Pregenerated sensors for ALX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036602Ensembl transcript IDs: ENSMUST00000040859.6, ENSMUST00000167156.9, ENSMUST00000217946.2, ENSMUST00000218282.2, ENSMUST00000218681.2, ENSMUST00000219194.2
Found 209 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATTGGCGGTGTGCTCCTTGGCCTTCATTCTCAGAACAGCGATACTaGAAGACCTCCTTTCAAACTCCGGCTTTGTTTCAAATGCGTGTC | + |
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Preference number: 1 (lower is better) Translates to: YWRCAPWPSFSEQRY*KTSFQTPALFQMRV Trigger: GACACGCATTTGAAACAAAGCCGGAGTTTGAAAGGAGGTCTTCCAGTATCGCTGTTCTGAGAATGAAGGCCAAGGAGCACACCGCCAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
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| 3UTR GCA 90 bp | AGCGATACTGGAAGACCTCCTTTCAAACTCCGGCTTTGTTTCAAATaGGTGTCCGTTGGTAGCTCCAGTGAGAAGAGAGTCAGTGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: SDTGRPPFKLRLCFK*VSVGSSSEKRVSEK Trigger: TTTTTCACTGACTCTCTTCTCACTGGAGCTACCAACGGACACGCATTTGAAACAAAGCCGGAGTTTGAAAGGAGGTCTTCCAGTATCGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
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| 3UTR CCA 90 bp | GTACTGTATGTTACATGGCCCATGAAATATTGGCGGTGTGCTCCTTaGCCTTCATTCTCAGAACAGCGATACTGGAAGACCTCCTTTCAA | + |
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Preference number: 1 (lower is better) Translates to: VLYVTWPMKYWRCAP*PSFSEQRYWKTSFQ Trigger: TTGAAAGGAGGTCTTCCAGTATCGCTGTTCTGAGAATGAAGGCCAAGGAGCACACCGCCAATATTTCATGGGCCATGTAACATACAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
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| 3UTR TCA 90 bp | AAAATGCTTAAGGCACAGAGTGTCAAGGCCAAACAGGCATGCATTTaGACATGCATAGGCCCACAAAACAAACATAAATTCCAATCTGTT | + |
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Preference number: 1 (lower is better) Translates to: KMLKAQSVKAKQACI*TCIGPQNKHKFQSV Trigger: AACAGATTGGAATTTATGTTTGTTTTGTGGGCCTATGCATGTTCAAATGCATGCCTGTTTGGCCTTGACACTCTGTGCCTTAAGCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR CCA 90 bp | ACTTTAAATCATACGCGAATACTTCAGTTGTCACCTTTAACCACATaGTTGCAAGAAACTGTGCCCAGATATCCATGCAAATACAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: TLNHTRILQLSPLTT*LQETVPRYPCKYRA Trigger: TGCTCTGTATTTGCATGGATATCTGGGCACAGTTTCTTGCAACCATGTGGTTAAAGGTGACAACTGAAGTATTCGCGTATGATTTAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR CCA 90 bp | ACTAATGAGTTCTCAGTTTTAATCACAAAATTGCAGTCTGCCTGCTaGCCTCTTCAATTGAAAGTTGGATTTATAAATCCTGTCCAGTTG | + |
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Preference number: 1 (lower is better) Translates to: TNEFSVLITKLQSAC*PLQLKVGFINPVQL Trigger: CAACTGGACAGGATTTATAAATCCAACTTTCAATTGAAGAGGCCAGCAGGCAGACTGCAATTTTGTGATTAAAACTGAGAACTCATTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR GCA 90 bp | TTTACTAATGAGTTCTCAGTTTTAATCACAAAATTGCAGTCTGCCTaGTGGCCTCTTCAATTGAAAGTTGGATTTATAAATCCTGTCCAG | + |
|
Preference number: 1 (lower is better) Translates to: FTNEFSVLITKLQSA*WPLQLKVGFINPVQ Trigger: CTGGACAGGATTTATAAATCCAACTTTCAATTGAAGAGGCCAGCAGGCAGACTGCAATTTTGTGATTAAAACTGAGAACTCATTAGTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR CCA 90 bp | CCGTATATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTaGTATCCTTTAAATACGAGAAATAAGAATGTTTTACTTTGCTAT | + |
|
Preference number: 1 (lower is better) Translates to: PYILTFSPSTHSSLL*YPLNTRNKNVLLCY Trigger: ATAGCAAAGTAAAACATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGATATACGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCGGCTTTGTTTCAAATGCGTGTCCGTTGGTAGCTCCAGTGAGAAGAGAGTCGAGAGTAAGGTGTCATaGAGGAGGACGCGTCACGTG | + |
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Preference number: 2 (lower is better) Translates to: LRLCFKCVSVGSSSEKRVESKVS*RRTRHV Trigger: CACGTGACGCGTCCTCCTGCATGACACCTTACTCTC...GACTCTCTTCTCACTGGAGCTACCAACGGACACGCATTTGAAACAAAGCCGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTCAGAACAGCGATACTGGAAGACCTCCTTTCAAACTCCGGCTTTGTTTCAAGGCACGTGGCTGAACTaGTTCTGGTGGTTCGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: FSEQRYWKTSFQTPALFQGTWLN*FWWFEN Trigger: GTTTTCGAACCACCAGAATCAGTTCAGCCACGTGCC...TTGAAACAAAGCCGGAGTTTGAAAGGAGGTCTTCCAGTATCGCTGTTCTGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
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| 3UTR-3UTR CCA 90 bp | AGCATGCATGACGTAACCACAGAACCACCGCTAGCATTTCCTGCCCACAAATTGAGAGTCTGTGGAGGCTaGTGCATGGTAAACCTATTT | + |
|
Preference number: 2 (lower is better) Translates to: SMHDVTTEPPLAFPAHKLRVCGG*CMVNLF Trigger: AAATAGGTTTACCATGCACCAGCCTCCACAGACTCT...CAATTTGTGGGCAGGAAATGCTAGCGGTGGTTCTGTGGTTACGTCATGCATGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAGACCTCCTTTCAAACTCCGGCTTTGTTTCAAATGCGTGTCCGTTGGTAAAAACCCCGTATAACTaGAATCTGTCCGAGGCGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LEDLLSNSGFVSNACPLVKTPYN*NLSEAS Trigger: ACTCGCCTCGGACAGATTCCAGTTATACGGGGTTTT...TACCAACGGACACGCATTTGAAACAAAGCCGGAGTTTGAAAGGAGGTCTTCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
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| 3UTR CAA 90 bp | AGTACTGTATGTTACATGGCCCATGAAATATTGGCGGTGTGCTCCTaGGCCTTCATTCTCAGAACAGCGATACTGGAAGACCTCCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: STVCYMAHEILAVCS*AFILRTAILEDLLS Trigger: TGAAAGGAGGTCTTCCAGTATCGCTGTTCTGAGAATGAAGGCCAAGGAGCACACCGCCAATATTTCATGGGCCATGTAACATACAGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGTTGTCACCTTTAACCACATGGTTGCAAGAAACTGTGCCCAGATATCCACTGCAACAGAGTGTATaGCCATTGTGTCTTGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: LQLSPLTTWLQETVPRYPLQQSV*PLCLGA Trigger: GGCTCCAAGACACAATGGTCATACACTCTGTTGCAG...TGGATATCTGGGCACAGTTTCTTGCAACCATGTGGTTAAAGGTGACAACTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR-3UTR GCA 90 bp | TCAAACTCCGGCTTTGTTTCAAATGCGTGTCCGTTGGTAGCTCCAGTGAGAAGAGTCTGTGGAGGCTGGTaGATGGTAAACCTATTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: SNSGFVSNACPLVAPVRRVCGGW*MVNLFS Trigger: ACTAAATAGGTTTACCATGCACCAGCCTCCACAGAC...TCTTCTCACTGGAGCTACCAACGGACACGCATTTGAAACAAAGCCGGAGTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
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| 3UTR-3UTR GCA 90 bp | GCTAACGTTCACCGGAACCACATGAAGATCCTAACAGAGTACAAAGAGTCGATGGTCTGTGGAGGCTGGTaGATGGTAAACCTATTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: ANVHRNHMKILTEYKESMVCGGW*MVNLFS Trigger: ACTAAATAGGTTTACCATGCACCAGCCTCCACAGAC...CATCGACTCTTTGTACTCTGTTAGGATCTTCATGTGGTTCCGGTGAACGTTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR-3UTR CCA 90 bp | GCTAACGTTCACCGGAACCACATGAAGATCCTAACAGAGTACAAAGAGTCGATGTCATCTGAAAACACTTaGAATGTGACAGGGGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: ANVHRNHMKILTEYKESMSSENT*NVTGGR Trigger: CCTTCCCCCTGTCACATTCCAAGTGTTTTCAGATGA...CATCGACTCTTTGTACTCTGTTAGGATCTTCATGTGGTTCCGGTGAACGTTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR-3UTR CCA 90 bp | CTTCAGTTGTCACCTTTAACCACATGGTTGCAAGAAACTGTGCCCAGATATCCACTAAAACAGAGTCTGTaGAGGCTGGTGCATGGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: LQLSPLTTWLQETVPRYPLKQSL*RLVHGK Trigger: TTTACCATGCACCAGCCTCCACAGACTCTGTTTTAG...TGGATATCTGGGCACAGTTTCTTGCAACCATGTGGTTAAAGGTGACAACTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR-3UTR CCA 90 bp | TACTGGAAGACCTCCTTTCAAACTCCGGCTTTGTTTCAAATGCGTGTCCGTTGGTGTGAAAAAGGAAGTTaGCAGACGAATAAAGTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: YWKTSFQTPALFQMRVRWCEKGS*QTNKVL Trigger: CAAAACTTTATTCGTCTGCCAACTTCCTTTTTCACA...CCAACGGACACGCATTTGAAACAAAGCCGGAGTTTGAAAGGAGGTCTTCCAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
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| 3UTR-3UTR TCA 90 bp | AATAATAACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCTGCAACAGAGTGTATaGCCATTGTGTCTTGGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: NNNNYSCKLVSPYILTFSLQQSV*PLCLGA Trigger: GGCTCCAAGACACAATGGTCATACACTCTGTTGCAG...GCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTTATTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR CAA 90 bp | TTAAATAATAACAACTATTCATGTAAGCTGGTCTCACCGTATATCTaGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCT | + |
|
Preference number: 2 (lower is better) Translates to: LNNNNYSCKLVSPYI*TFSPSTHSSLLWYP Trigger: AGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTTATTATTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| 3UTR-3UTR CCA 90 bp | AATAATAACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCAGAGTCTGTGGAGGCTaGTGCATGGTAAACCTATTT | + |
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Preference number: 2 (lower is better) Translates to: NNNNYSCKLVSPYILTFSRVCGG*CMVNLF Trigger: AAATAGGTTTACCATGCACCAGCCTCCACAGACTCT...GCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTTATTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| 3UTR CAA 90 bp | TCACCGTATATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATaGTGGTATCCTTTAAATACGAGAAATAAGAATGTTTTACTTTGC | + |
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Preference number: 2 (lower is better) Translates to: SPYILTFSPSTHSSL*WYPLNTRNKNVLLC Trigger: GCAAAGTAAAACATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGATATACGGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| 3UTR CAA 90 bp | CGGGGTGTTTCCTCGTTTATCAGGTATCACTTTACAAGGGATTTCTaGTTATACAGAACAAGCATAAATCAATCTATCACAGAAGGATTT | + |
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Preference number: 2 (lower is better) Translates to: RGVSSFIRYHFTRDF*LYRTSINQSITEGF Trigger: AAATCCTTCTGTGATAGATTGATTTATGCTTGTTCTGTATAACAAGAAATCCCTTGTAAAGTGATACCTGATAAACGAGGAAACACCCCG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR GCA 72 bp | TGGAATCTGTCCGAGGCGAGTGAGAGTAAGGTGTCATaGAGGAGGACGCGTCACGTGGTAGCATGCATGACG | + |
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Preference number: 3 (lower is better) Translates to: WNLSEASESKVS*RRTRHVVACMT Trigger: CGTCATGCATGCTACCACGTGACGCGTCCTCCTGCATGACACCTTACTCTCACTCGCCTCGGACAGATTCCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
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| 3UTR GCA 72 bp | GGAAGACCTCCTTTCAAACTCCGGCTTTGTTTCAAATaGGTGTCCGTTGGTAGCTCCAGTGAGAAGAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: GRPPFKLRLCFK*VSVGSSSEKRV Trigger: GACTCTCTTCTCACTGGAGCTACCAACGGACACGCATTTGAAACAAAGCCGGAGTTTGAAAGGAGGTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
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| 3UTR GCA 72 bp | ACTGTATGTTACATGGCCCATGAAATATTGGCGGTGTaGTCCTTGGCCTTCATTCTCAGAACAGCGATACTG | + |
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Preference number: 3 (lower is better) Translates to: TVCYMAHEILAV*SLAFILRTAIL Trigger: CAGTATCGCTGTTCTGAGAATGAAGGCCAAGGAGCACACCGCCAATATTTCATGGGCCATGTAACATACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
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| 3UTR-3UTR CAA 90 bp | TTGCAGTCTGCCTGCTGGCCTCTTCAATTGAAAGTTGGATTTATAAATCCTGTCGTCTCACCGTATATCTaGACCTTTAGCCCTTCCACA | + |
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Preference number: 3 (lower is better) Translates to: LQSACWPLQLKVGFINPVVSPYI*TFSPST Trigger: TGTGGAAGGGCTAAAGGTCAAGATATACGGTGAGAC...GACAGGATTTATAAATCCAACTTTCAATTGAAGAGGCCAGCAGGCAGACTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR-3UTR CAA 90 bp | CTTCAGTTGTCACCTTTAACCACATGGTTGCAAGAAACTGTGCCCAGATATCCACTTGGAGCCAAAGAATaGAAAATGGCATTAGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: LQLSPLTTWLQETVPRYPLGAKE*KMALAL Trigger: GAGAGCTAATGCCATTTTCAATTCTTTGGCTCCAAG...TGGATATCTGGGCACAGTTTCTTGCAACCATGTGGTTAAAGGTGACAACTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR TCA 72 bp | ACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTaGCCTTTAGCCCTTCCACACACAGCAGCTTATTGT | + |
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Preference number: 3 (lower is better) Translates to: TTIHVSWSHRIS*PLALPHTAAYC Trigger: ACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| 3UTR TCA 72 bp | AAGGCACAGAGTGTCAAGGCCAAACAGGCATGCATTTaGACATGCATAGGCCCACAAAACAAACATAAATTC | + |
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Preference number: 3 (lower is better) Translates to: KAQSVKAKQACI*TCIGPQNKHKF Trigger: GAATTTATGTTTGTTTTGTGGGCCTATGCATGTTCAAATGCATGCCTGTTTGGCCTTGACACTCTGTGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR CCA 72 bp | CATACGCGAATACTTCAGTTGTCACCTTTAACCACATaGTTGCAAGAAACTGTGCCCAGATATCCATGCAAA | + |
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Preference number: 3 (lower is better) Translates to: HTRILQLSPLTT*LQETVPRYPCK Trigger: TTTGCATGGATATCTGGGCACAGTTTCTTGCAACCATGTGGTTAAAGGTGACAACTGAAGTATTCGCGTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR-3UTR CAA 90 bp | CTTCAGTTGTCACCTTTAACCACATGGTTGCAAGAAACTGTGCCCAGATATCCAACACACAGCAGCTTATaGTGGTATCCTTTAAATACG | + |
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Preference number: 3 (lower is better) Translates to: LQLSPLTTWLQETVPRYPTHSSL*WYPLNT Trigger: CGTATTTAAAGGATACCACAATAAGCTGCTGTGTGT...TGGATATCTGGGCACAGTTTCTTGCAACCATGTGGTTAAAGGTGACAACTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR-3UTR CAA 90 bp | GATCTGAGCCATTGGAAGTCATCTTCGCTTCAATTAATTGACTTTGCCTTTATGGTCTCACCGTATATCTaGACCTTTAGCCCTTCCACA | + |
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Preference number: 3 (lower is better) Translates to: DLSHWKSSSLQLIDFAFMVSPYI*TFSPST Trigger: TGTGGAAGGGCTAAAGGTCAAGATATACGGTGAGAC...CATAAAGGCAAAGTCAATTAATTGAAGCGAAGATGACTTCCAATGGCTCAGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR TCA 72 bp | AAGATCCTAACAGAGTACAAAGAGTCGATGTTGCTCTaGTCTGAGCCATTGGAAGTCATCTTCGCTTCAATT | + |
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Preference number: 3 (lower is better) Translates to: KILTEYKESMLL*SEPLEVIFASI Trigger: AATTGAAGCGAAGATGACTTCCAATGGCTCAGATCAGAGCAACATCGACTCTTTGTACTCTGTTAGGATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR-3UTR CAA 90 bp | GATCTGAGCCATTGGAAGTCATCTTCGCTTCAATTAATTGACTTTGCCTTTATGGTTTTAATCACAAAATaGCAGTCTGCCTGCTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: DLSHWKSSSLQLIDFAFMVLITK*QSACWP Trigger: AGGCCAGCAGGCAGACTGCAATTTTGTGATTAAAAC...CATAAAGGCAAAGTCAATTAATTGAAGCGAAGATGACTTCCAATGGCTCAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR-3UTR CAA 90 bp | AATAATAACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCACACACAGCAGCTTATaGTGGTATCCTTTAAATACG | + |
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Preference number: 3 (lower is better) Translates to: NNNNYSCKLVSPYILTFSTHSSL*WYPLNT Trigger: CGTATTTAAAGGATACCACAATAAGCTGCTGTGTGT...GCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTTATTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| 3UTR GCA 72 bp | GAGTTCTCAGTTTTAATCACAAAATTGCAGTCTGCCTaGTGGCCTCTTCAATTGAAAGTTGGATTTATAAAT | + |
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Preference number: 3 (lower is better) Translates to: EFSVLITKLQSA*WPLQLKVGFIN Trigger: ATTTATAAATCCAACTTTCAATTGAAGAGGCCAGCAGGCAGACTGCAATTTTGTGATTAAAACTGAGAACTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| 3UTR CCA 72 bp | TTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTaGTATCCTTTAAATACGAGAAATAAGAATGTTTTA | + |
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Preference number: 3 (lower is better) Translates to: LTFSPSTHSSLL*YPLNTRNKNVL Trigger: TAAAACATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| 3UTR CCA 72 bp | TTCTCAGTTTTAATCACAAAATTGCAGTCTGCCTGCTaGCCTCTTCAATTGAAAGTTGGATTTATAAATCCT | + |
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Preference number: 3 (lower is better) Translates to: FSVLITKLQSAC*PLQLKVGFINP Trigger: AGGATTTATAAATCCAACTTTCAATTGAAGAGGCCAGCAGGCAGACTGCAATTTTGTGATTAAAACTGAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| CDS-3UTR GCA 90 bp | GCTAACGTTCACCGGAACCACATGAAGATCCTAACAGAGTACAAAGAGTCGATGAGCGGCCCGAAGGCCTaGACGCATTTGCCAGCCGTC | + |
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Preference number: 4 (lower is better) Translates to: ANVHRNHMKILTEYKESMSGPKA*THLPAV Trigger: GACGGCTGGCAAATGCGTGCAGGCCTTCGGGCCGCT...CATCGACTCTTTGTACTCTGTTAGGATCTTCATGTGGTTCCGGTGAACGTTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| CDS-3UTR TCA 90 bp | CCGTATATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTCACGCTGCTGTCCTaGCAGGGCGAAGTCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: PYILTFSPSTHSSLLWYPFTLLS*QGEVLS Trigger: GGACAGGACTTCGCCCTGTCAGGACAGCAGCGTGAA...AGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGATATACGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS-3UTR GCA 90 bp | ATGCATGACGTAACCACAGAACCACCGCTAGCATTTCCTGCCCACAAATTGTTCAGCGTCTCCATAACGTaGTCCAACGCGCCTCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: MHDVTTEPPLAFPAHKLFSVSIT*SNAPPV Trigger: CACAGGAGGCGCGTTGGAGCACGTTATGGAGACGCT...GAACAATTTGTGGGCAGGAAATGCTAGCGGTGGTTCTGTGGTTACGTCATGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
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| CDS-3UTR GCA 90 bp | GCTAACGTTCACCGGAACCACATGAAGATCCTAACAGAGTACAAAGAGTCGATGAGGCCTGCACGCATTTaGCAGCCGTCGCTTTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: ANVHRNHMKILTEYKESMRPARI*QPSLCR Trigger: ACGGCAAAGCGACGGCTGGCAAATGCGTGCAGGCCT...CATCGACTCTTTGTACTCTGTTAGGATCTTCATGTGGTTCCGGTGAACGTTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR GCA 90 bp | AACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCAGCGGCCCGAAGGCCTaGACGCATTTGCCAGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: NNYSCKLVSPYILTFSPSSGPKA*THLPAV Trigger: GACGGCTGGCAAATGCGTGCAGGCCTTCGGGCCGCT...GGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR TCA 90 bp | AACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCGGACCCTGGCCTCAGTaGGCTCCGTTCTCAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NNYSCKLVSPYILTFSPSGPWPQ*APFSGQ Trigger: TTGCCCTGAGAACGGAGCTCACTGAGGCCAGGGTCC...GGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAGGACCCTGGCCTCAGTaGGCTCCGTTCTCAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TFSPSTHSSLLWYPLNTRGPWPQ*APFSGQ Trigger: TTGCCCTGAGAACGGAGCTCACTGAGGCCAGGGTCC...TCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCAGAACAGCGATACTGGAAGACCTCCTTTCAAACTCCGGCTTTGTTTCAAAGGCCTGCACGCATTTaGCAGCCGTCGCTTTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FSEQRYWKTSFQTPALFQRPARI*QPSLCR Trigger: ACGGCAAAGCGACGGCTGGCAAATGCGTGCAGGCCT...TTGAAACAAAGCCGGAGTTTGAAAGGAGGTCTTCCAGTATCGCTGTTCTGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
||
| CDS-3UTR GCA 90 bp | ATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATAGCGGCCCGAAGGCCTaGACGCATTTGCCAGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILTFSPSTHSSLLWYPLNSGPKA*THLPAV Trigger: GACGGCTGGCAAATGCGTGCAGGCCTTCGGGCCGCT...ATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR TCA 90 bp | AACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCACATTCACGCTGCTGTCCTaGCAGGGCGAAGTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NYSCKLVSPYILTFSPSTFTLLS*QGEVLS Trigger: GGACAGGACTTCGCCCTGTCAGGACAGCAGCGTGAA...TGTGGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR TCA 90 bp | AACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCTTCACGCTGCTGTCCTaGCAGGGCGAAGTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NNYSCKLVSPYILTFSPSFTLLS*QGEVLS Trigger: GGACAGGACTTCGCCCTGTCAGGACAGCAGCGTGAA...GGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR TCA 90 bp | CCGTATATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTCTATTCAGCTCGGTGTaGAGGGGCTGTCCTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PYILTFSPSTHSSLLWYPLFSSV*RGCPST Trigger: AGTGGAAGGACAGCCCCTTCACACCGAGCTGAATAG...AGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGATATACGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | AACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCACAAGGCCTGCACGCATTTaGCAGCCGTCGCTTTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: NYSCKLVSPYILTFSPSTRPARI*QPSLCR Trigger: ACGGCAAAGCGACGGCTGGCAAATGCGTGCAGGCCT...TGTGGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAGCGGCCCGAAGGCCTaGACGCATTTGCCAGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSPSTHSSLLWYPLNTRNSGPKA*THLPAV Trigger: GACGGCTGGCAAATGCGTGCAGGCCTTCGGGCCGCT...ATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | GCTAACGTTCACCGGAACCACATGAAGATCCTAACAGAGTACAAAGAGTCGATGGAGAGTAAGGTGTCATaGAGGAGGACGCGTCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: ANVHRNHMKILTEYKESMESKVS*RRTRHV Trigger: CACGTGACGCGTCCTCCTGCATGACACCTTACTCTC...CATCGACTCTTTGTACTCTGTTAGGATCTTCATGTGGTTCCGGTGAACGTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR TCA 90 bp | TTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATGGACCCTGGCCTCAGTaGGCTCCGTTCTCAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSPSTHSSLLWYPLNTRNGPWPQ*APFSGQ Trigger: TTGCCCTGAGAACGGAGCTCACTGAGGCCAGGGTCC...ATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR TCA 90 bp | CCGTATATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTGGCACGTGGCTGAACTaGTTCTGGTGGTTCGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PYILTFSPSTHSSLLWYPGTWLN*FWWFEN Trigger: GTTTTCGAACCACCAGAATCAGTTCAGCCACGTGCC...AGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGATATACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | GCTAACGTTCACCGGAACCACATGAAGATCCTAACAGAGTACAAAGAGTCGATGCCAACGCGCCTCCTGTaGCCATGTAAAAGTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ANVHRNHMKILTEYKESMPTRLL*PCKSHC Trigger: ACAGTGACTTTTACATGGGCACAGGAGGCGCGTTGG...CATCGACTCTTTGTACTCTGTTAGGATCTTCATGTGGTTCCGGTGAACGTTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR GCA 90 bp | ACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAGCGTCTCCATAACGTaGTCCAACGCGCCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TFSPSTHSSLLWYPLNTRSVSIT*SNAPPV Trigger: CACAGGAGGCGCGTTGGAGCACGTTATGGAGACGCT...TCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CCA 90 bp | GCTAACGTTCACCGGAACCACATGAAGATCCTAACAGAGTACAAAGAGTCGATGTGGCCCATGAAATATTaGCGGTGTGCTCCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ANVHRNHMKILTEYKESMWPMKY*RCAPWP Trigger: AGGCCAAGGAGCACACCGCCAATATTTCATGGGCCA...CATCGACTCTTTGTACTCTGTTAGGATCTTCATGTGGTTCCGGTGAACGTTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR CCA 90 bp | CCGTATATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTGGCCCATGAAATATTaGCGGTGTGCTCCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PYILTFSPSTHSSLLWYPWPMKY*RCAPWP Trigger: AGGCCAAGGAGCACACCGCCAATATTTCATGGGCCA...AGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGATATACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR TCA 90 bp | TTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATTTCACGCTGCTGTCCTaGCAGGGCGAAGTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSPSTHSSLLWYPLNTRNFTLLS*QGEVLS Trigger: GGACAGGACTTCGCCCTGTCAGGACAGCAGCGTGAA...ATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR TCA 90 bp | AACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCCTATTCAGCTCGGTGTaGAGGGGCTGTCCTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: NNYSCKLVSPYILTFSPSLFSSV*RGCPST Trigger: AGTGGAAGGACAGCCCCTTCACACCGAGCTGAATAG...GGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGACTATTCAGCTCGGTGTaGAGGGGCTGTCCTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TFSPSTHSSLLWYPLNTRLFSSV*RGCPST Trigger: AGTGGAAGGACAGCCCCTTCACACCGAGCTGAATAG...TCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATGGACCCTGGCCTCAGTaGGCTCCGTTCTCAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PSTHSSLLWYPLNTRNKNGPWPQ*APFSGQ Trigger: TTGCCCTGAGAACGGAGCTCACTGAGGCCAGGGTCC...ATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | TCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATGTTAGCGGCCCGAAGGCCTaGACGCATTTGCCAGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: STHSSLLWYPLNTRNKNVSGPKA*THLPAV Trigger: GACGGCTGGCAAATGCGTGCAGGCCTTCGGGCCGCT...AACATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | ACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAGAGAGTAAGGTGTCATaGAGGAGGACGCGTCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: TFSPSTHSSLLWYPLNTRESKVS*RRTRHV Trigger: CACGTGACGCGTCCTCCTGCATGACACCTTACTCTC...TCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR TCA 90 bp | TCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATGTTGGACCCTGGCCTCAGTaGGCTCCGTTCTCAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: STHSSLLWYPLNTRNKNVGPWPQ*APFSGQ Trigger: TTGCCCTGAGAACGGAGCTCACTGAGGCCAGGGTCC...AACATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAGCGTCTCCATAACGTaGTCCAACGCGCCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSPSTHSSLLWYPLNTRNSVSIT*SNAPPV Trigger: CACAGGAGGCGCGTTGGAGCACGTTATGGAGACGCT...ATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | ACTGGAAGACCTCCTTTCAAACTCCGGCTTTGTTTCAAATGCGTGTCCGTTGGTTGCTGCTGGATACATTaGTGTCACATTTGTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TGRPPFKLRLCFKCVSVGCCWIH*CHICPQ Trigger: TTGGGGACAAATGTGACAGCAATGTATCCAGCAGCA...ACCAACGGACACGCATTTGAAACAAAGCCGGAGTTTGAAAGGAGGTCTTCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
||
| CDS-3UTR CCA 90 bp | CCGTATATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTGTCACTGTTTTTACTTaGCGGGCTCTTCAGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PYILTFSPSTHSSLLWYPVTVFT*RALQGK Trigger: TTTGCCCTGAAGAGCCCGCCAAGTAAAAACAGTGAC...AGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGATATACGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CCA 90 bp | AACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCACATGGCCCATGAAATATTaGCGGTGTGCTCCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NYSCKLVSPYILTFSPSTWPMKY*RCAPWP Trigger: AGGCCAAGGAGCACACCGCCAATATTTCATGGGCCA...TGTGGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CCA 90 bp | AACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCTGGCCCATGAAATATTaGCGGTGTGCTCCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NNYSCKLVSPYILTFSPSWPMKY*RCAPWP Trigger: AGGCCAAGGAGCACACCGCCAATATTTCATGGGCCA...GGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR TCA 90 bp | ATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATGGCACGTGGCTGAACTaGTTCTGGTGGTTCGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILTFSPSTHSSLLWYPLNGTWLN*FWWFEN Trigger: GTTTTCGAACCACCAGAATCAGTTCAGCCACGTGCC...ATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | ATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATCCAACGCGCCTCCTGTaGCCATGTAAAAGTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILTFSPSTHSSLLWYPLNPTRLL*PCKSHC Trigger: ACAGTGACTTTTACATGGGCACAGGAGGCGCGTTGG...ATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATAGCGTCTCCATAACGTaGTCCAACGCGCCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSTHSSLLWYPLNTRNKNSVSIT*SNAPPV Trigger: CACAGGAGGCGCGTTGGAGCACGTTATGGAGACGCT...ATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | AACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCTGCCAGCCGTCGCTTTaGCGTAAAAGGACTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: NNYSCKLVSPYILTFSPSCQPSL*RKRTHC Trigger: ACAATGAGTCCTTTTACGGCAAAGCGACGGCTGGCA...GGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | AATAATAACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCAGGCCTGCACGCATTTaGCAGCCGTCGCTTTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: NNNNYSCKLVSPYILTFSRPARI*QPSLCR Trigger: ACGGCAAAGCGACGGCTGGCAAATGCGTGCAGGCCT...GCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTTATTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | GCTAACGTTCACCGGAACCACATGAAGATCCTAACAGAGTACAAAGAGTCGATGTGCTGCTGGATACATTaGTGTCACATTTGTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ANVHRNHMKILTEYKESMCCWIH*CHICPQ Trigger: TTGGGGACAAATGTGACAGCAATGTATCCAGCAGCA...CATCGACTCTTTGTACTCTGTTAGGATCTTCATGTGGTTCCGGTGAACGTTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR GCA 90 bp | TTTACTAATGAGTTCTCAGTTTTAATCACAAAATTGCAGTCTGCCTGCTGGCCTGAGAGTAAGGTGTCATaGAGGAGGACGCGTCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: FTNEFSVLITKLQSACWPESKVS*RRTRHV Trigger: CACGTGACGCGTCCTCCTGCATGACACCTTACTCTC...AGGCCAGCAGGCAGACTGCAATTTTGTGATTAAAACTGAGAACTCATTAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR GCA 90 bp | TTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATGAGAGTAAGGTGTCATaGAGGAGGACGCGTCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSPSTHSSLLWYPLNTRNESKVS*RRTRHV Trigger: CACGTGACGCGTCCTCCTGCATGACACCTTACTCTC...ATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | ACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGACGGCTTTGTTTCAAATaGGTGTCCGTTGGTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TFSPSTHSSLLWYPLNTRRLCFK*VSVGSS Trigger: GGAGCTACCAACGGACACGCATTTGAAACAAAGCCG...TCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | TTGCAGTCTGCCTGCTGGCCTCTTCAATTGAAAGTTGGATTTATAAATCCTGTCCGGCTTTGTTTCAAATaGGTGTCCGTTGGTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQSACWPLQLKVGFINPVRLCFK*VSVGSS Trigger: GGAGCTACCAACGGACACGCATTTGAAACAAAGCCG...GACAGGATTTATAAATCCAACTTTCAATTGAAGAGGCCAGCAGGCAGACTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR GCA 90 bp | AACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCACACGGCTTTGTTTCAAATaGGTGTCCGTTGGTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NYSCKLVSPYILTFSPSTRLCFK*VSVGSS Trigger: GGAGCTACCAACGGACACGCATTTGAAACAAAGCCG...TGTGGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | AACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCCGGCTTTGTTTCAAATaGGTGTCCGTTGGTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NNYSCKLVSPYILTFSPSRLCFK*VSVGSS Trigger: GGAGCTACCAACGGACACGCATTTGAAACAAAGCCG...GGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CCA 90 bp | ATGCATGACGTAACCACAGAACCACCGCTAGCATTTCCTGCCCACAAATTGTTCTACGTGGCAGCGAAATaGCTTTTAGCTTGCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: MHDVTTEPPLAFPAHKLFYVAAK*LLACCI Trigger: AATACAGCAAGCTAAAAGCCATTTCGCTGCCACGTA...GAACAATTTGTGGGCAGGAAATGCTAGCGGTGGTTCTGTGGTTACGTCATGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATCTATTCAGCTCGGTGTaGAGGGGCTGTCCTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PSTHSSLLWYPLNTRNKNLFSSV*RGCPST Trigger: AGTGGAAGGACAGCCCCTTCACACCGAGCTGAATAG...ATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | TTTACTAATGAGTTCTCAGTTTTAATCACAAAATTGCAGTCTGCCTGCTGGCCTCCAACGCGCCTCCTGTaGCCATGTAAAAGTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FTNEFSVLITKLQSACWPPTRLL*PCKSHC Trigger: ACAGTGACTTTTACATGGGCACAGGAGGCGCGTTGG...AGGCCAGCAGGCAGACTGCAATTTTGTGATTAAAACTGAGAACTCATTAGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR GCA 90 bp | TTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATCCAACGCGCCTCCTGTaGCCATGTAAAAGTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSPSTHSSLLWYPLNTRNPTRLL*PCKSHC Trigger: ACAGTGACTTTTACATGGGCACAGGAGGCGCGTTGG...ATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | TACTGGAAGACCTCCTTTCAAACTCCGGCTTTGTTTCAAATGCGTGTCCGTTGGAAATGGCTTTTAGCTTaGTGTATTTGGCCGTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: YWKTSFQTPALFQMRVRWKWLLA*CIWPYR Trigger: ACGATACGGCCAAATACAGCAAGCTAAAAGCCATTT...CCAACGGACACGCATTTGAAACAAAGCCGGAGTTTGAAAGGAGGTCTTCCAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
||
| CDS-3UTR GCA 90 bp | ACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAGAAATATTGGCGGTGTaGTCCTTGGCCTTCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TFSPSTHSSLLWYPLNTREILAV*SLAFIL Trigger: GAGAATGAAGGCCAAGGAGCACACCGCCAATATTTC...TCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CCA 90 bp | AACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCGTCACTGTTTTTACTTaGCGGGCTCTTCAGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NNYSCKLVSPYILTFSPSVTVFT*RALQGK Trigger: TTTGCCCTGAAGAGCCCGCCAAGTAAAAACAGTGAC...GGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CCA 90 bp | GATCTGAGCCATTGGAAGTCATCTTCGCTTCAATTAATTGACTTTGCCTTTATGCAGTTCGCTCTTCTCTaGCATCCCTTTCACGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DLSHWKSSSLQLIDFAFMQFALL*HPFHGR Trigger: TCTCCCGTGAAAGGGATGCCAGAGAAGAGCGAACTG...CATAAAGGCAAAGTCAATTAATTGAAGCGAAGATGACTTCCAATGGCTCAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR CCA 90 bp | TTGCAGTCTGCCTGCTGGCCTCTTCAATTGAAAGTTGGATTTATAAATCCTGTCAAAACCCCGTATAACTaGAATCTGTCCGAGGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQSACWPLQLKVGFINPVKTPYN*NLSEAS Trigger: ACTCGCCTCGGACAGATTCCAGTTATACGGGGTTTT...GACAGGATTTATAAATCCAACTTTCAATTGAAGAGGCCAGCAGGCAGACTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR TCA 90 bp | TTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATGTCCTTCCACTTTGGTaGTTCCATAGTTCACGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSPSTHSSLLWYPLNTRNVLPLW*FHSSRC Trigger: GCAGCGTGAACTATGGAATCACCAAAGTGGAAGGAC...ATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATTGCCAGCCGTCGCTTTaGCGTAAAAGGACTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSPSTHSSLLWYPLNTRNCQPSL*RKRTHC Trigger: ACAATGAGTCCTTTTACGGCAAAGCGACGGCTGGCA...ATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | GCTAACGTTCACCGGAACCACATGAAGATCCTAACAGAGTACAAAGAGTCGATGAAATGGCTTTTAGCTTaGTGTATTTGGCCGTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: ANVHRNHMKILTEYKESMKWLLA*CIWPYR Trigger: ACGATACGGCCAAATACAGCAAGCTAAAAGCCATTT...CATCGACTCTTTGTACTCTGTTAGGATCTTCATGTGGTTCCGGTGAACGTTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR GCA 90 bp | CCGTATATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTAAATGGCTTTTAGCTTaGTGTATTTGGCCGTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: PYILTFSPSTHSSLLWYPKWLLA*CIWPYR Trigger: ACGATACGGCCAAATACAGCAAGCTAAAAGCCATTT...AGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGATATACGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | ATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATGAAATATTGGCGGTGTaGTCCTTGGCCTTCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILTFSPSTHSSLLWYPLNEILAV*SLAFIL Trigger: GAGAATGAAGGCCAAGGAGCACACCGCCAATATTTC...ATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATGTCACTGTTTTTACTTaGCGGGCTCTTCAGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ILTFSPSTHSSLLWYPLNVTVFT*RALQGK Trigger: TTTGCCCTGAAGAGCCCGCCAAGTAAAAACAGTGAC...ATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CCA 90 bp | TACTGGAAGACCTCCTTTCAAACTCCGGCTTTGTTTCAAATGCGTGTCCGTTGGTTAGCTTGCTGTATTTaGCCGTATCGTTCTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YWKTSFQTPALFQMRVRWLACCI*PYRSLF Trigger: AAAAAGAGAACGATACGGCCAAATACAGCAAGCTAA...CCAACGGACACGCATTTGAAACAAAGCCGGAGTTTGAAAGGAGGTCTTCCAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATAAAACCCCGTATAACTaGAATCTGTCCGAGGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILTFSPSTHSSLLWYPLNKTPYN*NLSEAS Trigger: ACTCGCCTCGGACAGATTCCAGTTATACGGGGTTTT...ATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| 3UTR CAA 72 bp | AACAACTATTCATGTAAGCTGGTCTCACCGTATATCTaGACCTTTAGCCCTTCCACACACAGCAGCTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: NNYSCKLVSPYI*TFSPSTHSSLL Trigger: CAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR TCA 90 bp | AATAATAACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCGGCACGTGGCTGAACTaGTTCTGGTGGTTCGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NNNNYSCKLVSPYILTFSGTWLN*FWWFEN Trigger: GTTTTCGAACCACCAGAATCAGTTCAGCCACGTGCC...GCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTTATTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR TCA 90 bp | TCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATGTTGGCACGTGGCTGAACTaGTTCTGGTGGTTCGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: STHSSLLWYPLNTRNKNVGTWLN*FWWFEN Trigger: GTTTTCGAACCACCAGAATCAGTTCAGCCACGTGCC...AACATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | AATAATAACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCAACGCGCCTCCTGTaGCCATGTAAAAGTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: NNNNYSCKLVSPYILTFSPTRLL*PCKSHC Trigger: ACAGTGACTTTTACATGGGCACAGGAGGCGCGTTGG...GCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTTATTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATTGCCAGCCGTCGCTTTaGCGTAAAAGGACTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSTHSSLLWYPLNTRNKNCQPSL*RKRTHC Trigger: ACAATGAGTCCTTTTACGGCAAAGCGACGGCTGGCA...ATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATGAAATATTGGCGGTGTaGTCCTTGGCCTTCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSPSTHSSLLWYPLNTRNEILAV*SLAFIL Trigger: GAGAATGAAGGCCAAGGAGCACACCGCCAATATTTC...ATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CCA 90 bp | CCGTATATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAGCTTGCTGTATTTaGCCGTATCGTTCTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PYILTFSPSTHSSLLWYPLACCI*PYRSLF Trigger: AAAAAGAGAACGATACGGCCAAATACAGCAAGCTAA...AGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGATATACGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CCA 90 bp | TTGCAGTCTGCCTGCTGGCCTCTTCAATTGAAAGTTGGATTTATAAATCCTGTCTACGTGGCAGCGAAATaGCTTTTAGCTTGCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: LQSACWPLQLKVGFINPVYVAAK*LLACCI Trigger: AATACAGCAAGCTAAAAGCCATTTCGCTGCCACGTA...GACAGGATTTATAAATCCAACTTTCAATTGAAGAGGCCAGCAGGCAGACTGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR CCA 90 bp | TTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAAACCCCGTATAACTaGAATCTGTCCGAGGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSPSTHSSLLWYPLNTRNKTPYN*NLSEAS Trigger: ACTCGCCTCGGACAGATTCCAGTTATACGGGGTTTT...ATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | TCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATGTTTGCCAGCCGTCGCTTTaGCGTAAAAGGACTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: STHSSLLWYPLNTRNKNVCQPSL*RKRTHC Trigger: ACAATGAGTCCTTTTACGGCAAAGCGACGGCTGGCA...AACATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATTCCAGTTCCTCCAGCTaGAAACTGGTAAAGGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FSPSTHSSLLWYPLNTRNSSSSS*KLVKVV Trigger: AACTACCTTTACCAGTTTGCAGCTGGAGGAACTGGA...ATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | TTTACTAATGAGTTCTCAGTTTTAATCACAAAATTGCAGTCTGCCTGCTGGCCTTCCAGTTCCTCCAGCTaGAAACTGGTAAAGGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FTNEFSVLITKLQSACWPSSSSS*KLVKVV Trigger: AACTACCTTTACCAGTTTGCAGCTGGAGGAACTGGA...AGGCCAGCAGGCAGACTGCAATTTTGTGATTAAAACTGAGAACTCATTAGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR GCA 90 bp | CCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATGAAATATTGGCGGTGTaGTCCTTGGCCTTCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSTHSSLLWYPLNTRNKNEILAV*SLAFIL Trigger: GAGAATGAAGGCCAAGGAGCACACCGCCAATATTTC...ATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CCA 90 bp | AACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCTCCTCTTTTTGCTGCTaGATACATTGCTGTCACATT | + |
|
Preference number: 4 (lower is better) Translates to: NNYSCKLVSPYILTFSPSSSFCC*IHCCHI Trigger: AATGTGACAGCAATGTATCCAGCAGCAAAAAGAGGA...GGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATTCCAGTTCCTCCAGCTaGAAACTGGTAAAGGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSTHSSLLWYPLNTRNKNSSSSS*KLVKVV Trigger: AACTACCTTTACCAGTTTGCAGCTGGAGGAACTGGA...ATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CCA 90 bp | TCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATGTTGTCACTGTTTTTACTTaGCGGGCTCTTCAGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: STHSSLLWYPLNTRNKNVVTVFT*RALQGK Trigger: TTTGCCCTGAAGAGCCCGCCAAGTAAAAACAGTGAC...AACATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATTCCTCTTTTTGCTGCTaGATACATTGCTGTCACATT | + |
|
Preference number: 4 (lower is better) Translates to: ILTFSPSTHSSLLWYPLNSSFCC*IHCCHI Trigger: AATGTGACAGCAATGTATCCAGCAGCAAAAAGAGGA...ATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CCA 90 bp | AATAATAACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCAAAACCCCGTATAACTaGAATCTGTCCGAGGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NNNNYSCKLVSPYILTFSKTPYN*NLSEAS Trigger: ACTCGCCTCGGACAGATTCCAGTTATACGGGGTTTT...GCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTTATTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| 3UTR CAA 72 bp | ATCACAAAATTGCAGTCTGCCTGCTGGCCTCTTCAATaGAAAGTTGGATTTATAAATCCTGTCCAGTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: ITKLQSACWPLQ*KVGFINPVQLT Trigger: AGTCAACTGGACAGGATTTATAAATCCAACTTTCAATTGAAGAGGCCAGCAGGCAGACTGCAATTTTGTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR GCA 90 bp | AATAATAACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCTGCTGCTGGATACATTaGTGTCACATTTGTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NNNNYSCKLVSPYILTFSCCWIH*CHICPQ Trigger: TTGGGGACAAATGTGACAGCAATGTATCCAGCAGCA...GCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTTATTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | AATAATAACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCTCCAGTTCCTCCAGCTaGAAACTGGTAAAGGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NNNNYSCKLVSPYILTFSSSSSS*KLVKVV Trigger: AACTACCTTTACCAGTTTGCAGCTGGAGGAACTGGA...GCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTTATTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR GCA 90 bp | TTTACTAATGAGTTCTCAGTTTTAATCACAAAATTGCAGTCTGCCTGCTGGCCTAAATGGCTTTTAGCTTaGTGTATTTGGCCGTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: FTNEFSVLITKLQSACWPKWLLA*CIWPYR Trigger: ACGATACGGCCAAATACAGCAAGCTAAAAGCCATTT...AGGCCAGCAGGCAGACTGCAATTTTGTGATTAAAACTGAGAACTCATTAGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR CCA 90 bp | GATCTGAGCCATTGGAAGTCATCTTCGCTTCAATTAATTGACTTTGCCTTTATGTCCTCTTTTTGCTGCTaGATACATTGCTGTCACATT | + |
|
Preference number: 4 (lower is better) Translates to: DLSHWKSSSLQLIDFAFMSSFCC*IHCCHI Trigger: AATGTGACAGCAATGTATCCAGCAGCAAAAAGAGGA...CATAAAGGCAAAGTCAATTAATTGAAGCGAAGATGACTTCCAATGGCTCAGATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR CCA 90 bp | TTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATTTAGCTTGCTGTATTTaGCCGTATCGTTCTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSPSTHSSLLWYPLNTRNLACCI*PYRSLF Trigger: AAAAAGAGAACGATACGGCCAAATACAGCAAGCTAA...ATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS-3UTR CCA 90 bp | TCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATGTTTACGTGGCAGCGAAATaGCTTTTAGCTTGCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: STHSSLLWYPLNTRNKNVYVAAK*LLACCI Trigger: AATACAGCAAGCTAAAAGCCATTTCGCTGCCACGTA...AACATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| 3UTR CAA 72 bp | ATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATaGTGGTATCCTTTAAATACGAGAAATAAGAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILTFSPSTHSSL*WYPLNTRNKNV Trigger: AACATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| 3UTR CAA 72 bp | ACGTTTACTAATGAGTTCTCAGTTTTAATCACAAAATaGCAGTCTGCCTGCTGGCCTCTTCAATTGAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TFTNEFSVLITK*QSACWPLQLKV Trigger: AACTTTCAATTGAAGAGGCCAGCAGGCAGACTGCAATTTTGTGATTAAAACTGAGAACTCATTAGTAAACGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR CCA 90 bp | TCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATGTTTCCTCTTTTTGCTGCTaGATACATTGCTGTCACATT | + |
|
Preference number: 4 (lower is better) Translates to: STHSSLLWYPLNTRNKNVSSFCC*IHCCHI Trigger: AATGTGACAGCAATGTATCCAGCAGCAAAAAGAGGA...AACATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CCA 90 bp | AATAATAACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCTTAGCTTGCTGTATTTaGCCGTATCGTTCTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NNNNYSCKLVSPYILTFSLACCI*PYRSLF Trigger: AAAAAGAGAACGATACGGCCAAATACAGCAAGCTAA...GCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTTATTATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CCA 90 bp | TCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATGTTTTAGCTTGCTGTATTTaGCCGTATCGTTCTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: STHSSLLWYPLNTRNKNVLACCI*PYRSLF Trigger: AAAAAGAGAACGATACGGCCAAATACAGCAAGCTAA...AACATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS GCA 90 bp | CGTGATGCTCCGCTCGCGGCAGCGGCCCGAAGGCCTGCACGCATTTaGCAGCCGTCGCTTTGCCGTAAAAGGACTCATTGTCCAGCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RDAPLAAAARRPARI*QPSLCRKRTHCPAS Trigger: AGACGCTGGACAATGAGTCCTTTTACGGCAAAGCGACGGCTGGCAAATGCGTGCAGGCCTTCGGGCCGCTGCCGCGAGCGGAGCATCACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | CTCCGGCTTTGTTTCAAATGCGTGTCCGTTGGTAGCTCCAGTGAGAAGAGAGTCAGTCACTGTTTTTACTaGGCGGGCTCTTCAGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LRLCFKCVSVGSSSEKRVSHCFY*AGSSGQ Trigger: TTGCCCTGAAGAGCCCGCCAAGTAAAAACAGTGACT...GACTCTCTTCTCACTGGAGCTACCAACGGACACGCATTTGAAACAAAGCCGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
||
| CDS GCA 90 bp | CATCCCTTTCACGGGAGACATCCTGAGATTGTTGCAGTTATCCATTaGTCTATTCAGCTCGGTGTGAAGGGGCTGTCCTTCCACTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HPFHGRHPEIVAVIH*SIQLGVKGLSFHFG Trigger: ACCAAAGTGGAAGGACAGCCCCTTCACACCGAGCTGAATAGAGCAATGGATAACTGCAACAATCTCAGGATGTCTCCCGTGAAAGGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS TCA 90 bp | CATCCAGTTCGCTCTTCTCTGGCATCCCTTTCACGGGAGACATCCTaGGATTGTTGCAGTTATCCATTGCTCTATTCAGCTCGGTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HPVRSSLASLSRETS*DCCSYPLLYSARCE Trigger: TTCACACCGAGCTGAATAGAGCAATGGATAACTGCAACAATCTCAGGATGTCTCCCGTGAAAGGGATGCCAGAGAAGAGCGAACTGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS-3UTR CAA 90 bp | CGTATAACTGGAATCTGTCCGAGGCGAGTGAGAGTAAGGTGTCATGCAGGAGGAGGAGACATCCTGAGATaGTTGCAGTTATCCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RITGICPRRVRVRCHAGGGDILR*LQLSIA Trigger: AGCAATGGATAACTGCAACAATCTCAGGATGTCTCC...TCCTCCTGCATGACACCTTACTCTCACTCGCCTCGGACAGATTCCAGTTATACG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
||
| CDS-3UTR CAA 90 bp | CCGTATATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTGGCGGTGTGCTCCTaGGCCTTCATTCTCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: PYILTFSPSTHSSLLWYPLAVCS*AFILRT Trigger: TGTTCTGAGAATGAAGGCCAAGGAGCACACCGCCAA...AGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGATATACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
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| CDS CCA 90 bp | ATTGCTGTCACATTTGTCCCCAAGTTCATCCAGTTCGCTCTTCTCTaGCATCCCTTTCACGGGAGACATCCTGAGATTGTTGCAGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: IAVTFVPKFIQFALL*HPFHGRHPEIVAVI Trigger: GATAACTGCAACAATCTCAGGATGTCTCCCGTGAAAGGGATGCCAGAGAAGAGCGAACTGGATGAACTTGGGGACAAATGTGACAGCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS-3UTR CAA 90 bp | AGCATGCATGACGTAACCACAGAACCACCGCTAGCATTTCCTGCCCACAAATTGACATTGCTGTCACATTaGTCCCCAAGTTCATCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SMHDVTTEPPLAFPAHKLTLLSH*SPSSSS Trigger: ACTGGATGAACTTGGGGACAAATGTGACAGCAATGT...CAATTTGTGGGCAGGAAATGCTAGCGGTGGTTCTGTGGTTACGTCATGCATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
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| CDS-3UTR CAA 90 bp | TACTGGAAGACCTCCTTTCAAACTCCGGCTTTGTTTCAAATGCGTGTCCGTTGGTTGCTGCTGGATACATaGCTGTCACATTTGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: YWKTSFQTPALFQMRVRWLLLDT*LSHLSP Trigger: TGGGGACAAATGTGACAGCAATGTATCCAGCAGCAA...CCAACGGACACGCATTTGAAACAAAGCCGGAGTTTGAAAGGAGGTCTTCCAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
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| CDS-3UTR CAA 90 bp | CCGTATATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTCGGTGTCTCCTCTTTTaGCTGCTGGATACATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PYILTFSPSTHSSLLWYPRCLLF*LLDTLL Trigger: CAGCAATGTATCCAGCAGCAAAAAGAGGAGACACCG...AGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGATATACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS-3UTR CAA 90 bp | AACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCACAATGGCCCATGAAATATaGGCGGTGTGCTCCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NYSCKLVSPYILTFSPSTMAHEI*AVCSLA Trigger: GGCCAAGGAGCACACCGCCAATATTTCATGGGCCAT...TGTGGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
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| CDS-3UTR CAA 90 bp | AACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCATGGCCCATGAAATATaGGCGGTGTGCTCCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NNYSCKLVSPYILTFSPSMAHEI*AVCSLA Trigger: GGCCAAGGAGCACACCGCCAATATTTCATGGGCCAT...GGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
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| CDS GCA 90 bp | GGTAAGACTGATATGTCGTACGTGGCAGCGAAATGGCTTTTAGCTTaGTGTATTTGGCCGTATCGTTCTCTTTTTCTCCACTTGGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GKTDMSYVAAKWLLA*CIWPYRSLFLHLAL Trigger: AAGGGCCAAGTGGAGAAAAAGAGAACGATACGGCCAAATACAGCAAGCTAAAAGCCATTTCGCTGCCACGTACGACATATCAGTCTTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS CCA 90 bp | CTGTCCGTCCTTGGTAAGACTGATATGTCGTACGTGGCAGCGAAATaGCTTTTAGCTTGCTGTATTTGGCCGTATCGTTCTCTTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSVLGKTDMSYVAAK*LLACCIWPYRSLFL Trigger: GAGAAAAAGAGAACGATACGGCCAAATACAGCAAGCTAAAAGCCATTTCGCTGCCACGTACGACATATCAGTCTTACCAAGGACGGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS-3UTR CAA 90 bp | AATAATAACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCAAGGCCTGCACGCATTaGCCAGCCGTCGCTTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NNNNYSCKLVSPYILTFSKACTH*PAVALP Trigger: CGGCAAAGCGACGGCTGGCAAATGCGTGCAGGCCTT...GCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTTATTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS-3UTR CAA 90 bp | ACTGGAAGACCTCCTTTCAAACTCCGGCTTTGTTTCAAATGCGTGTCCGTTGGTTGTTGCAGTTATCCATaGCTCTATTCAGCTCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TGRPPFKLRLCFKCVSVGCCSYP*LYSARC Trigger: ACACCGAGCTGAATAGAGCAATGGATAACTGCAACA...ACCAACGGACACGCATTTGAAACAAAGCCGGAGTTTGAAAGGAGGTCTTCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
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| CDS-3UTR CAA 90 bp | CCTCCTTTCAAACTCCGGCTTTGTTTCAAATGCGTGTCCGTTGGTAGCTCCAGTGACATCCTGAGATTGTaGCAGTTATCCATTGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: PPFKLRLCFKCVSVGSSSDILRL*QLSIAL Trigger: TAGAGCAATGGATAACTGCAACAATCTCAGGATGTC...ACTGGAGCTACCAACGGACACGCATTTGAAACAAAGCCGGAGTTTGAAAGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
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| CDS-3UTR CAA 90 bp | CCGTATATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTGCTGCTGGATACATaGCTGTCACATTTGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PYILTFSPSTHSSLLWYPLLLDT*LSHLSP Trigger: TGGGGACAAATGTGACAGCAATGTATCCAGCAGCAA...AGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGATATACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS-3UTR CAA 90 bp | TTGCAGTCTGCCTGCTGGCCTCTTCAATTGAAAGTTGGATTTATAAATCCTGTCTTGGCGGTGTGCTCCTaGGCCTTCATTCTCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: LQSACWPLQLKVGFINPVLAVCS*AFILRT Trigger: TGTTCTGAGAATGAAGGCCAAGGAGCACACCGCCAA...GACAGGATTTATAAATCCAACTTTCAATTGAAGAGGCCAGCAGGCAGACTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
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| CDS-3UTR CAA 90 bp | ATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATATGGCCCATGAAATATaGGCGGTGTGCTCCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ILTFSPSTHSSLLWYPLNMAHEI*AVCSLA Trigger: GGCCAAGGAGCACACCGCCAATATTTCATGGGCCAT...ATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
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| CDS-3UTR CAA 90 bp | ACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAGTCACTGTTTTTACTaGGCGGGCTCTTCAGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TFSPSTHSSLLWYPLNTRSHCFY*AGSSGQ Trigger: TTGCCCTGAAGAGCCCGCCAAGTAAAAACAGTGACT...TCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | CCGTATATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTGTTGCAGTTATCCATaGCTCTATTCAGCTCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PYILTFSPSTHSSLLWYPCCSYP*LYSARC Trigger: ACACCGAGCTGAATAGAGCAATGGATAACTGCAACA...AGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGATATACGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | CCGTATATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTGGAGACATCCTGAGATaGTTGCAGTTATCCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PYILTFSPSTHSSLLWYPGDILR*LQLSIA Trigger: AGCAATGGATAACTGCAACAATCTCAGGATGTCTCC...AGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGATATACGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | GCTAACGTTCACCGGAACCACATGAAGATCCTAACAGAGTACAAAGAGTCGATGACATTGCTGTCACATTaGTCCCCAAGTTCATCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ANVHRNHMKILTEYKESMTLLSH*SPSSSS Trigger: ACTGGATGAACTTGGGGACAAATGTGACAGCAATGT...CATCGACTCTTTGTACTCTGTTAGGATCTTCATGTGGTTCCGGTGAACGTTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR CAA 90 bp | TTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATATGGCCCATGAAATATaGGCGGTGTGCTCCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSPSTHSSLLWYPLNTRNMAHEI*AVCSLA Trigger: GGCCAAGGAGCACACCGCCAATATTTCATGGGCCAT...ATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | TTGCAGTCTGCCTGCTGGCCTCTTCAATTGAAAGTTGGATTTATAAATCCTGTCTTGCTGCTGGATACATaGCTGTCACATTTGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LQSACWPLQLKVGFINPVLLLDT*LSHLSP Trigger: TGGGGACAAATGTGACAGCAATGTATCCAGCAGCAA...GACAGGATTTATAAATCCAACTTTCAATTGAAGAGGCCAGCAGGCAGACTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR CAA 90 bp | ATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATCGGTGTCTCCTCTTTTaGCTGCTGGATACATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ILTFSPSTHSSLLWYPLNRCLLF*LLDTLL Trigger: CAGCAATGTATCCAGCAGCAAAAAGAGGAGACACCG...ATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | TTCTCAGAACAGCGATACTGGAAGACCTCCTTTCAAACTCCGGCTTTGTTTCAAGAAATGGCTTTTAGCTaGCTGTATTTGGCCGTATCG | + |
|
Preference number: 5 (lower is better) Translates to: FSEQRYWKTSFQTPALFQEMAFS*LYLAVS Trigger: CGATACGGCCAAATACAGCAAGCTAAAAGCCATTTC...TTGAAACAAAGCCGGAGTTTGAAAGGAGGTCTTCCAGTATCGCTGTTCTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATTTGGCGGTGTGCTCCTaGGCCTTCATTCTCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: FSPSTHSSLLWYPLNTRNLAVCS*AFILRT Trigger: TGTTCTGAGAATGAAGGCCAAGGAGCACACCGCCAA...ATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAGTCACTGTTTTTACTaGGCGGGCTCTTCAGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FSPSTHSSLLWYPLNTRNSHCFY*AGSSGQ Trigger: TTGCCCTGAAGAGCCCGCCAAGTAAAAACAGTGACT...ATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | AACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCACAGGAGACATCCTGAGATaGTTGCAGTTATCCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NYSCKLVSPYILTFSPSTGDILR*LQLSIA Trigger: AGCAATGGATAACTGCAACAATCTCAGGATGTCTCC...TGTGGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | AACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCACATTGCTGTCACATTaGTCCCCAAGTTCATCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NNYSCKLVSPYILTFSPSTLLSH*SPSSSS Trigger: ACTGGATGAACTTGGGGACAAATGTGACAGCAATGT...GGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAACATTGCTGTCACATTaGTCCCCAAGTTCATCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TFSPSTHSSLLWYPLNTRTLLSH*SPSSSS Trigger: ACTGGATGAACTTGGGGACAAATGTGACAGCAATGT...TCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAGAAATGGCTTTTAGCTaGCTGTATTTGGCCGTATCG | + |
|
Preference number: 5 (lower is better) Translates to: TFSPSTHSSLLWYPLNTREMAFS*LYLAVS Trigger: CGATACGGCCAAATACAGCAAGCTAAAAGCCATTTC...TCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | AACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCACAGAAATGGCTTTTAGCTaGCTGTATTTGGCCGTATCG | + |
|
Preference number: 5 (lower is better) Translates to: NYSCKLVSPYILTFSPSTEMAFS*LYLAVS Trigger: CGATACGGCCAAATACAGCAAGCTAAAAGCCATTTC...TGTGGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | AACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCACATTTCAAACTCCGGCTTaGTTTCAAATGCGTGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: NYSCKLVSPYILTFSPSTFQTPA*FQMRVR Trigger: ACGGACACGCATTTGAAACAAAGCCGGAGTTTGAAA...TGTGGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | AACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCTTTCAAACTCCGGCTTaGTTTCAAATGCGTGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: NNYSCKLVSPYILTFSPSFQTPA*FQMRVR Trigger: ACGGACACGCATTTGAAACAAAGCCGGAGTTTGAAA...GGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | ATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATTGTTGCAGTTATCCATaGCTCTATTCAGCTCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ILTFSPSTHSSLLWYPLNCCSYP*LYSARC Trigger: ACACCGAGCTGAATAGAGCAATGGATAACTGCAACA...ATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAGACATCCTGAGATTGTaGCAGTTATCCATTGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: TFSPSTHSSLLWYPLNTRDILRL*QLSIAL Trigger: TAGAGCAATGGATAACTGCAACAATCTCAGGATGTC...TCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | AACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCCTTCCGACATCCTGAGATTGTaGCAGTTATCCATTGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: NNYSCKLVSPYILTFSPSDILRL*QLSIAL Trigger: TAGAGCAATGGATAACTGCAACAATCTCAGGATGTC...GGAAGGGCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | ATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACATTGCTGTCACATTaGTCCCCAAGTTCATCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ILTFSPSTHSSLLWYPLNTLLSH*SPSSSS Trigger: ACTGGATGAACTTGGGGACAAATGTGACAGCAATGT...ATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATTTGCTGCTGGATACATaGCTGTCACATTTGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FSPSTHSSLLWYPLNTRNLLLDT*LSHLSP Trigger: TGGGGACAAATGTGACAGCAATGTATCCAGCAGCAA...ATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | TCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATGTTTTGGCGGTGTGCTCCTaGGCCTTCATTCTCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: STHSSLLWYPLNTRNKNVLAVCS*AFILRT Trigger: TGTTCTGAGAATGAAGGCCAAGGAGCACACCGCCAA...AACATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | TCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATGTTAGTCACTGTTTTTACTaGGCGGGCTCTTCAGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: STHSSLLWYPLNTRNKNVSHCFY*AGSSGQ Trigger: TTGCCCTGAAGAGCCCGCCAAGTAAAAACAGTGACT...AACATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATTGTTGCAGTTATCCATaGCTCTATTCAGCTCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FSPSTHSSLLWYPLNTRNCCSYP*LYSARC Trigger: ACACCGAGCTGAATAGAGCAATGGATAACTGCAACA...ATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | TTTACTAATGAGTTCTCAGTTTTAATCACAAAATTGCAGTCTGCCTGCTGGCCTTGTTGCAGTTATCCATaGCTCTATTCAGCTCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FTNEFSVLITKLQSACWPCCSYP*LYSARC Trigger: ACACCGAGCTGAATAGAGCAATGGATAACTGCAACA...AGGCCAGCAGGCAGACTGCAATTTTGTGATTAAAACTGAGAACTCATTAGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR CAA 90 bp | ATCTTGACCTTTAGCCCTTCCACACACAGCAGCTTATTGTGGTATCCTTTAAATGACATCCTGAGATTGTaGCAGTTATCCATTGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: ILTFSPSTHSSLLWYPLNDILRL*QLSIAL Trigger: TAGAGCAATGGATAACTGCAACAATCTCAGGATGTC...ATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGAAGGGCTAAAGGTCAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | TTTACTAATGAGTTCTCAGTTTTAATCACAAAATTGCAGTCTGCCTGCTGGCCTGGAGACATCCTGAGATaGTTGCAGTTATCCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FTNEFSVLITKLQSACWPGDILR*LQLSIA Trigger: AGCAATGGATAACTGCAACAATCTCAGGATGTCTCC...AGGCCAGCAGGCAGACTGCAATTTTGTGATTAAAACTGAGAACTCATTAGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR CAA 90 bp | AATAATAACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCCGGTGTCTCCTCTTTTaGCTGCTGGATACATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NNNNYSCKLVSPYILTFSRCLLF*LLDTLL Trigger: CAGCAATGTATCCAGCAGCAAAAAGAGGAGACACCG...GCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTTATTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | TCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATGTTCGGTGTCTCCTCTTTTaGCTGCTGGATACATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: STHSSLLWYPLNTRNKNVRCLLF*LLDTLL Trigger: CAGCAATGTATCCAGCAGCAAAAAGAGGAGACACCG...AACATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS-3UTR CAA 90 bp | GATCTGAGCCATTGGAAGTCATCTTCGCTTCAATTAATTGACTTTGCCTTTATGTTTCAAACTCCGGCTTaGTTTCAAATGCGTGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: DLSHWKSSSLQLIDFAFMFQTPA*FQMRVR Trigger: ACGGACACGCATTTGAAACAAAGCCGGAGTTTGAAA...CATAAAGGCAAAGTCAATTAATTGAAGCGAAGATGACTTCCAATGGCTCAGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 |
||
| CDS-3UTR CAA 90 bp | AATAATAACAACTATTCATGTAAGCTGGTCTCACCGTATATCTTGACCTTTAGCTTGCTGCTGGATACATaGCTGTCACATTTGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: NNNNYSCKLVSPYILTFSLLLDT*LSHLSP Trigger: TGGGGACAAATGTGACAGCAATGTATCCAGCAGCAA...GCTAAAGGTCAAGATATACGGTGAGACCAGCTTACATGAATAGTTGTTATTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | TCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATGTTGGAGACATCCTGAGATaGTTGCAGTTATCCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: STHSSLLWYPLNTRNKNVGDILR*LQLSIA Trigger: AGCAATGGATAACTGCAACAATCTCAGGATGTCTCC...AACATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | TCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATGTTGAAATGGCTTTTAGCTaGCTGTATTTGGCCGTATCG | + |
|
Preference number: 5 (lower is better) Translates to: STHSSLLWYPLNTRNKNVEMAFS*LYLAVS Trigger: CGATACGGCCAAATACAGCAAGCTAAAAGCCATTTC...AACATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS-3UTR CAA 90 bp | TCCACACACAGCAGCTTATTGTGGTATCCTTTAAATACGAGAAATAAGAATGTTTTTCAAACTCCGGCTTaGTTTCAAATGCGTGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: STHSSLLWYPLNTRNKNVFQTPA*FQMRVR Trigger: ACGGACACGCATTTGAAACAAAGCCGGAGTTTGAAA...AACATTCTTATTTCTCGTATTTAAAGGATACCACAATAAGCTGCTGTGTGTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000218282.2 ENSMUST00000219194.2 |
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| CDS GCA 72 bp | CCGCTCGCGGCAGCGGCCCGAAGGCCTGCACGCATTTaGCAGCCGTCGCTTTGCCGTAAAAGGACTCATTGT | + |
|
Preference number: 6 (lower is better) Translates to: PLAAAARRPARI*QPSLCRKRTHC Trigger: ACAATGAGTCCTTTTACGGCAAAGCGACGGCTGGCAAATGCGTGCAGGCCTTCGGGCCGCTGCCGCGAGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS TCA 72 bp | TCAGCTCGGTGTGAAGGGGCTGTCCTTCCACTTTGGTaGTTCCATAGTTCACGCTGCTGTCCTGACAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SARCEGAVLPLW*FHSSRCCPDRA Trigger: CGCCCTGTCAGGACAGCAGCGTGAACTATGGAATCACCAAAGTGGAAGGACAGCCCCTTCACACCGAGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS GCA 72 bp | CACGGGAGACATCCTGAGATTGTTGCAGTTATCCATTaGTCTATTCAGCTCGGTGTGAAGGGGCTGTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HGRHPEIVAVIH*SIQLGVKGLSF Trigger: GAAGGACAGCCCCTTCACACCGAGCTGAATAGAGCAATGGATAACTGCAACAATCTCAGGATGTCTCCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS CAA 72 bp | CGCCTCCTGTGCCCATGTAAAAGTCACTGTTTTTACTaGGCGGGCTCTTCAGGGCAAACTTCTCGCTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RLLCPCKSHCFY*AGSSGQTSRSE Trigger: TTCTGAGCGAGAAGTTTGCCCTGAAGAGCCCGCCAAGTAAAAACAGTGACTTTTACATGGGCACAGGAGGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS CAA 72 bp | CCTTGGGCAACTCCTGGGCTTCTTTTTCTGATTTCCTaGCAGAGATGTTCATTAGCCCAGGTGGAGAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PWATPGLLFLIS*QRCSLAQVERG Trigger: ACCCCTCTCCACCTGGGCTAATGAACATCTCTGCAAGGAAATCAGAAAAAGAAGCCCAGGAGTTGCCCAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217946.2 |
||
| CDS CCA 72 bp | GCCTCCTGTGCCCATGTAAAAGTCACTGTTTTTACTTaGCGGGCTCTTCAGGGCAAACTTCTCGCTCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: ASCAHVKVTVFT*RALQGKLLAQK Trigger: TTTCTGAGCGAGAAGTTTGCCCTGAAGAGCCCGCCAAGTAAAAACAGTGACTTTTACATGGGCACAGGAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS CAA 90 bp | GTTCGGTGTCTCCTCTTTTTGCTGCTGGATACATTGCTGTCACATTaGTCCCCAAGTTCATCCAGTTCGCTCTTCTCTGGCATCCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VRCLLFLLLDTLLSH*SPSSSSSLFSGIPF Trigger: GAAAGGGATGCCAGAGAAGAGCGAACTGGATGAACTTGGGGACAAATGTGACAGCAATGTATCCAGCAGCAAAAAGAGGAGACACCGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS CAA 90 bp | CTACCTTCTCCTTGGGCAACTCCTGGGCTTCTTTTTCTGATTTCCTaGCAGAGATGTTCATTAGCCCAGGTGGAGAGGGGTGTGACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LPSPWATPGLLFLIS*QRCSLAQVERGVTK Trigger: TTTTGTCACACCCCTCTCCACCTGGGCTAATGAACATCTCTGCAAGGAAATCAGAAAAAGAAGCCCAGGAGTTGCCCAAGGAGAAGGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217946.2 |
||
| CDS TCA 72 bp | CGCTCTTCTCTGGCATCCCTTTCACGGGAGACATCCTaGGATTGTTGCAGTTATCCATTGCTCTATTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RSSLASLSRETS*DCCSYPLLYSA Trigger: AGCTGAATAGAGCAATGGATAACTGCAACAATCTCAGGATGTCTCCCGTGAAAGGGATGCCAGAGAAGAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS TCA 72 bp | TGTGAAGGCACTGGCCTGGGAGTAAAGAATGGACTGTaGTGTCAAACATGGCCCATGAAATATTGGCGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CEGTGLGVKNGL*CQTWPMKYWRC Trigger: ACACCGCCAATATTTCATGGGCCATGTTTGACATCACAGTCCATTCTTTACTCCCAGGCCAGTGCCTTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217946.2 |
||
| CDS GCA 72 bp | GTGATGTCAAACATGGCCCATGAAATATTGGCGGTGTaGTCCTTGGCCTTCATTCTCAGAACAGCGATACTG | + |
|
Preference number: 6 (lower is better) Translates to: VMSNMAHEILAV*SLAFILRTAIL Trigger: CAGTATCGCTGTTCTGAGAATGAAGGCCAAGGAGCACACCGCCAATATTTCATGGGCCATGTTTGACATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217946.2 |
||
| CDS CCA 72 bp | ACATTTGTCCCCAAGTTCATCCAGTTCGCTCTTCTCTaGCATCCCTTTCACGGGAGACATCCTGAGATTGTT | + |
|
Preference number: 6 (lower is better) Translates to: TFVPKFIQFALL*HPFHGRHPEIV Trigger: AACAATCTCAGGATGTCTCCCGTGAAAGGGATGCCAGAGAAGAGCGAACTGGATGAACTTGGGGACAAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS CAA 72 bp | TTTTCAGTGACTGACTCTGTGGGTAGCTGTCCGTCCTaGGTAAGACTGATATGTCGTACGTGGCAGCGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: FSVTDSVGSCPS*VRLICRTWQRN Trigger: ATTTCGCTGCCACGTACGACATATCAGTCTTACCAAGGACGGACAGCTACCCACAGAGTCAGTCACTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218681.2 |
||
| CDS CAA 90 bp | TCCTCCAGCTGCAAACTGGTAAAGGTAGTTCGGTGTCTCCTCTTTTaGCTGCTGGATACATTGCTGTCACATTTGTCCCCAAGTTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSCKLVKVVRCLLF*LLDTLLSHLSPSSS Trigger: GGATGAACTTGGGGACAAATGTGACAGCAATGTATCCAGCAGCAAAAAGAGGAGACACCGAACTACCTTTACCAGTTTGCAGCTGGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
||
| CDS CAA 90 bp | ACTGTGATGTCAAACATGGCCCATGAAATATTGGCGGTGTGCTCCTaGGCCTTCATTCTCAGAACAGCGATACTGGAAGACCTCCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TVMSNMAHEILAVCS*AFILRTAILEDLLS Trigger: TGAAAGGAGGTCTTCCAGTATCGCTGTTCTGAGAATGAAGGCCAAGGAGCACACCGCCAATATTTCATGGGCCATGTTTGACATCACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217946.2 |
||
| CDS CAA 90 bp | CTGGTAAAGGTAGTTCGGTGTCTCCTCTTTTTGCTGCTGGATACATaGCTGTCACATTTGTCCCCAAGTTCATCCAGTTCGCTCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LVKVVRCLLFLLLDT*LSHLSPSSSSSLFS Trigger: AGAGAAGAGCGAACTGGATGAACTTGGGGACAAATGTGACAGCAATGTATCCAGCAGCAAAAAGAGGAGACACCGAACTACCTTTACCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS CCA 72 bp | TACGTGGCAGCGAAATGGCTTTTAGCTTGCTGTATTTaGCCGTATCGTTCTCTTTTTCTCCACTTGGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: YVAAKWLLACCI*PYRSLFLHLAL Trigger: AAGGGCCAAGTGGAGAAAAAGAGAACGATACGGCCAAATACAGCAAGCTAAAAGCCATTTCGCTGCCACGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS CAA 72 bp | GTAGTTCGGTGTCTCCTCTTTTTGCTGCTGGATACATaGCTGTCACATTTGTCCCCAAGTTCATCCAGTTCG | + |
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Preference number: 6 (lower is better) Translates to: VVRCLLFLLLDT*LSHLSPSSSSS Trigger: CGAACTGGATGAACTTGGGGACAAATGTGACAGCAATGTATCCAGCAGCAAAAAGAGGAGACACCGAACTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS CAA 72 bp | ACAAATTGTTCTGGATCTGTGGGTAGCTGTCCGTCCTaGGTAAGACTGATATGTCGTACGTGGCAGCGAAAT | + |
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Preference number: 6 (lower is better) Translates to: TNCSGSVGSCPS*VRLICRTWQRN Trigger: ATTTCGCTGCCACGTACGACATATCAGTCTTACCAAGGACGGACAGCTACCCACAGATCCAGAACAATTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000219194.2 |
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| CDS GCA 72 bp | GATATGTCGTACGTGGCAGCGAAATGGCTTTTAGCTTaGTGTATTTGGCCGTATCGTTCTCTTTTTCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: DMSYVAAKWLLA*CIWPYRSLFLH Trigger: GTGGAGAAAAAGAGAACGATACGGCCAAATACAGCAAGCTAAAAGCCATTTCGCTGCCACGTACGACATATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS CCA 72 bp | CTTGGTAAGACTGATATGTCGTACGTGGCAGCGAAATaGCTTTTAGCTTGCTGTATTTGGCCGTATCGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LGKTDMSYVAAK*LLACCIWPYRS Trigger: AGAACGATACGGCCAAATACAGCAAGCTAAAAGCCATTTCGCTGCCACGTACGACATATCAGTCTTACCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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| CDS CAA 72 bp | TGCAAACTGGTAAAGGTAGTTCGGTGTCTCCTCTTTTaGCTGCTGGATACATTGCTGTCACATTTGTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: CKLVKVVRCLLF*LLDTLLSHLSP Trigger: TGGGGACAAATGTGACAGCAATGTATCCAGCAGCAAAAAGAGGAGACACCGAACTACCTTTACCAGTTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000040859.6 ENSMUST00000167156.9 ENSMUST00000217946.2 ENSMUST00000218282.2 ENSMUST00000218681.2 ENSMUST00000219194.2 |
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