCCTCACTTTTGCCTTCCTACCACCAGGGGGCGGTACGCTCAGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR TCA 90 bp | GAGCTGAGCGTACCGCCCCCTGGTGGTAGGAAGGCAAAAGTGAGGCCAGCCCTAAGGCTGGCACTCCCATaGAGCCAGCCACATTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: ELSVPPPGGRKAKVRPALRLALP*SQPHFH Trigger: ATGGAAATGTGGCTGGCTTCATGGGAGTGCCAGCCT...TAGGGCTGGCCTCACTTTTGCCTTCCTACCACCAGGGGGCGGTACGCTCAGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR GCA 90 bp | TGTCAGTCCCAGGAGCTGAGCGTACCGCCCCCTGGTGGTAGGAAGGCAAAAGTGGGGAGTATGGGGACATaGATGGAGAGGGGATGCCCT | + |
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Preference number: 4 (lower is better) Translates to: CQSQELSVPPPGGRKAKVGSMGT*MERGCP Trigger: AGGGCATCCCCTCTCCATGCATGTCCCCATACTCCC...CACTTTTGCCTTCCTACCACCAGGGGGCGGTACGCTCAGCTCCTGGGACTGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CCA 90 bp | AGTCTGCACCCTCCTCCCATCTTCCTGGGCTCCCTGGACTTAGAAACAGTCTTTGGTCCTGCAGGTACTTaGCGGGCGGCTTGGCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SLHPPPIFLGSLDLETVFGPAGT*RAAWRA Trigger: AGCCCGCCAAGCCGCCCGCCAAGTACCTGCAGGACC...AAAGACTGTTTCTAAGTCCAGGGAGCCCAGGAAGATGGGAGGAGGGTGCAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR GCA 90 bp | AGTCTGCACCCTCCTCCCATCTTCCTGGGCTCCCTGGACTTAGAAACAGTCTTTGAAGGCTCAAAGCTGTaGCCTCCCAGGGCAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: SLHPPPIFLGSLDLETVFEGSKL*PPRAGG Trigger: CCCTCCTGCCCTGGGAGGGCACAGCTTTGAGCCTTC...AAAGACTGTTTCTAAGTCCAGGGAGCCCAGGAAGATGGGAGGAGGGTGCAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CCA 90 bp | TGTCAGTCCCAGGAGCTGAGCGTACCGCCCCCTGGTGGTAGGAAGGCAAAAGTGTCCAGCTCTTCCAGCTaGAACGTGCTGAAGGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: CQSQELSVPPPGGRKAKVSSSSS*NVLKVV Trigger: CACAACCTTCAGCACGTTCCAGCTGGAAGAGCTGGA...CACTTTTGCCTTCCTACCACCAGGGGGCGGTACGCTCAGCTCCTGGGACTGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CCA 90 bp | GAGCTGAGCGTACCGCCCCCTGGTGGTAGGAAGGCAAAAGTGAGGCCAGCCCTAACATTTCCATGGGAGTaGGAGTATGGGGACATGCAT | + |
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Preference number: 4 (lower is better) Translates to: ELSVPPPGGRKAKVRPALTFPWE*EYGDMH Trigger: ATGCATGTCCCCATACTCCCACTCCCATGGAAATGT...TAGGGCTGGCCTCACTTTTGCCTTCCTACCACCAGGGGGCGGTACGCTCAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CCA 90 bp | AGTCTGCACCCTCCTCCCATCTTCCTGGGCTCCCTGGACTTAGAAACAGTCTTTGTAGCTGGGGGAAGCTaGCAGCTTTGGAGGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SLHPPPIFLGSLDLETVFVAGGS*QLWRPS Trigger: AGAAGGCCTCCAAAGCTGCCAGCTTCCCCCAGCTAC...AAAGACTGTTTCTAAGTCCAGGGAGCCCAGGAAGATGGGAGGAGGGTGCAGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CCA 90 bp | AGATGGGCTAGGAGCAGGTCAGAGCAGGAAGAGAAGTGGACAGCTCAGTCTGTGCCAGCCACATTTCCATaGGAGTGGGAGTATGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: RWARSRSEQEEKWTAQSVPATFP*EWEYGD Trigger: GTCCCCATACTCCCACTCCCATGGAAATGTGGCTGG...CACAGACTGAGCTGTCCACTTCTCTTCCTGCTCTGACCTGCTCCTAGCCCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR GCA 90 bp | AGTCTGCACCCTCCTCCCATCTTCCTGGGCTCCCTGGACTTAGAAACAGTCTTTGGTTCCGGCGCTTCTTaGTCTTGGTCTTGGCCAACT | + |
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Preference number: 4 (lower is better) Translates to: SLHPPPIFLGSLDLETVFGSGAS*SWSWPT Trigger: AGTTGGCCAAGACCAAGAGCAAGAAGCGCCGGAACC...AAAGACTGTTTCTAAGTCCAGGGAGCCCAGGAAGATGGGAGGAGGGTGCAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CCA 90 bp | AGATGGGCTAGGAGCAGGTCAGAGCAGGAAGAGAAGTGGACAGCTCAGTCTGTGTCTTGCTCTTGGTCTTaGCCAACTCCATGGAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: RWARSRSEQEEKWTAQSVSCSWS*PTPWSR Trigger: CCGACTCCATGGAGTTGGCCAAGACCAAGAGCAAGA...CACAGACTGAGCTGTCCACTTCTCTTCCTGCTCTGACCTGCTCCTAGCCCATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CCA 90 bp | AGTCTGCACCCTCCTCCCATCTTCCTGGGCTCCCTGGACTTAGAAACAGTCTTTACCAGACCTGTACCCTaGCCTCAGTCAGGTCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: SLHPPPIFLGSLDLETVFTRPVP*PQSGLF Trigger: GAACAGACCTGACTGAGGCCAGGGTACAGGTCTGGT...AAAGACTGTTTCTAAGTCCAGGGAGCCCAGGAAGATGGGAGGAGGGTGCAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CCA 90 bp | TTTGATCGATGTCCAATATGGTTTTCATGGCATATCCCTGATCCCATGAAAGCAGGCTGCAGGGGAGGCTaGCACTCCCATGAAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FDRCPIWFSWHIPDPMKAGCRGG*HSHEAS Trigger: GCTGGCTTCATGGGAGTGCCAGCCTCCCCTGCAGCC...TGCTTTCATGGGATCAGGGATATGCCATGAAAACCATATTGGACATCGATCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CCA 90 bp | TTTGATCGATGTCCAATATGGTTTTCATGGCATATCCCTGATCCCATGAAAGCATCTTGGCCAACTCCATaGAGTCGGGGAGTCCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: FDRCPIWFSWHIPDPMKASWPTP*SRGVPG Trigger: CCCCGGGACTCCCCGACTCCATGGAGTTGGCCAAGA...TGCTTTCATGGGATCAGGGATATGCCATGAAAACCATATTGGACATCGATCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR GCA 90 bp | TTTGATCGATGTCCAATATGGTTTTCATGGCATATCCCTGATCCCATGAAAGCACATGGATGGAATAGATaGCAGGGTGGGCTGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: FDRCPIWFSWHIPDPMKAHGWNR*QGGLQG Trigger: CCCCTGCAGCCCACCCTGGCATCTATTCCATCCATG...TGCTTTCATGGGATCAGGGATATGCCATGAAAACCATATTGGACATCGATCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CCA 90 bp | TTTGATCGATGTCCAATATGGTTTTCATGGCATATCCCTGATCCCATGAAAGCAGTATGGGGACATGCATaGAGAGGGGATGCCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FDRCPIWFSWHIPDPMKAVWGHA*RGDALW Trigger: CCAGAGGGCATCCCCTCTCCATGCATGTCCCCATAC...TGCTTTCATGGGATCAGGGATATGCCATGAAAACCATATTGGACATCGATCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR TCA 90 bp | TTTGATCGATGTCCAATATGGTTTTCATGGCATATCCCTGATCCCATGAAAGCAGGGCTTCATCCTGAGTaGAACGAGGCTTGGGGACTT | + |
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Preference number: 4 (lower is better) Translates to: FDRCPIWFSWHIPDPMKAGLHPE*NEAWGL Trigger: AAGTCCCCAAGCCTCGTTTCACTCAGGATGAAGCCC...TGCTTTCATGGGATCAGGGATATGCCATGAAAACCATATTGGACATCGATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR TCA 90 bp | TTTGATCGATGTCCAATATGGTTTTCATGGCATATCCCTGATCCCATGAAAGCACTTTGGGCTTCATCCTaGGTGAAACGAGGCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: FDRCPIWFSWHIPDPMKALWASS*VKRGLG Trigger: CCCCAAGCCTCGTTTCACTCAGGATGAAGCCCAAAG...TGCTTTCATGGGATCAGGGATATGCCATGAAAACCATATTGGACATCGATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CCA 90 bp | TTTGATCGATGTCCAATATGGTTTTCATGGCATATCCCTGATCCCATGAAAGCACAATCCACTGGTAGCTaGGGGAAGCTGGCAGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: FDRCPIWFSWHIPDPMKAQSTGS*GKLAAL Trigger: CAAAGCTGCCAGCTTCCCCCAGCTACCAGTGGATTG...TGCTTTCATGGGATCAGGGATATGCCATGAAAACCATATTGGACATCGATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CCA 90 bp | TTTGATCGATGTCCAATATGGTTTTCATGGCATATCCCTGATCCCATGAAAGCAGGCGCTTCTTGCTCTTaGTCTTGGCCAACTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: FDRCPIWFSWHIPDPMKAGASCS*SWPTPW Trigger: CCATGGAGTTGGCCAAGACCAAGAGCAAGAAGCGCC...TGCTTTCATGGGATCAGGGATATGCCATGAAAACCATATTGGACATCGATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CCA 90 bp | TTTGATCGATGTCCAATATGGTTTTCATGGCATATCCCTGATCCCATGAAAGCATTCCAGATCCTGGACTaGGCCACAGGGAGTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: FDRCPIWFSWHIPDPMKAFQILD*ATGSSA Trigger: TGCAGAACTCCCTGTGGCCCAGTCCAGGATCTGGAA...TGCTTTCATGGGATCAGGGATATGCCATGAAAACCATATTGGACATCGATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CCA 90 bp | TTTGATCGATGTCCAATATGGTTTTCATGGCATATCCCTGATCCCATGAAAGCAGATGGCTGTCAGTTCTaGGCAGTACGGAGATGTCAT | + |
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Preference number: 4 (lower is better) Translates to: FDRCPIWFSWHIPDPMKADGCQF*AVRRCH Trigger: ATGACATCTCCGTACTGCCCAGAACTGACAGCCATC...TGCTTTCATGGGATCAGGGATATGCCATGAAAACCATATTGGACATCGATCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS CCA 90 bp | TGGCCCGAGGTCCTGCAGGTACTTGGCGGGCGGCTTGGCGGGCTCTaGGAGGTAGGGTTCCAGGGGCCCACAGGCCGGGAAGCGGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: WPEVLQVLGGRLGGL*EVGFQGPTGREAAQ Trigger: CTGAGCCGCTTCCCGGCCTGTGGGCCCCTGGAACCCTACCTCCCAGAGCCCGCCAAGCCGCCCGCCAAGTACCTGCAGGACCTCGGGCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS TCA 90 bp | CCTTCTCCTCGGCTTCCGCGGAGCCCTCGTAGAAGTGGCCGCCGTTaGGCACCGGGCCTGGCCCGAGGTCCTGCAGGTACTTGGCGGGCG | + |
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Preference number: 5 (lower is better) Translates to: PSPRLPRSPRRSGRR*APGLARGPAGTWRA Trigger: CGCCCGCCAAGTACCTGCAGGACCTCGGGCCAGGCCCGGTGCTCAACGGCGGCCACTTCTACGAGGGCTCCGCGGAAGCCGAGGAGAAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS CCA 90 bp | CGTCCCTGGGACCCCCTCGGCAATCCACTGGTAGCTGGGGGAAGCTaGCAGCTTTGGAGGCCTTCTCCTCGGCTTCCGCGGAGCCCTCGT | + |
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Preference number: 5 (lower is better) Translates to: RPWDPLGNPLVAGGS*QLWRPSPRLPRSPR Trigger: ACGAGGGCTCCGCGGAAGCCGAGGAGAAGGCCTCCAAAGCTGCCAGCTTCCCCCAGCTACCAGTGGATTGCCGAGGGGGTCCCAGGGACG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CAA 90 bp | GAGCTGAGCGTACCGCCCCCTGGTGGTAGGAAGGCAAAAGTGAGGCCAGCCCTAAGGTCCTGCAGGTACTaGGCGGGCGGCTTGGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: ELSVPPPGGRKAKVRPALRSCRY*AGGLAG Trigger: GCCCGCCAAGCCGCCCGCCAAGTACCTGCAGGACCT...TAGGGCTGGCCTCACTTTTGCCTTCCTACCACCAGGGGGCGGTACGCTCAGCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS CCA 90 bp | TTAGAGGGTCCGTCCCTGGGACCCCCTCGGCAATCCACTGGTAGCTaGGGGAAGCTGGCAGCTTTGGAGGCCTTCTCCTCGGCTTCCGCG | + |
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Preference number: 5 (lower is better) Translates to: LEGPSLGPPRQSTGS*GKLAALEAFSSASA Trigger: CGCGGAAGCCGAGGAGAAGGCCTCCAAAGCTGCCAGCTTCCCCCAGCTACCAGTGGATTGCCGAGGGGGTCCCAGGGACGGACCCTCTAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS CCA 90 bp | TTGTGCGGTTCCGGCGCTTCTTGCTCTTGGTCTTGGCCAACTCCATaGAGTCGGGGAGTCCCGGGGAAAGAGGGACGCTCAGGCTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: LCGSGASCSWSWPTP*SRGVPGKEGRSGWP Trigger: TGGCCAGCCTGAGCGTCCCTCTTTCCCCGGGACTCCCCGACTCCATGGAGTTGGCCAAGACCAAGAGCAAGAAGCGCCGGAACCGCACAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS-3UTR CAA 90 bp | GAGCTGAGCGTACCGCCCCCTGGTGGTAGGAAGGCAAAAGTGAGGCCAGCCCTACGGCGCTTCTTGCTCTaGGTCTTGGCCAACTCCATG | + |
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Preference number: 5 (lower is better) Translates to: ELSVPPPGGRKAKVRPALRRFLL*VLANSM Trigger: CATGGAGTTGGCCAAGACCAAGAGCAAGAAGCGCCG...TAGGGCTGGCCTCACTTTTGCCTTCCTACCACCAGGGGGCGGTACGCTCAGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS CCA 90 bp | TGGCACTCCCATGAAGCCAGCCACATTTCCATGGGAGTGGGAGTATaGGGACATGCATGGAGAGGGGATGCCCTCTGGAGACATGAGACA | + |
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Preference number: 5 (lower is better) Translates to: WHSHEASHISMGVGV*GHAWRGDALWRHET Trigger: TGTCTCATGTCTCCAGAGGGCATCCCCTCTCCATGCATGTCCCCATACTCCCACTCCCATGGAAATGTGGCTGGCTTCATGGGAGTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS TCA 72 bp | CGGCTTCCGCGGAGCCCTCGTAGAAGTGGCCGCCGTTaGGCACCGGGCCTGGCCCGAGGTCCTGCAGGTACT | + |
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Preference number: 6 (lower is better) Translates to: RLPRSPRRSGRR*APGLARGPAGT Trigger: AGTACCTGCAGGACCTCGGGCCAGGCCCGGTGCTCAACGGCGGCCACTTCTACGAGGGCTCCGCGGAAGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS CCA 72 bp | CCGTCCCTGGGACCCCCTCGGCAATCCACTGGTAGCTaGGGGAAGCTGGCAGCTTTGGAGGCCTTCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: PSLGPPRQSTGS*GKLAALEAFSS Trigger: CGAGGAGAAGGCCTCCAAAGCTGCCAGCTTCCCCCAGCTACCAGTGGATTGCCGAGGGGGTCCCAGGGACGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS CCA 72 bp | AGGTTGTGCGGTTCCGGCGCTTCTTGCTCTTGGTCTTaGCCAACTCCATGGAGTCGGGGAGTCCCGGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: RLCGSGASCSWS*PTPWSRGVPGK Trigger: TTTCCCCGGGACTCCCCGACTCCATGGAGTTGGCCAAGACCAAGAGCAAGAAGCGCCGGAACCGCACAACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS CCA 72 bp | GGCACTCCCATGAAGCCAGCCACATTTCCATGGGAGTaGGAGTATGGGGACATGCATGGAGAGGGGATGCCC | + |
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Preference number: 6 (lower is better) Translates to: GTPMKPATFPWE*EYGDMHGEGMP Trigger: GGGCATCCCCTCTCCATGCATGTCCCCATACTCCCACTCCCATGGAAATGTGGCTGGCTTCATGGGAGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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| CDS CCA 72 bp | CACATTTCCATGGGAGTGGGAGTATGGGGACATGCATaGAGAGGGGATGCCCTCTGGAGACATGAGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: HISMGVGVWGHA*RGDALWRHETG Trigger: CCCTGTCTCATGTCTCCAGAGGGCATCCCCTCTCCATGCATGTCCCCATACTCCCACTCCCATGGAAATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014747.3 |
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