RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALPK3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038763

Ensembl transcript IDs: ENSMUST00000107348.2

Found 410 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGTCTAGGCCACCAGGTACTTGGAGGTGGGCCCCACTTGGGGCCTaGGAGCCCTGGGTGATAATGAAAGTTGAAGAGGCCAATAGGTCA +
Preference number: 1 (lower is better)
Translates to: GSRPPGTWRWAPLGA*EPWVIMKVEEANRS
Trigger: TGACCTATTGGCCTCTTCAACTTTCATTATCACCCAGGGCTCCCAGGCCCCAAGTGGGGCCCACCTCCAAGTACCTGGTGGCCTAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR CCA 90 bp CCACCAGGTACTTGGAGGTGGGCCCCACTTGGGGCCTGGGAGCCCTaGGTGATAATGAAAGTTGAAGAGGCCAATAGGTCATGTGCCCAA +
Preference number: 1 (lower is better)
Translates to: PPGTWRWAPLGAWEP*VIMKVEEANRSCAQ
Trigger: TTGGGCACATGACCTATTGGCCTCTTCAACTTTCATTATCACCCAGGGCTCCCAGGCCCCAAGTGGGGCCCACCTCCAAGTACCTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR CCA 90 bp TTGGAGGTAGGCAGAAAGATATCCTTCTCTACACAAGCGTGTGAATaGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCA +
Preference number: 1 (lower is better)
Translates to: LEVGRKISFSTQACE*IETLQEHPVPPLPP
Trigger: TGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCACACGCTTGTGTAGAGAAGGATATCTTTCTGCCTACCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR TCA 90 bp ATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTACACAAGCGTGTaGATGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCC +
Preference number: 1 (lower is better)
Translates to: MVGGRQKDILLYTSV*MDRNPPGTPCASSS
Trigger: GGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCACACGCTTGTGTAGAGAAGGATATCTTTCTGCCTACCTCCAACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR CCA 90 bp TACTCAGAGAGGTCCCAAAGGCATGCCTCCTCTGGGCACCTTCTCTaGTTAGTCCTGAATCGAAAATGTCTCCATCTGGTTCAAGCTGCT +
Preference number: 1 (lower is better)
Translates to: YSERSQRHASSGHLL*LVLNRKCLHLVQAA
Trigger: AGCAGCTTGAACCAGATGGAGACATTTTCGATTCAGGACTAACCAGAGAAGGTGCCCAGAGGAGGCATGCCTTTGGGACCTCTCTGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR GCA 90 bp AAGCCTTCCAATGAGGTGAAACTACTCAGAGAGGTCCCAAAGGCATaGCTCCTCTGGGCACCTTCTCTGGTTAGTCCTGAATCGAAAATG +
Preference number: 1 (lower is better)
Translates to: KPSNEVKLLREVPKA*LLWAPSLVSPESKM
Trigger: CATTTTCGATTCAGGACTAACCAGAGAAGGTGCCCAGAGGAGGCATGCCTTTGGGACCTCTCTGAGTAGTTTCACCTCATTGGAAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR CCA 90 bp CAGAAATTCCCTGGGGACCCACACCTGAGCAGGATCAAGAGCAAATaGTTGGAGGTAGGCAGAAAGATATCCTTCTCTACACAAGCGTGT +
Preference number: 1 (lower is better)
Translates to: QKFPGDPHLSRIKSK*LEVGRKISFSTQAC
Trigger: ACACGCTTGTGTAGAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCCCCAGGGAATTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR CCA 90 bp CACAGGTTCCCGTGCCACCTCCCTCCTCCTGAGCAGAGAACCTGGGAGAGCCAGATTGGGTTCAAAGCCTaGGATGGGGGACGGGCGTGT +
Preference number: 2 (lower is better)
Translates to: HRFPCHLPPPEQRTWESQIGFKA*DGGRAC
Trigger: ACACGCCCGTCCCCCATCCCAGGCTTTGAACCCAAT...CTGGCTCTCCCAGGTTCTCTGCTCAGGAGGAGGGAGGTGGCACGGGAACCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR GCA 90 bp CACAGGTTCCCGTGCCACCTCCCTCCTCCTGAGCAGAGAACCTGGGAGAGCCAGAGAGTGCAGAACTCATaGAGAGGACTCAGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: HRFPCHLPPPEQRTWESQRVQNS*RGLRSP
Trigger: GGGGCTCCTGAGTCCTCTGCATGAGTTCTGCACTCT...CTGGCTCTCCCAGGTTCTCTGCTCAGGAGGAGGGAGGTGGCACGGGAACCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR GCA 90 bp AGGCTGTTCCTTGCCCATACGCTGGTGGGTAGGATGCAGGGTCAGGATAGAAGGGCTTCCTGGTTGGTCTaGTCTCGGGTAGAGGCCCCC +
Preference number: 2 (lower is better)
Translates to: RLFLAHTLVGRMQGQDRRASWLV*SRVEAP
Trigger: GGGGGCCTCTACCCGAGAGCAGACCAACCAGGAAGC...CCTTCTATCCTGACCCTGCATCCTACCCACCAGCGTATGGGCAAGGAACAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR TCA 90 bp CTGGGATGGGGGACGGGCGTGTGTGCAAGGCAGCATGGGAAACAAGTAAGTGCAAGAAGTCTAGTGCCCTaGGGACAGGGAGAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: LGWGTGVCARQHGKQVSARSLVP*GQGESQ
Trigger: CTGGCTCTCTCCCTGTCCTCAGGGCACTAGACTTCT...TGCACTTACTTGTTTCCCATGCTGCCTTGCACACACGCCCGTCCCCCATCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR GCA 90 bp TTCCTTGCCCATACGCTGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTGGGGACGGGCGTGTGTaGAAGGCAGCATGGGAAACA +
Preference number: 2 (lower is better)
Translates to: FLAHTLVGRMQGQDRRSPGDGRV*KAAWET
Trigger: TGTTTCCCATGCTGCCTTGCACACACGCCCGTCCCC...AGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCAGCGTATGGGCAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR GCA 90 bp CTGGGATGGGGGACGGGCGTGTGTGCAAGGCAGCATGGGAAACAAGTAAGTGCAGGGCAAAAAGGTAAATaGTGGCCTGCTGGCCCCAGA +
Preference number: 2 (lower is better)
Translates to: LGWGTGVCARQHGKQVSAGQKGK*WPAGPR
Trigger: TCTGGGGCCAGCAGGCCAGCATTTACCTTTTTGCCC...TGCACTTACTTGTTTCCCATGCTGCCTTGCACACACGCCCGTCCCCCATCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR GCA 90 bp TCAGGAGGGGTATCTAGAAAGGGCCCAGGGTGCTGGACCCCTGCACAGAAATTCTCCAGGAACACCCTGTaGCTCCTCTTCCCCCAAGTG +
Preference number: 2 (lower is better)
Translates to: SGGVSRKGPGCWTPAQKFSRNTL*LLFPQV
Trigger: CACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGA...GAATTTCTGTGCAGGGGTCCAGCACCCTGGGCCCTTTCTAGATACCCCTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR CCA 90 bp GTGAATGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAAGTGTTGCCCATACGCTGGTaGGTAGGATGCAGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: VNGSKPSRNTLCLLFPQVLPIRW*VGCRVR
Trigger: CCTGACCCTGCATCCTACCCACCAGCGTATGGGCAA...CACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR GCA 90 bp TGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAAGTGAGTCCCTGCTGGCCCCAGAGTaGAACACTTACTTGTGTGGT +
Preference number: 2 (lower is better)
Translates to: WIETLQEHPVPPLPPSESLLAPE*NTYLCG
Trigger: ACCACACAAGTAAGTGTTGCACTCTGGGGCCAGCAG...GGACTCACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR CCA 90 bp CCAGGGTGCTGGACCCCTGCACAGAAATTCCCTGGGGACCCACACCTGAGCAGGGAAAATGTCTCCATCTaGTTCAAGCTGCTTCCTGGT +
Preference number: 2 (lower is better)
Translates to: PGCWTPAQKFPGDPHLSRENVSI*FKLLPG
Trigger: ACCAGGAAGCAGCTTGAACCAGATGGAGACATTTTC...CCTGCTCAGGTGTGGGTCCCCAGGGAATTTCTGTGCAGGGGTCCAGCACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR CCA 90 bp CTGGGATGGGGGACGGGCGTGTGTGCAAGGCAGCATGGGAAACAAGTAAGTGCAAAGGCATGCCTCCTCTaGGCACCTTCTCTGGTTAGT +
Preference number: 2 (lower is better)
Translates to: LGWGTGVCARQHGKQVSAKACLL*APSLVS
Trigger: ACTAACCAGAGAAGGTGCCCAGAGGAGGCATGCCTT...TGCACTTACTTGTTTCCCATGCTGCCTTGCACACACGCCCGTCCCCCATCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR CCA 90 bp CTGGGATGGGGGACGGGCGTGTGTGCAAGGCAGCATGGGAAACAAGTAAGTGCACAAAAAGGTAAATGCTaGCCTGCTGGCCCCAGAGTG +
Preference number: 2 (lower is better)
Translates to: LGWGTGVCARQHGKQVSAQKGKC*PAGPRV
Trigger: CACTCTGGGGCCAGCAGGCCAGCATTTACCTTTTTG...TGCACTTACTTGTTTCCCATGCTGCCTTGCACACACGCCCGTCCCCCATCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR TCA 90 bp AAGGGGTCAGAGTGCAGAACTCATGCAGAGGACTCAGGAGCCCCCAGCAGTGGCAAGTGTAAACTTAGATaGGGGTCTAGGCCACCAGGT +
Preference number: 2 (lower is better)
Translates to: KGSECRTHAEDSGAPSSGKCKLR*GSRPPG
Trigger: ACCTGGTGGCCTAGACCCTCATCTAAGTTTACACTT...GCCACTGCTGGGGGCTCCTGAGTCCTCTGCATGAGTTCTGCACTCTGACCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR GCA 90 bp GTGAATGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAAGTGCCATCTGGTTCAAGCTaGTTCCTGGTTGGTCTGCTC +
Preference number: 2 (lower is better)
Translates to: VNGSKPSRNTLCLLFPQVPSGSS*FLVGLL
Trigger: GAGCAGACCAACCAGGAAGCAGCTTGAACCAGATGG...CACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR GCA 90 bp CCAGGGTGCTGGACCCCTGCACAGAAATTCCCTGGGGACCCACACCTGAGCAGGTGGGAAACAAGTAAGTaGAGAGTGACAAGAACATGG +
Preference number: 2 (lower is better)
Translates to: PGCWTPAQKFPGDPHLSRWETSK*RVTRTW
Trigger: CCATGTTCTTGTCACTCTGCACTTACTTGTTTCCCA...CCTGCTCAGGTGTGGGTCCCCAGGGAATTTCTGTGCAGGGGTCCAGCACCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR CCA 90 bp CCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCGCCCCACTTGGGGCCTaGGAGCCCTGGGTGATAATG +
Preference number: 2 (lower is better)
Translates to: PEQDQEQMVGGRQKDILLAPLGA*EPWVIM
Trigger: CATTATCACCCAGGGCTCCCAGGCCCCAAGTGGGGC...GAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR TCA 90 bp TCAGGAGGGGTATCTAGAAAGGGCCCAGGGTGCTGGACCCCTGCACAGAAATTCCCCAAAGCCTTCCAATaGGGTGAAACTACTCAGAGA +
Preference number: 2 (lower is better)
Translates to: SGGVSRKGPGCWTPAQKFPKAFQ*GETTQR
Trigger: TCTCTGAGTAGTTTCACCTCATTGGAAGGCTTTGGG...GAATTTCTGTGCAGGGGTCCAGCACCCTGGGCCCTTTCTAGATACCCCTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR CCA 90 bp CAGAGTGCAGAACTCATGCAGAGGACTCAGGAGCCCCCAGCAGTGGCAAGTGTATCTGGGCACCTTCTCTaGTTAGTCCTGAATCGAAAA +
Preference number: 2 (lower is better)
Translates to: QSAELMQRTQEPPAVASVSGHLL*LVLNRK
Trigger: TTTTCGATTCAGGACTAACCAGAGAAGGTGCCCAGA...TACACTTGCCACTGCTGGGGGCTCCTGAGTCCTCTGCATGAGTTCTGCACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR CCA 90 bp ATTCCCTGGGGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGGTGTGCAAGGCAGCATaGGAAACAAGTAAGTGCAGA +
Preference number: 2 (lower is better)
Translates to: IPWGPTPEQDQEQMVGGRVCKAA*ETSKCR
Trigger: TCTGCACTTACTTGTTTCCCATGCTGCCTTGCACAC...CCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCCCCAGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR CCA 90 bp CTCCAGACCCTACTCCATTCCAGGTCTCAGGAGGGGTATCTAGAAAGGGCCCAGAGGATCAAGAGCAAATaGTTGGAGGTAGGCAGAAAG +
Preference number: 2 (lower is better)
Translates to: LQTLLHSRSQEGYLERAQRIKSK*LEVGRK
Trigger: CTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCT...CTGGGCCCTTTCTAGATACCCCTCCTGAGACCTGGAATGGAGTAGGGTCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR TCA 90 bp CCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCCACTTACTTGTGTGGTaGTTGGGGCAAGGGGTCAGA +
Preference number: 2 (lower is better)
Translates to: PEQDQEQMVGGRQKDILLHLLVW*LGQGVR
Trigger: TCTGACCCCTTGCCCCAATCACCACACAAGTAAGTG...GAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR CCA 90 bp CCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTACTTGTGTGGTGATTaGGGCAAGGGGTCAGAGTGC +
Preference number: 2 (lower is better)
Translates to: PEQDQEQMVGGRQKDILLYLCGD*GKGSEC
Trigger: GCACTCTGACCCCTTGCCCCAATCACCACACAAGTA...GAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR CCA 90 bp CCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCGGCAGCAGACTGAATTaGGTTCAAAGCCTGGGATGG +
Preference number: 2 (lower is better)
Translates to: PEQDQEQMVGGRQKDILLGSRLN*VQSLGW
Trigger: CCATCCCAGGCTTTGAACCCAATTCAGTCTGCTGCC...GAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR CAA 90 bp AAATTCCCTGGGGACCCACACCTGAGCAGGATCAAGAGCAAATGGTaGGAGGTAGGCAGAAAGATATCCTTCTCTACACAAGCGTGTGAA +
Preference number: 2 (lower is better)
Translates to: KFPGDPHLSRIKSKW*EVGRKISFSTQACE
Trigger: TTCACACGCTTGTGTAGAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCCCCAGGGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR CCA 90 bp ACTGTGATGAATGAGGCAAAGAAGCTGAAAGGAGATGAAACCCTGAGAGGCACAGGGGCCTGGGAGCCCTaGGTGATAATGAAAGTTGAA +
Preference number: 2 (lower is better)
Translates to: TVMNEAKKLKGDETLRGTGAWEP*VIMKVE
Trigger: TTCAACTTTCATTATCACCCAGGGCTCCCAGGCCCC...TGTGCCTCTCAGGGTTTCATCTCCTTTCAGCTTCTTTGCCTCATTCATCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR CAA 90 bp TGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGGGAGGTGGGCCCCACTaGGGGCCTGGGAGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: WWVGCRVRIEGALRQRDKGGGPH*GPGSPG
Trigger: CCCAGGGCTCCCAGGCCCCAAGTGGGGCCCACCTCC...CTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR TCA 72 bp CCTGGGAGAGCCAGGGGAGAGGGCACTAGGGTAGAGTaGAGTCAGACAGGCTGTTCCTTGCCCATACGCTGG +
Preference number: 3 (lower is better)
Translates to: PGRARGEGTRVE*SQTGCSLPIRW
Trigger: CCAGCGTATGGGCAAGGAACAGCCTGTCTGACTTCACTCTACCCTAGTGCCCTCTCCCCTGGCTCTCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR CCA 72 bp GGGCCCAGGGTGCTGGACCCCTGCACAGAAATTCCCTaGGGACCCACACCTGAGCAGGATCAAGAGCAAATG +
Preference number: 3 (lower is better)
Translates to: GPRVLDPCTEIP*GPTPEQDQEQM
Trigger: CATTTGCTCTTGATCCTGCTCAGGTGTGGGTCCCCAGGGAATTTCTGTGCAGGGGTCCAGCACCCTGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR CAA 90 bp GTGAATGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAAGTGCAAGCTGCTTCCTGGTaGGTCTGCTCTCGGGTAGAG +
Preference number: 3 (lower is better)
Translates to: VNGSKPSRNTLCLLFPQVQAASW*VCSRVE
Trigger: CTCTACCCGAGAGCAGACCAACCAGGAAGCAGCTTG...CACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR TCA 72 bp CACAAGGCTAGACCCCACACAAGAAGTCTAGTGCCCTaGGGACAGGGAGAGAGCCAGGATAAGCAGGGGCAA +
Preference number: 3 (lower is better)
Translates to: HKARPHTRSLVP*GQGESQDKQGQ
Trigger: TTGCCCCTGCTTATCCTGGCTCTCTCCCTGTCCTCAGGGCACTAGACTTCTTGTGTGGGGTCTAGCCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR CCA 72 bp CCTGGGATGGGGGACGGGCGTGTGTGCAAGGCAGCATaGGAAACAAGTAAGTGCAGAGTGACAAGAACATGG +
Preference number: 3 (lower is better)
Translates to: PGMGDGRVCKAA*ETSKCRVTRTW
Trigger: CCATGTTCTTGTCACTCTGCACTTACTTGTTTCCCATGCTGCCTTGCACACACGCCCGTCCCCCATCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR GCA 72 bp ACAGGCTGTTCCTTGCCCATACGCTGGTGGGTAGGATaGAGGGTCAGGATAGAAGGAGCCCTTAGACAAAGG +
Preference number: 3 (lower is better)
Translates to: TGCSLPIRWWVG*RVRIEGALRQR
Trigger: CCTTTGTCTAAGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCAGCGTATGGGCAAGGAACAGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR TCA 72 bp GCCAATAGGTCATGTGCCCAAAGCCTTCCAATGAGGTaGAACTACTCAGAGAGGTCCCAAAGGCATGCCTCC +
Preference number: 3 (lower is better)
Translates to: ANRSCAQSLPMR*NYSERSQRHAS
Trigger: GGAGGCATGCCTTTGGGACCTCTCTGAGTAGTTTCACCTCATTGGAAGGCTTTGGGCACATGACCTATTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR TCA 72 bp GGTAGGCAGAAAGATATCCTTCTCTACACAAGCGTGTaGATGGATCGAAACCCTCCAGGAACACCCTGTGCC +
Preference number: 3 (lower is better)
Translates to: GRQKDILLYTSV*MDRNPPGTPCA
Trigger: GGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCACACGCTTGTGTAGAGAAGGATATCTTTCTGCCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR GCA 72 bp AATGAGGTGAAACTACTCAGAGAGGTCCCAAAGGCATaGCTCCTCTGGGCACCTTCTCTGGTTAGTCCTGAA +
Preference number: 3 (lower is better)
Translates to: NEVKLLREVPKA*LLWAPSLVSPE
Trigger: TTCAGGACTAACCAGAGAAGGTGCCCAGAGGAGGCATGCCTTTGGGACCTCTCTGAGTAGTTTCACCTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR CCA 72 bp AGGTCCCAAAGGCATGCCTCCTCTGGGCACCTTCTCTaGTTAGTCCTGAATCGAAAATGTCTCCATCTGGTT +
Preference number: 3 (lower is better)
Translates to: RSQRHASSGHLL*LVLNRKCLHLV
Trigger: AACCAGATGGAGACATTTTCGATTCAGGACTAACCAGAGAAGGTGCCCAGAGGAGGCATGCCTTTGGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR CCA 72 bp GGCAGAAAGATATCCTTCTCTACACAAGCGTGTGAATaGATCGAAACCCTCCAGGAACACCCTGTGCCTCCT +
Preference number: 3 (lower is better)
Translates to: GRKISFSTQACE*IETLQEHPVPP
Trigger: AGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCACACGCTTGTGTAGAGAAGGATATCTTTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR CCA 72 bp CCTGGGGACCCACACCTGAGCAGGATCAAGAGCAAATaGTTGGAGGTAGGCAGAAAGATATCCTTCTCTACA +
Preference number: 3 (lower is better)
Translates to: PGDPHLSRIKSK*LEVGRKISFST
Trigger: TGTAGAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR TCA 72 bp AAGAGGCCAATAGGTCATGTGCCCAAAGCCTTCCAATaGGGTGAAACTACTCAGAGAGGTCCCAAAGGCATG +
Preference number: 3 (lower is better)
Translates to: KRPIGHVPKAFQ*GETTQRGPKGM
Trigger: CATGCCTTTGGGACCTCTCTGAGTAGTTTCACCTCATTGGAAGGCTTTGGGCACATGACCTATTGGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR-3UTR CAA 90 bp AGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTACAGAGTGCAACACTTACTaGTGTGGTGATTGGGGCAAG +
Preference number: 3 (lower is better)
Translates to: SRIKSKWLEVGRKISFSTECNTY*CGDWGK
Trigger: CTTGCCCCAATCACCACACAAGTAAGTGTTGCACTC...TGTAGAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp TCCAGGTCTCAGGAGGGGTATCTAGAAAGGGCCCAGGGTGCTGGACCCCTGCACCAGCCTCAGGGCCTTTaGGGGGCTTCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SRSQEGYLERAQGAGPLHQPQGL*GASAPA
Trigger: TGCTGGGGCTGAAGCCCCTCAAAGGCCCTGAGGCTG...GTGCAGGGGTCCAGCACCCTGGGCCCTTTCTAGATACCCCTCCTGAGACCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp TCCAGGTCTCAGGAGGGGTATCTAGAAAGGGCCCAGGGTGCTGGACCCCTGCACCCCAACCCCGGGTGCTaGGCAGACTCAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SRSQEGYLERAQGAGPLHPNPGC*ADSVSP
Trigger: AGGAGAGACTGAGTCTGCTCAGCACCCGGGGTTGGG...GTGCAGGGGTCCAGCACCCTGGGCCCTTTCTAGATACCCCTCCTGAGACCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp TCCAGGTCTCAGGAGGGGTATCTAGAAAGGGCCCAGGGTGCTGGACCCCTGCACGTTCCAGCCCATAGATaGCCTTGGCCCGGGACGCCT +
Preference number: 4 (lower is better)
Translates to: SRSQEGYLERAQGAGPLHVPAHR*PWPGTP
Trigger: AGGCGTCCCGGGCCAAGGTCATCTATGGGCTGGAAC...GTGCAGGGGTCCAGCACCCTGGGCCCTTTCTAGATACCCCTCCTGAGACCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp CCAGGGTGCTGGACCCCTGCACAGAAATTCCCTGGGGACCCACACCTGAGCAGGCTGAGCAGGACACGATaGCCTTGGTGTTCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: PGCWTPAQKFPGDPHLSRLSRTR*PWCSGQ
Trigger: CTGCCCGGAACACCAAGGGCATCGTGTCCTGCTCAG...CCTGCTCAGGTGTGGGTCCCCAGGGAATTTCTGTGCAGGGGTCCAGCACCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp GTGAATGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAAGTGGTAGCTGCGACTGGCTaGGCCGGGCGTCCACACCGG +
Preference number: 4 (lower is better)
Translates to: VNGSKPSRNTLCLLFPQVVAATG*AGRPHR
Trigger: CCGGTGTGGACGCCCGGCCCAGCCAGTCGCAGCTAC...CACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp CCAGGGTGCTGGACCCCTGCACAGAAATTCCCTGGGGACCCACACCTGAGCAGGGAAAGTCCTGGTCCCTaGAGGGGAGGGGGACATCTG +
Preference number: 4 (lower is better)
Translates to: PGCWTPAQKFPGDPHLSRESPGP*RGGGHL
Trigger: CAGATGTCCCCCTCCCCTCCAGGGACCAGGACTTTC...CCTGCTCAGGTGTGGGTCCCCAGGGAATTTCTGTGCAGGGGTCCAGCACCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp GCCCCAGTAGCTGTTCACAGGTTCCCGTGCCACCTCCCTCCTCCTGAGCAGAGACTGAGTGGGGGACCCTaGCCCCAATTGCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: APVAVHRFPCHLPPPEQRLSGGP*PQLQSG
Trigger: CCCACTCTGCAATTGGGGCCAGGGTCCCCCACTCAG...TCTCTGCTCAGGAGGAGGGAGGTGGCACGGGAACCTGTGAACAGCTACTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp GCCCCAGTAGCTGTTCACAGGTTCCCGTGCCACCTCCCTCCTCCTGAGCAGAGAGGAAGCGGTCGGGGCTaGTCTTGCGAAGAAGCGTGT +
Preference number: 4 (lower is better)
Translates to: APVAVHRFPCHLPPPEQRGSGRG*SCEEAC
Trigger: ACACGCTTCTTCGCAAGATCAGCCCCGACCGCTTCC...TCTCTGCTCAGGAGGAGGGAGGTGGCACGGGAACCTGTGAACAGCTACTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp CCAGGGTGCTGGACCCCTGCACAGAAATTCCCTGGGGACCCACACCTGAGCAGGTTCCTGCCAAGCCGCTaGGGAGCCTTCCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: PGCWTPAQKFPGDPHLSRFLPSR*GAFLHF
Trigger: GAAATGGAGGAAGGCTCCTCAGCGGCTTGGCAGGAA...CCTGCTCAGGTGTGGGTCCCCAGGGAATTTCTGTGCAGGGGTCCAGCACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp AAGGGGTCAGAGTGCAGAACTCATGCAGAGGACTCAGGAGCCCCCAGCAGTGGCGCTGCCTGGGAGGCCTaGAGTGTAGCCCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: KGSECRTHAEDSGAPSSGAAWEA*SVALEL
Trigger: AAGCTCCAGGGCTACACTTCAGGCCTCCCAGGCAGC...GCCACTGCTGGGGGCTCCTGAGTCCTCTGCATGAGTTCTGCACTCTGACCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp GTGAATGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAAGTGTATCCCAGGCCCCCGTaGTACCCGGCCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VNGSKPSRNTLCLLFPQVYPRPP*YPASGL
Trigger: CAGCCCAGAGGCCGGGTAGCACGGGGGCCTGGGATA...CACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp CCAGGGTGCTGGACCCCTGCACAGAAATTCCCTGGGGACCCACACCTGAGCAGGCTGCTTTCCACTGTGTaGCCCTCCACTTCCCCTAGC +
Preference number: 4 (lower is better)
Translates to: PGCWTPAQKFPGDPHLSRLLSTV*PSTSPS
Trigger: GCTAGGGGAAGTGGAGGGGCACACAGTGGAAAGCAG...CCTGCTCAGGTGTGGGTCCCCAGGGAATTTCTGTGCAGGGGTCCAGCACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp AAGGGGTCAGAGTGCAGAACTCATGCAGAGGACTCAGGAGCCCCCAGCAGTGGCGGCTGTCCCAGTAACTaGACAGTGGCTGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: KGSECRTHAEDSGAPSSGGCPSN*TVAAWE
Trigger: CTCCCAGGCAGCCACTGTTCAGTTACTGGGACAGCC...GCCACTGCTGGGGGCTCCTGAGTCCTCTGCATGAGTTCTGCACTCTGACCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp TTCCTTGCCCATACGCTGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTCCTCTTCCTGGGACCTaGCTGCCCGGGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: FLAHTLVGRMQGQDRRSPPLPGT*LPGWSP
Trigger: TGGAGACCACCCGGGCAGGCAGGTCCCAGGAAGAGG...AGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCAGCGTATGGGCAAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp GCGTGTGAATGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAGCAGCAGCCAGAGCCTaGTGGCCAGCCTGTACCTCA +
Preference number: 4 (lower is better)
Translates to: ACEWIETLQEHPVPPLPPAAARA*WPACTS
Trigger: TGAGGTACAGGCTGGCCAGCAGGCTCTGGCTGCTGC...TGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCACACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp CACAGGTTCCCGTGCCACCTCCCTCCTCCTGAGCAGAGAACCTGGGAGAGCCAGTCTTGGCAGGGCTCCTaGGTTCTGCTTTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: HRFPCHLPPPEQRTWESQSWQGS*VLLSTV
Trigger: CACAGTGGAAAGCAGAACCCAGGAGCCCTGCCAAGA...CTGGCTCTCCCAGGTTCTCTGCTCAGGAGGAGGGAGGTGGCACGGGAACCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp CAGAGTGCAGAACTCATGCAGAGGACTCAGGAGCCCCCAGCAGTGGCAAGTGTAGAGACGCCTGCACGATaGCCAAAGCCGCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: QSAELMQRTQEPPAVASVETPAR*PKPLAP
Trigger: AGGGGCCAGCGGCTTTGGCCATCGTGCAGGCGTCTC...TACACTTGCCACTGCTGGGGGCTCCTGAGTCCTCTGCATGAGTTCTGCACTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp GCCCCAGTAGCTGTTCACAGGTTCCCGTGCCACCTCCCTCCTCCTGAGCAGAGAGACCAAGTCTCCAGTTaGAGGCTCTTCTTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: APVAVHRFPCHLPPPEQRDQVSS*RLFFCA
Trigger: GGCGCAGAAGAAGAGCCTGCAACTGGAGACTTGGTC...TCTCTGCTCAGGAGGAGGGAGGTGGCACGGGAACCTGTGAACAGCTACTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp GTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGCAAAAGCCAGGGAAGGGCCTCGGAGCTGCTGGCTaGTGCGGGGGCCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: VRIEGALRQRDKQKPGKGLGAAG*CGGPST
Trigger: TGTGCTGGGGCCCCCGCAGCAGCCAGCAGCTCCGAG...GCCCTTCCCTGGCTTTTGCTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp TTCCTTGCCCATACGCTGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTCAGGCTCCCCATTGGTaGGCGCCTCTCCAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: FLAHTLVGRMQGQDRRSPQAPHW*APLQEQ
Trigger: TTGCTCCTGGAGAGGCGCCCACCAATGGGGAGCCTG...AGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCAGCGTATGGGCAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp CTCCAGACCCTACTCCATTCCAGGTCTCAGGAGGGGTATCTAGAAAGGGCCCAGTGGGCGGGGGAACCATaGAAGATGTGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LQTLLHSRSQEGYLERAQWAGEP*KMWAGW
Trigger: CCAGCCAGCCCACATCTTCCATGGTTCCCCCGCCCA...CTGGGCCCTTTCTAGATACCCCTCCTGAGACCTGGAATGGAGTAGGGTCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp TGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAAGTGAGTCCGTGGGTGACTCTGAGTaGGGGACCCTGGCCCCAATT +
Preference number: 4 (lower is better)
Translates to: WIETLQEHPVPPLPPSESVGDSE*GTLAPI
Trigger: AATTGGGGCCAGGGTCCCCCACTCAGAGTCACCCAC...GGACTCACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp CTGGGATGGGGGACGGGCGTGTGTGCAAGGCAGCATGGGAAACAAGTAAGTGCACCTGGGACTCGGCCCTaGCTTCACTTGTCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: LGWGTGVCARQHGKQVSAPGTRP*LHLSLD
Trigger: GTCCAGAGACAAGTGAAGCCAGGGCCGAGTCCCAGG...TGCACTTACTTGTTTCCCATGCTGCCTTGCACACACGCCCGTCCCCCATCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp AAGGGGTCAGAGTGCAGAACTCATGCAGAGGACTCAGGAGCCCCCAGCAGTGGCCACAGCCCCACTGCCTaGAACAGTAAGTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: KGSECRTHAEDSGAPSSGHSPTA*NSKSAG
Trigger: CCCTGCAGACTTACTGTTCCAGGCAGTGGGGCTGTG...GCCACTGCTGGGGGCTCCTGAGTCCTCTGCATGAGTTCTGCACTCTGACCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp CTCCAGACCCTACTCCATTCCAGGTCTCAGGAGGGGTATCTAGAAAGGGCCCAGACAGCTCCGGGTACCTaGGGACCTCCCGTCCACATT +
Preference number: 4 (lower is better)
Translates to: LQTLLHSRSQEGYLERAQTAPGT*GPPVHI
Trigger: AATGTGGACGGGAGGTCCTCAGGTACCCGGAGCTGT...CTGGGCCCTTTCTAGATACCCCTCCTGAGACCTGGAATGGAGTAGGGTCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp TGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAAGTGAGTCCACAATACCTCGGGGCTaGGGCAGAAGTCAGTGGACG +
Preference number: 4 (lower is better)
Translates to: WIETLQEHPVPPLPPSESTIPRG*GRSQWT
Trigger: CGTCCACTGACTTCTGCCTCAGCCCCGAGGTATTGT...GGACTCACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp AAGGGGTCAGAGTGCAGAACTCATGCAGAGGACTCAGGAGCCCCCAGCAGTGGCCTGCCGTTTGTCCACTaGTACAGCCAGTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KGSECRTHAEDSGAPSSGLPFVH*YSQCWK
Trigger: CTTCCAGCACTGGCTGTATCAGTGGACAAACGGCAG...GCCACTGCTGGGGGCTCCTGAGTCCTCTGCATGAGTTCTGCACTCTGACCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp GCCCCAGTAGCTGTTCACAGGTTCCCGTGCCACCTCCCTCCTCCTGAGCAGAGAATGGCTTCTGAAGGCTaGCTCTTCAGACCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: APVAVHRFPCHLPPPEQRMASEG*LFRPQH
Trigger: ATGCTGCGGTCTGAAGAGGCAGCCTTCAGAAGCCAT...TCTCTGCTCAGGAGGAGGGAGGTGGCACGGGAACCTGTGAACAGCTACTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp CACAGGTTCCCGTGCCACCTCCCTCCTCCTGAGCAGAGAACCTGGGAGAGCCAGGCTGTGAGCCTTTTCTaGCAGCAGATGGACTTTTGG +
Preference number: 4 (lower is better)
Translates to: HRFPCHLPPPEQRTWESQAVSLF*QQMDFW
Trigger: CCAAAAGTCCATCTGCTGGCAGAAAAGGCTCACAGC...CTGGCTCTCCCAGGTTCTCTGCTCAGGAGGAGGGAGGTGGCACGGGAACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp TCAGGAGGGGTATCTAGAAAGGGCCCAGGGTGCTGGACCCCTGCACAGAAATTCGGGGCTGCTCCTTCTTaGGGCACTGAGACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SGGVSRKGPGCWTPAQKFGAAPS*GTETGC
Trigger: ACAGCCTGTCTCAGTGCCCCAAGAAGGAGCAGCCCC...GAATTTCTGTGCAGGGGTCCAGCACCCTGGGCCCTTTCTAGATACCCCTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp AAGGGGTCAGAGTGCAGAACTCATGCAGAGGACTCAGGAGCCCCCAGCAGTGGCAGTAGCCATGGCTTCTaGTGGGTGACTCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: KGSECRTHAEDSGAPSSGSSHGF*WVTLSG
Trigger: CCCACTCAGAGTCACCCACCAGAAGCCATGGCTACT...GCCACTGCTGGGGGCTCCTGAGTCCTCTGCATGAGTTCTGCACTCTGACCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp TGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAAGTGAGTCCCCACATTTGGCTCCTTaGCACAGGCTCCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: WIETLQEHPVPPLPPSESPHLAP*HRLPHC
Trigger: GCAGTGAGGGAGCCTGTGCCAAGGAGCCAAATGTGG...GGACTCACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp ATTCCCTGGGGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGTTCGCCTCGACGTCCTaGGACTCAGCCCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: IPWGPTPEQDQEQMVGGRFASTS*DSAQPP
Trigger: AGGTGGCTGGGCTGAGTCCCAGGACGTCGAGGCGAA...CCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCCCCAGGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp TTCCTTGCCCATACGCTGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTTGTAGCCCTGGAGCTTaGAGCGCTCTTCCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: FLAHTLVGRMQGQDRRSPCSPGA*SALPGA
Trigger: GGCTCCAGGAAGAGCGCTCCAAGCTCCAGGGCTACA...AGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCAGCGTATGGGCAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp AAGGGGTCAGAGTGCAGAACTCATGCAGAGGACTCAGGAGCCCCCAGCAGTGGCGTCTCCTCTGTGAGCTaGGCAATGATGGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KGSECRTHAEDSGAPSSGVSSVS*AMMEQK
Trigger: CTTCTGCTCCATCATTGCTCAGCTCACAGAGGAGAC...GCCACTGCTGGGGGCTCCTGAGTCCTCTGCATGAGTTCTGCACTCTGACCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp GCGTGTGAATGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAGCAGCATCTTCTTCCTaGCACCTGTACAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ACEWIETLQEHPVPPLPPAASSS*HLYSCR
Trigger: CCTGCAGCTGTACAGGTGTCAGGAAGAAGATGCTGC...TGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCACACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp TTCCTTGCCCATACGCTGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTTTTGGAGGGCTGTTCTaGGGCCCCAGTTCCATGACC +
Preference number: 4 (lower is better)
Translates to: FLAHTLVGRMQGQDRRSPFGGLF*GPSSMT
Trigger: GGTCATGGAACTGGGGCCTCAGAACAGCCCTCCAAA...AGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCAGCGTATGGGCAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp TTCCTTGCCCATACGCTGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTATCCACCGCAGGCTCTaGGTCCAGGCCACTGTCTTT +
Preference number: 4 (lower is better)
Translates to: FLAHTLVGRMQGQDRRSPIHRRL*VQATVF
Trigger: AAAGACAGTGGCCTGGACTCAGAGCCTGCGGTGGAT...AGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCAGCGTATGGGCAAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp CAGAGTGCAGAACTCATGCAGAGGACTCAGGAGCCCCCAGCAGTGGCAAGTGTAAGGCTGTCTTCCTGGTaGTTTCTATCCCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QSAELMQRTQEPPAVASVRLSSW*FLSQAP
Trigger: GGGGGCCTGGGATAGAAAGCACCAGGAAGACAGCCT...TACACTTGCCACTGCTGGGGGCTCCTGAGTCCTCTGCATGAGTTCTGCACTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp GCGTGTGAATGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCATGGCTCGTTTGTCCTTaGAAGGGGCTATCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: ACEWIETLQEHPVPPLPPWLVCP*KGLSRV
Trigger: CACCCGAGATAGCCCCTTGCAAGGACAAACGAGCCA...TGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCACACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp AGGCTGTTCCTTGCCCATACGCTGGTGGGTAGGATGCAGGGTCAGGATAGAAGGCTGCCACCTCTCACCTaGCTGCATCTGTCCTACCTG +
Preference number: 4 (lower is better)
Translates to: RLFLAHTLVGRMQGQDRRLPPLT*LHLSYL
Trigger: CAGGTAGGACAGATGCAGGCAGGTGAGAGGTGGCAG...CCTTCTATCCTGACCCTGCATCCTACCCACCAGCGTATGGGCAAGGAACAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp TCCAGGTCTCAGGAGGGGTATCTAGAAAGGGCCCAGGGTGCTGGACCCCTGCACACATCTGTGTTTGTGTaGAGAGAAGCTGCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SRSQEGYLERAQGAGPLHTSVFV*REAAVP
Trigger: AGGCACCGCAGCTTCTCTGCACACAAACACAGATGT...GTGCAGGGGTCCAGCACCCTGGGCCCTTTCTAGATACCCCTCCTGAGACCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp CTCCAGACCCTACTCCATTCCAGGTCTCAGGAGGGGTATCTAGAAAGGGCCCAGAAGTCTGCAGGGGCTTaGCCAGATCTTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LQTLLHSRSQEGYLERAQKSAGA*PDLPPG
Trigger: CCCTGGAGGAAGATCTGGGCAAGCCCCTGCAGACTT...CTGGGCCCTTTCTAGATACCCCTCCTGAGACCTGGAATGGAGTAGGGTCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp GCGTGTGAATGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCATGTGGTCTCGAACAGTaGCTGGGTCTCCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: ACEWIETLQEHPVPPLPPCGLEQ*LGLLCE
Trigger: CTCACAGAGGAGACCCAGCCACTGTTCGAGACCACA...TGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCACACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp TCAGGAGGGGTATCTAGAAAGGGCCCAGGGTGCTGGACCCCTGCACAGAAATTCGGGGGTGTTGGGACCTaGGTAGAGGCTGAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SGGVSRKGPGCWTPAQKFGGVGT*VEAEGR
Trigger: TCTACCTTCAGCCTCTACCCAGGTCCCAACACCCCC...GAATTTCTGTGCAGGGGTCCAGCACCCTGGGCCCTTTCTAGATACCCCTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp GGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATGGGAGCCACGGTTGCTaGGGACTCCAGAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GPTPEQDQEQMVGGRQKDGSHGC*GLQSLS
Trigger: GGAGAGGCTCTGGAGTCCCCAGCAACCGTGGCTCCC...ATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp GTGAAACTACTCAGAGAGGTCCCAAAGGCATGCCTCCTCTGGGCACCTTCTCTGTGGAGCCTTTGGCCTTaGCTTGAGGGTGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VKLLREVPKACLLWAPSLWSLWP*LEGGQP
Trigger: AGGCTGCCCACCCTCAAGCCAAGGCCAAAGGCTCCA...CAGAGAAGGTGCCCAGAGGAGGCATGCCTTTGGGACCTCTCTGAGTAGTTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp CTCCAGACCCTACTCCATTCCAGGTCTCAGGAGGGGTATCTAGAAAGGGCCCAGCATCCTCATGGCTTCTaGAGGCTGCCTCTTCAGACC +
Preference number: 4 (lower is better)
Translates to: LQTLLHSRSQEGYLERAQHPHGF*RLPLQT
Trigger: GGTCTGAAGAGGCAGCCTTCAGAAGCCATGAGGATG...CTGGGCCCTTTCTAGATACCCCTCCTGAGACCTGGAATGGAGTAGGGTCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp TTCCTTGCCCATACGCTGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTGTTTGCCTCTCCATCTaGCCCTGCTCTGACCTTAGG +
Preference number: 4 (lower is better)
Translates to: FLAHTLVGRMQGQDRRSPVCLSI*PCSDLR
Trigger: CCTAAGGTCAGAGCAGGGTCAGATGGAGAGGCAAAC...AGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCAGCGTATGGGCAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp CACAGGTTCCCGTGCCACCTCCCTCCTCCTGAGCAGAGAACCTGGGAGAGCCAGCGCCCATGTCAAGACTaGGTCACTAACAATGTTGAA +
Preference number: 4 (lower is better)
Translates to: HRFPCHLPPPEQRTWESQRPCQD*VTNNVE
Trigger: TTCAACATTGTTAGTGACTCAGTCTTGACATGGGCG...CTGGCTCTCCCAGGTTCTCTGCTCAGGAGGAGGGAGGTGGCACGGGAACCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp GGGCAAAAAGGTAAATGCTGGCCTGCTGGCCCCAGAGTGCAACACTTACTTGTGTCGCCCACTGGGTGCTaGTCCTTCGCCCATGTCAAG +
Preference number: 4 (lower is better)
Translates to: GQKGKCWPAGPRVQHLLVSPTGC*SFAHVK
Trigger: CTTGACATGGGCGAAGGATCAGCACCCAGTGGGCGA...CACAAGTAAGTGTTGCACTCTGGGGCCAGCAGGCCAGCATTTACCTTTTTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp CTGGGATGGGGGACGGGCGTGTGTGCAAGGCAGCATGGGAAACAAGTAAGTGCAGGACCTTGTCTTGAATaGCCAGGACAGAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LGWGTGVCARQHGKQVSAGPCLE*PGQRLS
Trigger: AGACAGCCTCTGTCCTGGGCATTCAAGACAAGGTCC...TGCACTTACTTGTTTCCCATGCTGCCTTGCACACACGCCCGTCCCCCATCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp CCAGGGTGCTGGACCCCTGCACAGAAATTCCCTGGGGACCCACACCTGAGCAGGTGCATCTGTCCTACCTaGATATCCACTCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: PGCWTPAQKFPGDPHLSRCICPT*ISTLLC
Trigger: ACAGAGAAGAGTGGATATGCAGGTAGGACAGATGCA...CCTGCTCAGGTGTGGGTCCCCAGGGAATTTCTGTGCAGGGGTCCAGCACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp CTGGGATGGGGGACGGGCGTGTGTGCAAGGCAGCATGGGAAACAAGTAAGTGCACGAAAGCTACAGGAATaGTGCCTGCTGCTGACTGTG +
Preference number: 4 (lower is better)
Translates to: LGWGTGVCARQHGKQVSARKLQE*CLLLTV
Trigger: CACAGTCAGCAGCAGGCAGCATTCCTGTAGCTTTCG...TGCACTTACTTGTTTCCCATGCTGCCTTGCACACACGCCCGTCCCCCATCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp ATTCCCTGGGGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGAGGGCTCCTGGGTTCTaGTTTCCACTGTGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: IPWGPTPEQDQEQMVGGRRAPGF*FPLCAP
Trigger: AGGGGCACACAGTGGAAAGCAGAACCCAGGAGCCCT...CCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCCCCAGGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp GTGAAACTACTCAGAGAGGTCCCAAAGGCATGCCTCCTCTGGGCACCTTCTCTGCCAGAGCTTCCTGCTTaGCTTCATCCACCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VKLLREVPKACLLWAPSLPELPA*LHPPQA
Trigger: AGCCTGCGGTGGATGAAGGCAAGCAGGAAGCTCTGG...CAGAGAAGGTGCCCAGAGGAGGCATGCCTTTGGGACCTCTCTGAGTAGTTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp AAATGTCTCCATCTGGTTCAAGCTGCTTCCTGGTTGGTCTGCTCTCGGGTAGAGTGGCCCCTCGTCCCCTaGACTCCTGTTCACTTCGCC +
Preference number: 4 (lower is better)
Translates to: KCLHLVQAASWLVCSRVEWPLVP*TPVHFA
Trigger: GGCGAAGTGAACAGGAGTGCAGGGGACGAGGGGCCA...CTCTACCCGAGAGCAGACCAACCAGGAAGCAGCTTGAACCAGATGGAGACATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp TGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAAGTGAGTCCAAGGTTTGGCATTTCTaGAAGGCCTCGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WIETLQEHPVPPLPPSESKVWHF*KASELL
Trigger: CAGCAGCTCCGAGGCCTTGCAGAAATGCCAAACCTT...GGACTCACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp GTGAATGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAAGTGGTACCAGGTCACCTCTaGCTCTGGGTATCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: VNGSKPSRNTLCLLFPQVVPGHL*LWVSCD
Trigger: GTCACAGGATACCCAGAGCCAGAGGTGACCTGGTAC...CACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp TGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGGGCTTGGAACAGGGGTaGGTGCAGGGACTGGGACAG +
Preference number: 4 (lower is better)
Translates to: WWVGCRVRIEGALRQRDKGLEQG*VQGLGQ
Trigger: CTGTCCCAGTCCCTGCACCCACCCCTGTTCCAAGCC...CTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp AAATGTCTCCATCTGGTTCAAGCTGCTTCCTGGTTGGTCTGCTCTCGGGTAGAGGAACTCGGAAAGTCCTaGTCCCTGGAGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: KCLHLVQAASWLVCSRVEELGKS*SLEGRG
Trigger: CCCCCTCCCCTCCAGGGACCAGGACTTTCCGAGTTC...CTCTACCCGAGAGCAGACCAACCAGGAAGCAGCTTGAACCAGATGGAGACATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp TGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGCTGGCTTTTCGGGCCTaGGTAGGGGACCGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: WWVGCRVRIEGALRQRDKLAFRA*VGDRLS
Trigger: GGAGAGACGGTCCCCTACCCAGGCCCGAAAAGCCAG...CTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp GTGAAACTACTCAGAGAGGTCCCAAAGGCATGCCTCCTCTGGGCACCTTCTCTGCTTCCAGAGCTGGGGTaGGACAACCGGTTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: VKLLREVPKACLLWAPSLLPELG*DNRLLD
Trigger: ATCAAGCAACCGGTTGTCTCACCCCAGCTCTGGAAG...CAGAGAAGGTGCCCAGAGGAGGCATGCCTTTGGGACCTCTCTGAGTAGTTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp ATTCCCTGGGGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCTTCCTCTCTGGAGATaGAGCCGGACAATACCTCGG +
Preference number: 4 (lower is better)
Translates to: IPWGPTPEQDQEQMVGGRLPLWR*SRTIPR
Trigger: CCGAGGTATTGTCCGGCTTCATCTCCAGAGAGGAAG...CCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCCCCAGGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp TGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGACACCTGCTCTGAGCTaGGGCTTGGAACAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: WWVGCRVRIEGALRQRDKTPALS*GLEQGW
Trigger: CCACCCCTGTTCCAAGCCGCAGCTCAGAGCAGGTGT...CTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp GTGAAACTACTCAGAGAGGTCCCAAAGGCATGCCTCCTCTGGGCACCTTCTCTGAGACGGTATCGGAGCTaGTGTTGGCAGACTTGGTGG +
Preference number: 4 (lower is better)
Translates to: VKLLREVPKACLLWAPSLRRYRS*CWQTWW
Trigger: CCACCAAGTCTGCCAACAGCAGCTCCGATACCGTCT...CAGAGAAGGTGCCCAGAGGAGGCATGCCTTTGGGACCTCTCTGAGTAGTTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp GGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATCGGTGCCTTCTCACCTaGCTGTGTCCTTGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: GPTPEQDQEQMVGGRQKDRCLLT*LCPWRS
Trigger: GCTTCGCCAAGGACACAGGCAGGTGAGAAGGCACCG...ATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp AGCAACAAACAGGACACACAGTCACTGCCTTTATTGCATAGCAAGGGGAGCAGGGCGTCTCCAGGGTCTTaGTGCCACCTCTCACCTGCC +
Preference number: 4 (lower is better)
Translates to: SNKQDTQSLPLLHSKGSRASPGS*CHLSPA
Trigger: GGCAGGTGAGAGGTGGCAGCAAGACCCTGGAGACGC...CCTGCTCCCCTTGCTATGCAATAAAGGCAGTGACTGTGTGTCCTGTTTGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp TCAGGAGGGGTATCTAGAAAGGGCCCAGGGTGCTGGACCCCTGCACAGAAATTCAAGATGTGGGCTGGCTaGAGACCATCGGTACCTTCT +
Preference number: 4 (lower is better)
Translates to: SGGVSRKGPGCWTPAQKFKMWAG*RPSVPS
Trigger: AGAAGGTACCGATGGTCTCCAGCCAGCCCACATCTT...GAATTTCTGTGCAGGGGTCCAGCACCCTGGGCCCTTTCTAGATACCCCTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp ATTCCCTGGGGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGTATCGGAGCTGCTGTTaGCAGACTTGGTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: IPWGPTPEQDQEQMVGGRYRSCC*QTWWEP
Trigger: TGGCTCCCACCAAGTCTGCCAACAGCAGCTCCGATA...CCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCCCCAGGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp GTGAAACTACTCAGAGAGGTCCCAAAGGCATGCCTCCTCTGGGCACCTTCTCTGCAGGAAGAGAAGGCATaGCAGGCACCTCCTGACTCA +
Preference number: 4 (lower is better)
Translates to: VKLLREVPKACLLWAPSLQEEKA*QAPPDS
Trigger: TGAGTCAGGAGGTGCCTGCCATGCCTTCTCTTCCTG...CAGAGAAGGTGCCCAGAGGAGGCATGCCTTTGGGACCTCTCTGAGTAGTTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp TGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGGTGTCTGCCACTTCCTaGGACTCGGCCCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: WWVGCRVRIEGALRQRDKVSATS*DSALAS
Trigger: TGAAGCCAGGGCCGAGTCCCAGGAAGTGGCAGACAC...CTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp CCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCGATGGCCAAAGCCGCTaGCCCCTCGTCCCCTGCACT +
Preference number: 4 (lower is better)
Translates to: PEQDQEQMVGGRQKDILLDGQSR*PLVPCT
Trigger: AGTGCAGGGGACGAGGGGCCAGCGGCTTTGGCCATC...GAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp GTGAATGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAAGTGCAGTGCTGGAAGGTTTaGCATTTCTGCAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: VNGSKPSRNTLCLLFPQVQCWKV*HFCKAS
Trigger: CGAGGCCTTGCAGAAATGCCAAACCTTCCAGCACTG...CACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp GTGAATGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAAGTGTGGGAAGAGGCAAACTaGTCCAGCAGGGCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: VNGSKPSRNTLCLLFPQVWEEAN*SSRAGK
Trigger: TTTTCCTGCCCTGCTGGACCAGTTTGCCTCTTCCCA...CACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp GGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATCCCGGGTGGTCTCCATaGACATGTCCTTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GPTPEQDQEQMVGGRQKDPGWSP*TCPSGR
Trigger: TCTCCCTGAAGGACATGTTCATGGAGACCACCCGGG...ATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp GGGCAAAAAGGTAAATGCTGGCCTGCTGGCCCCAGAGTGCAACACTTACTTGTGCTGATGGTGAGCCTTTaGGAGCTCCAGGAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: GQKGKCWPAGPRVQHLLVLMVSL*ELQEVS
Trigger: GCTCACTTCCTGGAGCTCTCAAAGGCTCACCATCAG...CACAAGTAAGTGTTGCACTCTGGGGCCAGCAGGCCAGCATTTACCTTTTTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp TCAGGAGGGGTATCTAGAAAGGGCCCAGGGTGCTGGACCCCTGCACAGAAATTCGCTGTCCTCTTGCTCTaGCCTTTGATGTGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: SGGVSRKGPGCWTPAQKFAVLLL*PLMCLS
Trigger: GGACAAACACATCAAAGGTCAGAGCAAGAGGACAGC...GAATTTCTGTGCAGGGGTCCAGCACCCTGGGCCCTTTCTAGATACCCCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp GGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATCACAACGTCCGTCGGTaGCTTCTCACCTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: GPTPEQDQEQMVGGRQKDHNVRR*LLTCLC
Trigger: ACACAGGCAGGTGAGAAGGCACCGACGGACGTTGTG...ATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp CTGGGATGGGGGACGGGCGTGTGTGCAAGGCAGCATGGGAAACAAGTAAGTGCATTCTTGGACACAGGGTaGCTCTGTGCTCTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: LGWGTGVCARQHGKQVSAFLDTG*LCALLK
Trigger: TTTGAGAAGAGCACAGAGGCACCCTGTGTCCAAGAA...TGCACTTACTTGTTTCCCATGCTGCCTTGCACACACGCCCGTCCCCCATCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp GGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATGACCCTGGCCCCAATTaGAGAGTGGGAGCAGAACTC +
Preference number: 4 (lower is better)
Translates to: GPTPEQDQEQMVGGRQKDDPGPN*RVGAEL
Trigger: GAGTTCTGCTCCCACTCTGCAATTGGGGCCAGGGTC...ATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp GGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATTGCTCCTTCCAGAGCTaGGGTGAGACAACCGGTTGC +
Preference number: 4 (lower is better)
Translates to: GPTPEQDQEQMVGGRQKDCSFQS*GETTGC
Trigger: GCAACCGGTTGTCTCACCCCAGCTCTGGAAGGAGCA...ATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp AAATGTCTCCATCTGGTTCAAGCTGCTTCCTGGTTGGTCTGCTCTCGGGTAGAGAGTCGGCGCTTTCTTTaGAAGCGGTCGGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: KCLHLVQAASWLVCSRVESRRFL*KRSGLI
Trigger: GATCAGCCCCGACCGCTTCCAAAGAAAGCGCCGACT...CTCTACCCGAGAGCAGACCAACCAGGAAGCAGCTTGAACCAGATGGAGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp GGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATGTCTTCCCCGTTCTCTaGAGCAGGCTCCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: GPTPEQDQEQMVGGRQKDVFPVL*SRLPIG
Trigger: ACCAATGGGGAGCCTGCTCCAGAGAACGGGGAAGAC...ATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp AAATGTCTCCATCTGGTTCAAGCTGCTTCCTGGTTGGTCTGCTCTCGGGTAGAGGGGCTGGGTCTGAGCTaGCTGTGTATCCGTGGACTT +
Preference number: 4 (lower is better)
Translates to: KCLHLVQAASWLVCSRVEGLGLS*LCIRGL
Trigger: AAGTCCACGGATACACAGCCAGCTCAGACCCAGCCC...CTCTACCCGAGAGCAGACCAACCAGGAAGCAGCTTGAACCAGATGGAGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp GGGCAAAAAGGTAAATGCTGGCCTGCTGGCCCCAGAGTGCAACACTTACTTGTGCCAGTAACTGAACAGTaGCTGCCTGGGAGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: GQKGKCWPAGPRVQHLLVPVTEQ*LPGRPE
Trigger: TTCAGGCCTCCCAGGCAGCCACTGTTCAGTTACTGG...CACAAGTAAGTGTTGCACTCTGGGGCCAGCAGGCCAGCATTTACCTTTTTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp CAGAGTGCAGAACTCATGCAGAGGACTCAGGAGCCCCCAGCAGTGGCAAGTGTAGGTTGCCTTGATGAGTaGTCTCGTATTTTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: QSAELMQRTQEPPAVASVGCLDE*SRILAS
Trigger: GCTTGCCAAAATACGAGATCACTCATCAAGGCAACC...TACACTTGCCACTGCTGGGGGCTCCTGAGTCCTCTGCATGAGTTCTGCACTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp GGGCAAAAAGGTAAATGCTGGCCTGCTGGCCCCAGAGTGCAACACTTACTTGTGCAGGAGCAAAACTGTTaGTCAAACCCAACCCCGGGT +
Preference number: 4 (lower is better)
Translates to: GQKGKCWPAGPRVQHLLVQEQNC*SNPTPG
Trigger: ACCCGGGGTTGGGTTTGATCAACAGTTTTGCTCCTG...CACAAGTAAGTGTTGCACTCTGGGGCCAGCAGGCCAGCATTTACCTTTTTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp TGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGCCTTTCTTCTGGGGTTaGGGACTCAGCTGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: WWVGCRVRIEGALRQRDKPFFWG*GLSCEP
Trigger: AGGCTCACAGCTGAGTCCTCAACCCCAGAAGAAAGG...CTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp GCGTGTGAATGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCATGTGTGTTTTCTTCCTaGTTCCAGTTCTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: ACEWIETLQEHPVPPLPPCVFSS*FQFSHP
Trigger: TGGATGGGAGAACTGGAAGCAGGAAGAAAACACACA...TGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCACACGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp CCAGGGTGCTGGACCCCTGCACAGAAATTCCCTGGGGACCCACACCTGAGCAGGATATGGTATATTGTTTaGAGGCCGGTAGATCAAGTA +
Preference number: 4 (lower is better)
Translates to: PGCWTPAQKFPGDPHLSRIWYIV*RPVDQV
Trigger: TACTTGATCTACCGGCCTGCAAACAATATACCATAT...CCTGCTCAGGTGTGGGTCCCCAGGGAATTTCTGTGCAGGGGTCCAGCACCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp GGGCAAAAAGGTAAATGCTGGCCTGCTGGCCCCAGAGTGCAACACTTACTTGTGGGTCACCTCTGGCTCTaGGTATCCTGTGACAATGCA +
Preference number: 4 (lower is better)
Translates to: GQKGKCWPAGPRVQHLLVGHLWL*VSCDNA
Trigger: TGCATTGTCACAGGATACCCAGAGCCAGAGGTGACC...CACAAGTAAGTGTTGCACTCTGGGGCCAGCAGGCCAGCATTTACCTTTTTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp ATTCCCTGGGGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAGGCTTGGTAGATaGCAGCATCTTCTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: IPWGPTPEQDQEQMVGGRQRLGR*QHLLPD
Trigger: GTCAGGAAGAAGATGCTGCCATCTACCAAGCCTCTG...CCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCCCCAGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp TGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGCCTTGCGCTTCAACTTaGCGAACCAGCGCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: WWVGCRVRIEGALRQRDKPCAST*RTSAGE
Trigger: TTCACCAGCGCTGGTTCGCCAAGTTGAAGCGCAAGG...CTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp TGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGCAGAGGCTGTCTTCCTaGTGCTTTCTATCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: WWVGCRVRIEGALRQRDKQRLSS*CFLSQA
Trigger: GGCCTGGGATAGAAAGCACCAGGAAGACAGCCTCTG...CTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp CCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCGGTTTTTCCTCTTCCTaGGACCTGCCTGCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: PEQDQEQMVGGRQKDILLGFSSS*DLPARV
Trigger: CACCCGGGCAGGCAGGTCCCAGGAAGAGGAAAAACC...GAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp ATTCCCTGGGGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCCTGGTACTTGGAGGTaGAGGTTTTTCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: IPWGPTPEQDQEQMVGGRPGTWR*RFFLFL
Trigger: CAGGAAGAGGAAAAACCTCCACCTCCAAGTACCAGG...CCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCCCCAGGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp ATTCCCTGGGGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGAGCTACCCTGGTACTTaGAGGTGGAGGTTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: IPWGPTPEQDQEQMVGGRSYPGT*RWRFFL
Trigger: GAGGAAAAACCTCCACCTCCAAGTACCAGGGTAGCT...CCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCCCCAGGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp GTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGCAAAAGCCAGGGAAGGGCCTCCAGAGCCTCTCCTaGAGTCTTGTGGCTCGTTTG +
Preference number: 4 (lower is better)
Translates to: VRIEGALRQRDKQKPGKGLQSLS*SLVARL
Trigger: CAAACGAGCCACAAGACTCCAGGAGAGGCTCTGGAG...GCCCTTCCCTGGCTTTTGCTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp CACAGGTTCCCGTGCCACCTCCCTCCTCCTGAGCAGAGAACCTGGGAGAGCCAGACAATGTTGAAAAACTaGCACCAAAGCTTCAGACTA +
Preference number: 4 (lower is better)
Translates to: HRFPCHLPPPEQRTWESQTMLKN*HQSFRL
Trigger: TAGTCTGAAGCTTTGGTGCCAGTTTTTCAACATTGT...CTGGCTCTCCCAGGTTCTCTGCTCAGGAGGAGGGAGGTGGCACGGGAACCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp AGGCTGTTCCTTGCCCATACGCTGGTGGGTAGGATGCAGGGTCAGGATAGAAGGCTCCAGGGTTGCATATaGTATATTGTTTGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: RLFLAHTLVGRMQGQDRRLQGCI*YIVCRP
Trigger: CGGCCTGCAAACAATATACCATATGCAACCCTGGAG...CCTTCTATCCTGACCCTGCATCCTACCCACCAGCGTATGGGCAAGGAACAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
3UTR CAA 72 bp GAGAGCAACAAACAGGACACACAGTCACTGCCTTTATaGCATAGCAAGGGGAGCAGGCTAGCTCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: ESNKQDTQSLPL*HSKGSRLAPDP
Trigger: AGGGTCTGGAGCTAGCCTGCTCCCCTTGCTATGCAATAAAGGCAGTGACTGTGTGTCCTGTTTGTTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp TGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGGCGAACCAGCGCTGGTaGATCTTGTACTCCGTCATA +
Preference number: 4 (lower is better)
Translates to: WWVGCRVRIEGALRQRDKANQRW*ILYSVI
Trigger: TATGACGGAGTACAAGATTCACCAGCGCTGGTTCGC...CTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp ACTGTGATGAATGAGGCAAAGAAGCTGAAAGGAGATGAAACCCTGAGAGGCACATGTGCTCCGTCTCCCTaGGTCCTCCCATCCACTTGC +
Preference number: 4 (lower is better)
Translates to: TVMNEAKKLKGDETLRGTCAPSP*VLPSTC
Trigger: GCAAGTGGATGGGAGGACTCAGGGAGACGGAGCACA...TGTGCCTCTCAGGGTTTCATCTCCTTTCAGCTTCTTTGCCTCATTCATCACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp ACTGTGATGAATGAGGCAAAGAAGCTGAAAGGAGATGAAACCCTGAGAGGCACAGAGAGCTCCAGGAAGTaGGCTGAGGCTGGCCATGGA +
Preference number: 4 (lower is better)
Translates to: TVMNEAKKLKGDETLRGTESSRK*AEAGHG
Trigger: TCCATGGCCAGCCTCAGCTCACTTCCTGGAGCTCTC...TGTGCCTCTCAGGGTTTCATCTCCTTTCAGCTTCTTTGCCTCATTCATCACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp CCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTCCTTCTTGGGGCACTaGGACAGGCTGTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PEQDQEQMVGGRQKDILLSFLGH*DRLSSC
Trigger: GCAAGAGGACAGCCTGTCTCAGTGCCCCAAGAAGGA...GAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp ATTCCCTGGGGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGGAAGCCTCTTTTCCATaGTTCCAGCTCTGCTCAATC +
Preference number: 4 (lower is better)
Translates to: IPWGPTPEQDQEQMVGGREASFP*FQLCSI
Trigger: GATTGAGCAGAGCTGGAAGCATGGAAAAGAGGCTTC...CCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCCCCAGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp GGGCAAAAAGGTAAATGCTGGCCTGCTGGCCCCAGAGTGCAACACTTACTTGTGGTCCTCCCATCCACTTaGAGCTTTCCATCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GQKGKCWPAGPRVQHLLVVLPST*SFPSVC
Trigger: ACACACAGATGGAAAGCTGCAAGTGGATGGGAGGAC...CACAAGTAAGTGTTGCACTCTGGGGCCAGCAGGCCAGCATTTACCTTTTTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp CAGAGTGCAGAACTCATGCAGAGGACTCAGGAGCCCCCAGCAGTGGCAAGTGTAAGTGATCTCGTATTTTaGCAAGCCACAGTAACGGTC +
Preference number: 4 (lower is better)
Translates to: QSAELMQRTQEPPAVASVSDLVF*QATVTV
Trigger: GACCGTTACTGTGGCTTGCCAAAATACGAGATCACT...TACACTTGCCACTGCTGGGGGCTCCTGAGTCCTCTGCATGAGTTCTGCACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp GGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATCAATCTCCCTCATCTTaGCTGCAGCCTTGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: GPTPEQDQEQMVGGRQKDQSPSS*LQPCAS
Trigger: TGAAGCGCAAGGCTGCAGCCAAGATGAGGGAGATTG...ATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp AAATGTCTCCATCTGGTTCAAGCTGCTTCCTGGTTGGTCTGCTCTCGGGTAGAGCTGGCTGTGTATCCGTaGACTTCTCCCTTCTACTGG +
Preference number: 4 (lower is better)
Translates to: KCLHLVQAASWLVCSRVELAVYP*TSPFYW
Trigger: CCAGTAGAAGGGAGAAGTCCACGGATACACAGCCAG...CTCTACCCGAGAGCAGACCAACCAGGAAGCAGCTTGAACCAGATGGAGACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp AGCAACAAACAGGACACACAGTCACTGCCTTTATTGCATAGCAAGGGGAGCAGGAGCAGCCCATCCTCATaGCTTCTGAAGGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SNKQDTQSLPLLHSKGSRSSPSS*LLKAAS
Trigger: AGAGGCAGCCTTCAGAAGCCATGAGGATGGGCTGCT...CCTGCTCCCCTTGCTATGCAATAAAGGCAGTGACTGTGTGTCCTGTTTGTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp CCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCAGCCATGGCTTCTGGTaGGTGACTCTGAGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: PEQDQEQMVGGRQKDILLSHGFW*VTLSGG
Trigger: TCCCCCACTCAGAGTCACCCACCAGAAGCCATGGCT...GAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp TCAGGAGGGGTATCTAGAAAGGGCCCAGGGTGCTGGACCCCTGCACAGAAATTCTCTCGACTCATGTTCTaGATCTTGCATCCCTGGATA +
Preference number: 4 (lower is better)
Translates to: SGGVSRKGPGCWTPAQKFSRLMF*ILHPWI
Trigger: TATCCAGGGATGCAAGATCCAGAACATGAGTCGAGA...GAATTTCTGTGCAGGGGTCCAGCACCCTGGGCCCTTTCTAGATACCCCTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp GGGCAAAAAGGTAAATGCTGGCCTGCTGGCCCCAGAGTGCAACACTTACTTGTGCAGCAGATGGACTTTTaGAGCCTTTGGCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: GQKGKCWPAGPRVQHLLVQQMDF*SLWPWL
Trigger: AAGCCAAGGCCAAAGGCTCCAAAAGTCCATCTGCTG...CACAAGTAAGTGTTGCACTCTGGGGCCAGCAGGCCAGCATTTACCTTTTTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp AAATGTCTCCATCTGGTTCAAGCTGCTTCCTGGTTGGTCTGCTCTCGGGTAGAGAAGCTACAGGAATGCTaGCTGCTGCTGACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: KCLHLVQAASWLVCSRVEKLQEC*LLLTVS
Trigger: AGACACAGTCAGCAGCAGGCAGCATTCCTGTAGCTT...CTCTACCCGAGAGCAGACCAACCAGGAAGCAGCTTGAACCAGATGGAGACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp AGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTACACCTCCCGTCCACATTTaGCTCCTTGGCACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SRIKSKWLEVGRKISFSTPPVHI*LLGTGS
Trigger: GGAGCCTGTGCCAAGGAGCCAAATGTGGACGGGAGG...TGTAGAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp GTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGCAAAAGCCAGGGAAGGGCGTAGATCAAGTAGAGTaGGATGATCTCGGGCACCTC +
Preference number: 4 (lower is better)
Translates to: VRIEGALRQRDKQKPGKGVDQVE*DDLGHL
Trigger: GAGGTGCCCGAGATCATCCCACTCTACTTGATCTAC...GCCCTTCCCTGGCTTTTGCTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp AGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTACATGGAGCCCTGGGGACTaGGAAGGCCTTTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SRIKSKWLEVGRKISFSTWSPGD*EGLSSG
Trigger: CCCAGAAGAAAGGCCTTCCCAGTCCCCAGGGCTCCA...TGTAGAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp ACTGTGATGAATGAGGCAAAGAAGCTGAAAGGAGATGAAACCCTGAGAGGCACAGAGGCCCCAGTTCCATaGCCTCGCAGATGTATGTCA +
Preference number: 4 (lower is better)
Translates to: TVMNEAKKLKGDETLRGTEAPVP*PRRCMS
Trigger: TGACATACATCTGCGAGGTCATGGAACTGGGGCCTC...TGTGCCTCTCAGGGTTTCATCTCCTTTCAGCTTCTTTGCCTCATTCATCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp TGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGAATGCTGCCTGCTGCTaGCTGTGTCTCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: WWVGCRVRIEGALRQRDKNAACC*LCLFFF
Trigger: GAAGAAAAAGAGACACAGTCAGCAGCAGGCAGCATT...CTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp TTCCTTGCCCATACGCTGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTATCTTCCTCCAGGGTTaGATATGGTATATTGTTTGC +
Preference number: 4 (lower is better)
Translates to: FLAHTLVGRMQGQDRRSPIFLQG*IWYIVC
Trigger: GCAAACAATATACCATATGCAACCCTGGAGGAAGAT...AGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCAGCGTATGGGCAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp ACTGTGATGAATGAGGCAAAGAAGCTGAAAGGAGATGAAACCCTGAGAGGCACAGAACCATGGAAGATGTaGGCTGGCTGGAGACCATCG +
Preference number: 4 (lower is better)
Translates to: TVMNEAKKLKGDETLRGTEPWKM*AGWRPS
Trigger: CGATGGTCTCCAGCCAGCCCACATCTTCCATGGTTC...TGTGCCTCTCAGGGTTTCATCTCCTTTCAGCTTCTTTGCCTCATTCATCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp TGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGCATGCTCGTTTTGGATaGTACAGCGATACACACCAC +
Preference number: 4 (lower is better)
Translates to: WWVGCRVRIEGALRQRDKHARFG*YSDTHH
Trigger: GTGGTGTGTATCGCTGTACCATCCAAAACGAGCATG...CTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp AGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTACAGAGAGGTCTCACTGCTaGGTCCGAACACAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SRIKSKWLEVGRKISFSTERSHC*VRTQAG
Trigger: GCCTGCTTGTGTTCGGACCCAGCAGTGAGACCTCTC...TGTAGAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp CCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTTAGAGCTCCCATCTTaGACAGGAGGCTGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: PEQDQEQMVGGRQKDILLLELPS*TGGCPS
Trigger: ACTGGGACAGCCTCCTGTCCAAGATGGGAGCTCTAA...GAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp AGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTACATCCTGGACCTTGTCTTaGATGCCCAGGACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SRIKSKWLEVGRKISFSTSWTLS*MPRTEA
Trigger: AGCCTCTGTCCTGGGCATTCAAGACAAGGTCCAGGA...TGTAGAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp AAATGTCTCCATCTGGTTCAAGCTGCTTCCTGGTTGGTCTGCTCTCGGGTAGAGCAGCTTCTGCTCTCCTaGTTTAGATTCCTCATCCTT +
Preference number: 4 (lower is better)
Translates to: KCLHLVQAASWLVCSRVEQLLLS*FRFLIL
Trigger: AAGGATGAGGAATCTAAACCAGGAGAGCAGAAGCTG...CTCTACCCGAGAGCAGACCAACCAGGAAGCAGCTTGAACCAGATGGAGACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp AGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTACAGGCATTGCTTCTTCTTaGCAGGGCTCCTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SRIKSKWLEVGRKISFSTGIASS*QGSWVL
Trigger: CAGAACCCAGGAGCCCTGCCAAGAAGAAGCAATGCC...TGTAGAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp ACTGTGATGAATGAGGCAAAGAAGCTGAAAGGAGATGAAACCCTGAGAGGCACACCAGGCCACTGTCTTTaGATCTGGAGACCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: TVMNEAKKLKGDETLRGTPGHCL*IWRPSL
Trigger: GAGACTTGGTCTCCAGATCCAAAGACAGTGGCCTGG...TGTGCCTCTCAGGGTTTCATCTCCTTTCAGCTTCTTTGCCTCATTCATCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp AGCAACAAACAGGACACACAGTCACTGCCTTTATTGCATAGCAAGGGGAGCAGGTCTTGCTCTGACCTTTaGTGTGTTTGTCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SNKQDTQSLPLLHSKGSRSCSDL*CVCPPK
Trigger: TTTGGGAGGACAAACACATCAAAGGTCAGAGCAAGA...CCTGCTCCCCTTGCTATGCAATAAAGGCAGTGACTGTGTGTCCTGTTTGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp AGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTACAGCACTCTGCACTAAGTaGTTGTTCTCCACGCGTTCC +
Preference number: 4 (lower is better)
Translates to: SRIKSKWLEVGRKISFSTALCTK*LFSTRS
Trigger: GGAACGCGTGGAGAACAATCACTTAGTGCAGAGTGC...TGTAGAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp AGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTACATTGAGGACTCAGCTGTaGGCCTTTTCTGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SRIKSKWLEVGRKISFSTLRTQL*AFSASR
Trigger: TCTGCTGGCAGAAAAGGCTCACAGCTGAGTCCTCAA...TGTAGAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp AGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTACACACCTCTCACCTGCCTaGATCTGTCCTACCTGCATA +
Preference number: 4 (lower is better)
Translates to: SRIKSKWLEVGRKISFSTHLSPA*ICPTCI
Trigger: TATGCAGGTAGGACAGATGCAGGCAGGTGAGAGGTG...TGTAGAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp ACTGTGATGAATGAGGCAAAGAAGCTGAAAGGAGATGAAACCCTGAGAGGCACATCCTTAGCTTTCCTTTaGTTGGCCAGAGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: TVMNEAKKLKGDETLRGTSLAFL*LARASC
Trigger: GCAGGAAGCTCTGGCCAAGCAAAGGAAAGCTAAGGA...TGTGCCTCTCAGGGTTTCATCTCCTTTCAGCTTCTTTGCCTCATTCATCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp GTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGCAAAAGCCAGGGAAGGGCCAGCTGCAAAGATTTTaGAGTACTCTCGACTCATGT +
Preference number: 4 (lower is better)
Translates to: VRIEGALRQRDKQKPGKGQLQRF*STLDSC
Trigger: ACATGAGTCGAGAGTACTGCAAAATCTTTGCAGCTG...GCCCTTCCCTGGCTTTTGCTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp AGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTACACGCCCGGGCTTCAGCTaGAAAGATTTTGCAGTACTC +
Preference number: 4 (lower is better)
Translates to: SRIKSKWLEVGRKISFSTRPGFS*KDFAVL
Trigger: GAGTACTGCAAAATCTTTGCAGCTGAAGCCCGGGCG...TGTAGAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR TCA 90 bp TGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGATAGATTCTGAAGTCTaGCTTGAGAGAGAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: WWVGCRVRIEGALRQRDKIDSEV*LEREVV
Trigger: TACTACCTCTCTCTCAAGTCAGACTTCAGAATCTAT...CTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR GCA 90 bp CCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTCTAACTCCAGCTTCTaGTCTCCTGGTTTAGATTCC +
Preference number: 4 (lower is better)
Translates to: PEQDQEQMVGGRQKDILLSNSSF*SPGLDS
Trigger: GGAATCTAAACCAGGAGAGCAGAAGCTGGAGTTAGA...GAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp CCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTTTTCTGAAGAGCACTaGCTCCCTTCTGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PEQDQEQMVGGRQKDILLFSEEH*LPSAFS
Trigger: AGAAAAGGCAGAAGGGAGCCAGTGCTCTTCAGAAAA...GAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp ACTGTGATGAATGAGGCAAAGAAGCTGAAAGGAGATGAAACCCTGAGAGGCACAAAGTCAGATCTTTCTTaGACACAGGGTGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TVMNEAKKLKGDETLRGTKSDLS*TQGASV
Trigger: CACAGAGGCACCCTGTGTCCAAGAAAGATCTGACTT...TGTGCCTCTCAGGGTTTCATCTCCTTTCAGCTTCTTTGCCTCATTCATCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CCA 90 bp ACTGTGATGAATGAGGCAAAGAAGCTGAAAGGAGATGAAACCCTGAGAGGCACATTTTCTGCCAGCAGATaGACTTTTGGAGCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: TVMNEAKKLKGDETLRGTFSASR*TFGAFG
Trigger: GCCAAAGGCTCCAAAAGTCCATCTGCTGGCAGAAAA...TGTGCCTCTCAGGGTTTCATCTCCTTTCAGCTTCTTTGCCTCATTCATCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp CACACCACAGTCCGTGGGAGACGCCTGCACGATGGCCAAAGCCGCTaGCCCCTCGTCCCCTGCACTCCTGTTCACTTCGCCCACTGGGTG +
Preference number: 5 (lower is better)
Translates to: HTTVRGRRLHDGQSR*PLVPCTPVHFAHWV
Trigger: CACCCAGTGGGCGAAGTGAACAGGAGTGCAGGGGACGAGGGGCCAGCGGCTTTGGCCATCGTGCAGGCGTCTCCCACGGACTGTGGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp CACAGGTTCCCGTGCCACCTCCCTCCTCCTGAGCAGAGAACCTGGGAGAGCCAGGCAGCCTCAGGGCCTTaGAGGGGCTTCAGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: HRFPCHLPPPEQRTWESQAASGP*RGFSPS
Trigger: GCTGGGGCTGAAGCCCCTCAAAGGCCCTGAGGCTGC...CTGGCTCTCCCAGGTTCTCTGCTCAGGAGGAGGGAGGTGGCACGGGAACCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp CCAGGGTGCTGGACCCCTGCACAGAAATTCCCTGGGGACCCACACCTGAGCAGGGCTCTGAGCTGCGGCTaGGAACAGGGGTGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: PGCWTPAQKFPGDPHLSRALSCG*EQGWVQ
Trigger: CTGCACCCACCCCTGTTCCAAGCCGCAGCTCAGAGC...CCTGCTCAGGTGTGGGTCCCCAGGGAATTTCTGTGCAGGGGTCCAGCACCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp CCAGGGTGCTGGACCCCTGCACAGAAATTCCCTGGGGACCCACACCTGAGCAGGTGCGTCTCCAGGGTCTaGCTGCCACCTCTCACCTGC +
Preference number: 5 (lower is better)
Translates to: PGCWTPAQKFPGDPHLSRCVSRV*LPPLTC
Trigger: GCAGGTGAGAGGTGGCAGCAAGACCCTGGAGACGCA...CCTGCTCAGGTGTGGGTCCCCAGGGAATTTCTGTGCAGGGGTCCAGCACCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp TCTTCTTCTGCGCCAGGCACCTCTAACATGCTGGCTTTTCGGGCCTaGGTAGGGGACCGTCTCTCCCGCCCTGGAGTCCCTGGTGACCCA +
Preference number: 5 (lower is better)
Translates to: SSSAPGTSNMLAFRA*VGDRLSRPGVPGDP
Trigger: TGGGTCACCAGGGACTCCAGGGCGGGAGAGACGGTCCCCTACCCAGGCCCGAAAAGCCAGCATGTTAGAGGTGCCTGGCGCAGAAGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 90 bp GAACCTCTTCCTCCGGGCCCCCAGAGCCAGTTCCTCGGGTGTAGCTaGAGGGAGACCCGTCAAAGCCTCCCCTGGCATTGCTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: EPLPPGPQSQFLGCS*RETRQSLPWHCFFL
Trigger: CAAGAAGAAGCAATGCCAGGGGAGGCTTTGACGGGTCTCCCTGCAGCTACACCCGAGGAACTGGCTCTGGGGGCCCGGAGGAAGAGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp TCTTCCTGGTGCTTTCTATCCCAGGCCCCCGTGCTACCCGGCCTCTaGGCTGGGTCTGAGCTGGCTGTGTATCCGTGGACTTCTCCCTTC +
Preference number: 5 (lower is better)
Translates to: SSWCFLSQAPVLPGL*AGSELAVYPWTSPF
Trigger: GAAGGGAGAAGTCCACGGATACACAGCCAGCTCAGACCCAGCCCAGAGGCCGGGTAGCACGGGGGCCTGGGATAGAAAGCACCAGGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp CTCCTTGGCACAGGCTCCCTCACTGCTAGTAGCCATGGCTTCTGGTaGGTGACTCTGAGTGGGGGACCCTGGCCCCAATTGCAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: LLGTGSLTASSHGFW*VTLSGGPWPQLQSG
Trigger: CCCACTCTGCAATTGGGGCCAGGGTCCCCCACTCAGAGTCACCCACCAGAAGCCATGGCTACTAGCAGTGAGGGAGCCTGTGCCAAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp TGGTACAGCGATACACACCACAGTCCGTGGGAGACGCCTGCACGATaGCCAAAGCCGCTGGCCCCTCGTCCCCTGCACTCCTGTTCACTT +
Preference number: 5 (lower is better)
Translates to: WYSDTHHSPWETPAR*PKPLAPRPLHSCSL
Trigger: AAGTGAACAGGAGTGCAGGGGACGAGGGGCCAGCGGCTTTGGCCATCGTGCAGGCGTCTCCCACGGACTGTGGTGTGTATCGCTGTACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp AGCCATGCTCGTTTTGGATGGTACAGCGATACACACCACAGTCCGTaGGAGACGCCTGCACGATGGCCAAAGCCGCTGGCCCCTCGTCCC +
Preference number: 5 (lower is better)
Translates to: SHARFGWYSDTHHSP*ETPARWPKPLAPRP
Trigger: GGGACGAGGGGCCAGCGGCTTTGGCCATCGTGCAGGCGTCTCCCACGGACTGTGGTGTGTATCGCTGTACCATCCAAAACGAGCATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp CCAGGGTGCTGGACCCCTGCACAGAAATTCCCTGGGGACCCACACCTGAGCAGGGTTCCGGGCAGAGGCTaGGTAGATGGCAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: PGCWTPAQKFPGDPHLSRVPGRG*VDGSIF
Trigger: GAAGATGCTGCCATCTACCAAGCCTCTGCCCGGAAC...CCTGCTCAGGTGTGGGTCCCCAGGGAATTTCTGTGCAGGGGTCCAGCACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp GCCCCAGTAGCTGTTCACAGGTTCCCGTGCCACCTCCCTCCTCCTGAGCAGAGACAGTCGGCGCTTTCTTaGGAAGCGGTCGGGGCTGAT +
Preference number: 5 (lower is better)
Translates to: APVAVHRFPCHLPPPEQRQSALS*EAVGAD
Trigger: ATCAGCCCCGACCGCTTCCAAAGAAAGCGCCGACTG...TCTCTGCTCAGGAGGAGGGAGGTGGCACGGGAACCTGTGAACAGCTACTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp CAGAGTGCAGAACTCATGCAGAGGACTCAGGAGCCCCCAGCAGTGGCAAGTGTAGGAGCAGGCTCCCCATaGGTGGGCGCCTCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: QSAELMQRTQEPPAVASVGAGSP*VGASPG
Trigger: TCCTGGAGAGGCGCCCACCAATGGGGAGCCTGCTCC...TACACTTGCCACTGCTGGGGGCTCCTGAGTCCTCTGCATGAGTTCTGCACTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp CTGGGATGGGGGACGGGCGTGTGTGCAAGGCAGCATGGGAAACAAGTAAGTGCATGGTGGGAGCCACGGTaGCTGGGGACTCCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: LGWGTGVCARQHGKQVSAWWEPR*LGTPEP
Trigger: AGGCTCTGGAGTCCCCAGCAACCGTGGCTCCCACCA...TGCACTTACTTGTTTCCCATGCTGCCTTGCACACACGCCCGTCCCCCATCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 90 bp GCCCGGGTGGTCTCCATGAACATGTCCTTCAGGGAGAAATACACCTaGTCTGAGCTGCGGCTTGGAACAGGGGTGGGTGCAGGGACTGGG +
Preference number: 5 (lower is better)
Translates to: ARVVSMNMSFREKYT*SELRLGTGVGAGTG
Trigger: CCCAGTCCCTGCACCCACCCCTGTTCCAAGCCGCAGCTCAGAGCAGGTGTATTTCTCCCTGAAGGACATGTTCATGGAGACCACCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 90 bp GTCCGTCGGTGCCTTCTCACCTGCCTGTGTCCTTGGCGAAGCGTGTaGTCTGTCTTGTGCTCCGTCTCCCTGAGTCCTCCCATCCACTTG +
Preference number: 5 (lower is better)
Translates to: VRRCLLTCLCPWRSV*SVLCSVSLSPPIHL
Trigger: CAAGTGGATGGGAGGACTCAGGGAGACGGAGCACAAGACAGAGCACACGCTTCGCCAAGGACACAGGCAGGTGAGAAGGCACCGACGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp TATCCCAGGCCCCCGTGCTACCCGGCCTCTGGGCTGGGTCTGAGCTaGCTGTGTATCCGTGGACTTCTCCCTTCTACTGGAGTTGGGTTT +
Preference number: 5 (lower is better)
Translates to: YPRPPCYPASGLGLS*LCIRGLLPSTGVGF
Trigger: AAACCCAACTCCAGTAGAAGGGAGAAGTCCACGGATACACAGCCAGCTCAGACCCAGCCCAGAGGCCGGGTAGCACGGGGGCCTGGGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp TGTGCAGAGAAGCTGCGGTGCCTGGTAGCTCCTCCTGCAGACTACTaGTTAGGCCCGTCCCAGGAAGAGAAGGCATGGCAGGCACCTCCT +
Preference number: 5 (lower is better)
Translates to: CAEKLRCLVAPPADY*LGPSQEEKAWQAPP
Trigger: AGGAGGTGCCTGCCATGCCTTCTCTTCCTGGGACGGGCCTAACCAGTAGTCTGCAGGAGGAGCTACCAGGCACCGCAGCTTCTCTGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp TGGCTCCTTGGCACAGGCTCCCTCACTGCTAGTAGCCATGGCTTCTaGTGGGTGACTCTGAGTGGGGGACCCTGGCCCCAATTGCAGAGT +
Preference number: 5 (lower is better)
Translates to: WLLGTGSLTASSHGF*WVTLSGGPWPQLQS
Trigger: ACTCTGCAATTGGGGCCAGGGTCCCCCACTCAGAGTCACCCACCAGAAGCCATGGCTACTAGCAGTGAGGGAGCCTGTGCCAAGGAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp TCCAGGTCTCAGGAGGGGTATCTAGAAAGGGCCCAGGGTGCTGGACCCCTGCACGGGGGACATCTGTGTTaGTGTGCAGAGAAGCTGCGG +
Preference number: 5 (lower is better)
Translates to: SRSQEGYLERAQGAGPLHGGHLC*CAEKLR
Trigger: CCGCAGCTTCTCTGCACACAAACACAGATGTCCCCC...GTGCAGGGGTCCAGCACCCTGGGCCCTTTCTAGATACCCCTCCTGAGACCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp TCCAGGTCTCAGGAGGGGTATCTAGAAAGGGCCCAGGGTGCTGGACCCCTGCACCGGCCCTGGCTTCACTaGTCTCTGGACTGGATAGCT +
Preference number: 5 (lower is better)
Translates to: SRSQEGYLERAQGAGPLHRPWLH*SLDWIA
Trigger: AGCTATCCAGTCCAGAGACAAGTGAAGCCAGGGCCG...GTGCAGGGGTCCAGCACCCTGGGCCCTTTCTAGATACCCCTCCTGAGACCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 90 bp CCCAGGAAGAGAAGGCATGGCAGGCACCTCCTGACTCAAGCCAGTTaGATGCCCACCAGAGAGACCCACATGAAGCGGTTCCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: PRKRRHGRHLLTQAS*MPTRETHMKRFLGL
Trigger: CAGCCCCAGGAACCGCTTCATGTGGGTCTCTCTGGTGGGCATTCAACTGGCTTGAGTCAGGAGGTGCCTGCCATGCCTTCTCTTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 90 bp AACCGTGGGGCTCTCCCTTTCTTCAGCCTTGTTTGCCTCTCCATCTaGCCCTGCTCTGACCTTAGGGAGGAACCTCTTCCTCCGGGCCCC +
Preference number: 5 (lower is better)
Translates to: NRGALPFFSLVCLSI*PCSDLREEPLPPGP
Trigger: GGGGCCCGGAGGAAGAGGTTCCTCCCTAAGGTCAGAGCAGGGTCAGATGGAGAGGCAAACAAGGCTGAAGAAAGGGAGAGCCCCACGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp TGTCGTGATCAACAGAGACGGTATCGGAGCTGCTGTTGGCAGACTTaGTGGGAGCCACGGTTGCTGGGGACTCCAGAGCCTCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: CRDQQRRYRSCCWQT*WEPRLLGTPEPLLE
Trigger: CTCCAGGAGAGGCTCTGGAGTCCCCAGCAACCGTGGCTCCCACCAAGTCTGCCAACAGCAGCTCCGATACCGTCTCTGTTGATCACGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp GCTAGTAGCCATGGCTTCTGGTGGGTGACTCTGAGTGGGGGACCCTaGCCCCAATTGCAGAGTGGGAGCAGAACTCGGAAAGTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: ASSHGFWWVTLSGGP*PQLQSGSRTRKVLV
Trigger: GACCAGGACTTTCCGAGTTCTGCTCCCACTCTGCAATTGGGGCCAGGGTCCCCCACTCAGAGTCACCCACCAGAAGCCATGGCTACTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp CAGTTCCTCGGGTGTAGCTGCAGGGAGACCCGTCAAAGCCTCCCCTaGCATTGCTTCTTCTTGGCAGGGCTCCTGGGTTCTGCTTTCCAC +
Preference number: 5 (lower is better)
Translates to: QFLGCSCRETRQSLP*HCFFLAGLLGSAFH
Trigger: GTGGAAAGCAGAACCCAGGAGCCCTGCCAAGAAGAAGCAATGCCAGGGGAGGCTTTGACGGGTCTCCCTGCAGCTACACCCGAGGAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp TCGGGGCTGAGGCAGAAGTCAGTGGACGCTGAGCCATGCTCGTTTTaGATGGTACAGCGATACACACCACAGTCCGTGGGAGACGCCTGC +
Preference number: 5 (lower is better)
Translates to: SGLRQKSVDAEPCSF*MVQRYTPQSVGDAC
Trigger: GCAGGCGTCTCCCACGGACTGTGGTGTGTATCGCTGTACCATCCAAAACGAGCATGGCTCAGCGTCCACTGACTTCTGCCTCAGCCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp TCCAGGTCTCAGGAGGGGTATCTAGAAAGGGCCCAGGGTGCTGGACCCCTGCACATCCTGGACCTTGTCTaGAATGCCCAGGACAGAGGC +
Preference number: 5 (lower is better)
Translates to: SRSQEGYLERAQGAGPLHILDLV*NAQDRG
Trigger: GCCTCTGTCCTGGGCATTCAAGACAAGGTCCAGGAT...GTGCAGGGGTCCAGCACCCTGGGCCCTTTCTAGATACCCCTCCTGAGACCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 90 bp GCCTCTCCAGGAGCAAAACTGTTGATCAAACCCAACCCCGGGTGCTaGGCAGACTCAGTCTCTCCTTCCTGCCAAGCCGCTGAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: ASPGAKLLIKPNPGC*ADSVSPSCQAAEEP
Trigger: AGGCTCCTCAGCGGCTTGGCAGGAAGGAGAGACTGAGTCTGCTCAGCACCCGGGGTTGGGTTTGATCAACAGTTTTGCTCCTGGAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 90 bp GGTGGTCTCCATGAACATGTCCTTCAGGGAGAAATACACCTGCTCTaGGCTGCGGCTTGGAACAGGGGTGGGTGCAGGGACTGGGACAGG +
Preference number: 5 (lower is better)
Translates to: GGLHEHVLQGEIHLL*AAAWNRGGCRDWDR
Trigger: CCTGTCCCAGTCCCTGCACCCACCCCTGTTCCAAGCCGCAGCTCAGAGCAGGTGTATTTCTCCCTGAAGGACATGTTCATGGAGACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 90 bp GAGGTGCAGGGGCTCAGCAACAGGGTCTGTGCACTCTGCACTAAGTaGTTGTTCTCCACGCGTTCCAGGATTCGCCTCGACGTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: EVQGLSNRVCALCTK*LFSTRSRIRLDVLG
Trigger: TCCCAGGACGTCGAGGCGAATCCTGGAACGCGTGGAGAACAATCACTTAGTGCAGAGTGCACAGACCCTGTTGCTGAGCCCCTGCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp GTGCTACCCGGCCTCTGGGCTGGGTCTGAGCTGGCTGTGTATCCGTaGACTTCTCCCTTCTACTGGAGTTGGGTTTGTCTGTACTGGGGA +
Preference number: 5 (lower is better)
Translates to: VLPGLWAGSELAVYP*TSPFYWSWVCLYWG
Trigger: TCCCCAGTACAGACAAACCCAACTCCAGTAGAAGGGAGAAGTCCACGGATACACAGCCAGCTCAGACCCAGCCCAGAGGCCGGGTAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp TTGTGTCACAACGTCCGTCGGTGCCTTCTCACCTGCCTGTGTCCTTaGCGAAGCGTGTGCTCTGTCTTGTGCTCCGTCTCCCTGAGTCCT +
Preference number: 5 (lower is better)
Translates to: LCHNVRRCLLTCLCP*RSVCSVLCSVSLSP
Trigger: AGGACTCAGGGAGACGGAGCACAAGACAGAGCACACGCTTCGCCAAGGACACAGGCAGGTGAGAAGGCACCGACGGACGTTGTGACACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp CCTCCTGCAGACTACTGGTTAGGCCCGTCCCAGGAAGAGAAGGCATaGCAGGCACCTCCTGACTCAAGCCAGTTGAATGCCCACCAGAGA +
Preference number: 5 (lower is better)
Translates to: PPADYWLGPSQEEKA*QAPPDSSQLNAHQR
Trigger: TCTCTGGTGGGCATTCAACTGGCTTGAGTCAGGAGGTGCCTGCCATGCCTTCTCTTCCTGGGACGGGCCTAACCAGTAGTCTGCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp ACCAGAGTAGAGGAGGAGGTTAAGCCCCCGGTGTCTGCCACTTCCTaGGACTCGGCCCTGGCTTCACTTGTCTCTGGACTGGATAGCTTC +
Preference number: 5 (lower is better)
Translates to: TRVEEEVKPPVSATS*DSALASLVSGLDSF
Trigger: GAAGCTATCCAGTCCAGAGACAAGTGAAGCCAGGGCCGAGTCCCAGGAAGTGGCAGACACCGGGGGCTTAACCTCCTCCTCTACTCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp GTGAATGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAAGTGCTGCTGTTGGCAGACTaGGTGGGAGCCACGGTTGCT +
Preference number: 5 (lower is better)
Translates to: VNGSKPSRNTLCLLFPQVLLLAD*VGATVA
Trigger: AGCAACCGTGGCTCCCACCAAGTCTGCCAACAGCAG...CACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp AAGGGGTCAGAGTGCAGAACTCATGCAGAGGACTCAGGAGCCCCCAGCAGTGGCCCTGACTCAAGCCAGTaGAATGCCCACCAGAGAGAC +
Preference number: 5 (lower is better)
Translates to: KGSECRTHAEDSGAPSSGPDSSQ*NAHQRD
Trigger: GTCTCTCTGGTGGGCATTCAACTGGCTTGAGTCAGG...GCCACTGCTGGGGGCTCCTGAGTCCTCTGCATGAGTTCTGCACTCTGACCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp CACAGGTTCCCGTGCCACCTCCCTCCTCCTGAGCAGAGAACCTGGGAGAGCCAGCAAGAAAGCTGCCGTTaGTCCACTGATACAGCCAGT +
Preference number: 5 (lower is better)
Translates to: HRFPCHLPPPEQRTWESQQESCR*STDTAS
Trigger: ACTGGCTGTATCAGTGGACAAACGGCAGCTTTCTTG...CTGGCTCTCCCAGGTTCTCTGCTCAGGAGGAGGGAGGTGGCACGGGAACCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 90 bp CTTCTCACCTGCCTGTGTCCTTGGCGAAGCGTGTGCTCTGTCTTGTaGTCCGTCTCCCTGAGTCCTCCCATCCACTTGCAGCTTTCCATC +
Preference number: 5 (lower is better)
Translates to: LLTCLCPWRSVCSVL*SVSLSPPIHLQLSI
Trigger: GATGGAAAGCTGCAAGTGGATGGGAGGACTCAGGGAGACGGAGCACAAGACAGAGCACACGCTTCGCCAAGGACACAGGCAGGTGAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 90 bp TCTGTGTTTGTGTGCAGAGAAGCTGCGGTGCCTGGTAGCTCCTCCTaGAGACTACTGGTTAGGCCCGTCCCAGGAAGAGAAGGCATGGCA +
Preference number: 5 (lower is better)
Translates to: SVFVCREAAVPGSSS*RLLVRPVPGREGMA
Trigger: TGCCATGCCTTCTCTTCCTGGGACGGGCCTAACCAGTAGTCTGCAGGAGGAGCTACCAGGCACCGCAGCTTCTCTGCACACAAACACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp CTTCATCCACCGCAGGCTCTGAGTCCAGGCCACTGTCTTTGGATCTaGAGACCAAGTCTCCAGTTGCAGGCTCTTCTTCTGCGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: LHPPQALSPGHCLWI*RPSLQLQALLLRQA
Trigger: TGCCTGGCGCAGAAGAAGAGCCTGCAACTGGAGACTTGGTCTCCAGATCCAAAGACAGTGGCCTGGACTCAGAGCCTGCGGTGGATGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp GGTTGCATATGGTATATTGTTTGCAGGCCGGTAGATCAAGTAGAGTaGGATGATCTCGGGCACCTCTCCGAAGCCAGAGGCCGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: GCIWYIVCRPVDQVE*DDLGHLSEARGRPG
Trigger: GCCCGGGCGGCCTCTGGCTTCGGAGAGGTGCCCGAGATCATCCCACTCTACTTGATCTACCGGCCTGCAAACAATATACCATATGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp ATTCCCTGGGGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGGTATCGGAGCTGCTGTaGGCAGACTTGGTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: IPWGPTPEQDQEQMVGGRVSELL*ADLVGA
Trigger: GGCTCCCACCAAGTCTGCCAACAGCAGCTCCGATAC...CCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCCCCAGGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp GTGAATGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAAGTGAGCGTGTGCTCTGTCTaGTGCTCCGTCTCCCTGAGT +
Preference number: 5 (lower is better)
Translates to: VNGSKPSRNTLCLLFPQVSVCSV*CSVSLS
Trigger: ACTCAGGGAGACGGAGCACAAGACAGAGCACACGCT...CACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp TGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAAGTGAGTCCCCTGATGGTGAGCCTTaGAGAGCTCCAGGAAGTGAG +
Preference number: 5 (lower is better)
Translates to: WIETLQEHPVPPLPPSESPDGEP*RAPGSE
Trigger: CTCACTTCCTGGAGCTCTCAAAGGCTCACCATCAGG...GGACTCACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp AAATGTCTCCATCTGGTTCAAGCTGCTTCCTGGTTGGTCTGCTCTCGGGTAGAGGCCTTTGGCCTTGGCTaGAGGGTGGGCAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: KCLHLVQAASWLVCSRVEAFGLG*RVGSLR
Trigger: CCTGAGGCTGCCCACCCTCAAGCCAAGGCCAAAGGC...CTCTACCCGAGAGCAGACCAACCAGGAAGCAGCTTGAACCAGATGGAGACATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp CAGAGTGCAGAACTCATGCAGAGGACTCAGGAGCCCCCAGCAGTGGCAAGTGTACTTAGAGCTCCCATCTaGGACAGGAGGCTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: QSAELMQRTQEPPAVASVLRAPI*DRRLSQ
Trigger: CTGGGACAGCCTCCTGTCCAAGATGGGAGCTCTAAG...TACACTTGCCACTGCTGGGGGCTCCTGAGTCCTCTGCATGAGTTCTGCACTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 90 bp ATCTTGGCTGCAGCCTTGCGCTTCAACTTGGCGAACCAGCGCTGGTaGATCTTGTACTCCGTCATAGTGCCCACCTCTAGGACCCCTGAG +
Preference number: 5 (lower is better)
Translates to: ILAAALRFNLANQRW*ILYSVIVPTSRTPE
Trigger: CTCAGGGGTCCTAGAGGTGGGCACTATGACGGAGTACAAGATTCACCAGCGCTGGTTCGCCAAGTTGAAGCGCAAGGCTGCAGCCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 90 bp GAAGCCGGACAATACCTCGGGGCTGAGGCAGAAGTCAGTGGACGCTaGGCCATGCTCGTTTTGGATGGTACAGCGATACACACCACAGTC +
Preference number: 5 (lower is better)
Translates to: EAGQYLGAEAEVSGR*AMLVLDGTAIHTTV
Trigger: GACTGTGGTGTGTATCGCTGTACCATCCAAAACGAGCATGGCTCAGCGTCCACTGACTTCTGCCTCAGCCCCGAGGTATTGTCCGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 90 bp GACAATACCTCGGGGCTGAGGCAGAAGTCAGTGGACGCTGAGCCATaGTCGTTTTGGATGGTACAGCGATACACACCACAGTCCGTGGGA +
Preference number: 5 (lower is better)
Translates to: DNTSGLRQKSVDAEP*SFWMVQRYTPQSVG
Trigger: TCCCACGGACTGTGGTGTGTATCGCTGTACCATCCAAAACGAGCATGGCTCAGCGTCCACTGACTTCTGCCTCAGCCCCGAGGTATTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 90 bp GATCTCGGGCACCTCTCCGAAGCCAGAGGCCGCCCGGGCTTCAGCTaGAAAGATTTTGCAGTACTCTCGACTCATGTTCTGGATCTTGCA +
Preference number: 5 (lower is better)
Translates to: DLGHLSEARGRPGFS*KDFAVLSTHVLDLA
Trigger: TGCAAGATCCAGAACATGAGTCGAGAGTACTGCAAAATCTTTGCAGCTGAAGCCCGGGCGGCCTCTGGCTTCGGAGAGGTGCCCGAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp GGGCTGGCTGGAGACCATCGGTACCTTCTCCAGTCTAGACTTGACTaGTGTCTTTCCTGGGGGACTTTCTCCAGCTACCCTGGTACTTGG +
Preference number: 5 (lower is better)
Translates to: GLAGDHRYLLQSRLD*CLSWGTFSSYPGTW
Trigger: CCAAGTACCAGGGTAGCTGGAGAAAGTCCCCCAGGAAAGACACCAGTCAAGTCTAGACTGGAGAAGGTACCGATGGTCTCCAGCCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp AGGCTGTTCCTTGCCCATACGCTGGTGGGTAGGATGCAGGGTCAGGATAGAAGGATCTTGGCTGCAGCCTaGCGCTTCAACTTGGCGAAC +
Preference number: 5 (lower is better)
Translates to: RLFLAHTLVGRMQGQDRRILAAA*RFNLAN
Trigger: GTTCGCCAAGTTGAAGCGCAAGGCTGCAGCCAAGAT...CCTTCTATCCTGACCCTGCATCCTACCCACCAGCGTATGGGCAAGGAACAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp AGGCTGTTCCTTGCCCATACGCTGGTGGGTAGGATGCAGGGTCAGGATAGAAGGCTTCCTCCTGTATCCTaGCGTCTCCAGGGTCTTGCT +
Preference number: 5 (lower is better)
Translates to: RLFLAHTLVGRMQGQDRRLPPVS*RLQGLA
Trigger: AGCAAGACCCTGGAGACGCAAGGATACAGGAGGAAG...CCTTCTATCCTGACCCTGCATCCTACCCACCAGCGTATGGGCAAGGAACAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp GTGAATGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAAGTGTGGCATTGCTTCTTCTaGGCAGGGCTCCTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: VNGSKPSRNTLCLLFPQVWHCFF*AGLLGS
Trigger: AGAACCCAGGAGCCCTGCCAAGAAGAAGCAATGCCA...CACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp AAGGGGTCAGAGTGCAGAACTCATGCAGAGGACTCAGGAGCCCCCAGCAGTGGCTCCCTTTCTTCAGCCTaGTTTGCCTCTCCATCTGAC +
Preference number: 5 (lower is better)
Translates to: KGSECRTHAEDSGAPSSGSLSSA*FASPSD
Trigger: GTCAGATGGAGAGGCAAACAAGGCTGAAGAAAGGGA...GCCACTGCTGGGGGCTCCTGAGTCCTCTGCATGAGTTCTGCACTCTGACCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp CTCCAGACCCTACTCCATTCCAGGTCTCAGGAGGGGTATCTAGAAAGGGCCCAGAGACCAAGTCTCCAGTaGCAGGCTCTTCTTCTGCGC +
Preference number: 5 (lower is better)
Translates to: LQTLLHSRSQEGYLERAQRPSLQ*QALLLR
Trigger: GCGCAGAAGAAGAGCCTGCAACTGGAGACTTGGTCT...CTGGGCCCTTTCTAGATACCCCTCCTGAGACCTGGAATGGAGTAGGGTCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp TGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAAGTGAGTCCTCCAGGCCACTGTCTTaGGATCTGGAGACCAAGTCT +
Preference number: 5 (lower is better)
Translates to: WIETLQEHPVPPLPPSESSRPLS*DLETKS
Trigger: AGACTTGGTCTCCAGATCCAAAGACAGTGGCCTGGA...GGACTCACTTGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp GCGTGTGAATGGATCGAAACCCTCCAGGAACACCCTGTGCCTCCTCTTCCCCCAGCTCTCCTTGAGGCCTaGGTATCCTCGAAGTTTGGT +
Preference number: 5 (lower is better)
Translates to: ACEWIETLQEHPVPPLPPALLEA*VSSKFG
Trigger: ACCAAACTTCGAGGATACCAAGGCCTCAAGGAGAGC...TGGGGGAAGAGGAGGCACAGGGTGTTCCTGGAGGGTTTCGATCCATTCACACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp TCAGGAGGGGTATCTAGAAAGGGCCCAGGGTGCTGGACCCCTGCACAGAAATTCCCAGCAGATGGACTTTaGGAGCCTTTGGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: SGGVSRKGPGCWTPAQKFPADGL*EPLALA
Trigger: AGCCAAGGCCAAAGGCTCCAAAAGTCCATCTGCTGG...GAATTTCTGTGCAGGGGTCCAGCACCCTGGGCCCTTTCTAGATACCCCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 90 bp GGCCCCTCGTCCCCTGCACTCCTGTTCACTTCGCCCACTGGGTGCTaGTCCTTCGCCCATGTCAAGACTGAGTCACTAACAATGTTGAAA +
Preference number: 5 (lower is better)
Translates to: GPSSPALLFTSPTGC*SFAHVKTESLTMLK
Trigger: TTTCAACATTGTTAGTGACTCAGTCTTGACATGGGCGAAGGATCAGCACCCAGTGGGCGAAGTGAACAGGAGTGCAGGGGACGAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 90 bp CTCCTGTATCCTTGCGTCTCCAGGGTCTTGCTGCCACCTCTCACCTaGCTGCATCTGTCCTACCTGCATATCCACTCTTCTCTGTGTCAC +
Preference number: 5 (lower is better)
Translates to: LLYPCVSRVLLPPLT*LHLSYLHIHSSLCH
Trigger: GTGACACAGAGAAGAGTGGATATGCAGGTAGGACAGATGCAGGCAGGTGAGAGGTGGCAGCAAGACCCTGGAGACGCAAGGATACAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 90 bp ATTGCTTCTTCTTGGCAGGGCTCCTGGGTTCTGCTTTCCACTGTGTaGCCCTCCACTTCCCCTAGCAGTCCCTTCTTGTCACTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: IASSWQGSWVLLSTV*PSTSPSSPFLSLSC
Trigger: GCAGGAAAGTGACAAGAAGGGACTGCTAGGGGAAGTGGAGGGGCACACAGTGGAAAGCAGAACCCAGGAGCCCTGCCAAGAAGAAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp GCTCCAGGAAGTGAGCTGAGGCTGGCCATGGACAACTGCTCTGATTaGGTTTCGAAAGCTACAGGAATGCTGCCTGCTGCTGACTGTGTC +
Preference number: 5 (lower is better)
Translates to: APGSELRLAMDNCSD*VSKATGMLPAADCV
Trigger: GACACAGTCAGCAGCAGGCAGCATTCCTGTAGCTTTCGAAACCCAATCAGAGCAGTTGTCCATGGCCAGCCTCAGCTCACTTCCTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp GTGAAACTACTCAGAGAGGTCCCAAAGGCATGCCTCCTCTGGGCACCTTCTCTGCCAGGAGCAAAACTGTaGATCAAACCCAACCCCGGG +
Preference number: 5 (lower is better)
Translates to: VKLLREVPKACLLWAPSLPGAKL*IKPNPG
Trigger: CCCGGGGTTGGGTTTGATCAACAGTTTTGCTCCTGG...CAGAGAAGGTGCCCAGAGGAGGCATGCCTTTGGGACCTCTCTGAGTAGTTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp CCAGGGTGCTGGACCCCTGCACAGAAATTCCCTGGGGACCCACACCTGAGCAGGGAGTCACTAACAATGTaGAAAAACTGGCACCAAAGC +
Preference number: 5 (lower is better)
Translates to: PGCWTPAQKFPGDPHLSRESLTM*KNWHQS
Trigger: GCTTTGGTGCCAGTTTTTCAACATTGTTAGTGACTC...CCTGCTCAGGTGTGGGTCCCCAGGGAATTTCTGTGCAGGGGTCCAGCACCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp GTGAAACTACTCAGAGAGGTCCCAAAGGCATGCCTCCTCTGGGCACCTTCTCTGAGCAGGCTGGATACTTaGATGATGCACGTGCGGCCA +
Preference number: 5 (lower is better)
Translates to: VKLLREVPKACLLWAPSLSRLDT*MMHVRP
Trigger: TGGCCGCACGTGCATCATCAAAGTATCCAGCCTGCT...CAGAGAAGGTGCCCAGAGGAGGCATGCCTTTGGGACCTCTCTGAGTAGTTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 90 bp CCTTTGAGAGCTCCAGGAAGTGAGCTGAGGCTGGCCATGGACAACTaGTCTGATTGGGTTTCGAAAGCTACAGGAATGCTGCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: PLRAPGSELRLAMDN*SDWVSKATGMLPAA
Trigger: AGCAGCAGGCAGCATTCCTGTAGCTTTCGAAACCCAATCAGAGCAGTTGTCCATGGCCAGCCTCAGCTCACTTCCTGGAGCTCTCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp GGGCAAAAAGGTAAATGCTGGCCTGCTGGCCCCAGAGTGCAACACTTACTTGTGTCAATCTCCCTCATCTaGGCTGCAGCCTTGCGCTTC +
Preference number: 5 (lower is better)
Translates to: GQKGKCWPAGPRVQHLLVSISLI*AAALRF
Trigger: GAAGCGCAAGGCTGCAGCCAAGATGAGGGAGATTGA...CACAAGTAAGTGTTGCACTCTGGGGCCAGCAGGCCAGCATTTACCTTTTTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp GTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGCAAAAGCCAGGGAAGGGCTCCACATTTGGCTCCTaGGCACAGGCTCCCTCACTG +
Preference number: 5 (lower is better)
Translates to: VRIEGALRQRDKQKPGKGSTFGS*AQAPSL
Trigger: CAGTGAGGGAGCCTGTGCCAAGGAGCCAAATGTGGA...GCCCTTCCCTGGCTTTTGCTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp TGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGAAGCCTCCCCTGGCATaGCTTCTTCTTGGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: WWVGCRVRIEGALRQRDKKPPLA*LLLGRA
Trigger: AGCCCTGCCAAGAAGAAGCAATGCCAGGGGAGGCTT...CTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp TTCCTTGCCCATACGCTGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTTTAGCTTTCCTTTGCTaGGCCAGAGCTTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: FLAHTLVGRMQGQDRRSPLAFLC*ARASCL
Trigger: CAAGCAGGAAGCTCTGGCCAAGCAAAGGAAAGCTAA...AGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCAGCGTATGGGCAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 90 bp CTCTTTTCCATGCTTCCAGCTCTGCTCAATCTCCCTCATCTTGGCTaGAGCCTTGCGCTTCAACTTGGCGAACCAGCGCTGGTGAATCTT +
Preference number: 5 (lower is better)
Translates to: LFSMLPALLNLPHLG*SLALQLGEPALVNL
Trigger: AAGATTCACCAGCGCTGGTTCGCCAAGTTGAAGCGCAAGGCTGCAGCCAAGATGAGGGAGATTGAGCAGAGCTGGAAGCATGGAAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 90 bp GTCTCTTTTTCTTCCTCCTGTATCCTTGCGTCTCCAGGGTCTTGCTaGCACCTCTCACCTGCCTGCATCTGTCCTACCTGCATATCCACT +
Preference number: 5 (lower is better)
Translates to: VSFSSSCILASPGSC*HLSPACICPTCIST
Trigger: AGTGGATATGCAGGTAGGACAGATGCAGGCAGGTGAGAGGTGGCAGCAAGACCCTGGAGACGCAAGGATACAGGAGGAAGAAAAAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 90 bp TGTGTCTCTTTTTCTTCCTCCTGTATCCTTGCGTCTCCAGGGTCTTaGTGCCACCTCTCACCTGCCTGCATCTGTCCTACCTGCATATCC +
Preference number: 5 (lower is better)
Translates to: CVSFSSSCILASPGS*CHLSPACICPTCIS
Trigger: GGATATGCAGGTAGGACAGATGCAGGCAGGTGAGAGGTGGCAGCAAGACCCTGGAGACGCAAGGATACAGGAGGAAGAAAAAGAGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 90 bp GGGCTTGCCCAGATCTTCCTCCAGGGTTGCATATGGTATATTGTTTaGAGGCCGGTAGATCAAGTAGAGTGGGATGATCTCGGGCACCTC +
Preference number: 5 (lower is better)
Translates to: GLAQIFLQGCIWYIV*RPVDQVEWDDLGHL
Trigger: GAGGTGCCCGAGATCATCCCACTCTACTTGATCTACCGGCCTGCAAACAATATACCATATGCAACCCTGGAGGAAGATCTGGGCAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp TCTGAGCTGGCTGTGTATCCGTGGACTTCTCCCTTCTACTGGAGTTaGGTTTGTCTGTACTGGGGACGACGTTTTCTGAAGAGCACTGGC +
Preference number: 5 (lower is better)
Translates to: SELAVYPWTSPFYWS*VCLYWGRRFLKSTG
Trigger: GCCAGTGCTCTTCAGAAAACGTCGTCCCCAGTACAGACAAACCCAACTCCAGTAGAAGGGAGAAGTCCACGGATACACAGCCAGCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp GACCATCGGTACCTTCTCCAGTCTAGACTTGACTGGTGTCTTTCCTaGGGGACTTTCTCCAGCTACCCTGGTACTTGGAGGTGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: DHRYLLQSRLDWCLS*GTFSSYPGTWRWRF
Trigger: AAACCTCCACCTCCAAGTACCAGGGTAGCTGGAGAAAGTCCCCCAGGAAAGACACCAGTCAAGTCTAGACTGGAGAAGGTACCGATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp CTGCCACTTCCTGGGACTCGGCCCTGGCTTCACTTGTCTCTGGACTaGATAGCTTCAGCAGCAGAAGCAAGTAGTTCTTCAGGGAATCTA +
Preference number: 5 (lower is better)
Translates to: LPLPGTRPWLHLSLD*IASAAEASSSSGNL
Trigger: TAGATTCCCTGAAGAACTACTTGCTTCTGCTGCTGAAGCTATCCAGTCCAGAGACAAGTGAAGCCAGGGCCGAGTCCCAGGAAGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp TCAGGAGGGGTATCTAGAAAGGGCCCAGGGTGCTGGACCCCTGCACAGAAATTCGGTGTGACGGTTGCCTaGATGAGTGATCTCGTATTT +
Preference number: 5 (lower is better)
Translates to: SGGVSRKGPGCWTPAQKFGVTVA*MSDLVF
Trigger: AAATACGAGATCACTCATCAAGGCAACCGTCACACC...GAATTTCTGTGCAGGGGTCCAGCACCCTGGGCCCTTTCTAGATACCCCTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 90 bp CCAGGGTCTTGCTGCCACCTCTCACCTGCCTGCATCTGTCCTACCTaGATATCCACTCTTCTCTGTGTCACCAAATTCTTCCATGAACTC +
Preference number: 5 (lower is better)
Translates to: PGSCCHLSPACICPT*ISTLLCVTKFFHEL
Trigger: GAGTTCATGGAAGAATTTGGTGACACAGAGAAGAGTGGATATGCAGGTAGGACAGATGCAGGCAGGTGAGAGGTGGCAGCAAGACCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp TGGACACAGGGTGCCTCTGTGCTCTTCTCAAAACATTCTATAGCCTaGGACTCTCTAGGGCATCCTGATGGTGAGCCTTTGAGAGCTCCA +
Preference number: 5 (lower is better)
Translates to: WTQGASVLFSKHSIA*DSLGHPDGEPLRAP
Trigger: TGGAGCTCTCAAAGGCTCACCATCAGGATGCCCTAGAGAGTCCCAGGCTATAGAATGTTTTGAGAAGAGCACAGAGGCACCCTGTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp GGGCAAAAAGGTAAATGCTGGCCTGCTGGCCCCAGAGTGCAACACTTACTTGTGAGTTCTATGTCATCCTaGTACCAGGTCACCTCTGGC +
Preference number: 5 (lower is better)
Translates to: GQKGKCWPAGPRVQHLLVSSMSS*YQVTSG
Trigger: GCCAGAGGTGACCTGGTACAAGGATGACATAGAACT...CACAAGTAAGTGTTGCACTCTGGGGCCAGCAGGCCAGCATTTACCTTTTTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp AGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTACAGGGCTCCGTGGCCCCTaGATTTCCAGAGCTGTCGTG +
Preference number: 5 (lower is better)
Translates to: SRIKSKWLEVGRKISFSTGLRGP*ISRAVV
Trigger: CACGACAGCTCTGGAAATCAAGGGGCCACGGAGCCC...TGTAGAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp AAATGTCTCCATCTGGTTCAAGCTGCTTCCTGGTTGGTCTGCTCTCGGGTAGAGAGTCCTCCCATCCACTaGCAGCTTTCCATCTGTGTG +
Preference number: 5 (lower is better)
Translates to: KCLHLVQAASWLVCSRVESPPIH*QLSICV
Trigger: CACACAGATGGAAAGCTGCAAGTGGATGGGAGGACT...CTCTACCCGAGAGCAGACCAACCAGGAAGCAGCTTGAACCAGATGGAGACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp ACTGTGATGAATGAGGCAAAGAAGCTGAAAGGAGATGAAACCCTGAGAGGCACAACCTCCCGTCCACATTaGGCTCCTTGGCACAGGCTC +
Preference number: 5 (lower is better)
Translates to: TVMNEAKKLKGDETLRGTTSRPH*APWHRL
Trigger: GAGCCTGTGCCAAGGAGCCAAATGTGGACGGGAGGT...TGTGCCTCTCAGGGTTTCATCTCCTTTCAGCTTCTTTGCCTCATTCATCACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp TGGTGGGTAGGATGCAGGGTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGGGAAAACAGCTCTCCTaGAGGCCTTGGTATCCTCGA +
Preference number: 5 (lower is better)
Translates to: WWVGCRVRIEGALRQRDKGKQLS*RPWYPR
Trigger: TCGAGGATACCAAGGCCTCAAGGAGAGCTGTTTTCC...CTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGACCCTGCATCCTACCCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 90 bp CCTGACACCTGTACAGCTGCAGGGTGTGACGGTTGCCTTGATGAGTaGTCTCGTATTTTGGCAAGCCACAGTAACGGTCCAGTTCTATGT +
Preference number: 5 (lower is better)
Translates to: PDTCTAAGCDGCLDE*SRILASHSNGPVLC
Trigger: ACATAGAACTGGACCGTTACTGTGGCTTGCCAAAATACGAGATCACTCATCAAGGCAACCGTCACACCCTGCAGCTGTACAGGTGTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 90 bp GGAACAGTAAGTCTGCAGGGGCTTGCCCAGATCTTCCTCCAGGGTTaGATATGGTATATTGTTTGCAGGCCGGTAGATCAAGTAGAGTGG +
Preference number: 5 (lower is better)
Translates to: GTVSLQGLAQIFLQG*IWYIVCRPVDQVEW
Trigger: CCACTCTACTTGATCTACCGGCCTGCAAACAATATACCATATGCAACCCTGGAGGAAGATCTGGGCAAGCCCCTGCAGACTTACTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp CCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCCTACTGGAGTTGGGTTaGTCTGTACTGGGGACGACG +
Preference number: 5 (lower is better)
Translates to: PEQDQEQMVGGRQKDILLLLELG*SVLGTT
Trigger: CGTCGTCCCCAGTACAGACAAACCCAACTCCAGTAG...GAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp AGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTACAGGACCCTGGCCCCAATaGCAGAGTGGGAGCAGAACT +
Preference number: 5 (lower is better)
Translates to: SRIKSKWLEVGRKISFSTGPWPQ*QSGSRT
Trigger: AGTTCTGCTCCCACTCTGCAATTGGGGCCAGGGTCC...TGTAGAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp AGCAACAAACAGGACACACAGTCACTGCCTTTATTGCATAGCAAGGGGAGCAGGGTCCTTAGCTTTCCTTaGCTTGGCCAGAGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SNKQDTQSLPLLHSKGSRVLSFP*LGQSFL
Trigger: CAGGAAGCTCTGGCCAAGCAAAGGAAAGCTAAGGAC...CCTGCTCCCCTTGCTATGCAATAAAGGCAGTGACTGTGTGTCCTGTTTGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 90 bp TGGCCATGGACAACTGCTCTGATTGGGTTTCGAAAGCTACAGGAATaGTGCCTGCTGCTGACTGTGTCTCTTTTTCTTCCTCCTGTATCC +
Preference number: 5 (lower is better)
Translates to: WPWTTALIGFRKLQE*CLLLTVSLFLPPVS
Trigger: GGATACAGGAGGAAGAAAAAGAGACACAGTCAGCAGCAGGCAGCATTCCTGTAGCTTTCGAAACCCAATCAGAGCAGTTGTCCATGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp CAGCTGCAGGGTGTGACGGTTGCCTTGATGAGTGATCTCGTATTTTaGCAAGCCACAGTAACGGTCCAGTTCTATGTCATCCTTGTACCA +
Preference number: 5 (lower is better)
Translates to: QLQGVTVALMSDLVF*QATVTVQFYVILVP
Trigger: TGGTACAAGGATGACATAGAACTGGACCGTTACTGTGGCTTGCCAAAATACGAGATCACTCATCAAGGCAACCGTCACACCCTGCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp CTGAAGGCTGCCTCTTCAGACCGCAGCATCAAGTCAGATCTTTCTTaGACACAGGGTGCCTCTGTGCTCTTCTCAAAACATTCTATAGCC +
Preference number: 5 (lower is better)
Translates to: LKAASSDRSIKSDLS*TQGASVLFSKHSIA
Trigger: GGCTATAGAATGTTTTGAGAAGAGCACAGAGGCACCCTGTGTCCAAGAAAGATCTGACTTGATGCTGCGGTCTGAAGAGGCAGCCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp GTAAGTCTGCAGGGGCTTGCCCAGATCTTCCTCCAGGGTTGCATATaGTATATTGTTTGCAGGCCGGTAGATCAAGTAGAGTGGGATGAT +
Preference number: 5 (lower is better)
Translates to: VSLQGLAQIFLQGCI*YIVCRPVDQVEWDD
Trigger: ATCATCCCACTCTACTTGATCTACCGGCCTGCAAACAATATACCATATGCAACCCTGGAGGAAGATCTGGGCAAGCCCCTGCAGACTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp ATTCCCTGGGGACCCACACCTGAGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCATATGGTATATTGTTaGCAGGCCGGTAGATCAAGT +
Preference number: 5 (lower is better)
Translates to: IPWGPTPEQDQEQMVGGRHMVYC*QAGRSS
Trigger: ACTTGATCTACCGGCCTGCAAACAATATACCATATG...CCTACCTCCAACCATTTGCTCTTGATCCTGCTCAGGTGTGGGTCCCCAGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp ACTGTGATGAATGAGGCAAAGAAGCTGAAAGGAGATGAAACCCTGAGAGGCACACCAGTGCTGGAAGGTTaGGCATTTCTGCAAGGCCTC +
Preference number: 5 (lower is better)
Translates to: TVMNEAKKLKGDETLRGTPVLEG*AFLQGL
Trigger: GAGGCCTTGCAGAAATGCCAAACCTTCCAGCACTGG...TGTGCCTCTCAGGGTTTCATCTCCTTTCAGCTTCTTTGCCTCATTCATCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 90 bp GTTCACTTCGCCCACTGGGTGCTGATCCTTCGCCCATGTCAAGACTaGGTCACTAACAATGTTGAAAAACTGGCACCAAAGCTTCAGACT +
Preference number: 5 (lower is better)
Translates to: VHFAHWVLILRPCQD*VTNNVEKLAPKLQT
Trigger: AGTCTGAAGCTTTGGTGCCAGTTTTTCAACATTGTTAGTGACTCAGTCTTGACATGGGCGAAGGATCAGCACCCAGTGGGCGAAGTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp GTCAGGATAGAAGGAGCCCTTAGACAAAGGGATAAGCAAAAGCCAGGGAAGGGCGTAGTTGACTCCACTTaGGATTTAGGAGGGGCAAAT +
Preference number: 5 (lower is better)
Translates to: VRIEGALRQRDKQKPGKGVVDST*DLGGAN
Trigger: ATTTGCCCCTCCTAAATCCAAAGTGGAGTCAACTAC...GCCCTTCCCTGGCTTTTGCTTATCCCTTTGTCTAAGGGCTCCTTCTATCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp ACTGTGATGAATGAGGCAAAGAAGCTGAAAGGAGATGAAACCCTGAGAGGCACACAAGTCAGATCTTTCTaGGACACAGGGTGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: TVMNEAKKLKGDETLRGTQVRSF*DTGCLC
Trigger: ACAGAGGCACCCTGTGTCCAAGAAAGATCTGACTTG...TGTGCCTCTCAGGGTTTCATCTCCTTTCAGCTTCTTTGCCTCATTCATCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 90 bp GAAGGTAGAGCCTTCCCTAAGCTCTGGGCCATAGATTCTGAAGTCTaGCTTGAGAGAGAGGTAGTAGTTGACTCCACTTTGGATTTAGGA +
Preference number: 5 (lower is better)
Translates to: EGRAFPKLWAIDSEV*LEREVVVDSTLDLG
Trigger: TCCTAAATCCAAAGTGGAGTCAACTACTACCTCTCTCTCAAGTCAGACTTCAGAATCTATGGCCCAGAGCTTAGGGAAGGCTCTACCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp AGCAGGATCAAGAGCAAATGGTTGGAGGTAGGCAGAAAGATATCCTTCTCTACACTCATGTTCTGGATCTaGCATCCCTGGATAGTGACG +
Preference number: 5 (lower is better)
Translates to: SRIKSKWLEVGRKISFSTLMFWI*HPWIVT
Trigger: CGTCACTATCCAGGGATGCAAGATCCAGAACATGAG...TGTAGAGAAGGATATCTTTCTGCCTACCTCCAACCATTTGCTCTTGATCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS-3UTR CAA 90 bp AGCAACAAACAGGACACACAGTCACTGCCTTTATTGCATAGCAAGGGGAGCAGGTGGTATCCTCGAAGTTaGGTAGCAATCTGTACATCA +
Preference number: 5 (lower is better)
Translates to: SNKQDTQSLPLLHSKGSRWYPRS*VAICTS
Trigger: TGATGTACAGATTGCTACCAAACTTCGAGGATACCA...CCTGCTCCCCTTGCTATGCAATAAAGGCAGTGACTGTGTGTCCTGTTTGTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 90 bp TCCTTCGCCCATGTCAAGACTGAGTCACTAACAATGTTGAAAAACTaGCACCAAAGCTTCAGACTACCAGAAGAATCTGGAAACTGTTCC +
Preference number: 5 (lower is better)
Translates to: SFAHVKTESLTMLKN*HQSFRLPEESGNCS
Trigger: GGAACAGTTTCCAGATTCTTCTGGTAGTCTGAAGCTTTGGTGCCAGTTTTTCAACATTGTTAGTGACTCAGTCTTGACATGGGCGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp CTCTGGCCGCACGCTAAGCAAGTAGCTGCGACTGGCTaGGCCGGGCGTCCACACCGGCCCGTCGTCCTCGCT +
Preference number: 6 (lower is better)
Translates to: LWPHAKQVAATG*AGRPHRPVVLA
Trigger: AGCGAGGACGACGGGCCGGTGTGGACGCCCGGCCCAGCCAGTCGCAGCTACTTGCTTAGCGTGCGGCCAGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp CCTCCGGGCCCCCAGAGCCAGTTCCTCGGGTGTAGCTaGAGGGAGACCCGTCAAAGCCTCCCCTGGCATTGC +
Preference number: 6 (lower is better)
Translates to: PPGPQSQFLGCS*RETRQSLPWHC
Trigger: GCAATGCCAGGGGAGGCTTTGACGGGTCTCCCTGCAGCTACACCCGAGGAACTGGCTCTGGGGGCCCGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp GTCCGTGGGAGACGCCTGCACGATGGCCAAAGCCGCTaGCCCCTCGTCCCCTGCACTCCTGTTCACTTCGCC +
Preference number: 6 (lower is better)
Translates to: VRGRRLHDGQSR*PLVPCTPVHFA
Trigger: GGCGAAGTGAACAGGAGTGCAGGGGACGAGGGGCCAGCGGCTTTGGCCATCGTGCAGGCGTCTCCCACGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp GCGCCAGGCACCTCTAACATGCTGGCTTTTCGGGCCTaGGTAGGGGACCGTCTCTCCCGCCCTGGAGTCCCT +
Preference number: 6 (lower is better)
Translates to: APGTSNMLAFRA*VGDRLSRPGVP
Trigger: AGGGACTCCAGGGCGGGAGAGACGGTCCCCTACCCAGGCCCGAAAAGCCAGCATGTTAGAGGTGCCTGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp GATACACACCACAGTCCGTGGGAGACGCCTGCACGATaGCCAAAGCCGCTGGCCCCTCGTCCCCTGCACTCC +
Preference number: 6 (lower is better)
Translates to: DTHHSPWETPAR*PKPLAPRPLHS
Trigger: GGAGTGCAGGGGACGAGGGGCCAGCGGCTTTGGCCATCGTGCAGGCGTCTCCCACGGACTGTGGTGTGTATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp GTACAGCGATACACACCACAGTCCGTGGGAGACGCCTaGACGATGGCCAAAGCCGCTGGCCCCTCGTCCCCT +
Preference number: 6 (lower is better)
Translates to: VQRYTPQSVGDA*TMAKAAGPSSP
Trigger: AGGGGACGAGGGGCCAGCGGCTTTGGCCATCGTGCAGGCGTCTCCCACGGACTGTGGTGTGTATCGCTGTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp CCCCCGTGCTACCCGGCCTCTGGGCTGGGTCTGAGCTaGCTGTGTATCCGTGGACTTCTCCCTTCTACTGGA +
Preference number: 6 (lower is better)
Translates to: PPCYPASGLGLS*LCIRGLLPSTG
Trigger: TCCAGTAGAAGGGAGAAGTCCACGGATACACAGCCAGCTCAGACCCAGCCCAGAGGCCGGGTAGCACGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp GGCACAGGCTCCCTCACTGCTAGTAGCCATGGCTTCTaGTGGGTGACTCTGAGTGGGGGACCCTGGCCCCAA +
Preference number: 6 (lower is better)
Translates to: GTGSLTASSHGF*WVTLSGGPWPQ
Trigger: TTGGGGCCAGGGTCCCCCACTCAGAGTCACCCACCAGAAGCCATGGCTACTAGCAGTGAGGGAGCCTGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp TGTTCTCCACGCGTTCCAGGATTCGCCTCGACGTCCTaGGACTCAGCCCAGCCACCTCCATGGTGGGGACCA +
Preference number: 6 (lower is better)
Translates to: CSPRVPGFASTS*DSAQPPPWWGP
Trigger: TGGTCCCCACCATGGAGGTGGCTGGGCTGAGTCCCAGGACGTCGAGGCGAATCCTGGAACGCGTGGAGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 90 bp TGGGGACTCCAGAGCCTCTCCTGGAGTCTTGTGGCTCGTTTGTCCTaGCAAGGGGCTATCTCGGGTGCCGTGTCTCCGTCGAGCAGGGGG +
Preference number: 6 (lower is better)
Translates to: WGLQSLSWSLVARLS*QGAISGAVSPSSRG
Trigger: CCCCCTGCTCGACGGAGACACGGCACCCGAGATAGCCCCTTGCAAGGACAAACGAGCCACAAGACTCCAGGAGAGGCTCTGGAGTCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 90 bp CATGGCTTCTGGTGGGTGACTCTGAGTGGGGGACCCTGGCCCCAATaGCAGAGTGGGAGCAGAACTCGGAAAGTCCTGGTCCCTGGAGGG +
Preference number: 6 (lower is better)
Translates to: HGFWWVTLSGGPWPQ*QSGSRTRKVLVPGG
Trigger: CCCTCCAGGGACCAGGACTTTCCGAGTTCTGCTCCCACTCTGCAATTGGGGCCAGGGTCCCCCACTCAGAGTCACCCACCAGAAGCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp GGAGCTGCTGTTGGCAGACTTGGTGGGAGCCACGGTTaGTGGGGACTCCAGAGCCTCTCCTGGAGTCTTGTG +
Preference number: 6 (lower is better)
Translates to: GAAVGRLGGSHG*WGLQSLSWSLV
Trigger: CACAAGACTCCAGGAGAGGCTCTGGAGTCCCCAGCAACCGTGGCTCCCACCAAGTCTGCCAACAGCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp TGGTCCCTGGAGGGGAGGGGGACATCTGTGTTTGTGTaGAGAGAAGCTGCGGTGCCTGGTAGCTCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: WSLEGRGTSVFV*REAAVPGSSSC
Trigger: GCAGGAGGAGCTACCAGGCACCGCAGCTTCTCTGCACACAAACACAGATGTCCCCCTCCCCTCCAGGGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp GTGCCGTGTCTCCGTCGAGCAGGGGGTGTTGGGACCTaGGTAGAGGCTGAAGGTAGAGCCTTCCCTAAGCTC +
Preference number: 6 (lower is better)
Translates to: VPCLRRAGGVGT*VEAEGRAFPKL
Trigger: GAGCTTAGGGAAGGCTCTACCTTCAGCCTCTACCCAGGTCCCAACACCCCCTGCTCGACGGAGACACGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp GGGAGCCACGGTTGCTGGGGACTCCAGAGCCTCTCCTaGAGTCTTGTGGCTCGTTTGTCCTTGCAAGGGGCT +
Preference number: 6 (lower is better)
Translates to: GSHGCWGLQSLS*SLVARLSLQGA
Trigger: AGCCCCTTGCAAGGACAAACGAGCCACAAGACTCCAGGAGAGGCTCTGGAGTCCCCAGCAACCGTGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp GCTGCTGTTGGCAGACTTGGTGGGAGCCACGGTTGCTaGGGACTCCAGAGCCTCTCCTGGAGTCTTGTGGCT +
Preference number: 6 (lower is better)
Translates to: AAVGRLGGSHGC*GLQSLSWSLVA
Trigger: AGCCACAAGACTCCAGGAGAGGCTCTGGAGTCCCCAGCAACCGTGGCTCCCACCAAGTCTGCCAACAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp GACTCTGAGTGGGGGACCCTGGCCCCAATTGCAGAGTaGGAGCAGAACTCGGAAAGTCCTGGTCCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: DSEWGTLAPIAE*EQNSESPGPWR
Trigger: CCTCCAGGGACCAGGACTTTCCGAGTTCTGCTCCCACTCTGCAATTGGGGCCAGGGTCCCCCACTCAGAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp GAGGAGGAGGTTAAGCCCCCGGTGTCTGCCACTTCCTaGGACTCGGCCCTGGCTTCACTTGTCTCTGGACTG +
Preference number: 6 (lower is better)
Translates to: EEEVKPPVSATS*DSALASLVSGL
Trigger: CAGTCCAGAGACAAGTGAAGCCAGGGCCGAGTCCCAGGAAGTGGCAGACACCGGGGGCTTAACCTCCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp CGGAGCTGCTGTTGGCAGACTTGGTGGGAGCCACGGTaGCTGGGGACTCCAGAGCCTCTCCTGGAGTCTTGT +
Preference number: 6 (lower is better)
Translates to: RSCCWQTWWEPR*LGTPEPLLESC
Trigger: ACAAGACTCCAGGAGAGGCTCTGGAGTCCCCAGCAACCGTGGCTCCCACCAAGTCTGCCAACAGCAGCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 90 bp TCACAGCTCCGGGTACCTGAGGACCTCCCGTCCACATTTGGCTCCTaGGCACAGGCTCCCTCACTGCTAGTAGCCATGGCTTCTGGTGGG +
Preference number: 6 (lower is better)
Translates to: SQLRVPEDLPSTFGS*AQAPSLLVAMASGG
Trigger: CCCACCAGAAGCCATGGCTACTAGCAGTGAGGGAGCCTGTGCCAAGGAGCCAAATGTGGACGGGAGGTCCTCAGGTACCCGGAGCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp GGGCGGGGGCGGGGACATCCTGGACCTTGTCTTGAATaGCCAGGACAGAGGCTGTCTTCCTGGTGCTTTCTA +
Preference number: 6 (lower is better)
Translates to: GRGRGHPGPCLE*PGQRLSSWCFL
Trigger: TAGAAAGCACCAGGAAGACAGCCTCTGTCCTGGGCATTCAAGACAAGGTCCAGGATGTCCCCGCCCCCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp TGCCTTCTCACCTGCCTGTGTCCTTGGCGAAGCGTGTaGTCTGTCTTGTGCTCCGTCTCCCTGAGTCCTCCC +
Preference number: 6 (lower is better)
Translates to: CLLTCLCPWRSV*SVLCSVSLSPP
Trigger: GGGAGGACTCAGGGAGACGGAGCACAAGACAGAGCACACGCTTCGCCAAGGACACAGGCAGGTGAGAAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp CCACCTCTAGGACCCCTGAGCAGGACACGATGCCCTTaGTGTTCCGGGCAGAGGCTTGGTAGATGGCAGCAT +
Preference number: 6 (lower is better)
Translates to: PPLGPLSRTRCP*CSGQRLGRWQH
Trigger: ATGCTGCCATCTACCAAGCCTCTGCCCGGAACACCAAGGGCATCGTGTCCTGCTCAGGGGTCCTAGAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp AACGTCCGTCGGTGCCTTCTCACCTGCCTGTGTCCTTaGCGAAGCGTGTGCTCTGTCTTGTGCTCCGTCTCC +
Preference number: 6 (lower is better)
Translates to: NVRRCLLTCLCP*RSVCSVLCSVS
Trigger: GGAGACGGAGCACAAGACAGAGCACACGCTTCGCCAAGGACACAGGCAGGTGAGAAGGCACCGACGGACGTT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp AAGCTGCGGTGCCTGGTAGCTCCTCCTGCAGACTACTaGTTAGGCCCGTCCCAGGAAGAGAAGGCATGGCAG +
Preference number: 6 (lower is better)
Translates to: KLRCLVAPPADY*LGPSQEEKAWQ
Trigger: CTGCCATGCCTTCTCTTCCTGGGACGGGCCTAACCAGTAGTCTGCAGGAGGAGCTACCAGGCACCGCAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp AGCCCCCGGTGTCTGCCACTTCCTGGGACTCGGCCCTaGCTTCACTTGTCTCTGGACTGGATAGCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: SPRCLPLPGTRP*LHLSLDWIASA
Trigger: TGCTGAAGCTATCCAGTCCAGAGACAAGTGAAGCCAGGGCCGAGTCCCAGGAAGTGGCAGACACCGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp GGGTGTAGCTGCAGGGAGACCCGTCAAAGCCTCCCCTaGCATTGCTTCTTCTTGGCAGGGCTCCTGGGTTCT +
Preference number: 6 (lower is better)
Translates to: GCSCRETRQSLP*HCFFLAGLLGS
Trigger: AGAACCCAGGAGCCCTGCCAAGAAGAAGCAATGCCAGGGGAGGCTTTGACGGGTCTCCCTGCAGCTACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp CGTTTTGGATGGTACAGCGATACACACCACAGTCCGTaGGAGACGCCTGCACGATGGCCAAAGCCGCTGGCC +
Preference number: 6 (lower is better)
Translates to: RFGWYSDTHHSP*ETPARWPKPLA
Trigger: GGCCAGCGGCTTTGGCCATCGTGCAGGCGTCTCCCACGGACTGTGGTGTGTATCGCTGTACCATCCAAAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp CAGAGCCTCTCCTGGAGTCTTGTGGCTCGTTTGTCCTaGCAAGGGGCTATCTCGGGTGCCGTGTCTCCGTCG +
Preference number: 6 (lower is better)
Translates to: QSLSWSLVARLS*QGAISGAVSPS
Trigger: CGACGGAGACACGGCACCCGAGATAGCCCCTTGCAAGGACAAACGAGCCACAAGACTCCAGGAGAGGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp CAACGTCCGTCGGTGCCTTCTCACCTGCCTGTGTCCTaGGCGAAGCGTGTGCTCTGTCTTGTGCTCCGTCTC +
Preference number: 6 (lower is better)
Translates to: QRPSVPSHLPVS*AKRVLCLVLRL
Trigger: GAGACGGAGCACAAGACAGAGCACACGCTTCGCCAAGGACACAGGCAGGTGAGAAGGCACCGACGGACGTTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp AGTCCTGGTCCCTGGAGGGGAGGGGGACATCTGTGTTaGTGTGCAGAGAAGCTGCGGTGCCTGGTAGCTCCT +
Preference number: 6 (lower is better)
Translates to: SPGPWRGGGHLC*CAEKLRCLVAP
Trigger: AGGAGCTACCAGGCACCGCAGCTTCTCTGCACACAAACACAGATGTCCCCCTCCCCTCCAGGGACCAGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp CGGGTACCTGAGGACCTCCCGTCCACATTTGGCTCCTaGGCACAGGCTCCCTCACTGCTAGTAGCCATGGCT +
Preference number: 6 (lower is better)
Translates to: RVPEDLPSTFGS*AQAPSLLVAMA
Trigger: AGCCATGGCTACTAGCAGTGAGGGAGCCTGTGCCAAGGAGCCAAATGTGGACGGGAGGTCCTCAGGTACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 90 bp CTTGTGTCACAACGTCCGTCGGTGCCTTCTCACCTGCCTGTGTCCTaGGCGAAGCGTGTGCTCTGTCTTGTGCTCCGTCTCCCTGAGTCC +
Preference number: 6 (lower is better)
Translates to: LVSQRPSVPSHLPVS*AKRVLCLVLRLPES
Trigger: GGACTCAGGGAGACGGAGCACAAGACAGAGCACACGCTTCGCCAAGGACACAGGCAGGTGAGAAGGCACCGACGGACGTTGTGACACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 72 bp CACTCAGTCGGCGCTTTCTTTGGAAGCGGTCGGGGCTaGTCTTGCGAAGAAGCGTGTCAGCCTCCCCTGAAG +
Preference number: 6 (lower is better)
Translates to: HSVGAFFGSGRG*SCEEACQPPLK
Trigger: CTTCAGGGGAGGCTGACACGCTTCTTCGCAAGATCAGCCCCGACCGCTTCCAAAGAAAGCGCCGACTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp AGAGCCTCTCCTGGAGTCTTGTGGCTCGTTTGTCCTTaGAAGGGGCTATCTCGGGTGCCGTGTCTCCGTCGA +
Preference number: 6 (lower is better)
Translates to: RASPGVLWLVCP*KGLSRVPCLRR
Trigger: TCGACGGAGACACGGCACCCGAGATAGCCCCTTGCAAGGACAAACGAGCCACAAGACTCCAGGAGAGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp TGGCCTCTCACTTCCTTGTGTCACAACGTCCGTCGGTaGCTTCTCACCTGCCTGTGTCCTTGGCGAAGCGTG +
Preference number: 6 (lower is better)
Translates to: WPLTSLCHNVRR*LLTCLCPWRSV
Trigger: CACGCTTCGCCAAGGACACAGGCAGGTGAGAAGGCACCGACGGACGTTGTGACACAAGGAAGTGAGAGGCCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp GTGTGCAGAGAAGCTGCGGTGCCTGGTAGCTCCTCCTaGAGACTACTGGTTAGGCCCGTCCCAGGAAGAGAA +
Preference number: 6 (lower is better)
Translates to: VCREAAVPGSSS*RLLVRPVPGRE
Trigger: TTCTCTTCCTGGGACGGGCCTAACCAGTAGTCTGCAGGAGGAGCTACCAGGCACCGCAGCTTCTCTGCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp AGCTGCAGGGAGACCCGTCAAAGCCTCCCCTGGCATTaGTTCTTCTTGGCAGGGCTCCTGGGTTCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: SCRETRQSLPWH*FFLAGLLGSAF
Trigger: GAAAGCAGAACCCAGGAGCCCTGCCAAGAAGAAGCAATGCCAGGGGAGGCTTTGACGGGTCTCCCTGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp CATGGCTTCTGGTGGGTGACTCTGAGTGGGGGACCCTaGCCCCAATTGCAGAGTGGGAGCAGAACTCGGAAA +
Preference number: 6 (lower is better)
Translates to: HGFWWVTLSGGP*PQLQSGSRTRK
Trigger: TTTCCGAGTTCTGCTCCCACTCTGCAATTGGGGCCAGGGTCCCCCACTCAGAGTCACCCACCAGAAGCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp AGTCGGCGCTTTCTTTGGAAGCGGTCGGGGCTGATCTaGCGAAGAAGCGTGTCAGCCTCCCCTGAAGCCTCT +
Preference number: 6 (lower is better)
Translates to: SRRFLWKRSGLI*RRSVSASPEAS
Trigger: AGAGGCTTCAGGGGAGGCTGACACGCTTCTTCGCAAGATCAGCCCCGACCGCTTCCAAAGAAAGCGCCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp GGACTCCAGAGCCTCTCCTGGAGTCTTGTGGCTCGTTaGTCCTTGCAAGGGGCTATCTCGGGTGCCGTGTCT +
Preference number: 6 (lower is better)
Translates to: GLQSLSWSLVAR*SLQGAISGAVS
Trigger: AGACACGGCACCCGAGATAGCCCCTTGCAAGGACAAACGAGCCACAAGACTCCAGGAGAGGCTCTGGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp GCCTGGGACTCTCTAGGGCATCCTGATGGTGAGCCTTaGAGAGCTCCAGGAAGTGAGCTGAGGCTGGCCATG +
Preference number: 6 (lower is better)
Translates to: AWDSLGHPDGEP*RAPGSELRLAM
Trigger: CATGGCCAGCCTCAGCTCACTTCCTGGAGCTCTCAAAGGCTCACCATCAGGATGCCCTAGAGAGTCCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 72 bp TATTGTTTGCAGGCCGGTAGATCAAGTAGAGTGGGATaGTCTCGGGCACCTCTCCGAAGCCAGAGGCCGCCC +
Preference number: 6 (lower is better)
Translates to: YCLQAGRSSRVG*SRAPLRSQRPP
Trigger: GGGCGGCCTCTGGCTTCGGAGAGGTGCCCGAGATCATCCCACTCTACTTGATCTACCGGCCTGCAAACAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp GCCTCCCCTGAAGCCTCTTTTCCATGCTTCCAGCTCTaGTCAATCTCCCTCATCTTGGCTGCAGCCTTGCGC +
Preference number: 6 (lower is better)
Translates to: ASPEASFPCFQL*SISLILAAALR
Trigger: GCGCAAGGCTGCAGCCAAGATGAGGGAGATTGAGCAGAGCTGGAAGCATGGAAAAGAGGCTTCAGGGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp TCTTCCTCCTGTATCCTTGCGTCTCCAGGGTCTTGCTaGCACCTCTCACCTGCCTGCATCTGTCCTACCTGC +
Preference number: 6 (lower is better)
Translates to: SSSCILASPGSC*HLSPACICPTC
Trigger: GCAGGTAGGACAGATGCAGGCAGGTGAGAGGTGGCAGCAAGACCCTGGAGACGCAAGGATACAGGAGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp GGGGGACATCTGTGTTTGTGTGCAGAGAAGCTGCGGTaGCTGGTAGCTCCTCCTGCAGACTACTGGTTAGGC +
Preference number: 6 (lower is better)
Translates to: GGHLCLCAEKLR*LVAPPADYWLG
Trigger: GCCTAACCAGTAGTCTGCAGGAGGAGCTACCAGGCACCGCAGCTTCTCTGCACACAAACACAGATGTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp TCTTGGCAGGGCTCCTGGGTTCTGCTTTCCACTGTGTaGCCCTCCACTTCCCCTAGCAGTCCCTTCTTGTCA +
Preference number: 6 (lower is better)
Translates to: SWQGSWVLLSTV*PSTSPSSPFLS
Trigger: TGACAAGAAGGGACTGCTAGGGGAAGTGGAGGGGCACACAGTGGAAAGCAGAACCCAGGAGCCCTGCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp CTGGCATTGCTTCTTCTTGGCAGGGCTCCTGGGTTCTaGTTTCCACTGTGTGCCCCTCCACTTCCCCTAGCA +
Preference number: 6 (lower is better)
Translates to: LALLLLGRAPGF*FPLCAPPLPLA
Trigger: TGCTAGGGGAAGTGGAGGGGCACACAGTGGAAAGCAGAACCCAGGAGCCCTGCCAAGAAGAAGCAATGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp GGACACGGCACGGGACTTGAGTGTGGTCTCGAACAGTaGCTGGGTCTCCTCTGTGAGCTGAGCAATGATGGA +
Preference number: 6 (lower is better)
Translates to: GHGTGLECGLEQ*LGLLCELSNDG
Trigger: TCCATCATTGCTCAGCTCACAGAGGAGACCCAGCCACTGTTCGAGACCACACTCAAGTCCCGTGCCGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp ACAGCCTCTTCGACTCCACTCAGTCGGCGCTTTCTTTaGAAGCGGTCGGGGCTGATCTTGCGAAGAAGCGTG +
Preference number: 6 (lower is better)
Translates to: TASSTPLSRRFL*KRSGLILRRSV
Trigger: CACGCTTCTTCGCAAGATCAGCCCCGACCGCTTCCAAAGAAAGCGCCGACTGAGTGGAGTCGAAGAGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp GGCCTCTGGGCTGGGTCTGAGCTGGCTGTGTATCCGTaGACTTCTCCCTTCTACTGGAGTTGGGTTTGTCTG +
Preference number: 6 (lower is better)
Translates to: GLWAGSELAVYP*TSPFYWSWVCL
Trigger: CAGACAAACCCAACTCCAGTAGAAGGGAGAAGTCCACGGATACACAGCCAGCTCAGACCCAGCCCAGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp TGTCGTGATCAACAGAGACGGTATCGGAGCTGCTGTTaGCAGACTTGGTGGGAGCCACGGTTGCTGGGGACT +
Preference number: 6 (lower is better)
Translates to: CRDQQRRYRSCC*QTWWEPRLLGT
Trigger: AGTCCCCAGCAACCGTGGCTCCCACCAAGTCTGCCAACAGCAGCTCCGATACCGTCTCTGTTGATCACGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp GACTACTGGTTAGGCCCGTCCCAGGAAGAGAAGGCATaGCAGGCACCTCCTGACTCAAGCCAGTTGAATGCC +
Preference number: 6 (lower is better)
Translates to: DYWLGPSQEEKA*QAPPDSSQLNA
Trigger: GGCATTCAACTGGCTTGAGTCAGGAGGTGCCTGCCATGCCTTCTCTTCCTGGGACGGGCCTAACCAGTAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp CCCAATTGCAGAGTGGGAGCAGAACTCGGAAAGTCCTaGTCCCTGGAGGGGAGGGGGACATCTGTGTTTGTG +
Preference number: 6 (lower is better)
Translates to: PNCRVGAELGKS*SLEGRGTSVFV
Trigger: CACAAACACAGATGTCCCCCTCCCCTCCAGGGACCAGGACTTTCCGAGTTCTGCTCCCACTCTGCAATTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp AACCTGACGTCACTGTCTTCGGACACGGCACGGGACTaGAGTGTGGTCTCGAACAGTGGCTGGGTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: NLTSLSSDTARD*SVVSNSGWVSS
Trigger: AGAGGAGACCCAGCCACTGTTCGAGACCACACTCAAGTCCCGTGCCGTGTCCGAAGACAGTGACGTCAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp GACAGCCTCTTCGACTCCACTCAGTCGGCGCTTTCTTaGGAAGCGGTCGGGGCTGATCTTGCGAAGAAGCGT +
Preference number: 6 (lower is better)
Translates to: DSLFDSTQSALS*EAVGADLAKKR
Trigger: ACGCTTCTTCGCAAGATCAGCCCCGACCGCTTCCAAAGAAAGCGCCGACTGAGTGGAGTCGAAGAGGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 90 bp CGGATCACCTGTGGGGCTTTTAGCAGGTCCTTAGCTTTCCTTTGCTaGGCCAGAGCTTCCTGCTTGCCTTCATCCACCGCAGGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: RITCGAFSRSLAFLC*ARASCLPSSTAGSE
Trigger: CTCAGAGCCTGCGGTGGATGAAGGCAAGCAGGAAGCTCTGGCCAAGCAAAGGAAAGCTAAGGACCTGCTAAAAGCCCCACAGGTGATCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 72 bp GTGGTCTCGAACAGTGGCTGGGTCTCCTCTGTGAGCTaGGCAATGATGGAGCAGAAGGTGCTCCTTCCAGAG +
Preference number: 6 (lower is better)
Translates to: VVSNSGWVSSVS*AMMEQKVLLPE
Trigger: CTCTGGAAGGAGCACCTTCTGCTCCATCATTGCTCAGCTCACAGAGGAGACCCAGCCACTGTTCGAGACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 72 bp GCAGCCTTGCGCTTCAACTTGGCGAACCAGCGCTGGTaGATCTTGTACTCCGTCATAGTGCCCACCTCTAGG +
Preference number: 6 (lower is better)
Translates to: AALRFNLANQRW*ILYSVIVPTSR
Trigger: CCTAGAGGTGGGCACTATGACGGAGTACAAGATTCACCAGCGCTGGTTCGCCAAGTTGAAGCGCAAGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 72 bp GGAGCAAAACTGTTGATCAAACCCAACCCCGGGTGCTaGGCAGACTCAGTCTCTCCTTCCTGCCAAGCCGCT +
Preference number: 6 (lower is better)
Translates to: GAKLLIKPNPGC*ADSVSPSCQAA
Trigger: AGCGGCTTGGCAGGAAGGAGAGACTGAGTCTGCTCAGCACCCGGGGTTGGGTTTGATCAACAGTTTTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 72 bp CATGAACATGTCCTTCAGGGAGAAATACACCTGCTCTaGGCTGCGGCTTGGAACAGGGGTGGGTGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: HEHVLQGEIHLL*AAAWNRGGCRD
Trigger: GTCCCTGCACCCACCCCTGTTCCAAGCCGCAGCTCAGAGCAGGTGTATTTCTCCCTGAAGGACATGTTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp CCTTGCGTCTCCAGGGTCTTGCTGCCACCTCTCACCTaGCTGCATCTGTCCTACCTGCATATCCACTCTTCT +
Preference number: 6 (lower is better)
Translates to: PCVSRVLLPPLT*LHLSYLHIHSS
Trigger: AGAAGAGTGGATATGCAGGTAGGACAGATGCAGGCAGGTGAGAGGTGGCAGCAAGACCCTGGAGACGCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp AGGTCCTTAGCTTTCCTTTGCTTGGCCAGAGCTTCCTaGTTGCCTTCATCCACCGCAGGCTCTGAGTCCAGG +
Preference number: 6 (lower is better)
Translates to: RSLAFLCLARAS*LPSSTAGSESR
Trigger: CCTGGACTCAGAGCCTGCGGTGGATGAAGGCAAGCAGGAAGCTCTGGCCAAGCAAAGGAAAGCTAAGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp TCGGGGCTGAGGCAGAAGTCAGTGGACGCTGAGCCATaGTCGTTTTGGATGGTACAGCGATACACACCACAG +
Preference number: 6 (lower is better)
Translates to: SGLRQKSVDAEP*SFWMVQRYTPQ
Trigger: CTGTGGTGTGTATCGCTGTACCATCCAAAACGAGCATGGCTCAGCGTCCACTGACTTCTGCCTCAGCCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp CACCTCTCCGAAGCCAGAGGCCGCCCGGGCTTCAGCTaGAAAGATTTTGCAGTACTCTCGACTCATGTTCTG +
Preference number: 6 (lower is better)
Translates to: HLSEARGRPGFS*KDFAVLSTHVL
Trigger: CAGAACATGAGTCGAGAGTACTGCAAAATCTTTGCAGCTGAAGCCCGGGCGGCCTCTGGCTTCGGAGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp CCGCAGGCTCTGAGTCCAGGCCACTGTCTTTGGATCTaGAGACCAAGTCTCCAGTTGCAGGCTCTTCTTCTG +
Preference number: 6 (lower is better)
Translates to: PQALSPGHCLWI*RPSLQLQALLL
Trigger: CAGAAGAAGAGCCTGCAACTGGAGACTTGGTCTCCAGATCCAAAGACAGTGGCCTGGACTCAGAGCCTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp CATCCACCGCAGGCTCTGAGTCCAGGCCACTGTCTTTaGATCTGGAGACCAAGTCTCCAGTTGCAGGCTCTT +
Preference number: 6 (lower is better)
Translates to: HPPQALSPGHCL*IWRPSLQLQAL
Trigger: AAGAGCCTGCAACTGGAGACTTGGTCTCCAGATCCAAAGACAGTGGCCTGGACTCAGAGCCTGCGGTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp GAGAAGGCATGGCAGGCACCTCCTGACTCAAGCCAGTaGAATGCCCACCAGAGAGACCCACATGAAGCGGTT +
Preference number: 6 (lower is better)
Translates to: EKAWQAPPDSSQ*NAHQRDPHEAV
Trigger: AACCGCTTCATGTGGGTCTCTCTGGTGGGCATTCAACTGGCTTGAGTCAGGAGGTGCCTGCCATGCCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp TCATCCACCGCAGGCTCTGAGTCCAGGCCACTGTCTTaGGATCTGGAGACCAAGTCTCCAGTTGCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: SSTAGSESRPLS*DLETKSPVAGS
Trigger: AGAGCCTGCAACTGGAGACTTGGTCTCCAGATCCAAAGACAGTGGCCTGGACTCAGAGCCTGCGGTGGATGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 90 bp GATGTGGGCTGGCTGGAGACCATCGGTACCTTCTCCAGTCTAGACTaGACTGGTGTCTTTCCTGGGGGACTTTCTCCAGCTACCCTGGTA +
Preference number: 6 (lower is better)
Translates to: DVGWLETIGTFSSLD*TGVFPGGLSPATLV
Trigger: TACCAGGGTAGCTGGAGAAAGTCCCCCAGGAAAGACACCAGTCAAGTCTAGACTGGAGAAGGTACCGATGGTCTCCAGCCAGCCCACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 90 bp TGCTGCCTGCTGCTGACTGTGTCTCTTTTTCTTCCTCCTGTATCCTaGCGTCTCCAGGGTCTTGCTGCCACCTCTCACCTGCCTGCATCT +
Preference number: 6 (lower is better)
Translates to: CCLLLTVSLFLPPVS*RLQGLAATSHLPAS
Trigger: AGATGCAGGCAGGTGAGAGGTGGCAGCAAGACCCTGGAGACGCAAGGATACAGGAGGAAGAAAAAGAGACACAGTCAGCAGCAGGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 90 bp CATTCTATAGCCTGGGACTCTCTAGGGCATCCTGATGGTGAGCCTTaGAGAGCTCCAGGAAGTGAGCTGAGGCTGGCCATGGACAACTGC +
Preference number: 6 (lower is better)
Translates to: HSIAWDSLGHPDGEP*RAPGSELRLAMDNC
Trigger: GCAGTTGTCCATGGCCAGCCTCAGCTCACTTCCTGGAGCTCTCAAAGGCTCACCATCAGGATGCCCTAGAGAGTCCCAGGCTATAGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 90 bp CTGAGTCCAGGCCACTGTCTTTGGATCTGGAGACCAAGTCTCCAGTaGCAGGCTCTTCTTCTGCGCCAGGCACCTCTAACATGCTGGCTT +
Preference number: 6 (lower is better)
Translates to: LSPGHCLWIWRPSLQ*QALLLRQAPLTCWL
Trigger: AAGCCAGCATGTTAGAGGTGCCTGGCGCAGAAGAAGAGCCTGCAACTGGAGACTTGGTCTCCAGATCCAAAGACAGTGGCCTGGACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 90 bp AGAGAGGTCTCACTGCTGGGTCCGAACACAAGCAGGCTGGATACTTaGATGATGCACGTGCGGCCAGATTCGAAGATGGGTTCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: REVSLLGPNTSRLDT*MMHVRPDSKMGSSP
Trigger: TGGGCTGGAACCCATCTTCGAATCTGGCCGCACGTGCATCATCAAAGTATCCAGCCTGCTTGTGTTCGGACCCAGCAGTGAGACCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 72 bp ATGATGGAGCAGAAGGTGCTCCTTCCAGAGCTGGGGTaGGACAACCGGTTGCTTGATAAGCTAGCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: MMEQKVLLPELG*DNRLLDKLASG
Trigger: GCCAGAGGCTAGCTTATCAAGCAACCGGTTGTCTCACCCCAGCTCTGGAAGGAGCACCTTCTGCTCCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 72 bp ACTCCTTTGGAGGGCTGTTCTGAGGCCCCAGTTCCATaGCCTCGCAGATGTATGTCAGCAAGCCACGCTCTT +
Preference number: 6 (lower is better)
Translates to: TPLEGCSEAPVP*PRRCMSASHAL
Trigger: AAGAGCGTGGCTTGCTGACATACATCTGCGAGGTCATGGAACTGGGGCCTCAGAACAGCCCTCCAAAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 72 bp TCCCCTGCACTCCTGTTCACTTCGCCCACTGGGTGCTaGTCCTTCGCCCATGTCAAGACTGAGTCACTAACA +
Preference number: 6 (lower is better)
Translates to: SPALLFTSPTGC*SFAHVKTESLT
Trigger: TGTTAGTGACTCAGTCTTGACATGGGCGAAGGATCAGCACCCAGTGGGCGAAGTGAACAGGAGTGCAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 72 bp CAATACCTCGGGGCTGAGGCAGAAGTCAGTGGACGCTaGGCCATGCTCGTTTTGGATGGTACAGCGATACAC +
Preference number: 6 (lower is better)
Translates to: QYLGAEAEVSGR*AMLVLDGTAIH
Trigger: GTGTATCGCTGTACCATCCAAAACGAGCATGGCTCAGCGTCCACTGACTTCTGCCTCAGCCCCGAGGTATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp TCTCCCTCATCTTGGCTGCAGCCTTGCGCTTCAACTTaGCGAACCAGCGCTGGTGAATCTTGTACTCCGTCA +
Preference number: 6 (lower is better)
Translates to: SPSSWLQPCAST*RTSAGESCTPS
Trigger: TGACGGAGTACAAGATTCACCAGCGCTGGTTCGCCAAGTTGAAGCGCAAGGCTGCAGCCAAGATGAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp AGAAGTCAGTGGACGCTGAGCCATGCTCGTTTTGGATaGTACAGCGATACACACCACAGTCCGTGGGAGACG +
Preference number: 6 (lower is better)
Translates to: RSQWTLSHARFG*YSDTHHSPWET
Trigger: CGTCTCCCACGGACTGTGGTGTGTATCGCTGTACCATCCAAAACGAGCATGGCTCAGCGTCCACTGACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp AGGCAGAAGTCAGTGGACGCTGAGCCATGCTCGTTTTaGATGGTACAGCGATACACACCACAGTCCGTGGGA +
Preference number: 6 (lower is better)
Translates to: RQKSVDAEPCSF*MVQRYTPQSVG
Trigger: TCCCACGGACTGTGGTGTGTATCGCTGTACCATCCAAAACGAGCATGGCTCAGCGTCCACTGACTTCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp GGCCACTGTCTTTGGATCTGGAGACCAAGTCTCCAGTaGCAGGCTCTTCTTCTGCGCCAGGCACCTCTAACA +
Preference number: 6 (lower is better)
Translates to: GHCLWIWRPSLQ*QALLLRQAPLT
Trigger: TGTTAGAGGTGCCTGGCGCAGAAGAAGAGCCTGCAACTGGAGACTTGGTCTCCAGATCCAAAGACAGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 90 bp GCTGGCTGTGTATCCGTGGACTTCTCCCTTCTACTGGAGTTGGGTTaGTCTGTACTGGGGACGACGTTTTCTGAAGAGCACTGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: AGCVSVDFSLLLELG*SVLGTTFSEEHWLP
Trigger: AGGGAGCCAGTGCTCTTCAGAAAACGTCGTCCCCAGTACAGACAAACCCAACTCCAGTAGAAGGGAGAAGTCCACGGATACACAGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 90 bp ACCTCTCCGAAGCCAGAGGCCGCCCGGGCTTCAGCTGCAAAGATTTaGCAGTACTCTCGACTCATGTTCTGGATCTTGCATCCCTGGATA +
Preference number: 6 (lower is better)
Translates to: TSPKPEAARASAAKI*QYSRLMFWILHPWI
Trigger: TATCCAGGGATGCAAGATCCAGAACATGAGTCGAGAGTACTGCAAAATCTTTGCAGCTGAAGCCCGGGCGGCCTCTGGCTTCGGAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 72 bp TTCTTCTTAGCCCCAGACTCCTTTGGAGGGCTGTTCTaGGGCCCCAGTTCCATGACCTCGCAGATGTATGTC +
Preference number: 6 (lower is better)
Translates to: FFLAPDSFGGLF*GPSSMTSQMYV
Trigger: GACATACATCTGCGAGGTCATGGAACTGGGGCCTCAGAACAGCCCTCCAAAGGAGTCTGGGGCTAAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 72 bp GCTCTCCCTTTCTTCAGCCTTGTTTGCCTCTCCATCTaGCCCTGCTCTGACCTTAGGGAGGAACCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: ALPFFSLVCLSI*PCSDLREEPLP
Trigger: AGGAAGAGGTTCCTCCCTAAGGTCAGAGCAGGGTCAGATGGAGAGGCAAACAAGGCTGAAGAAAGGGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp GCTCCAGGAAGTGAGCTGAGGCTGGCCATGGACAACTaGTCTGATTGGGTTTCGAAAGCTACAGGAATGCTG +
Preference number: 6 (lower is better)
Translates to: APGSELRLAMDN*SDWVSKATGML
Trigger: CAGCATTCCTGTAGCTTTCGAAACCCAATCAGAGCAGTTGTCCATGGCCAGCCTCAGCTCACTTCCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp ACCTGTGGGGCTTTTAGCAGGTCCTTAGCTTTCCTTTaGTTGGCCAGAGCTTCCTGCTTGCCTTCATCCACC +
Preference number: 6 (lower is better)
Translates to: TCGAFSRSLAFL*LARASCLPSST
Trigger: GGTGGATGAAGGCAAGCAGGAAGCTCTGGCCAAGCAAAGGAAAGCTAAGGACCTGCTAAAAGCCCCACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp AGCCAGAGGCCGCCCGGGCTTCAGCTGCAAAGATTTTaGAGTACTCTCGACTCATGTTCTGGATCTTGCATC +
Preference number: 6 (lower is better)
Translates to: SQRPPGLQLQRF*STLDSCSGSCI
Trigger: GATGCAAGATCCAGAACATGAGTCGAGAGTACTGCAAAATCTTTGCAGCTGAAGCCCGGGCGGCCTCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp AGCCCCACTGCCTGGAACAGTAAGTCTGCAGGGGCTTaGCCAGATCTTCCTCCAGGGTTGCATATGGTATAT +
Preference number: 6 (lower is better)
Translates to: SPTAWNSKSAGA*PDLPPGLHMVY
Trigger: ATATACCATATGCAACCCTGGAGGAAGATCTGGGCAAGCCCCTGCAGACTTACTGTTCCAGGCAGTGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp AGTGAGCTGAGGCTGGCCATGGACAACTGCTCTGATTaGGTTTCGAAAGCTACAGGAATGCTGCCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: SELRLAMDNCSD*VSKATGMLPAA
Trigger: AGCAGCAGGCAGCATTCCTGTAGCTTTCGAAACCCAATCAGAGCAGTTGTCCATGGCCAGCCTCAGCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp TGGTATATTGTTTGCAGGCCGGTAGATCAAGTAGAGTaGGATGATCTCGGGCACCTCTCCGAAGCCAGAGGC +
Preference number: 6 (lower is better)
Translates to: WYIVCRPVDQVE*DDLGHLSEARG
Trigger: GCCTCTGGCTTCGGAGAGGTGCCCGAGATCATCCCACTCTACTTGATCTACCGGCCTGCAAACAATATACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp CTGCTGACTGTGTCTCTTTTTCTTCCTCCTGTATCCTaGCGTCTCCAGGGTCTTGCTGCCACCTCTCACCTG +
Preference number: 6 (lower is better)
Translates to: LLTVSLFLPPVS*RLQGLAATSHL
Trigger: CAGGTGAGAGGTGGCAGCAAGACCCTGGAGACGCAAGGATACAGGAGGAAGAAAAAGAGACACAGTCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp TCACTGCTGGGTCCGAACACAAGCAGGCTGGATACTTaGATGATGCACGTGCGGCCAGATTCGAAGATGGGT +
Preference number: 6 (lower is better)
Translates to: SLLGPNTSRLDT*MMHVRPDSKMG
Trigger: ACCCATCTTCGAATCTGGCCGCACGTGCATCATCAAAGTATCCAGCCTGCTTGTGTTCGGACCCAGCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 90 bp CTGTGTCTCTTTTTCTTCCTCCTGTATCCTTGCGTCTCCAGGGTCTaGCTGCCACCTCTCACCTGCCTGCATCTGTCCTACCTGCATATC +
Preference number: 6 (lower is better)
Translates to: LCLFFFLLYPCVSRV*LPPLTCLHLSYLHI
Trigger: GATATGCAGGTAGGACAGATGCAGGCAGGTGAGAGGTGGCAGCAAGACCCTGGAGACGCAAGGATACAGGAGGAAGAAAAAGAGACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp TACCTTCTCCAGTCTAGACTTGACTGGTGTCTTTCCTaGGGGACTTTCTCCAGCTACCCTGGTACTTGGAGG +
Preference number: 6 (lower is better)
Translates to: YLLQSRLDWCLS*GTFSSYPGTWR
Trigger: CCTCCAAGTACCAGGGTAGCTGGAGAAAGTCCCCCAGGAAAGACACCAGTCAAGTCTAGACTGGAGAAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp TTCCTGAGTTTCTGTATCCATGGGCTCCGTGGCCCCTaGATTTCCAGAGCTGTCGTGATCAACAGAGACGGT +
Preference number: 6 (lower is better)
Translates to: FLSFCIHGLRGP*ISRAVVINRDG
Trigger: ACCGTCTCTGTTGATCACGACAGCTCTGGAAATCAAGGGGCCACGGAGCCCATGGATACAGAAACTCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp GTCTTGTGCTCCGTCTCCCTGAGTCCTCCCATCCACTaGCAGCTTTCCATCTGTGTGTGTTTTCTTCCTGCT +
Preference number: 6 (lower is better)
Translates to: VLCSVSLSPPIH*QLSICVCFLPA
Trigger: AGCAGGAAGAAAACACACACAGATGGAAAGCTGCAAGTGGATGGGAGGACTCAGGGAGACGGAGCACAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp AAGCCAGAGGCCGCCCGGGCTTCAGCTGCAAAGATTTaGCAGTACTCTCGACTCATGTTCTGGATCTTGCAT +
Preference number: 6 (lower is better)
Translates to: KPEAARASAAKI*QYSRLMFWILH
Trigger: ATGCAAGATCCAGAACATGAGTCGAGAGTACTGCAAAATCTTTGCAGCTGAAGCCCGGGCGGCCTCTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 90 bp ATCTTCTTCCTGACACCTGTACAGCTGCAGGGTGTGACGGTTGCCTaGATGAGTGATCTCGTATTTTGGCAAGCCACAGTAACGGTCCAG +
Preference number: 6 (lower is better)
Translates to: IFFLTPVQLQGVTVA*MSDLVFWQATVTVQ
Trigger: CTGGACCGTTACTGTGGCTTGCCAAAATACGAGATCACTCATCAAGGCAACCGTCACACCCTGCAGCTGTACAGGTGTCAGGAAGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 72 bp TGTACAGCTGCAGGGTGTGACGGTTGCCTTGATGAGTaGTCTCGTATTTTGGCAAGCCACAGTAACGGTCCA +
Preference number: 6 (lower is better)
Translates to: CTAAGCDGCLDE*SRILASHSNGP
Trigger: TGGACCGTTACTGTGGCTTGCCAAAATACGAGATCACTCATCAAGGCAACCGTCACACCCTGCAGCTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp TGCTGCCACCTCTCACCTGCCTGCATCTGTCCTACCTaGATATCCACTCTTCTCTGTGTCACCAAATTCTTC +
Preference number: 6 (lower is better)
Translates to: CCHLSPACICPT*ISTLLCVTKFF
Trigger: GAAGAATTTGGTGACACAGAGAAGAGTGGATATGCAGGTAGGACAGATGCAGGCAGGTGAGAGGTGGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp AGTCTGCAGGGGCTTGCCCAGATCTTCCTCCAGGGTTaGATATGGTATATTGTTTGCAGGCCGGTAGATCAA +
Preference number: 6 (lower is better)
Translates to: SLQGLAQIFLQG*IWYIVCRPVDQ
Trigger: TTGATCTACCGGCCTGCAAACAATATACCATATGCAACCCTGGAGGAAGATCTGGGCAAGCCCCTGCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp GCTGTGTATCCGTGGACTTCTCCCTTCTACTGGAGTTaGGTTTGTCTGTACTGGGGACGACGTTTTCTGAAG +
Preference number: 6 (lower is better)
Translates to: AVYPWTSPFYWS*VCLYWGRRFLK
Trigger: CTTCAGAAAACGTCGTCCCCAGTACAGACAAACCCAACTCCAGTAGAAGGGAGAAGTCCACGGATACACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp TTCCATCTTCCTGAGTTTCTGTATCCATGGGCTCCGTaGCCCCTTGATTTCCAGAGCTGTCGTGATCAACAG +
Preference number: 6 (lower is better)
Translates to: FHLPEFLYPWAP*PLDFQSCRDQQ
Trigger: CTGTTGATCACGACAGCTCTGGAAATCAAGGGGCCACGGAGCCCATGGATACAGAAACTCAGGAAGATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp GGTGCCTCTGTGCTCTTCTCAAAACATTCTATAGCCTaGGACTCTCTAGGGCATCCTGATGGTGAGCCTTTG +
Preference number: 6 (lower is better)
Translates to: GASVLFSKHSIA*DSLGHPDGEPL
Trigger: CAAAGGCTCACCATCAGGATGCCCTAGAGAGTCCCAGGCTATAGAATGTTTTGAGAAGAGCACAGAGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp CAGGGGCTTGCCCAGATCTTCCTCCAGGGTTGCATATaGTATATTGTTTGCAGGCCGGTAGATCAAGTAGAG +
Preference number: 6 (lower is better)
Translates to: QGLAQIFLQGCI*YIVCRPVDQVE
Trigger: CTCTACTTGATCTACCGGCCTGCAAACAATATACCATATGCAACCCTGGAGGAAGATCTGGGCAAGCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp CTGACACCTGTACAGCTGCAGGGTGTGACGGTTGCCTaGATGAGTGATCTCGTATTTTGGCAAGCCACAGTA +
Preference number: 6 (lower is better)
Translates to: LTPVQLQGVTVA*MSDLVFWQATV
Trigger: TACTGTGGCTTGCCAAAATACGAGATCACTCATCAAGGCAACCGTCACACCCTGCAGCTGTACAGGTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 72 bp GCCCACTGGGTGCTGATCCTTCGCCCATGTCAAGACTaGGTCACTAACAATGTTGAAAAACTGGCACCAAAG +
Preference number: 6 (lower is better)
Translates to: AHWVLILRPCQD*VTNNVEKLAPK
Trigger: CTTTGGTGCCAGTTTTTCAACATTGTTAGTGACTCAGTCTTGACATGGGCGAAGGATCAGCACCCAGTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp TGCCTCTTCAGACCGCAGCATCAAGTCAGATCTTTCTaGGACACAGGGTGCCTCTGTGCTCTTCTCAAAACA +
Preference number: 6 (lower is better)
Translates to: CLFRPQHQVRSF*DTGCLCALLKT
Trigger: TGTTTTGAGAAGAGCACAGAGGCACCCTGTGTCCAAGAAAGATCTGACTTGATGCTGCGGTCTGAAGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS TCA 72 bp GCCTTCCCTAAGCTCTGGGCCATAGATTCTGAAGTCTaGCTTGAGAGAGAGGTAGTAGTTGACTCCACTTTG +
Preference number: 6 (lower is better)
Translates to: AFPKLWAIDSEV*LEREVVVDSTL
Trigger: CAAAGTGGAGTCAACTACTACCTCTCTCTCAAGTCAGACTTCAGAATCTATGGCCCAGAGCTTAGGGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp CCGCAGCATCAAGTCAGATCTTTCTTGGACACAGGGTaGCTCTGTGCTCTTCTCAAAACATTCTATAGCCTG +
Preference number: 6 (lower is better)
Translates to: PQHQVRSFLDTG*LCALLKTFYSL
Trigger: CAGGCTATAGAATGTTTTGAGAAGAGCACAGAGGCACCCTGTGTCCAAGAAAGATCTGACTTGATGCTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp GGTGTGACGGTTGCCTTGATGAGTGATCTCGTATTTTaGCAAGCCACAGTAACGGTCCAGTTCTATGTCATC +
Preference number: 6 (lower is better)
Translates to: GVTVALMSDLVF*QATVTVQFYVI
Trigger: GATGACATAGAACTGGACCGTTACTGTGGCTTGCCAAAATACGAGATCACTCATCAAGGCAACCGTCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS GCA 72 bp CAGATCTTCCTCCAGGGTTGCATATGGTATATTGTTTaGAGGCCGGTAGATCAAGTAGAGTGGGATGATCTC +
Preference number: 6 (lower is better)
Translates to: QIFLQGCIWYIV*RPVDQVEWDDL
Trigger: GAGATCATCCCACTCTACTTGATCTACCGGCCTGCAAACAATATACCATATGCAACCCTGGAGGAAGATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CAA 72 bp TCCTTCGCCCATGTCAAGACTGAGTCACTAACAATGTaGAAAAACTGGCACCAAAGCTTCAGACTACCAGAA +
Preference number: 6 (lower is better)
Translates to: SFAHVKTESLTM*KNWHQSFRLPE
Trigger: TTCTGGTAGTCTGAAGCTTTGGTGCCAGTTTTTCAACATTGTTAGTGACTCAGTCTTGACATGGGCGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2
CDS CCA 72 bp CATGTCAAGACTGAGTCACTAACAATGTTGAAAAACTaGCACCAAAGCTTCAGACTACCAGAAGAATCTGGA +
Preference number: 6 (lower is better)
Translates to: HVKTESLTMLKN*HQSFRLPEESG
Trigger: TCCAGATTCTTCTGGTAGTCTGAAGCTTTGGTGCCAGTTTTTCAACATTGTTAGTGACTCAGTCTTGACATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107348.2