Pregenerated sensors for ALPL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028766Ensembl transcript IDs: ENSMUST00000030551.11, ENSMUST00000133473.2, ENSMUST00000139951.8, ENSMUST00000153588.8
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATTCCAAACAGGAGAGCCACTTCAGTGAAGGGTTGGCGAGTCTCTaGAATTGGGTGGGGAGTGTGTGTGTGTGTCCTGTCCGGCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: YSKQESHFSEGLASL*NWVGSVCVCPVRLE Trigger: CTCCAGCCGGACAGGACACACACACACACTCCCCACCCAATTGCAGAGACTCGCCAACCCTTCACTGAAGTGGCTCTCCTGTTTGGAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| 3UTR-3UTR GCA 90 bp | CTGTTCCTGCTGGAAGTTGCCTGGACCTCTCCCTTGAGTGTGGGCTGCCCGGTGGAGCTGGCTGTCCATTaGGGGCTTGTGGGACCTGCA | + |
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Preference number: 2 (lower is better) Translates to: LFLLEVAWTSPLSVGCPVELAVH*GLVGPA Trigger: TGCAGGTCCCACAAGCCCGCAATGGACAGCCAGCTC...CACCGGGCAGCCCACACTCAAGGGAGAGGTCCAGGCAACTTCCAGCAGGAACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCCATGGAGGATTCCAGATACAGGCAAGGCAGATAGCGAACTTCTGTTCCGTGTGGGCTGCCCGGTaGTGGGCCACAAAAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LAHGGFQIQARQIANFCSVWAAR*WATKGG Trigger: CCCTCCTTTTGTGGCCCACCACCGGGCAGCCCACAC...GGAACAGAAGTTCGCTATCTGCCTTGCCTGTATCTGGAATCCTCCATGGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| 3UTR-3UTR CCA 90 bp | TCTGGCCCATGGAGGATTCCAGATACAGGCAAGGCAGATAGCGAACTTCTGTTCCTGCTGGAAGTTGCCTaGACCTCTCCCTTGAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SGPWRIPDTGKADSELLFLLEVA*TSPLSV Trigger: CACACTCAAGGGAGAGGTCCAGGCAACTTCCAGCAG...GAACAGAAGTTCGCTATCTGCCTTGCCTGTATCTGGAATCCTCCATGGGCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| 3UTR GCA 72 bp | CTGGAAGTTGCCTGGACCTCTCCCTTGAGTGTGGGCTaGCCGGTGGTGGGCCACAAAAGGAGGGGAGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: LEVAWTSPLSVG*PVVGHKRRGAG Trigger: GCCAGCTCCCCTCCTTTTGTGGCCCACCACCGGGCAGCCCACACTCAAGGGAGAGGTCCAGGCAACTTCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| 3UTR CCA 72 bp | ACCCTGGGTAGACAGCCAACCCCGGAGGTGGCTTCCTaGGAGTCTCATCCTGAGCAGACCTGGTCTTCCCCC | + |
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Preference number: 3 (lower is better) Translates to: TLGRQPTPEVAS*ESHPEQTWSSP Trigger: GGGGGAAGACCAGGTCTGCTCAGGATGAGACTCCCAGGAAGCCACCTCCGGGGTTGGCTGTCTACCCAGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| 3UTR CCA 72 bp | GCAGATAGCGAACTTCTGTTCCTGCTGGAAGTTGCCTaGACCTCTCCCTTGAGTGTGGGCTGCCCGGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: ADSELLFLLEVA*TSPLSVGCPVV Trigger: CACCACCGGGCAGCCCACACTCAAGGGAGAGGTCCAGGCAACTTCCAGCAGGAACAGAAGTTCGCTATCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| 3UTR TCA 72 bp | CCCACCCCGCTATTCCAAACAGGAGAGCCACTTCAGTaGAGGGTTGGCGAGTCTCTGCAATTGGGTGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: PTPLFQTGEPLQ*RVGESLQLGGE Trigger: CTCCCCACCCAATTGCAGAGACTCGCCAACCCTTCACTGAAGTGGCTCTCCTGTTTGGAATAGCGGGGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| 3UTR CCA 72 bp | GCTATTCCAAACAGGAGAGCCACTTCAGTGAAGGGTTaGCGAGTCTCTGCAATTGGGTGGGGAGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: AIPNRRATSVKG*RVSAIGWGVCV Trigger: CACACACACTCCCCACCCAATTGCAGAGACTCGCCAACCCTTCACTGAAGTGGCTCTCCTGTTTGGAATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR CCA 90 bp | GTGTGGGCTGCCCGGTGGTGGGCCACAAAAGGAGGGGAGCTGGCTGTCCATTGCAAGCAGCAGGGCCCCTaGGGAGGGTGCGCTCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: VWAARWWATKGGELAVHCKQQGP*GGCAPR Trigger: TCTGGGAGCGCACCCTCCCCAGGGGCCCTGCTGCTT...GCAATGGACAGCCAGCTCCCCTCCTTTTGTGGCCCACCACCGGGCAGCCCACAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR GCA 90 bp | CTGCCCGGTGGTGGGCCACAAAAGGAGGGGAGCTGGCTGTCCATTGCGGGCTTGCGTGCGCTCTGTGGCTaGGCTCACTCCCACTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: LPGGGPQKEGSWLSIAGLRALCG*AHSHCA Trigger: GGCACAGTGGGAGTGAGCGCAGCCACAGAGCGCACG...CAAGCCCGCAATGGACAGCCAGCTCCCCTCCTTTTGTGGCCCACCACCGGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR GCA 90 bp | GTGTGGGCTGCCCGGTGGTGGGCCACAAAAGGAGGGGAGCTGGCTGTCCATTGCAGTAGGCAGTGGCAGTaGCCGCGCTGTCAGGGACCT | + |
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Preference number: 4 (lower is better) Translates to: VWAARWWATKGGELAVHCSRQWQ*PRCQGP Trigger: AGGTCCCTGACAGCGCGGGCACTGCCACTGCCTACT...GCAATGGACAGCCAGCTCCCCTCCTTTTGTGGCCCACCACCGGGCAGCCCACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR GCA 90 bp | GCCTGGACCTCTCCCTTGAGTGTGGGCTGCCCGGTGGTGGGCCACAAAAGGAGGCGCTCACTCCCACTGTaGCCTCGTTGGCCTTCACGC | + |
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Preference number: 4 (lower is better) Translates to: AWTSPLSVGCPVVGHKRRRSLPL*PRWPSR Trigger: GCGTGAAGGCCAACGAGGGCACAGTGGGAGTGAGCG...CCTCCTTTTGTGGCCCACCACCGGGCAGCCCACACTCAAGGGAGAGGTCCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR CCA 90 bp | TGCCCGGTGGTGGGCCACAAAAGGAGGGGAGCTGGCTGTCCATTGCGGGCTTGTCCACCGTGGGTCTCATaGCGCAGGGGAACAGCGGAC | + |
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Preference number: 4 (lower is better) Translates to: CPVVGHKRRGAGCPLRACPPWVS*RRGTAD Trigger: GTCCGCTGTTCCCCTGCGCCATGAGACCCACGGTGG...ACAAGCCCGCAATGGACAGCCAGCTCCCCTCCTTTTGTGGCCCACCACCGGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR CCA 90 bp | GCCTGGACCTCTCCCTTGAGTGTGGGCTGCCCGGTGGTGGGCCACAAAAGGAGGATGTCCTTGCAGCCCTaGCTCAGAGCCTCTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: AWTSPLSVGCPVVGHKRRMSLQP*LRASGG Trigger: GCCACCAGAGGCTCTGAGCCAGGGCTGCAAGGACAT...CCTCCTTTTGTGGCCCACCACCGGGCAGCCCACACTCAAGGGAGAGGTCCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR CCA 90 bp | GTGTGGGCTGCCCGGTGGTGGGCCACAAAAGGAGGGGAGCTGGCTGTCCATTGCACGTCTTCTCCACCGTaGGTCTCATGGCGCAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: VWAARWWATKGGELAVHCTSSPP*VSWRRG Trigger: TCCCCTGCGCCATGAGACCCACGGTGGAGAAGACGT...GCAATGGACAGCCAGCTCCCCTCCTTTTGTGGCCCACCACCGGGCAGCCCACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR TCA 90 bp | CTGCCCGGTGGTGGGCCACAAAAGGAGGGGAGCTGGCTGTCCATTGCGGGCTTGGTGACCTCATTGCCCTaGGTGGTGTTGCATCGCGTG | + |
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Preference number: 4 (lower is better) Translates to: LPGGGPQKEGSWLSIAGLVTSLP*VVLHRV Trigger: CACGCGATGCAACACCACTCAGGGCAATGAGGTCAC...CAAGCCCGCAATGGACAGCCAGCTCCCCTCCTTTTGTGGCCCACCACCGGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR GCA 90 bp | GGCCACAAAAGGAGGGGAGCTGGCTGTCCATTGCGGGCTTGTGGGACCTGCACCGGATGTCATGGCGCCTaGCTTGCCAATGGCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: GHKRRGAGCPLRACGTCTGCHGA*LANGLV Trigger: GACCAGGCCATTGGCAAGGCAGGCGCCATGACATCC...GGTGCAGGTCCCACAAGCCCGCAATGGACAGCCAGCTCCCCTCCTTTTGTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR CCA 90 bp | GCCTGGACCTCTCCCTTGAGTGTGGGCTGCCCGGTGGTGGGCCACAAAAGGAGGCCTCATTGCCCTGAGTaGTGTTGCATCGCGTGCGCT | + |
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Preference number: 4 (lower is better) Translates to: AWTSPLSVGCPVVGHKRRPHCPE*CCIACA Trigger: AGCGCACGCGATGCAACACCACTCAGGGCAATGAGG...CCTCCTTTTGTGGCCCACCACCGGGCAGCCCACACTCAAGGGAGAGGTCCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR TCA 90 bp | GCCTGGACCTCTCCCTTGAGTGTGGGCTGCCCGGTGGTGGGCCACAAAAGGAGGGCGCTGTCAGGGACCTaGGCGTTGGTGTTATATGTC | + |
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Preference number: 4 (lower is better) Translates to: AWTSPLSVGCPVVGHKRRALSGT*ALVLYV Trigger: GACATATAACACCAACGCTCAGGTCCCTGACAGCGC...CCTCCTTTTGTGGCCCACCACCGGGCAGCCCACACTCAAGGGAGAGGTCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR GCA 90 bp | CTGCTGGAAGTTGCCTGGACCTCTCCCTTGAGTGTGGGCTGCCCGGTGGTGGGCGATATGCGATGTCCTTaGAGCCCTGGCTCAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LLEVAWTSPLSVGCPVVGDMRCP*SPGSEP Trigger: AGGCTCTGAGCCAGGGCTGCAAGGACATCGCATATC...GCCCACCACCGGGCAGCCCACACTCAAGGGAGAGGTCCAGGCAACTTCCAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR GCA 90 bp | CTGCTGGAAGTTGCCTGGACCTCTCCCTTGAGTGTGGGCTGCCCGGTGGTGGGCCAAGGTTGGCCCCAATaGAGGAGGCATACGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLEVAWTSPLSVGCPVVGQGWPQ*RRHTPS Trigger: TGATGGCGTATGCCTCCTGCATTGGGGCCAACCTTG...GCCCACCACCGGGCAGCCCACACTCAAGGGAGAGGTCCAGGCAACTTCCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR TCA 90 bp | GCCTGGACCTCTCCCTTGAGTGTGGGCTGCCCGGTGGTGGGCCACAAAAGGAGGTTGGCCTTACCCTCATaGTGTCCGTGGTCAATCCTG | + |
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Preference number: 4 (lower is better) Translates to: AWTSPLSVGCPVVGHKRRLALPS*CPWSIL Trigger: CAGGATTGACCACGGACATCATGAGGGTAAGGCCAA...CCTCCTTTTGTGGCCCACCACCGGGCAGCCCACACTCAAGGGAGAGGTCCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR TCA 90 bp | CTGCCCGGTGGTGGGCCACAAAAGGAGGGGAGCTGGCTGTCCATTGCGGGCTTGCATATAGGATGGCCGTaGAGGGCTTCTTGTCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: LPGGGPQKEGSWLSIAGLHIGWP*RASCPC Trigger: ACACGGACAAGAAGCCCTTCACGGCCATCCTATATG...CAAGCCCGCAATGGACAGCCAGCTCCCCTCCTTTTGTGGCCCACCACCGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR GCA 90 bp | TGCCCGGTGGTGGGCCACAAAAGGAGGGGAGCTGGCTGTCCATTGCGGGCTTGTGTCCGTGGTCAATCCTaGCTCCTTCCACCAGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: CPVVGHKRRGAGCPLRACVRGQS*LLPPAR Trigger: TCTTGCTGGTGGAAGGAGGCAGGATTGACCACGGAC...ACAAGCCCGCAATGGACAGCCAGCTCCCCTCCTTTTGTGGCCCACCACCGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR CCA 90 bp | CTGTTCCTGCTGGAAGTTGCCTGGACCTCTCCCTTGAGTGTGGGCTGCCCGGTGACTTCCCAGCATCCTTaGCCCAGCGCAGGATGGATG | + |
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Preference number: 4 (lower is better) Translates to: LFLLEVAWTSPLSVGCPVTSQHP*PSAGWM Trigger: CATCCATCCTGCGCTGGGCCAAGGATGCTGGGAAGT...CACCGGGCAGCCCACACTCAAGGGAGAGGTCCAGGCAACTTCCAGCAGGAACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR CCA 90 bp | CTGCTGGAAGTTGCCTGGACCTCTCCCTTGAGTGTGGGCTGCCCGGTGGTGGGCCTAGCCTTGTACCCCTaGCCTTCTCATCCAGTTCGT | + |
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Preference number: 4 (lower is better) Translates to: LLEVAWTSPLSVGCPVVGLALYP*PSHPVR Trigger: ACGAACTGGATGAGAAGGCCAGGGGTACAAGGCTAG...GCCCACCACCGGGCAGCCCACACTCAAGGGAGAGGTCCAGGCAACTTCCAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR CCA 90 bp | TGCCCGGTGGTGGGCCACAAAAGGAGGGGAGCTGGCTGTCCATTGCGGGCTTGTGTCAAGGTGTCTTTCTaGGATGTCATGGCGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: CPVVGHKRRGAGCPLRACVKVSF*DVMAPA Trigger: GGCAGGCGCCATGACATCCCAGAAAGACACCTTGAC...ACAAGCCCGCAATGGACAGCCAGCTCCCCTCCTTTTGTGGCCCACCACCGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| 3UTR CAA 72 bp | CTTCTGTTCCTGCTGGAAGTTGCCTGGACCTCTCCCTaGAGTGTGGGCTGCCCGGTGGTGGGCCACAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: LLFLLEVAWTSP*SVGCPVVGHKR Trigger: CCTTTTGTGGCCCACCACCGGGCAGCCCACACTCAAGGGAGAGGTCCAGGCAACTTCCAGCAGGAACAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR GCA 90 bp | CTGCTGGAAGTTGCCTGGACCTCTCCCTTGAGTGTGGGCTGCCCGGTGGTGGGCATCTCCACTGCTTCATaGAGAGCCTGCTTGGCCTTA | + |
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Preference number: 4 (lower is better) Translates to: LLEVAWTSPLSVGCPVVGISTAS*RACLAL Trigger: TAAGGCCAAGCAGGCTCTGCATGAAGCAGTGGAGAT...GCCCACCACCGGGCAGCCCACACTCAAGGGAGAGGTCCAGGCAACTTCCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR TCA 90 bp | GTGTGGGCTGCCCGGTGGTGGGCCACAAAAGGAGGGGAGCTGGCTGTCCATTGCTGGCTACATTGGTGTTaGGCTTTTGGAGTTTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VWAARWWATKGGELAVHCWLHWC*AFGVSG Trigger: CCCTGAAACTCCAAAAGCTCAACACCAATGTAGCCA...GCAATGGACAGCCAGCTCCCCTCCTTTTGTGGCCCACCACCGGGCAGCCCACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR CCA 90 bp | GTGTGGGCTGCCCGGTGGTGGGCCACAAAAGGAGGGGAGCTGGCTGTCCATTGCTGGTGTTATATGTCTTaGAGAGGGCCACAAAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: VWAARWWATKGGELAVHCWCYMS*RGPQRG Trigger: TCCCCTTTGTGGCCCTCTCCAAGACATATAACACCA...GCAATGGACAGCCAGCTCCCCTCCTTTTGTGGCCCACCACCGGGCAGCCCACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR TCA 90 bp | GCCTGGACCTCTCCCTTGAGTGTGGGCTGCCCGGTGGTGGGCCACAAAAGGAGGTGTATCCACCGAATGTaGAAACGTGGGAATGATCAG | + |
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Preference number: 4 (lower is better) Translates to: AWTSPLSVGCPVVGHKRRCIHRM*KRGNDQ Trigger: CTGATCATTCCCACGTTTTCACATTCGGTGGATACA...CCTCCTTTTGTGGCCCACCACCGGGCAGCCCACACTCAAGGGAGAGGTCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR GCA 90 bp | CTGGCCCATGGAGGATTCCAGATACAGGCAAGGCAGATAGCGAACTTCTGTTCCTGGTGTTGCATCGCGTaGGCTCTGTGGCTGCGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LAHGGFQIQARQIANFCSWCCIA*ALWLRS Trigger: TGAGCGCAGCCACAGAGCGCACGCGATGCAACACCA...GGAACAGAAGTTCGCTATCTGCCTTGCCTGTATCTGGAATCCTCCATGGGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR CCA 90 bp | AGGCAGAGCCAGGAATCTGGCCCATGGAGGATTCCAGATACAGGCAAGGCAGATCCGTGTCGCTCACCATaGGAGCCAGACCAAAGATGG | + |
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Preference number: 4 (lower is better) Translates to: RQSQESGPWRIPDTGKADPCRSP*EPDQRW Trigger: CCATCTTTGGTCTGGCTCCCATGGTGAGCGACACGG...ATCTGCCTTGCCTGTATCTGGAATCCTCCATGGGCCAGATTCCTGGCTCTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR TCA 90 bp | CAGATACAGGCAAGGCAGATAGCGAACTTCTGTTCCTGCTGGAAGTTGCCTGGAAGCGCAGGATGGATGTaGCCTCATTGCCCTGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: QIQARQIANFCSCWKLPGSAGWM*PHCPEW Trigger: CCACTCAGGGCAATGAGGTCACATCCATCCTGCGCT...TCCAGGCAACTTCCAGCAGGAACAGAAGTTCGCTATCTGCCTTGCCTGTATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR CCA 90 bp | AGGCAGAGCCAGGAATCTGGCCCATGGAGGATTCCAGATACAGGCAAGGCAGATGCTGTCGCCAGTAACTaGGGTCTCTCTCTTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RQSQESGPWRIPDTGKADAVASN*GLSLSL Trigger: CAGAGAAAGAGAGAGACCCCAGTTACTGGCGACAGC...ATCTGCCTTGCCTGTATCTGGAATCCTCCATGGGCCAGATTCCTGGCTCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR CCA 90 bp | CTGGCCCATGGAGGATTCCAGATACAGGCAAGGCAGATAGCGAACTTCTGTTCCGCCTTGCCAATGGCCTaGTCCATCTCCACTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LAHGGFQIQARQIANFCSALPMA*SISTAS Trigger: TGAAGCAGTGGAGATGGACCAGGCCATTGGCAAGGC...GGAACAGAAGTTCGCTATCTGCCTTGCCTGTATCTGGAATCCTCCATGGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR CCA 90 bp | TCTGGCCCATGGAGGATTCCAGATACAGGCAAGGCAGATAGCGAACTTCTGTTCCTGGCTCAGAGCCTCTaGTGGCATCTCGTTATCCGA | + |
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Preference number: 4 (lower is better) Translates to: SGPWRIPDTGKADSELLFLAQSL*WHLVIR Trigger: TCGGATAACGAGATGCCACCAGAGGCTCTGAGCCAG...GAACAGAAGTTCGCTATCTGCCTTGCCTGTATCTGGAATCCTCCATGGGCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR GCA 90 bp | AGGCAGAGCCAGGAATCTGGCCCATGGAGGATTCCAGATACAGGCAAGGCAGATCGATTCAATTCATACTaGATGTCCCCGGGCTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: RQSQESGPWRIPDTGKADRFNSY*MSPGSK Trigger: CTTTGAGCCCGGGGACATGCAGTATGAATTGAATCG...ATCTGCCTTGCCTGTATCTGGAATCCTCCATGGGCCAGATTCCTGGCTCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR TCA 90 bp | TCTGGCCCATGGAGGATTCCAGATACAGGCAAGGCAGATAGCGAACTTCTGTTCGCAAGAAGAAGCCTTTaGGGTTTTTGGTCAGGATCC | + |
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Preference number: 4 (lower is better) Translates to: SGPWRIPDTGKADSELLFARRSL*GFWSGS Trigger: GGATCCTGACCAAAAACCTCAAAGGCTTCTTCTTGC...GAACAGAAGTTCGCTATCTGCCTTGCCTGTATCTGGAATCCTCCATGGGCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR CCA 90 bp | CTGGCCCATGGAGGATTCCAGATACAGGCAAGGCAGATAGCGAACTTCTGTTCCGTCTCTCTCTTTCTCTaGCACAAAAGAGTTGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: LAHGGFQIQARQIANFCSVSLFL*HKRVGK Trigger: CTTACCAACTCTTTTGTGCCAGAGAAAGAGAGAGAC...GGAACAGAAGTTCGCTATCTGCCTTGCCTGTATCTGGAATCCTCCATGGGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR TCA 90 bp | TCTGGCCCATGGAGGATTCCAGATACAGGCAAGGCAGATAGCGAACTTCTGTTCATATTGTGCATTAGCTaGTATGCGATGTCCTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SGPWRIPDTGKADSELLFILCIS*YAMSLQ Trigger: CTGCAAGGACATCGCATATCAGCTAATGCACAATAT...GAACAGAAGTTCGCTATCTGCCTTGCCTGTATCTGGAATCCTCCATGGGCCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS CCA 90 bp | ATCGCGTGCGCTCTGTGGCTGCGCTCACTCCCACTGTGCCCTCGTTaGCCTTCACGCCACACAAGTAGGCAGTGGCAGTGCCCGCGCTGT | + |
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Preference number: 5 (lower is better) Translates to: IACALWLRSLPLCPR*PSRHTSRQWQCPRC Trigger: ACAGCGCGGGCACTGCCACTGCCTACTTGTGTGGCGTGAAGGCCAACGAGGGCACAGTGGGAGTGAGCGCAGCCACAGAGCGCACGCGAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030551.11 ENSMUST00000139951.8 ENSMUST00000153588.8 |
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| CDS-3UTR CAA 90 bp | GCCTGGACCTCTCCCTTGAGTGTGGGCTGCCCGGTGGTGGGCCACAAAAGGAGGCCCACTGTGCCCTCGTaGGCCTTCACGCCACACAAG | + |
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Preference number: 5 (lower is better) Translates to: AWTSPLSVGCPVVGHKRRPTVPS*AFTPHK Trigger: CTTGTGTGGCGTGAAGGCCAACGAGGGCACAGTGGG...CCTCCTTTTGTGGCCCACCACCGGGCAGCCCACACTCAAGGGAGAGGTCCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS-3UTR CAA 90 bp | GCCTGGACCTCTCCCTTGAGTGTGGGCTGCCCGGTGGTGGGCCACAAAAGGAGGGACTTCCCAGCATCCTaGGCCCAGCGCAGGATGGAT | + |
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Preference number: 5 (lower is better) Translates to: AWTSPLSVGCPVVGHKRRDFPAS*AQRRMD Trigger: ATCCATCCTGCGCTGGGCCAAGGATGCTGGGAAGTC...CCTCCTTTTGTGGCCCACCACCGGGCAGCCCACACTCAAGGGAGAGGTCCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS TCA 90 bp | CCAGCATCCTTGGCCCAGCGCAGGATGGATGTGACCTCATTGCCCTaGGTGGTGTTGCATCGCGTGCGCTCTGTGGCTGCGCTCACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PASLAQRRMDVTSLP*VVLHRVRSVAALTP Trigger: GGGAGTGAGCGCAGCCACAGAGCGCACGCGATGCAACACCACTCAGGGCAATGAGGTCACATCCATCCTGCGCTGGGCCAAGGATGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030551.11 ENSMUST00000139951.8 ENSMUST00000153588.8 |
||
| CDS GCA 90 bp | TGGTGTTGCATCGCGTGCGCTCTGTGGCTGCGCTCACTCCCACTGTaGCCTCGTTGGCCTTCACGCCACACAAGTAGGCAGTGGCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WCCIACALWLRSLPL*PRWPSRHTSRQWQC Trigger: GCACTGCCACTGCCTACTTGTGTGGCGTGAAGGCCAACGAGGGCACAGTGGGAGTGAGCGCAGCCACAGAGCGCACGCGATGCAACACCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030551.11 ENSMUST00000139951.8 ENSMUST00000153588.8 |
||
| CDS CCA 90 bp | GGGAGGGTGCGCTCCCAGAGCCGGCCCAGGCACAGTGGTCAAGGTTaGCCCCAATGCAGGAGGCATACGCCATCACATGGGGAATGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: GRVRSQSRPRHSGQG*PQCRRHTPSHGECS Trigger: ACTACATTCCCCATGTGATGGCGTATGCCTCCTGCATTGGGGCCAACCTTGACCACTGTGCCTGGGCCGGCTCTGGGAGCGCACCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS-3UTR CAA 90 bp | TGTGGGCTGCCCGGTGGTGGGCCACAAAAGGAGGGGAGCTGGCTGTCCATTGCGCAAGGTCTCTTGGGCTaGCTGTCGCCAGTAACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CGLPGGGPQKEGSWLSIAQGLLG*LSPVTG Trigger: CCCAGTTACTGGCGACAGCAAGCCCAAGAGACCTTG...CGCAATGGACAGCCAGCTCCCCTCCTTTTGTGGCCCACCACCGGGCAGCCCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS TCA 90 bp | TGCCCACGGACTTCCCAGCATCCTTGGCCCAGCGCAGGATGGATGTaGCCTCATTGCCCTGAGTGGTGTTGCATCGCGTGCGCTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CPRTSQHPWPSAGWM*PHCPEWCCIACALW Trigger: CCACAGAGCGCACGCGATGCAACACCACTCAGGGCAATGAGGTCACATCCATCCTGCGCTGGGCCAAGGATGCTGGGAAGTCCGTGGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030551.11 ENSMUST00000139951.8 |
||
| CDS-3UTR CAA 90 bp | GGCCACAAAAGGAGGGGAGCTGGCTGTCCATTGCGGGCTTGTGGGACCTGCACCGCCACAAAGGGGAATTaGTCCATCTCCAGCCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GHKRRGAGCPLRACGTCTATKGN*SISSRV Trigger: GACCCGGCTGGAGATGGACAAATTCCCCTTTGTGGC...GGTGCAGGTCCCACAAGCCCGCAATGGACAGCCAGCTCCCCTCCTTTTGTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS GCA 90 bp | TGGTGGCATCTCGTTATCCGAGTACCAGTCCCGATCGGCCGAGTGTaGGTAGGCTGCACTGGGTGTGGCGTGGTTCACCCGAGTGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: WWHLVIRVPVPIGRV*VGCTGCGVVHPSGS Trigger: ACTACCACTCGGGTGAACCACGCCACACCCAGTGCAGCCTACGCACACTCGGCCGATCGGGACTGGTACTCGGATAACGAGATGCCACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030551.11 ENSMUST00000139951.8 |
||
| CDS GCA 90 bp | CTGTGCCCTCGTTGGCCTTCACGCCACACAAGTAGGCAGTGGCAGTaGCCGCGCTGTCAGGGACCTGAGCGTTGGTGTTATATGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LCPRWPSRHTSRQWQ*PRCQGPERWCYMSW Trigger: CCAAGACATATAACACCAACGCTCAGGTCCCTGACAGCGCGGGCACTGCCACTGCCTACTTGTGTGGCGTGAAGGCCAACGAGGGCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030551.11 ENSMUST00000139951.8 ENSMUST00000153588.8 |
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| CDS GCA 90 bp | CGCTCCCAGAGCCGGCCCAGGCACAGTGGTCAAGGTTGGCCCCAATaGAGGAGGCATACGCCATCACATGGGGAATGTAGTTCTGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RSQSRPRHSGQGWPQ*RRHTPSHGECSSAH Trigger: ATGAGCAGAACTACATTCCCCATGTGATGGCGTATGCCTCCTGCATTGGGGCCAACCTTGACCACTGTGCCTGGGCCGGCTCTGGGAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS-3UTR CAA 90 bp | ACCTCTCCCTTGAGTGTGGGCTGCCCGGTGGTGGGCCACAAAAGGAGGGGAGCTTCTGGCACAAAAGAGTaGGTAAGGCAGGTGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: TSPLSVGCPVVGHKRRGASGTKE*VRQVPM Trigger: CATCGGCACCTGCCTTACCAACTCTTTTGTGCCAGA...AGCTCCCCTCCTTTTGTGGCCCACCACCGGGCAGCCCACACTCAAGGGAGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS TCA 90 bp | CGTCCACCACCTTGTAGCCAGGCCCGTTACCATATAGGATGGCCGTaGAGGGCTTCTTGTCCGTGTCGCTCACCATGGGAGCCAGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: RPPPCSQARYHIGWP*RASCPCRSPWEPDQ Trigger: TTGGTCTGGCTCCCATGGTGAGCGACACGGACAAGAAGCCCTTCACGGCCATCCTATATGGTAACGGGCCTGGCTACAAGGTGGTGGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS GCA 90 bp | GGATGTCATGGCGCCTGCCTTGCCAATGGCCTGGTCCATCTCCACTaGTTCATGCAGAGCCTGCTTGGCCTTACCCTCATGATGTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GCHGACLANGLVHLH*FMQSLLGLTLMMSV Trigger: CACGGACATCATGAGGGTAAGGCCAAGCAGGCTCTGCATGAAGCAGTGGAGATGGACCAGGCCATTGGCAAGGCAGGCGCCATGACATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS CCA 90 bp | AAGGGGAATTTGTCCATCTCCAGCCGGGTCTCCTCGCCCGTGTTGTaGTGTAGCTGGCCCTTAAGGATTCGGGCAGCGGTTACTGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KGNLSISSRVSSPVL*CSWPLRIRAAVTVE Trigger: CTCCACAGTAACCGCTGCCCGAATCCTTAAGGGCCAGCTACACCACAACACGGGCGAGGAGACCCGGCTGGAGATGGACAAATTCCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030551.11 ENSMUST00000133473.2 ENSMUST00000139951.8 ENSMUST00000153588.8 |
||
| CDS-3UTR CAA 90 bp | ACCTCTCCCTTGAGTGTGGGCTGCCCGGTGGTGGGCCACAAAAGGAGGGGAGCTTTGGTGTTATATGTCTaGGAGAGGGCCACAAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TSPLSVGCPVVGHKRRGALVLYV*ERATKG Trigger: CCCCTTTGTGGCCCTCTCCAAGACATATAACACCAA...AGCTCCCCTCCTTTTGTGGCCCACCACCGGGCAGCCCACACTCAAGGGAGAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS TCA 90 bp | GTCCGTGGTCAATCCTGCCTCCTTCCACCAGCAAGAAGAAGCCTTTaGGGTTTTTGGTCAGGATCCGGAGGGCCACCTCCACCATCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VRGQSCLLPPARRSL*GFWSGSGGPPPPSR Trigger: CCGAGATGGTGGAGGTGGCCCTCCGGATCCTGACCAAAAACCTCAAAGGCTTCTTCTTGCTGGTGGAAGGAGGCAGGATTGACCACGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS CCA 90 bp | AAGGTGTCTTTCTGGGATGTCATGGCGCCTGCCTTGCCAATGGCCTaGTCCATCTCCACTGCTTCATGCAGAGCCTGCTTGGCCTTACCC | + |
|
Preference number: 5 (lower is better) Translates to: KVSFWDVMAPALPMA*SISTASCRACLALP Trigger: GGGTAAGGCCAAGCAGGCTCTGCATGAAGCAGTGGAGATGGACCAGGCCATTGGCAAGGCAGGCGCCATGACATCCCAGAAAGACACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS CCA 90 bp | CAGTCAAGGTGTCTTTCTGGGATGTCATGGCGCCTGCCTTGCCAATaGCCTGGTCCATCTCCACTGCTTCATGCAGAGCCTGCTTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QSRCLSGMSWRLPCQ*PGPSPLLHAEPAWP Trigger: AGGCCAAGCAGGCTCTGCATGAAGCAGTGGAGATGGACCAGGCCATTGGCAAGGCAGGCGCCATGACATCCCAGAAAGACACCTTGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS GCA 90 bp | AGCAGTAACCACAGTCAAGGTGTCTTTCTGGGATGTCATGGCGCCTaGCTTGCCAATGGCCTGGTCCATCTCCACTGCTTCATGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSNHSQGVFLGCHGA*LANGLVHLHCFMQS Trigger: GCTCTGCATGAAGCAGTGGAGATGGACCAGGCCATTGGCAAGGCAGGCGCCATGACATCCCAGAAAGACACCTTGACTGTGGTTACTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS-3UTR CAA 90 bp | TGCCCGGTGGTGGGCCACAAAAGGAGGGGAGCTGGCTGTCCATTGCGGGCTTGTACATTCTTGGCTACATaGGTGTTGAGCTTTTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: CPVVGHKRRGAGCPLRACTFLAT*VLSFWS Trigger: ACTCCAAAAGCTCAACACCAATGTAGCCAAGAATGT...ACAAGCCCGCAATGGACAGCCAGCTCCCCTCCTTTTGTGGCCCACCACCGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS-3UTR CAA 90 bp | CAGATACAGGCAAGGCAGATAGCGAACTTCTGTTCCTGCTGGAAGTTGCCTGGAGCCGTGAAGGGCTTCTaGTCCGTGTCGCTCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: QIQARQIANFCSCWKLPGAVKGF*SVSLTM Trigger: CATGGTGAGCGACACGGACAAGAAGCCCTTCACGGC...TCCAGGCAACTTCCAGCAGGAACAGAAGTTCGCTATCTGCCTTGCCTGTATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS TCA 90 bp | CCGCCACCCATGATCACGTCGATATCCTTGATATTGTGCATTAGCTaGTATGCGATGTCCTTGCAGCCCTGGCTCAGAGCCTCTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPPMITSISLILCIS*YAMSLQPWLRASGG Trigger: GCCACCAGAGGCTCTGAGCCAGGGCTGCAAGGACATCGCATATCAGCTAATGCACAATATCAAGGATATCGACGTGATCATGGGTGGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS TCA 90 bp | TCCATCTCCACTGCTTCATGCAGAGCCTGCTTGGCCTTACCCTCATaGTGTCCGTGGTCAATCCTGCCTCCTTCCACCAGCAAGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SISTASCRACLALPS*CPWSILPPSTSKKK Trigger: CTTCTTCTTGCTGGTGGAAGGAGGCAGGATTGACCACGGACATCATGAGGGTAAGGCCAAGCAGGCTCTGCATGAAGCAGTGGAGATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS-3UTR CAA 90 bp | TGCCCGGTGGTGGGCCACAAAAGGAGGGGAGCTGGCTGTCCATTGCGGGCTTGTATTGGTGTTGAGCTTTaGGAGTTTCAGGGCATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CPVVGHKRRGAGCPLRACIGVEL*EFQGIF Trigger: AAAAATGCCCTGAAACTCCAAAAGCTCAACACCAAT...ACAAGCCCGCAATGGACAGCCAGCTCCCCTCCTTTTGTGGCCCACCACCGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS-3UTR CAA 90 bp | AGGCAGAGCCAGGAATCTGGCCCATGGAGGATTCCAGATACAGGCAAGGCAGATAACATGATGACATTCTaGGCTACATTGGTGTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RQSQESGPWRIPDTGKADNMMTF*ATLVLS Trigger: GCTCAACACCAATGTAGCCAAGAATGTCATCATGTT...ATCTGCCTTGCCTGTATCTGGAATCCTCCATGGGCCAGATTCCTGGCTCTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS CCA 72 bp | GGGGAGGGTGCGCTCCCAGAGCCGGCCCAGGCACAGTaGTCAAGGTTGGCCCCAATGCAGGAGGCATACGCC | + |
|
Preference number: 6 (lower is better) Translates to: GEGALPEPAQAQ*SRLAPMQEAYA Trigger: GGCGTATGCCTCCTGCATTGGGGCCAACCTTGACCACTGTGCCTGGGCCGGCTCTGGGAGCGCACCCTCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS CCA 72 bp | CGCTCCCAGAGCCGGCCCAGGCACAGTGGTCAAGGTTaGCCCCAATGCAGGAGGCATACGCCATCACATGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSQSRPRHSGQG*PQCRRHTPSHG Trigger: CCCATGTGATGGCGTATGCCTCCTGCATTGGGGCCAACCTTGACCACTGTGCCTGGGCCGGCTCTGGGAGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS CAA 72 bp | GCGCTCCCAGAGCCGGCCCAGGCACAGTGGTCAAGGTaGGCCCCAATGCAGGAGGCATACGCCATCACATGG | + |
|
Preference number: 6 (lower is better) Translates to: ALPEPAQAQWSR*APMQEAYAITW Trigger: CCATGTGATGGCGTATGCCTCCTGCATTGGGGCCAACCTTGACCACTGTGCCTGGGCCGGCTCTGGGAGCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS GCA 72 bp | ATCGCGTGCGCTCTGTGGCTGCGCTCACTCCCACTGTaGCCTCGTTGGCCTTCACGCCACACAAGTAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: IACALWLRSLPL*PRWPSRHTSRQ Trigger: CTGCCTACTTGTGTGGCGTGAAGGCCAACGAGGGCACAGTGGGAGTGAGCGCAGCCACAGAGCGCACGCGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030551.11 ENSMUST00000139951.8 ENSMUST00000153588.8 |
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| CDS GCA 72 bp | CGAGTACCAGTCCCGATCGGCCGAGTGTGCGTAGGCTaGACTGGGTGTGGCGTGGTTCACCCGAGTGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: RVPVPIGRVCVG*TGCGVVHPSGS Trigger: ACTACCACTCGGGTGAACCACGCCACACCCAGTGCAGCCTACGCACACTCGGCCGATCGGGACTGGTACTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030551.11 ENSMUST00000139951.8 |
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| CDS GCA 72 bp | CTCGTTATCCGAGTACCAGTCCCGATCGGCCGAGTGTaGGTAGGCTGCACTGGGTGTGGCGTGGTTCACCCG | + |
|
Preference number: 6 (lower is better) Translates to: LVIRVPVPIGRV*VGCTGCGVVHP Trigger: CGGGTGAACCACGCCACACCCAGTGCAGCCTACGCACACTCGGCCGATCGGGACTGGTACTCGGATAACGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030551.11 ENSMUST00000139951.8 |
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| CDS CCA 72 bp | GCTCTGTGGCTGCGCTCACTCCCACTGTGCCCTCGTTaGCCTTCACGCCACACAAGTAGGCAGTGGCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ALWLRSLPLCPR*PSRHTSRQWQC Trigger: GCACTGCCACTGCCTACTTGTGTGGCGTGAAGGCCAACGAGGGCACAGTGGGAGTGAGCGCAGCCACAGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030551.11 ENSMUST00000139951.8 ENSMUST00000153588.8 |
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| CDS TCA 72 bp | TTGGCCCAGCGCAGGATGGATGTGACCTCATTGCCCTaGGTGGTGTTGCATCGCGTGCGCTCTGTGGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LAQRRMDVTSLP*VVLHRVRSVAA Trigger: CGCAGCCACAGAGCGCACGCGATGCAACACCACTCAGGGCAATGAGGTCACATCCATCCTGCGCTGGGCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030551.11 ENSMUST00000139951.8 ENSMUST00000153588.8 |
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| CDS CCA 72 bp | CCCCGGGCTCAAAGAGACCTAAGAGGTAGTCCACCCTaGAGGGGTCAAGGGCCAGCAGTTCAGTGCGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PRAQRDLRGSPP*RGQGPAVQCGS Trigger: GGAACCGCACTGAACTGCTGGCCCTTGACCCCTCCAGGGTGGACTACCTCTTAGGTCTCTTTGAGCCCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS CCA 72 bp | TTGTCCATCTCCAGCCGGGTCTCCTCGCCCGTGTTGTaGTGTAGCTGGCCCTTAAGGATTCGGGCAGCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LSISSRVSSPVL*CSWPLRIRAAV Trigger: AACCGCTGCCCGAATCCTTAAGGGCCAGCTACACCACAACACGGGCGAGGAGACCCGGCTGGAGATGGACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030551.11 ENSMUST00000133473.2 ENSMUST00000139951.8 ENSMUST00000153588.8 |
||
| CDS CCA 72 bp | TGCGATGTCCTTGCAGCCCTGGCTCAGAGCCTCTGGTaGCATCTCGTTATCCGAGTACCAGTCCCGATCGGC | + |
|
Preference number: 6 (lower is better) Translates to: CDVLAALAQSLW*HLVIRVPVPIG Trigger: GCCGATCGGGACTGGTACTCGGATAACGAGATGCCACCAGAGGCTCTGAGCCAGGGCTGCAAGGACATCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030551.11 ENSMUST00000139951.8 |
||
| CDS GCA 72 bp | AGCCGGCCCAGGCACAGTGGTCAAGGTTGGCCCCAATaGAGGAGGCATACGCCATCACATGGGGAATGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: SRPRHSGQGWPQ*RRHTPSHGECS Trigger: ACTACATTCCCCATGTGATGGCGTATGCCTCCTGCATTGGGGCCAACCTTGACCACTGTGCCTGGGCCGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS CCA 72 bp | CAGTGGCAGTGCCCGCGCTGTCAGGGACCTGAGCGTTaGTGTTATATGTCTTGGAGAGGGCCACAAAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: QWQCPRCQGPER*CYMSWRGPQRG Trigger: TCCCCTTTGTGGCCCTCTCCAAGACATATAACACCAACGCTCAGGTCCCTGACAGCGCGGGCACTGCCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030551.11 ENSMUST00000139951.8 ENSMUST00000153588.8 |
||
| CDS CAA 72 bp | AATTTGTCCATCTCCAGCCGGGTCTCCTCGCCCGTGTaGTGGTGTAGCTGGCCCTTAAGGATTCGGGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: NLSISSRVSSPV*WCSWPLRIRAA Trigger: CGCTGCCCGAATCCTTAAGGGCCAGCTACACCACAACACGGGCGAGGAGACCCGGCTGGAGATGGACAAATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030551.11 ENSMUST00000133473.2 ENSMUST00000139951.8 ENSMUST00000153588.8 |
||
| CDS CAA 90 bp | ACAAAGGGGAATTTGTCCATCTCCAGCCGGGTCTCCTCGCCCGTGTaGTGGTGTAGCTGGCCCTTAAGGATTCGGGCAGCGGTTACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TKGNLSISSRVSSPV*WCSWPLRIRAAVTV Trigger: CACAGTAACCGCTGCCCGAATCCTTAAGGGCCAGCTACACCACAACACGGGCGAGGAGACCCGGCTGGAGATGGACAAATTCCCCTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030551.11 ENSMUST00000133473.2 ENSMUST00000139951.8 ENSMUST00000153588.8 |
||
| CDS TCA 72 bp | CCTTGTAGCCAGGCCCGTTACCATATAGGATGGCCGTaGAGGGCTTCTTGTCCGTGTCGCTCACCATGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PCSQARYHIGWP*RASCPCRSPWE Trigger: CTCCCATGGTGAGCGACACGGACAAGAAGCCCTTCACGGCCATCCTATATGGTAACGGGCCTGGCTACAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS CCA 72 bp | TTCTGGGATGTCATGGCGCCTGCCTTGCCAATGGCCTaGTCCATCTCCACTGCTTCATGCAGAGCCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FWDVMAPALPMA*SISTASCRACL Trigger: CAAGCAGGCTCTGCATGAAGCAGTGGAGATGGACCAGGCCATTGGCAAGGCAGGCGCCATGACATCCCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS CAA 72 bp | GGCCCGTTACCATATAGGATGGCCGTGAAGGGCTTCTaGTCCGTGTCGCTCACCATGGGAGCCAGACCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GPLPYRMAVKGF*SVSLTMGARPK Trigger: CTTTGGTCTGGCTCCCATGGTGAGCGACACGGACAAGAAGCCCTTCACGGCCATCCTATATGGTAACGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS CAA 90 bp | CGGAGGGCCACCTCCACCATCTCGGAGAGCGAAGGGTCAGTCAGGTaGTTCCGATTCAATTCATACTGCATGTCCCCGGGCTCAAAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RRATSTISESEGSVR*FRFNSYCMSPGSKR Trigger: TCTCTTTGAGCCCGGGGACATGCAGTATGAATTGAATCGGAACAACCTGACTGACCCTTCGCTCTCCGAGATGGTGGAGGTGGCCCTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS CAA 90 bp | TGTCCGTGGTCAATCCTGCCTCCTTCCACCAGCAAGAAGAAGCCTTaGAGGTTTTTGGTCAGGATCCGGAGGGCCACCTCCACCATCTCG | + |
|
Preference number: 6 (lower is better) Translates to: CPWSILPPSTSKKKP*RFLVRIRRATSTIS Trigger: CGAGATGGTGGAGGTGGCCCTCCGGATCCTGACCAAAAACCTCAAAGGCTTCTTCTTGCTGGTGGAAGGAGGCAGGATTGACCACGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS CAA 90 bp | GTAACCACAGTCAAGGTGTCTTTCTGGGATGTCATGGCGCCTGCCTaGCCAATGGCCTGGTCCATCTCCACTGCTTCATGCAGAGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VTTVKVSFWDVMAPA*PMAWSISTASCRAC Trigger: GCAGGCTCTGCATGAAGCAGTGGAGATGGACCAGGCCATTGGCAAGGCAGGCGCCATGACATCCCAGAAAGACACCTTGACTGTGGTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS TCA 72 bp | ACTGCTTCATGCAGAGCCTGCTTGGCCTTACCCTCATaGTGTCCGTGGTCAATCCTGCCTCCTTCCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TASCRACLALPS*CPWSILPPSTS Trigger: GCTGGTGGAAGGAGGCAGGATTGACCACGGACATCATGAGGGTAAGGCCAAGCAGGCTCTGCATGAAGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
||
| CDS GCA 72 bp | CACAGTCAAGGTGTCTTTCTGGGATGTCATGGCGCCTaGCTTGCCAATGGCCTGGTCCATCTCCACTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: HSQGVFLGCHGA*LANGLVHLHCF Trigger: GAAGCAGTGGAGATGGACCAGGCCATTGGCAAGGCAGGCGCCATGACATCCCAGAAAGACACCTTGACTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS CCA 72 bp | TGTCTTTCTGGGATGTCATGGCGCCTGCCTTGCCAATaGCCTGGTCCATCTCCACTGCTTCATGCAGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: CLSGMSWRLPCQ*PGPSPLLHAEP Trigger: AGGCTCTGCATGAAGCAGTGGAGATGGACCAGGCCATTGGCAAGGCAGGCGCCATGACATCCCAGAAAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS CAA 72 bp | GTCAAGGTGTCTTTCTGGGATGTCATGGCGCCTGCCTaGCCAATGGCCTGGTCCATCTCCACTGCTTCATGC | + |
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Preference number: 6 (lower is better) Translates to: VKVSFWDVMAPA*PMAWSISTASC Trigger: GCATGAAGCAGTGGAGATGGACCAGGCCATTGGCAAGGCAGGCGCCATGACATCCCAGAAAGACACCTTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS GCA 72 bp | TCAAGGTGTCTTTCTGGGATGTCATGGCGCCTGCCTTaGCAATGGCCTGGTCCATCTCCACTGCTTCATGCA | + |
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Preference number: 6 (lower is better) Translates to: SRCLSGMSWRLP*QWPGPSPLLHA Trigger: TGCATGAAGCAGTGGAGATGGACCAGGCCATTGGCAAGGCAGGCGCCATGACATCCCAGAAAGACACCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS CAA 72 bp | ACCTCCACCATCTCGGAGAGCGAAGGGTCAGTCAGGTaGTTCCGATTCAATTCATACTGCATGTCCCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: TSTISESEGSVR*FRFNSYCMSPG Trigger: GCCCGGGGACATGCAGTATGAATTGAATCGGAACAACCTGACTGACCCTTCGCTCTCCGAGATGGTGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS CCA 72 bp | ACTGGGCCTGGTAGTTGTTGTGAGCGTAATCTACCATaGAGACATTTTCCCGTTCACCGTCCACCACCTTGT | + |
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Preference number: 6 (lower is better) Translates to: TGPGSCCERNLP*RHFPVHRPPPC Trigger: ACAAGGTGGTGGACGGTGAACGGGAAAATGTCTCCATGGTAGATTACGCTCACAACAACTACCAGGCCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS CAA 72 bp | TTGGAGTTTCAGGGCATTTTTCAAGGTCTCTTGGGCTaGCTGTCGCCAGTAACTGGGGTCTCTCTCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LEFQGIFQGLLG*LSPVTGVSLFL Trigger: GAGAAAGAGAGAGACCCCAGTTACTGGCGACAGCAAGCCCAAGAGACCTTGAAAAATGCCCTGAAACTCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030551.11 ENSMUST00000133473.2 ENSMUST00000139951.8 ENSMUST00000153588.8 |
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| CDS TCA 72 bp | ATGATCACGTCGATATCCTTGATATTGTGCATTAGCTaGTATGCGATGTCCTTGCAGCCCTGGCTCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: MITSISLILCIS*YAMSLQPWLRA Trigger: GGCTCTGAGCCAGGGCTGCAAGGACATCGCATATCAGCTAATGCACAATATCAAGGATATCGACGTGATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030551.11 |
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| CDS CAA 90 bp | TCCCAGGAACATGATGACATTCTTGGCTACATTGGTGTTGAGCTTTaGGAGTTTCAGGGCATTTTTCAAGGTCTCTTGGGCTTGCTGTCG | + |
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Preference number: 6 (lower is better) Translates to: SQEHDDILGYIGVEL*EFQGIFQGLLGLLS Trigger: CGACAGCAAGCCCAAGAGACCTTGAAAAATGCCCTGAAACTCCAAAAGCTCAACACCAATGTAGCCAAGAATGTCATCATGTTCCTGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030551.11 ENSMUST00000133473.2 ENSMUST00000139951.8 ENSMUST00000153588.8 |
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| CDS CAA 90 bp | ACGCCCATACCATCTCCCAGGAACATGATGACATTCTTGGCTACATaGGTGTTGAGCTTTTGGAGTTTCAGGGCATTTTTCAAGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: TPIPSPRNMMTFLAT*VLSFWSFRAFFKVS Trigger: AGAGACCTTGAAAAATGCCCTGAAACTCCAAAAGCTCAACACCAATGTAGCCAAGAATGTCATCATGTTCCTGGGAGATGGTATGGGCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030551.11 ENSMUST00000133473.2 ENSMUST00000139951.8 ENSMUST00000153588.8 |
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| CDS CAA 90 bp | ATACCATCTCCCAGGAACATGATGACATTCTTGGCTACATTGGTGTaGAGCTTTTGGAGTTTCAGGGCATTTTTCAAGGTCTCTTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: IPSPRNMMTFLATLV*SFWSFRAFFKVSWA Trigger: AGCCCAAGAGACCTTGAAAAATGCCCTGAAACTCCAAAAGCTCAACACCAATGTAGCCAAGAATGTCATCATGTTCCTGGGAGATGGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030551.11 ENSMUST00000133473.2 ENSMUST00000139951.8 ENSMUST00000153588.8 |
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| CDS CAA 72 bp | CATGATGACATTCTTGGCTACATTGGTGTTGAGCTTTaGGAGTTTCAGGGCATTTTTCAAGGTCTCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: HDDILGYIGVEL*EFQGIFQGLLG Trigger: GCCCAAGAGACCTTGAAAAATGCCCTGAAACTCCAAAAGCTCAACACCAATGTAGCCAAGAATGTCATCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030551.11 ENSMUST00000133473.2 ENSMUST00000139951.8 ENSMUST00000153588.8 |
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| CDS CAA 72 bp | CCCAGGAACATGATGACATTCTTGGCTACATTGGTGTaGAGCTTTTGGAGTTTCAGGGCATTTTTCAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: PRNMMTFLATLV*SFWSFRAFFKV Trigger: GACCTTGAAAAATGCCCTGAAACTCCAAAAGCTCAACACCAATGTAGCCAAGAATGTCATCATGTTCCTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030551.11 ENSMUST00000133473.2 ENSMUST00000139951.8 ENSMUST00000153588.8 |
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| CDS CAA 72 bp | CCATCTCCCAGGAACATGATGACATTCTTGGCTACATaGGTGTTGAGCTTTTGGAGTTTCAGGGCATTTTTC | + |
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Preference number: 6 (lower is better) Translates to: PSPRNMMTFLAT*VLSFWSFRAFF Trigger: GAAAAATGCCCTGAAACTCCAAAAGCTCAACACCAATGTAGCCAAGAATGTCATCATGTTCCTGGGAGATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030551.11 ENSMUST00000133473.2 ENSMUST00000139951.8 ENSMUST00000153588.8 |
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