Pregenerated sensors for ALPPL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026246Ensembl transcript IDs: ENSMUST00000027455.13, ENSMUST00000188310.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAGGCACCTCTGAGCTTAGGAAGTaGGTTTCCAGCTGGAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: QEDKHSSFLWQPDTGGGTSELRK*VSSWSP Trigger: TGGGCTCCAGCTGGAAACCCACTTCCTAAGCTCAGA...GGTGCCTCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| 3UTR-3UTR TCA 90 bp | AACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAGGCACCTACAGTCCCAATACTAAGGTATAGCTaGCAAACCAAGTTAGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: NTLHFYGSQTQEEAPTVPILRYS*QTKLVL Trigger: CAGAACTAACTTGGTTTGTCAGCTATACCTTAGTAT...TGGGACTGTAGGTGCCTCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGCCCAGAAAACAGTACTaGCAGAAAGGCACTGAACAA | + |
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Preference number: 2 (lower is better) Translates to: EGSKKINTLHFYGSQTQEPRKQY*QKGTEQ Trigger: TTGTTCAGTGCCTTTCTGCCAGTACTGTTTTCTGGG...CTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAGAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACATCTGAGCTTAGGAAGTaGGTTTCCAGCTGGAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: KRRVQEDKHSSFLWQPDTSELRK*VSSWSP Trigger: TGGGCTCCAGCTGGAAACCCACTTCCTAAGCTCAGA...TGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAGGCACCCTGAGGTTAAGATGGTaGACTGAAATCTTGACTAGG | + |
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Preference number: 2 (lower is better) Translates to: QEDKHSSFLWQPDTGGGTLRLRW*TEILTR Trigger: CCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAG...GGTGCCTCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGACTGAGGTTAAGATGGTaGACTGAAATCTTGACTAGG | + |
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Preference number: 2 (lower is better) Translates to: RVQEDKHSSFLWQPDTGGLRLRW*TEILTR Trigger: CCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAG...TCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAGGCACCATACTAAGGTATAGCTaGCAAACCAAGTTAGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: QEDKHSSFLWQPDTGGGTILRYS*QTKLVL Trigger: CAGAACTAACTTGGTTTGTCAGCTATACCTTAGTAT...GGTGCCTCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGAAGCTGAGGTTAAGATaGTGGACTGAAATCTTGACT | + |
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Preference number: 2 (lower is better) Translates to: EGSKKINTLHFYGSQTQEKLRLR*WTEILT Trigger: AGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTT...CTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| 3UTR CCA 72 bp | CCTACAGTCCCAGATTCGGGGAAGCTGAGGTTAAGATaGTGGACTGAAATCTTGACTAGGCCAGACCCTGTC | + |
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Preference number: 3 (lower is better) Translates to: PTVPDSGKLRLR*WTEILTRPDPV Trigger: GACAGGGTCTGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATCTGGGACTGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| 3UTR CCA 72 bp | GAAGTGGGTTTCCAGCTGGAGCCCAGAAAACAGTACTaGCAGAAAGGCACTGAACAAGCCAACAAGTGGAGT | + |
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Preference number: 3 (lower is better) Translates to: EVGFQLEPRKQY*QKGTEQANKWS Trigger: ACTCCACTTGTTGGCTTGTTCAGTGCCTTTCTGCCAGTACTGTTTTCTGGGCTCCAGCTGGAAACCCACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| 3UTR CCA 72 bp | ACAGTCCCAGATTCGGGGAAGCTGAGGTTAAGATGGTaGACTGAAATCTTGACTAGGCCAGACCCTGTCTCA | + |
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Preference number: 3 (lower is better) Translates to: TVPDSGKLRLRW*TEILTRPDPVS Trigger: TGAGACAGGGTCTGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATCTGGGACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| 3UTR CCA 72 bp | AGAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATaGCAGCCAGACACAGGAGGAGGCACCTACAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: RRVQEDKHSSFL*QPDTGGGTYSP Trigger: GGGACTGTAGGTGCCTCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR GCA 90 bp | GGTTTCCAGCTGGAGCCCAGAAAACAGTACTGGCAGAAAGGCACTGAACAAGCCACTCCGTGCACCAGGTaGGCCTGTGGGCCACGCGCG | + |
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Preference number: 4 (lower is better) Translates to: GFQLEPRKQYWQKGTEQATPCTR*ACGPRA Trigger: CGCGCGTGGCCCACAGGCGCACCTGGTGCACGGAGT...GGCTTGTTCAGTGCCTTTCTGCCAGTACTGTTTTCTGGGCTCCAGCTGGAAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR GCA 90 bp | GATTCGGGGAAGCTGAGGTTAAGATGGTGGACTGAAATCTTGACTAGGCCAGACACTCCGTGCACCAGGTaGGCCTGTGGGCCACGCGCG | + |
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Preference number: 4 (lower is better) Translates to: DSGKLRLRWWTEILTRPDTPCTR*ACGPRA Trigger: CGCGCGTGGCCCACAGGCGCACCTGGTGCACGGAGT...GTCTGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR TCA 90 bp | GGTTTCCAGCTGGAGCCCAGAAAACAGTACTGGCAGAAAGGCACTGAACAAGCCGCCAGGGAAGGGTCCTaGGCAGGGTCTCGGTGGATT | + |
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Preference number: 4 (lower is better) Translates to: GFQLEPRKQYWQKGTEQAAREGS*AGSRWI Trigger: AATCCACCGAGACCCTGCTCAGGACCCTTCCCTGGC...GGCTTGTTCAGTGCCTTTCTGCCAGTACTGTTTTCTGGGCTCCAGCTGGAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR TCA 90 bp | CCAGATTCGGGGAAGCTGAGGTTAAGATGGTGGACTGAAATCTTGACTAGGCCAGGCACACCTGTAGGCTaGGGCCCAGCAGCAGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: PDSGKLRLRWWTEILTRPGTPVG*GPAAAS Trigger: GCTTGCTGCTGCTGGGCCTCAGCCTACAGGTGTGCC...TGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR GCA 90 bp | AACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAGGCACCTACAGTCCCACCGGGCTCACTGCACTaGTCTGGCCAGCAGGGGATG | + |
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Preference number: 4 (lower is better) Translates to: NTLHFYGSQTQEEAPTVPPGSLH*SGQQGM Trigger: CATCCCCTGCTGGCCAGAGCAGTGCAGTGAGCCCGG...TGGGACTGTAGGTGCCTCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR GCA 90 bp | AGCCCAGAAAACAGTACTGGCAGAAAGGCACTGAACAAGCCAACAAGTGGAGTCCCGGGCTCACTGCACTaGTCTGGCCAGCAGGGGATG | + |
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Preference number: 4 (lower is better) Translates to: SPENSTGRKALNKPTSGVPGSLH*SGQQGM Trigger: CATCCCCTGCTGGCCAGAGCAGTGCAGTGAGCCCGG...GACTCCACTTGTTGGCTTGTTCAGTGCCTTTCTGCCAGTACTGTTTTCTGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR TCA 90 bp | AACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAGGCACCTACAGTCCCAGCCAGGGAAGGGTCCTaGGCAGGGTCTCGGTGGATT | + |
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Preference number: 4 (lower is better) Translates to: NTLHFYGSQTQEEAPTVPAREGS*AGSRWI Trigger: AATCCACCGAGACCCTGCTCAGGACCCTTCCCTGGC...TGGGACTGTAGGTGCCTCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR GCA 90 bp | GGTTTCCAGCTGGAGCCCAGAAAACAGTACTGGCAGAAAGGCACTGAACAAGCCGAAAGGCTGTACCTGTaGCTGCGCTGTCCGGGATCT | + |
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Preference number: 4 (lower is better) Translates to: GFQLEPRKQYWQKGTEQAERLYL*LRCPGS Trigger: AGATCCCGGACAGCGCAGGCACAGGTACAGCCTTTC...GGCTTGTTCAGTGCCTTTCTGCCAGTACTGTTTTCTGGGCTCCAGCTGGAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR GCA 90 bp | CCAGATTCGGGGAAGCTGAGGTTAAGATGGTGGACTGAAATCTTGACTAGGCCACAGTGTGCGCGTAGGTaGCGGCCGGAGAAGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: PDSGKLRLRWWTEILTRPQCARR*RPEKHA Trigger: AGCATGCTTCTCCGGCCGGCACCTACGCGCACACTG...TGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR GCA 90 bp | CCAGATTCGGGGAAGCTGAGGTTAAGATGGTGGACTGAAATCTTGACTAGGCCACCCAGATGGCCTTGCTaGTGCCCCTTTAGGATCCGG | + |
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Preference number: 4 (lower is better) Translates to: PDSGKLRLRWWTEILTRPPRWPC*CPFRIR Trigger: CCGGATCCTAAAGGGGCAGCAGCAAGGCCATCTGGG...TGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR GCA 90 bp | GAAGTGGGTTTCCAGCTGGAGCCCAGAAAACAGTACTGGCAGAAAGGCACTGAAGGTCCCAGATGGCCTTaGTGCTGCCCCTTTAGGATC | + |
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Preference number: 4 (lower is better) Translates to: EVGFQLEPRKQYWQKGTEGPRWP*CCPFRI Trigger: GATCCTAAAGGGGCAGCAGCAAGGCCATCTGGGACC...TTCAGTGCCTTTCTGCCAGTACTGTTTTCTGGGCTCCAGCTGGAAACCCACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR GCA 90 bp | CCAGATTCGGGGAAGCTGAGGTTAAGATGGTGGACTGAAATCTTGACTAGGCCAGGCTGTACCTGTGCCTaGGCTGTCCGGGATCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: PDSGKLRLRWWTEILTRPGCTCA*AVRDLL Trigger: AAGCAGATCCCGGACAGCGCAGGCACAGGTACAGCC...TGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR GCA 90 bp | CAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAGGCACCGTAGCCCGGGCTCACTaGACTGCTCTGGCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: QEDKHSSFLWQPDTGGGTVARAH*TALASR Trigger: CCTGCTGGCCAGAGCAGTGCAGTGAGCCCGGGCTAC...GGTGCCTCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR TCA 90 bp | GATTCGGGGAAGCTGAGGTTAAGATGGTGGACTGAAATCTTGACTAGGCCAGACCGGTTCAGGGATGCCTaGATGAGCTCTGAGCGGTTC | + |
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Preference number: 4 (lower is better) Translates to: DSGKLRLRWWTEILTRPDRFRDA*MSSERF Trigger: GAACCGCTCAGAGCTCATTCAGGCATCCCTGAACCG...GTCTGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR GCA 90 bp | CCAGATTCGGGGAAGCTGAGGTTAAGATGGTGGACTGAAATCTTGACTAGGCCAGAAAGGCTGTACCTGTaGCTGCGCTGTCCGGGATCT | + |
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Preference number: 4 (lower is better) Translates to: PDSGKLRLRWWTEILTRPERLYL*LRCPGS Trigger: AGATCCCGGACAGCGCAGGCACAGGTACAGCCTTTC...TGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR GCA 90 bp | GAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGCCGGCCGGAGAAGCATaGTGCACCGACGTGGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: EGSKKINTLHFYGSQTQEPAGEA*CTDVVV Trigger: GACCACCACGTCGGTGCAGCATGCTTCTCCGGCCGG...CTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR GCA 90 bp | CAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAGGCACCCAGTGTGCGCGTAGGTaGCGGCCGGAGAAGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: QEDKHSSFLWQPDTGGGTQCARR*RPEKHA Trigger: AGCATGCTTCTCCGGCCGGCACCTACGCGCACACTG...GGTGCCTCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR CCA 90 bp | AGCCCAGAAAACAGTACTGGCAGAAAGGCACTGAACAAGCCAACAAGTGGAGTCTGCGTCCATCCAGCCTaGTTCCAGCCTGCTTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SPENSTGRKALNKPTSGVCVHPA*FQPAWC Trigger: ACACCAAGCAGGCTGGAACCAGGCTGGATGGACGCA...GACTCCACTTGTTGGCTTGTTCAGTGCCTTTCTGCCAGTACTGTTTTCTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR CCA 90 bp | GATTCGGGGAAGCTGAGGTTAAGATGGTGGACTGAAATCTTGACTAGGCCAGACCCTGCTGCTGGTACGTaGGGTTGCTGCTCTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: DSGKLRLRWWTEILTRPDPAAGT*GCCSLP Trigger: AGGAAGAGAGCAGCAACCCCACGTACCAGCAGCAGG...GTCTGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR CCA 90 bp | CAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAGGCACCCTCACTGCACTGCTCTaGCCAGCAGGGGATGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QEDKHSSFLWQPDTGGGTLTALL*PAGDAR Trigger: CCTGGCATCCCCTGCTGGCCAGAGCAGTGCAGTGAG...GGTGCCTCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR CCA 90 bp | AGCCCAGAAAACAGTACTGGCAGAAAGGCACTGAACAAGCCAACAAGTGGAGTCACAGGCACAGCAAGGTaGACATGTAGCCCGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: SPENSTGRKALNKPTSGVTGTAR*TCSPGS Trigger: TGAGCCCGGGCTACATGTCCACCTTGCTGTGCCTGT...GACTCCACTTGTTGGCTTGTTCAGTGCCTTTCTGCCAGTACTGTTTTCTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR TCA 90 bp | CAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAGGCACCTGCTCTCTTCCTCAGTaGCATCAGCCCGGGCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: QEDKHSSFLWQPDTGGGTCSLPQ*HQPGRH Trigger: ATGGCGCCCGGGCTGATGTCACTGAGGAAGAGAGCA...GGTGCCTCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR GCA 90 bp | AACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAGGCACCTACAGTCCCAAGATGGCCTTGCTGCTaGCCCTTTAGGATCCGGGTA | + |
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Preference number: 4 (lower is better) Translates to: NTLHFYGSQTQEEAPTVPRWPCC*PFRIRV Trigger: TACCCGGATCCTAAAGGGGCAGCAGCAAGGCCATCT...TGGGACTGTAGGTGCCTCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR CCA 90 bp | GAAGTGGGTTTCCAGCTGGAGCCCAGAAAACAGTACTGGCAGAAAGGCACTGAAGAGCCAGTCCAAAGATaGAAGCCCCTCTCTGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: EVGFQLEPRKQYWQKGTEEPVQR*KPLSVC Trigger: ACACACAGAGAGGGGCTTCCATCTTTGGACTGGCTC...TTCAGTGCCTTTCTGCCAGTACTGTTTTCTGGGCTCCAGCTGGAAACCCACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR TCA 90 bp | AACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAGGCACCTACAGTCCCATCAGGGATGCCTGAATaGGCTCTGAGCGGTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: NTLHFYGSQTQEEAPTVPSGMPE*ALSGSK Trigger: TTTGGAACCGCTCAGAGCTCATTCAGGCATCCCTGA...TGGGACTGTAGGTGCCTCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR TCA 90 bp | GATTCGGGGAAGCTGAGGTTAAGATGGTGGACTGAAATCTTGACTAGGCCAGACTGTCCTGCTCACTGGTaGGCTTGTCTGCCTTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: DSGKLRLRWWTEILTRPDCPAHW*ACLPCQ Trigger: TTGACAAGGCAGACAAGCTCACCAGTGAGCAGGACA...GTCTGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR TCA 90 bp | AACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAGGCACCTACAGTCCCATGTCCTGCTCACTGGTaGGCTTGTCTGCCTTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: NTLHFYGSQTQEEAPTVPCPAHW*ACLPCQ Trigger: TTGACAAGGCAGACAAGCTCACCAGTGAGCAGGACA...TGGGACTGTAGGTGCCTCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR GCA 90 bp | GAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGCCCAGATGGCCTTGCTaGTGCCCCTTTAGGATCCGG | + |
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Preference number: 4 (lower is better) Translates to: EGSKKINTLHFYGSQTQEPRWPC*CPFRIR Trigger: CCGGATCCTAAAGGGGCAGCAGCAAGGCCATCTGGG...CTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR GCA 90 bp | AACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAGGCACCTACAGTCCCAGCGCTGTCCGGGATCTaGTTGTCTGTGTTGTATGTC | + |
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Preference number: 4 (lower is better) Translates to: NTLHFYGSQTQEEAPTVPALSGI*LSVLYV Trigger: GACATACAACACAGACAAGCAGATCCCGGACAGCGC...TGGGACTGTAGGTGCCTCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR GCA 90 bp | GAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGGCTGTACCTGTGCCTaGGCTGTCCGGGATCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: EGSKKINTLHFYGSQTQEGCTCA*AVRDLL Trigger: AAGCAGATCCCGGACAGCGCAGGCACAGGTACAGCC...CTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR CCA 90 bp | GGTTTCCAGCTGGAGCCCAGAAAACAGTACTGGCAGAAAGGCACTGAACAAGCCTGGATATTCCTGGTCTaGTGTCCCCTTGGGAAACAT | + |
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Preference number: 4 (lower is better) Translates to: GFQLEPRKQYWQKGTEQAWIFLV*CPLGKH Trigger: ATGTTTCCCAAGGGGACACCAGACCAGGAATATCCA...GGCTTGTTCAGTGCCTTTCTGCCAGTACTGTTTTCTGGGCTCCAGCTGGAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS-3UTR CCA 90 bp | CAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAGGCACCACAGGCACAGCAAGGTaGACATGTAGCCCGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QEDKHSSFLWQPDTGGGTTGTAR*TCSPGS Trigger: TGAGCCCGGGCTACATGTCCACCTTGCTGTGCCTGT...GGTGCCTCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGCACACCTGTAGGCTaGGGCCCAGCAGCAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KRRVQEDKHSSFLWQPDTGTPVG*GPAAAS Trigger: GCTTGCTGCTGCTGGGCCTCAGCCTACAGGTGTGCC...TGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGAAAACAGTACTGGCAGAAAGGCACTGAACAAGCCAACAAGTGGAGTCAGGATCATCGTGTCCTaGTCACTGGTGAGCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPENSTGRKALNKPTSGVRIIVS*SLVSLS Trigger: AGACAAGCTCACCAGTGAGCAGGACACGATGATCCT...GACTCCACTTGTTGGCTTGTTCAGTGCCTTTCTGCCAGTACTGTTTTCTGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR GCA 90 bp | GAAGTGGGTTTCCAGCTGGAGCCCAGAAAACAGTACTGGCAGAAAGGCACTGAACATCAACATTTTCCCTaGCAACAGGCACAGCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EVGFQLEPRKQYWQKGTEHQHFP*QQAQQG Trigger: ACCTTGCTGTGCCTGTTGGCAGGGAAAATGTTGATG...TTCAGTGCCTTTCTGCCAGTACTGTTTTCTGGGCTCCAGCTGGAAACCCACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR CCA 90 bp | GATTCGGGGAAGCTGAGGTTAAGATGGTGGACTGAAATCTTGACTAGGCCAGACTCAGTTGGATATTCCTaGTCTGGTGTCCCCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSGKLRLRWWTEILTRPDSVGYS*SGVPLG Trigger: TCCCAAGGGGACACCAGACCAGGAATATCCAACTGA...GTCTGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR TCA 90 bp | GAAGTGGGTTTCCAGCTGGAGCCCAGAAAACAGTACTGGCAGAAAGGCACTGAATTCTTAGCTGATGTCTaGATGGGCTTCAGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EVGFQLEPRKQYWQKGTEFLADV*MGFSFL Trigger: CAAGAAGCTGAAGCCCATTCAGACATCAGCTAAGAA...TTCAGTGCCTTTCTGCCAGTACTGTTTTCTGGGCTCCAGCTGGAAACCCACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAAGATGGCCTTGCTGCTaGCCCTTTAGGATCCGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RVQEDKHSSFLWQPDTGGRWPCC*PFRIRV Trigger: TACCCGGATCCTAAAGGGGCAGCAGCAAGGCCATCT...TCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR GCA 90 bp | AACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAGGCACCTACAGTCCCATCCCACAGACTTTCCTaGTTTCTTAGCACGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NTLHFYGSQTQEEAPTVPSHRLS*FLSTVH Trigger: ATGCACCGTGCTAAGAAAGCAGGAAAGTCTGTGGGA...TGGGACTGTAGGTGCCTCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR CCA 90 bp | GATTCGGGGAAGCTGAGGTTAAGATGGTGGACTGAAATCTTGACTAGGCCAGACTGGATATTCCTGGTCTaGTGTCCCCTTGGGAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: DSGKLRLRWWTEILTRPDWIFLV*CPLGKH Trigger: ATGTTTCCCAAGGGGACACCAGACCAGGAATATCCA...GTCTGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACACTCACTGCACTGCTCTaGCCAGCAGGGGATGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRRVQEDKHSSFLWQPDTLTALL*PAGDAR Trigger: CCTGGCATCCCCTGCTGGCCAGAGCAGTGCAGTGAG...TGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTCTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR TCA 90 bp | CCAGATTCGGGGAAGCTGAGGTTAAGATGGTGGACTGAAATCTTGACTAGGCCATTCTTAGCTGATGTCTaGATGGGCTTCAGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PDSGKLRLRWWTEILTRPFLADV*MGFSFL Trigger: CAAGAAGCTGAAGCCCATTCAGACATCAGCTAAGAA...TGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACATGCTCTCTTCCTCAGTaGCATCAGCCCGGGCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KRRVQEDKHSSFLWQPDTCSLPQ*HQPGRH Trigger: ATGGCGCCCGGGCTGATGTCACTGAGGAAGAGAGCA...TGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTCTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAGCCAGTCCAAAGATaGAAGCCCCTCTCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EGSKKINTLHFYGSQTQEEPVQR*KPLSVC Trigger: ACACACAGAGAGGGGCTTCCATCTTTGGACTGGCTC...CTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACACGGTTCAGGGATGCCTaGATGAGCTCTGAGCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KRRVQEDKHSSFLWQPDTRFRDA*MSSERF Trigger: GAACCGCTCAGAGCTCATTCAGGCATCCCTGAACCG...TGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAAGGATCATCGTGTCCTaGTCACTGGTGAGCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVQEDKHSSFLWQPDTGGRIIVS*SLVSLS Trigger: AGACAAGCTCACCAGTGAGCAGGACACGATGATCCT...TCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACACCTGCTGCTGGTACGTaGGGTTGCTGCTCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRRVQEDKHSSFLWQPDTPAAGT*GCCSLP Trigger: AGGAAGAGAGCAGCAACCCCACGTACCAGCAGCAGG...TGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGCGCTGTCCGGGATCTaGTTGTCTGTGTTGTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KRRVQEDKHSSFLWQPDTALSGI*LSVLYV Trigger: GACATACAACACAGACAAGCAGATCCCGGACAGCGC...TGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACATCAGTTGGATATTCCTaGTCTGGTGTCCCCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KRRVQEDKHSSFLWQPDTSVGYS*SGVPLG Trigger: TCCCAAGGGGACACCAGACCAGGAATATCCAACTGA...TGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTCTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACATCCCACAGACTTTCCTaGTTTCTTAGCACGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KRRVQEDKHSSFLWQPDTSHRLS*FLSTVH Trigger: ATGCACCGTGCTAAGAAAGCAGGAAAGTCTGTGGGA...TGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTCTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACACATCAACATTTTCCCTaGCAACAGGCACAGCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KRRVQEDKHSSFLWQPDTHQHFP*QQAQQG Trigger: ACCTTGCTGTGCCTGTTGGCAGGGAAAATGTTGATG...TGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTCTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS GCA 90 bp | CCAACAGGCACAGCAAGGTGGACATGTAGCCCGGGCTCACTGCACTaGTCTGGCCAGCAGGGGATGCCAGGCCGCAGTCAGTGTAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PTGTARWTCSPGSLH*SGQQGMPGRSQCRA Trigger: AGCCCTACACTGACTGCGGCCTGGCATCCCCTGCTGGCCAGAGCAGTGCAGTGAGCCCGGGCTACATGTCCACCTTGCTGTGCCTGTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS GCA 90 bp | CCCTGCCAACAGGCACAGCAAGGTGGACATGTAGCCCGGGCTCACTaGACTGCTCTGGCCAGCAGGGGATGCCAGGCCGCAGTCAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PCQQAQQGGHVARAH*TALASRGCQAAVSV Trigger: TACACTGACTGCGGCCTGGCATCCCCTGCTGGCCAGAGCAGTGCAGTGAGCCCGGGCTACATGTCCACCTTGCTGTGCCTGTTGGCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS TCA 90 bp | CAGCAGCCTGCTGCTGGTACGTGGGGTTGCTGCTCTCTTCCTCAGTaGCATCAGCCCGGGCGCCATTATGGAGCTTGTAACCAGGACCGT | + |
|
Preference number: 5 (lower is better) Translates to: QQPAAGTWGCCSLPQ*HQPGRHYGACNQDR Trigger: ACGGTCCTGGTTACAAGCTCCATAATGGCGCCCGGGCTGATGTCACTGAGGAAGAGAGCAGCAACCCCACGTACCAGCAGCAGGCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS TCA 90 bp | CATGAGGTGTGTCACAGATCGGTTCAGGGATGCCTGAATGAGCTCTaGGCGGTTCCAAACATACCGGGCTCCCTGGTGCTTTGCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HEVCHRSVQGCLNEL*AVPNIPGSLVLCQP Trigger: TGGCTGGCAAAGCACCAGGGAGCCCGGTATGTTTGGAACCGCTCAGAGCTCATTCAGGCATCCCTGAACCGATCTGTGACACACCTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS TCA 90 bp | TCAAAGAGGCCCATGAGGTGTGTCACAGATCGGTTCAGGGATGCCTaGATGAGCTCTGAGCGGTTCCAAACATACCGGGCTCCCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SKRPMRCVTDRFRDA*MSSERFQTYRAPWC Trigger: GCACCAGGGAGCCCGGTATGTTTGGAACCGCTCAGAGCTCATTCAGGCATCCCTGAACCGATCTGTGACACACCTCATGGGCCTCTTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS GCA 90 bp | ACCCCGCAGAGAAAGGCTGTACCTGTGCCTGCGCTGTCCGGGATCTaGTTGTCTGTGTTGTATGTCTTGGACAGAGCCATGTGTGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TPQRKAVPVPALSGI*LSVLYVLDRAMCGK Trigger: CTTTCCACACATGGCTCTGTCCAAGACATACAACACAGACAAGCAGATCCCGGACAGCGCAGGCACAGGTACAGCCTTTCTCTGCGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS CCA 90 bp | GGTGCTTTGCCAGCCACTCTTGAACTAGGTTGCGTCCATCCAGCCTaGTTCCAGCCTGCTTGGTGTCAGTTGGATATTCCTGGTCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GALPATLELGCVHPA*FQPAWCQLDIPGLV Trigger: CACCAGACCAGGAATATCCAACTGACACCAAGCAGGCTGGAACCAGGCTGGATGGACGCAACCTAGTTCAAGAGTGGCTGGCAAAGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS CCA 90 bp | ATGTGTGGAAAGCGATCCATAGCTAGCTGTGTCTCAGGTCCCAGATaGCCTTGCTGCTGCCCCTTTAGGATCCGGGTAGCGGTTACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: MCGKRSIASCVSGPR*PCCCPFRIRVAVTV Trigger: TACAGTAACCGCTACCCGGATCCTAAAGGGGCAGCAGCAAGGCCATCTGGGACCTGAGACACAGCTAGCTATGGATCGCTTTCCACACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR CAA 90 bp | GATTCGGGGAAGCTGAGGTTAAGATGGTGGACTGAAATCTTGACTAGGCCAGACGGGCTCCCTGGTGCTTaGCCAGCCACTCTTGAACTA | + |
|
Preference number: 5 (lower is better) Translates to: DSGKLRLRWWTEILTRPDGLPGA*PATLEL Trigger: TAGTTCAAGAGTGGCTGGCAAAGCACCAGGGAGCCC...GTCTGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCAGAAAACAGTACTGGCAGAAAGGCACTGAACAAGCCAACAAGTGGAGTCGGGCTCCCTGGTGCTTaGCCAGCCACTCTTGAACTA | + |
|
Preference number: 5 (lower is better) Translates to: SPENSTGRKALNKPTSGVGLPGA*PATLEL Trigger: TAGTTCAAGAGTGGCTGGCAAAGCACCAGGGAGCCC...GACTCCACTTGTTGGCTTGTTCAGTGCCTTTCTGCCAGTACTGTTTTCTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR CAA 90 bp | GATTCGGGGAAGCTGAGGTTAAGATGGTGGACTGAAATCTTGACTAGGCCAGACTGCTGGTACGTGGGGTaGCTGCTCTCTTCCTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DSGKLRLRWWTEILTRPDCWYVG*LLSSSV Trigger: CACTGAGGAAGAGAGCAGCAACCCCACGTACCAGCA...GTCTGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR CAA 90 bp | CCAGATTCGGGGAAGCTGAGGTTAAGATGGTGGACTGAAATCTTGACTAGGCCATGCTGGTACGTGGGGTaGCTGCTCTCTTCCTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PDSGKLRLRWWTEILTRPCWYVG*LLSSSV Trigger: CACTGAGGAAGAGAGCAGCAACCCCACGTACCAGCA...TGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTCCAGCTGGAGCCCAGAAAACAGTACTGGCAGAAAGGCACTGAACAAGCCCCAATGACCTTCATGTaGGTTTTGACCCCGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GFQLEPRKQYWQKGTEQAPMTFM*VLTPQR Trigger: TCTCTGCGGGGTCAAAACCAACATGAAGGTCATTGG...GGCTTGTTCAGTGCCTTTCTGCCAGTACTGTTTTCTGGGCTCCAGCTGGAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR CAA 90 bp | CCAGATTCGGGGAAGCTGAGGTTAAGATGGTGGACTGAAATCTTGACTAGGCCATTGCCATCCTCAGCCTaGAAGGGAGCCAGTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PDSGKLRLRWWTEILTRPLPSSA*KGASPK Trigger: CTTTGGACTGGCTCCCTTCAAGGCTGAGGATGGCAA...TGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR CAA 90 bp | GATTCGGGGAAGCTGAGGTTAAGATGGTGGACTGAAATCTTGACTAGGCCAGACTCTGTGTTGTATGTCTaGGACAGAGCCATGTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DSGKLRLRWWTEILTRPDSVLYV*DRAMCG Trigger: TCCACACATGGCTCTGTCCAAGACATACAACACAGA...GTCTGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR CAA 90 bp | CCAGATTCGGGGAAGCTGAGGTTAAGATGGTGGACTGAAATCTTGACTAGGCCAATCTGCTTGTCTGTGTaGTATGTCTTGGACAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PDSGKLRLRWWTEILTRPICLSV*YVLDRA Trigger: GGCTCTGTCCAAGACATACAACACAGACAAGCAGAT...TGGCCTAGTCAAGATTTCAGTCCACCATCTTAACCTCAGCTTCCCCGAATCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGTGGTCTGGTGTCCCCTaGGGAAACATGAACTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: EGSKKINTLHFYGSQTQEWSGVP*GNMNLR Trigger: CCGCAAGTTCATGTTTCCCAAGGGGACACCAGACCA...CTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGTTGCCATCCTCAGCCTaGAAGGGAGCCAGTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: EGSKKINTLHFYGSQTQELPSSA*KGASPK Trigger: CTTTGGACTGGCTCCCTTCAAGGCTGAGGATGGCAA...CTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR CAA 90 bp | CAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGGAGGCACCATCTGCTTGTCTGTGTaGTATGTCTTGGACAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QEDKHSSFLWQPDTGGGTICLSV*YVLDRA Trigger: GGCTCTGTCCAAGACATACAACACAGACAAGCAGAT...GGTGCCTCCTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGGTCCAAGAAGATAAACACTCTTCATTTTTATGGCAGCCAGACACAGGAGTCTGTGTTGTATGTCTaGGACAGAGCCATGTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: EGSKKINTLHFYGSQTQESVLYV*DRAMCG Trigger: TCCACACATGGCTCTGTCCAAGACATACAACACAGA...CTCCTGTGTCTGGCTGCCATAAAAATGAAGAGTGTTTATCTTCTTGGACCCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS GCA 72 bp | CAGGCACAGCAAGGTGGACATGTAGCCCGGGCTCACTaGACTGCTCTGGCCAGCAGGGGATGCCAGGCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: QAQQGGHVARAH*TALASRGCQAA Trigger: TGCGGCCTGGCATCCCCTGCTGGCCAGAGCAGTGCAGTGAGCCCGGGCTACATGTCCACCTTGCTGTGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS GCA 72 bp | CCGAGTACCAACCACGGTTCACAGTGTGCGCGTAGGTaGCGGCCGGAGAAGCATGCTGCACCGACGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PSTNHGSQCARR*RPEKHAAPTWW Trigger: CCACCACGTCGGTGCAGCATGCTTCTCCGGCCGGCACCTACGCGCACACTGTGAACCGTGGTTGGTACTCGG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS GCA 72 bp | ACAGCAAGGTGGACATGTAGCCCGGGCTCACTGCACTaGTCTGGCCAGCAGGGGATGCCAGGCCGCAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: TARWTCSPGSLH*SGQQGMPGRSQ Trigger: CTGACTGCGGCCTGGCATCCCCTGCTGGCCAGAGCAGTGCAGTGAGCCCGGGCTACATGTCCACCTTGCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS CAA 72 bp | GACAGGGGTACAGCAGCCTGCTGCTGGTACGTGGGGTaGCTGCTCTCTTCCTCAGTGACATCAGCCCGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: DRGTAACCWYVG*LLSSSVTSARA Trigger: CGCCCGGGCTGATGTCACTGAGGAAGAGAGCAGCAACCCCACGTACCAGCAGCAGGCTGCTGTACCCCTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
||
| CDS GCA 72 bp | CCGCTGTGGGTCTCTGACGACAGGGGTACAGCAGCCTaGTGCTGGTACGTGGGGTTGCTGCTCTCTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PLWVSDDRGTAA*CWYVGLLLSSS Trigger: TGAGGAAGAGAGCAGCAACCCCACGTACCAGCAGCAGGCTGCTGTACCCCTGTCGTCAGAGACCCACAGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS CAA 90 bp | GTCTCTGACGACAGGGGTACAGCAGCCTGCTGCTGGTACGTGGGGTaGCTGCTCTCTTCCTCAGTGACATCAGCCCGGGCGCCATTATGG | + |
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Preference number: 6 (lower is better) Translates to: VSDDRGTAACCWYVG*LLSSSVTSARAPLW Trigger: CCATAATGGCGCCCGGGCTGATGTCACTGAGGAAGAGAGCAGCAACCCCACGTACCAGCAGCAGGCTGCTGTACCCCTGTCGTCAGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS GCA 72 bp | CTGTGGGTCTCTGACGACAGGGGTACAGCAGCCTGCTaGTGGTACGTGGGGTTGCTGCTCTCTTCCTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: LWVSDDRGTAAC*WYVGLLLSSSV Trigger: CACTGAGGAAGAGAGCAGCAACCCCACGTACCAGCAGCAGGCTGCTGTACCCCTGTCGTCAGAGACCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS CCA 72 bp | TGGGTCTCTGACGACAGGGGTACAGCAGCCTGCTGCTaGTACGTGGGGTTGCTGCTCTCTTCCTCAGTGACA | + |
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Preference number: 6 (lower is better) Translates to: WVSDDRGTAACC*YVGLLLSSSVT Trigger: TGTCACTGAGGAAGAGAGCAGCAACCCCACGTACCAGCAGCAGGCTGCTGTACCCCTGTCGTCAGAGACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS TCA 72 bp | GCTGCTGGTACGTGGGGTTGCTGCTCTCTTCCTCAGTaGCATCAGCCCGGGCGCCATTATGGAGCTTGTAAC | + |
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Preference number: 6 (lower is better) Translates to: AAGTWGCCSLPQ*HQPGRHYGACN Trigger: GTTACAAGCTCCATAATGGCGCCCGGGCTGATGTCACTGAGGAAGAGAGCAGCAACCCCACGTACCAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS CCA 72 bp | AAGCGATCCATAGCTAGCTGTGTCTCAGGTCCCAGATaGCCTTGCTGCTGCCCCTTTAGGATCCGGGTAGCG | + |
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Preference number: 6 (lower is better) Translates to: KRSIASCVSGPR*PCCCPFRIRVA Trigger: CGCTACCCGGATCCTAAAGGGGCAGCAGCAAGGCCATCTGGGACCTGAGACACAGCTAGCTATGGATCGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS CCA 72 bp | GCATCAACATTTTCCCTGCCAACAGGCACAGCAAGGTaGACATGTAGCCCGGGCTCACTGCACTGCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: ASTFSLPTGTAR*TCSPGSLHCSG Trigger: GCCAGAGCAGTGCAGTGAGCCCGGGCTACATGTCCACCTTGCTGTGCCTGTTGGCAGGGAAAATGTTGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS CAA 72 bp | CTGAGCGGTTCCAAACATACCGGGCTCCCTGGTGCTTaGCCAGCCACTCTTGAACTAGGTTGCGTCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: LSGSKHTGLPGA*PATLELGCVHP Trigger: TGGATGGACGCAACCTAGTTCAAGAGTGGCTGGCAAAGCACCAGGGAGCCCGGTATGTTTGGAACCGCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS TCA 72 bp | TGTCACAGATCGGTTCAGGGATGCCTGAATGAGCTCTaGGCGGTTCCAAACATACCGGGCTCCCTGGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: CHRSVQGCLNEL*AVPNIPGSLVL Trigger: AAGCACCAGGGAGCCCGGTATGTTTGGAACCGCTCAGAGCTCATTCAGGCATCCCTGAACCGATCTGTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS TCA 72 bp | CCCATGAGGTGTGTCACAGATCGGTTCAGGGATGCCTaGATGAGCTCTGAGCGGTTCCAAACATACCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: PMRCVTDRFRDA*MSSERFQTYRA Trigger: AGCCCGGTATGTTTGGAACCGCTCAGAGCTCATTCAGGCATCCCTGAACCGATCTGTGACACACCTCATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS GCA 72 bp | ATAGCTAGCTGTGTCTCAGGTCCCAGATGGCCTTGCTaGTGCCCCTTTAGGATCCGGGTAGCGGTTACTGTA | + |
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Preference number: 6 (lower is better) Translates to: IASCVSGPRWPC*CPFRIRVAVTV Trigger: TACAGTAACCGCTACCCGGATCCTAAAGGGGCAGCAGCAAGGCCATCTGGGACCTGAGACACAGCTAGCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS CAA 72 bp | CCTGTGCCTGCGCTGTCCGGGATCTGCTTGTCTGTGTaGTATGTCTTGGACAGAGCCATGTGTGGAAAGCGA | + |
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Preference number: 6 (lower is better) Translates to: PVPALSGICLSV*YVLDRAMCGKR Trigger: TCGCTTTCCACACATGGCTCTGTCCAAGACATACAACACAGACAAGCAGATCCCGGACAGCGCAGGCACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS GCA 72 bp | AGAAAGGCTGTACCTGTGCCTGCGCTGTCCGGGATCTaGTTGTCTGTGTTGTATGTCTTGGACAGAGCCATG | + |
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Preference number: 6 (lower is better) Translates to: RKAVPVPALSGI*LSVLYVLDRAM Trigger: CATGGCTCTGTCCAAGACATACAACACAGACAAGCAGATCCCGGACAGCGCAGGCACAGGTACAGCCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS CAA 72 bp | AAGGCTGTACCTGTGCCTGCGCTGTCCGGGATCTGCTaGTCTGTGTTGTATGTCTTGGACAGAGCCATGTGT | + |
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Preference number: 6 (lower is better) Translates to: KAVPVPALSGIC*SVLYVLDRAMC Trigger: ACACATGGCTCTGTCCAAGACATACAACACAGACAAGCAGATCCCGGACAGCGCAGGCACAGGTACAGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS GCA 72 bp | CACGATAGGCTACAGTTTCATGGTGGCCATGGTCGATaGGACCCCCTTCCACAAAGAGATAGAAGCCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: HDRLQFHGGHGR*DPLPQRDRSLW Trigger: CCAAAGGCTTCTATCTCTTTGTGGAAGGGGGTCGCATCGACCATGGCCACCATGAAACTGTAGCCTATCGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS CAA 72 bp | GCGCTGTCCGGGATCTGCTTGTCTGTGTTGTATGTCTaGGACAGAGCCATGTGTGGAAAGCGATCCATAGCT | + |
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Preference number: 6 (lower is better) Translates to: ALSGICLSVLYV*DRAMCGKRSIA Trigger: AGCTATGGATCGCTTTCCACACATGGCTCTGTCCAAGACATACAACACAGACAAGCAGATCCCGGACAGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS CAA 72 bp | CCAGGACCGTTGCCGTATAGTATCGAGGTAAAGGATTaGCCATCCTCAGCCTTGAAGGGAGCCAGTCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: PGPLPYSIEVKD*PSSALKGASPK Trigger: CTTTGGACTGGCTCCCTTCAAGGCTGAGGATGGCAAATCCTTTACCTCGATACTATACGGCAACGGTCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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| CDS CAA 72 bp | TATAGTATCGAGGTAAAGGATTTGCCATCCTCAGCCTaGAAGGGAGCCAGTCCAAAGATGGAAGCCCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: YSIEVKDLPSSA*KGASPKMEAPL Trigger: GAGAGGGGCTTCCATCTTTGGACTGGCTCCCTTCAAGGCTGAGGATGGCAAATCCTTTACCTCGATACTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027455.13 ENSMUST00000188310.2 |
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