Pregenerated sensors for ALPI (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079440Ensembl transcript IDs: ENSMUST00000113270.3
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTATAAATCCCAGAGTGTTTTCTCAGAGGTGGCCCTTAGAGCTGTaGGCTGAGATGATGTCTCAACATCTGGATAAGAAAACTACCAAG | + |
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Preference number: 1 (lower is better) Translates to: IINPRVFSQRWPLEL*AEMMSQHLDKKTTK Trigger: CTTGGTAGTTTTCTTATCCAGATGTTGAGACATCATCTCAGCCCACAGCTCTAAGGGCCACCTCTGAGAAAACACTCTGGGATTTATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| 3UTR CCA 90 bp | AGAGTTATAAAGCAAATTATAAATCCCAGAGTGTTTTCTCAGAGGTaGCCCTTAGAGCTGTGGGCTGAGATGATGTCTCAACATCTGGAT | + |
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Preference number: 1 (lower is better) Translates to: RVIKQIINPRVFSQR*PLELWAEMMSQHLD Trigger: ATCCAGATGTTGAGACATCATCTCAGCCCACAGCTCTAAGGGCCACCTCTGAGAAAACACTCTGGGATTTATAATTTGCTTTATAACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTGGTTTGAAGGGGAGTCTGGGGCAGCGCCGTGCTTTAGCCTTCTGGAAAGAACCCGGAACTGATTaGGCTCAGGAAATCTATGGC | + |
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Preference number: 2 (lower is better) Translates to: GGGLKGSLGQRRALAFWKEPGTD*AQEIYG Trigger: GCCATAGATTTCCTGAGCCCAATCAGTTCCGGGTTC...TTTCCAGAAGGCTAAAGCACGGCGCTGCCCCAGACTCCCCTTCAAACCACCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTGGTTTGAAGGGGAGTCTGGGGCAGCGCCGTGCTTTAGCCTTCTGGAAAAGCTGTGGGCTGAGATaGTGTCTCAACATCTGGATA | + |
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Preference number: 2 (lower is better) Translates to: GGGLKGSLGQRRALAFWKSCGLR*CLNIWI Trigger: TATCCAGATGTTGAGACATCATCTCAGCCCACAGCT...TTTCCAGAAGGCTAAAGCACGGCGCTGCCCCAGACTCCCCTTCAAACCACCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| 3UTR-3UTR CCA 90 bp | AGTCTGGGGCAGCGCCGTGCTTTAGCCTTCTGGAAATCAGTTGGTACCTCCCCATGGCCCTTAGAGCTGTaGGCTGAGATGATGTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: SLGQRRALAFWKSVGTSPWPLEL*AEMMSQ Trigger: TTGAGACATCATCTCAGCCCACAGCTCTAAGGGCCA...TGGGGAGGTACCAACTGATTTCCAGAAGGCTAAAGCACGGCGCTGCCCCAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTGGTTTGAAGGGGAGTCTGGGGCAGCGCCGTGCTTTAGCCTTCTGGAAAAGAAAACTACCAAGTTaGGGTGCAAAAACTAGCATT | + |
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Preference number: 2 (lower is better) Translates to: GGGLKGSLGQRRALAFWKRKLPS*GAKTSI Trigger: AATGCTAGTTTTTGCACCCCAACTTGGTAGTTTTCT...TTTCCAGAAGGCTAAAGCACGGCGCTGCCCCAGACTCCCCTTCAAACCACCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGAGGAAGTCAGTTGAAAAGCAGAAGCCTAGAGTTATAAAGCAAATTATAGAAAGTAACCAGCGGTaGGACCCTGGGGAGGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: LQRKSVEKQKPRVIKQIIESNQR*DPGEEP Trigger: AGGCTCCTCCCCAGGGTCCCACCGCTGGTTACTTTC...TATAATTTGCTTTATAACTCTAGGCTTCTGCTTTTCAACTGACTTCCTCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| 3UTR GCA 72 bp | GGGTGGTGGTTTGAAGGGGAGTCTGGGGCAGCGCCGTaGTTTAGCCTTCTGGAAATCAGTTGGTACCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: GWWFEGESGAAP*FSLLEISWYLP Trigger: GGGGAGGTACCAACTGATTTCCAGAAGGCTAAAGCACGGCGCTGCCCCAGACTCCCCTTCAAACCACCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| 3UTR CCA 72 bp | GACCCTTGTGTAGAAAACGGTGAACCCGGAACTGATTaGGCTCAGGAAATCTATGGCAAGAGGGGTGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: DPCVENGEPGTD*AQEIYGKRGVK Trigger: TTTCACACCCCTCTTGCCATAGATTTCCTGAGCCCAATCAGTTCCGGGTTCACCGTTTTCTACACAAGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| 3UTR CCA 72 bp | CCCAGAGTGTTTTCTCAGAGGTGGCCCTTAGAGCTGTaGGCTGAGATGATGTCTCAACATCTGGATAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: PRVFSQRWPLEL*AEMMSQHLDKK Trigger: TTTCTTATCCAGATGTTGAGACATCATCTCAGCCCACAGCTCTAAGGGCCACCTCTGAGAAAACACTCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| 3UTR-3UTR CAA 90 bp | CTCCAGAGGAAGTCAGTTGAAAAGCAGAAGCCTAGAGTTATAAAGCAAATTATAGTGCAAAAACTAGCATaGAGACCCTTGTGTAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: LQRKSVEKQKPRVIKQIIVQKLA*RPLCRK Trigger: TTTTCTACACAAGGGTCTCAATGCTAGTTTTTGCAC...TATAATTTGCTTTATAACTCTAGGCTTCTGCTTTTCAACTGACTTCCTCTGGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR GCA 90 bp | AGTCTGGGGCAGCGCCGTGCTTTAGCCTTCTGGAAATCAGTTGGTACCTCCCCAGGCGGTTGCTGTGCCTaGGCTGTCTGGGACCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: SLGQRRALAFWKSVGTSPGGCCA*AVWDLS Trigger: AGACAGGTCCCAGACAGCGCAGGCACAGCAACCGCC...TGGGGAGGTACCAACTGATTTCCAGAAGGCTAAAGCACGGCGCTGCCCCAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CCA 90 bp | GAACCCGGAACTGATTGGGCTCAGGAAATCTATGGCAAGAGGGGTGTGAAAGTAGTGATGACGGGGCTCTaGCCGGCAGGGGGCGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: EPGTDWAQEIYGKRGVKVVMTGL*PAGGAR Trigger: CCTGGCGCCCCCTGCCGGCCAGAGCCCCGTCATCAC...TACTTTCACACCCCTCTTGCCATAGATTTCCTGAGCCCAATCAGTTCCGGGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CCA 90 bp | GCTCAGGAAATCTATGGCAAGAGGGGTGTGAAAGTAACCAGCGGTGGGACCCTGAGGACAGCAGGACAGTaGCCTGGCCGGCGGCGTTGT | + |
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Preference number: 4 (lower is better) Translates to: AQEIYGKRGVKVTSGGTLRTAGQ*PGRRRC Trigger: ACAACGCCGCCGGCCAGGCCACTGTCCTGCTGTCCT...CAGGGTCCCACCGCTGGTTACTTTCACACCCCTCTTGCCATAGATTTCCTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR GCA 90 bp | AGTCTGGGGCAGCGCCGTGCTTTAGCCTTCTGGAAATCAGTTGGTACCTCCCCAGATAGGCGGTTGCTGTaGCTGCGCTGTCTGGGACCT | + |
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Preference number: 4 (lower is better) Translates to: SLGQRRALAFWKSVGTSPDRRLL*LRCLGP Trigger: AGGTCCCAGACAGCGCAGGCACAGCAACCGCCTATC...TGGGGAGGTACCAACTGATTTCCAGAAGGCTAAAGCACGGCGCTGCCCCAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR GCA 90 bp | GGTGGTGGTTTGAAGGGGAGTCTGGGGCAGCGCCGTGCTTTAGCCTTCTGGAAAACAGAGATAGGCGGTTaGTGTGCCTGCGCTGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GGGLKGSLGQRRALAFWKTEIGG*CACAVW Trigger: CCAGACAGCGCAGGCACAGCAACCGCCTATCTCTGT...TTTCCAGAAGGCTAAAGCACGGCGCTGCCCCAGACTCCCCTTCAAACCACCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR GCA 90 bp | GCTCAGGAAATCTATGGCAAGAGGGGTGTGAAAGTAACCAGCGGTGGGACCCTGGCAGCCGTCCTGCAGTaGAGAGGCAGGCATCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: AQEIYGKRGVKVTSGGTLAAVLQ*RGRHLC Trigger: GCAGAGATGCCTGCCTCTGCACTGCAGGACGGCTGC...CAGGGTCCCACCGCTGGTTACTTTCACACCCCTCTTGCCATAGATTTCCTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CCA 90 bp | GGTGGTGGTTTGAAGGGGAGTCTGGGGCAGCGCCGTGCTTTAGCCTTCTGGAAACCCGCATGGTGGCCTTaGTCAATACGACCCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GGGLKGSLGQRRALAFWKPAWWP*SIRPPS Trigger: AGAAGGGGGTCGTATTGACCAAGGCCACCATGCGGG...TTTCCAGAAGGCTAAAGCACGGCGCTGCCCCAGACTCCCCTTCAAACCACCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR TCA 90 bp | GCTCAGGAAATCTATGGCAAGAGGGGTGTGAAAGTAACCAGCGGTGGGACCCTGGGGTCCTGGGATGCCTaGATGAGCTCTGATCGGTTC | + |
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Preference number: 4 (lower is better) Translates to: AQEIYGKRGVKVTSGGTLGSWDA*MSSDRF Trigger: GAACCGATCAGAGCTCATTCAGGCATCCCAGGACCC...CAGGGTCCCACCGCTGGTTACTTTCACACCCCTCTTGCCATAGATTTCCTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR GCA 90 bp | GGTGGTGGTTTGAAGGGGAGTCTGGGGCAGCGCCGTGCTTTAGCCTTCTGGAAAATGCTGACCAGCAGTTaGAAGGACAGCAGGACAGTG | + |
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Preference number: 4 (lower is better) Translates to: GGGLKGSLGQRRALAFWKMLTSS*KDSRTV Trigger: CACTGTCCTGCTGTCCTTGCAACTGCTGGTCAGCAT...TTTCCAGAAGGCTAAAGCACGGCGCTGCCCCAGACTCCCCTTCAAACCACCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CCA 90 bp | GGTGGTGGTTTGAAGGGGAGTCTGGGGCAGCGCCGTGCTTTAGCCTTCTGGAAAGAGGTGAGTTACTGCTaGGTCCTGGGATGCCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: GGGLKGSLGQRRALAFWKEVSYC*VLGCLN Trigger: ATTCAGGCATCCCAGGACCCAGCAGTAACTCACCTC...TTTCCAGAAGGCTAAAGCACGGCGCTGCCCCAGACTCCCCTTCAAACCACCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR TCA 90 bp | AGTCTGGGGCAGCGCCGTGCTTTAGCCTTCTGGAAATCAGTTGGTACCTCCCCATGTCATCTAGGGCTTTaGGTGGGGCCAGACCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: SLGQRRALAFWKSVGTSPCHLGL*VGPDQR Trigger: TCTTTGGTCTGGCCCCACTCAAAGCCCTAGATGACA...TGGGGAGGTACCAACTGATTTCCAGAAGGCTAAAGCACGGCGCTGCCCCAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR TCA 90 bp | AGTCTGGGGCAGCGCCGTGCTTTAGCCTTCTGGAAATCAGTTGGTACCTCCCCACCTCTTCAGCTGGGATaGTACCAAAGGACAGATGGA | + |
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Preference number: 4 (lower is better) Translates to: SLGQRRALAFWKSVGTSPPLQLG*YQRTDG Trigger: TCCATCTGTCCTTTGGTATCATCCCAGCTGAAGAGG...TGGGGAGGTACCAACTGATTTCCAGAAGGCTAAAGCACGGCGCTGCCCCAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR GCA 90 bp | CCCTTAGAGCTGTGGGCTGAGATGATGTCTCAACATCTGGATAAGAAAACTACCCCGTGTGTGCGTAGGTaGCGGCTGGAGAGGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: PLELWAEMMSQHLDKKTTPCVRR*RLERHA Trigger: AGCATGCCTCTCCAGCCGGCACCTACGCACACACGG...GGTAGTTTTCTTATCCAGATGTTGAGACATCATCTCAGCCCACAGCTCTAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CCA 90 bp | GGAACTGATTGGGCTCAGGAAATCTATGGCAAGAGGGGTGTGAAAGTAACCAGCTGTGCCTGCGCTGTCTaGGACCTGTCTGTCCACGTT | + |
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Preference number: 4 (lower is better) Translates to: GTDWAQEIYGKRGVKVTSCACAV*DLSVHV Trigger: AACGTGGACAGACAGGTCCCAGACAGCGCAGGCACA...GCTGGTTACTTTCACACCCCTCTTGCCATAGATTTCCTGAGCCCAATCAGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR TCA 90 bp | GGAACTGATTGGGCTCAGGAAATCTATGGCAAGAGGGGTGTGAAAGTAACCAGCCTAGCAGCAGCATGCTaGCCAGCAGTTGCAAGGACA | + |
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Preference number: 4 (lower is better) Translates to: GTDWAQEIYGKRGVKVTSLAAAC*PAVART Trigger: TGTCCTTGCAACTGCTGGTCAGCATGCTGCTGCTAG...GCTGGTTACTTTCACACCCCTCTTGCCATAGATTTCCTGAGCCCAATCAGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR GCA 90 bp | AGTCTGGGGCAGCGCCGTGCTTTAGCCTTCTGGAAATCAGTTGGTACCTCCCCACTGAGAAGACCTCATTaGCAAATGTGGTGTTGCACT | + |
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Preference number: 4 (lower is better) Translates to: SLGQRRALAFWKSVGTSPLRRPH*QMWCCT Trigger: AGTGCAACACCACATTTGGCAATGAGGTCTTCTCAG...TGGGGAGGTACCAACTGATTTCCAGAAGGCTAAAGCACGGCGCTGCCCCAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR TCA 90 bp | CCCTTAGAGCTGTGGGCTGAGATGATGTCTCAACATCTGGATAAGAAAACTACCAAGAGGCCCATGAGGTaGGTTACTGCTGGGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PLELWAEMMSQHLDKKTTKRPMR*VTAGSW Trigger: CCAGGACCCAGCAGTAACTCACCTCATGGGCCTCTT...GGTAGTTTTCTTATCCAGATGTTGAGACATCATCTCAGCCCACAGCTCTAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR GCA 90 bp | GAACCCGGAACTGATTGGGCTCAGGAAATCTATGGCAAGAGGGGTGTGAAAGTATGTGTAGCCACCAAATaGGAAGACATGGGAGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: EPGTDWAQEIYGKRGVKVCVATK*EDMGVV Trigger: GACCACTCCCATGTCTTCGCATTTGGTGGCTACACA...TACTTTCACACCCCTCTTGCCATAGATTTCCTGAGCCCAATCAGTTCCGGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CCA 90 bp | CCCTTAGAGCTGTGGGCTGAGATGATGTCTCAACATCTGGATAAGAAAACTACCGCCCCTTTAGGATCCTaGTGGCTGTCACTGTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: PLELWAEMMSQHLDKKTTAPLGS*WLSLWV Trigger: TACCCACAGTGACAGCCACCAGGATCCTAAAGGGGC...GGTAGTTTTCTTATCCAGATGTTGAGACATCATCTCAGCCCACAGCTCTAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR GCA 90 bp | CCCTTAGAGCTGTGGGCTGAGATGATGTCTCAACATCTGGATAAGAAAACTACCATCCAGGGCTTCAGCTaGCTTCTTGTTCCAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: PLELWAEMMSQHLDKKTTIQGFS*LLVPEG Trigger: GCCTTCTGGAACAAGAAGGCAGCTGAAGCCCTGGAT...GGTAGTTTTCTTATCCAGATGTTGAGACATCATCTCAGCCCACAGCTCTAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CCA 90 bp | GGAACTGATTGGGCTCAGGAAATCTATGGCAAGAGGGGTGTGAAAGTAACCAGCGCGAAGACATGGGAGTaGTCAGCAGTGATGAGTATT | + |
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Preference number: 4 (lower is better) Translates to: GTDWAQEIYGKRGVKVTSAKTWE*SAVMSI Trigger: AATACTCATCACTGCTGACCACTCCCATGTCTTCGC...GCTGGTTACTTTCACACCCCTCTTGCCATAGATTTCCTGAGCCCAATCAGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CCA 90 bp | GCTCAGGAAATCTATGGCAAGAGGGGTGTGAAAGTAACCAGCGGTGGGACCCTGCATTGCCATAGAGAATaGAGGTGTAGGATTTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: AQEIYGKRGVKVTSGGTLHCHRE*RCRICH Trigger: ATGACAAATCCTACACCTCCATTCTCTATGGCAATG...CAGGGTCCCACCGCTGGTTACTTTCACACCCCTCTTGCCATAGATTTCCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR GCA 90 bp | CTCCAGAGGAAGTCAGTTGAAAAGCAGAAGCCTAGAGTTATAAAGCAAATTATAGCTGGAGAGGCATGCTaGACCCTGGTCGTGGTCACC | + |
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Preference number: 4 (lower is better) Translates to: LQRKSVEKQKPRVIKQIIAGEAC*TLVVVT Trigger: GGTGACCACGACCAGGGTGCAGCATGCCTCTCCAGC...TATAATTTGCTTTATAACTCTAGGCTTCTGCTTTTCAACTGACTTCCTCTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CCA 90 bp | CCCTTAGAGCTGTGGGCTGAGATGATGTCTCAACATCTGGATAAGAAAACTACCCCAAATGCGAAGACATaGGAGTGGTCAGCAGTGATG | + |
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Preference number: 4 (lower is better) Translates to: PLELWAEMMSQHLDKKTTPNAKT*EWSAVM Trigger: CATCACTGCTGACCACTCCCATGTCTTCGCATTTGG...GGTAGTTTTCTTATCCAGATGTTGAGACATCATCTCAGCCCACAGCTCTAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CCA 90 bp | GAACCCGGAACTGATTGGGCTCAGGAAATCTATGGCAAGAGGGGTGTGAAAGTAATACCAAAGGACAGATaGATCCTGAGACCCAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: EPGTDWAQEIYGKRGVKVIPKDR*ILRPKN Trigger: GTTTTTGGGTCTCAGGATCCATCTGTCCTTTGGTAT...TACTTTCACACCCCTCTTGCCATAGATTTCCTGAGCCCAATCAGTTCCGGGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CCA 90 bp | GGAACTGATTGGGCTCAGGAAATCTATGGCAAGAGGGGTGTGAAAGTAACCAGCATATTTCATTTCTGTTaGCTCAAAGAGGCCCATGAG | + |
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Preference number: 4 (lower is better) Translates to: GTDWAQEIYGKRGVKVTSIFHFC*LKEAHE Trigger: CTCATGGGCCTCTTTGAGCCAACAGAAATGAAATAT...GCTGGTTACTTTCACACCCCTCTTGCCATAGATTTCCTGAGCCCAATCAGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR TCA 90 bp | CTCCAGAGGAAGTCAGTTGAAAAGCAGAAGCCTAGAGTTATAAAGCAAATTATAGTTTGCACCAGGTTCTaGTCATCCAGCCTGGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LQRKSVEKQKPRVIKQIIVCTRF*SSSLVP Trigger: TGGAACCAGGCTGGATGATCAGAACCTGGTGCAAAC...TATAATTTGCTTTATAACTCTAGGCTTCTGCTTTTCAACTGACTTCCTCTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CCA 90 bp | CCCTTAGAGCTGTGGGCTGAGATGATGTCTCAACATCTGGATAAGAAAACTACCTTTCAGCTCATAACCTaGACCATTGCCATAGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: PLELWAEMMSQHLDKKTTFQLIT*TIAIEN Trigger: ATTCTCTATGGCAATGGTCCAGGTTATGAGCTGAAA...GGTAGTTTTCTTATCCAGATGTTGAGACATCATCTCAGCCCACAGCTCTAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CCA 90 bp | CTCCAGAGGAAGTCAGTTGAAAAGCAGAAGCCTAGAGTTATAAAGCAAATTATACTGGTTACTGTCACTTaGGTACTCAGGGTCTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LQRKSVEKQKPRVIKQIILVTVT*VLRVWS Trigger: ACTCCAGACCCTGAGTACCCAAGTGACAGTAACCAG...TATAATTTGCTTTATAACTCTAGGCTTCTGCTTTTCAACTGACTTCCTCTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS CCA 90 bp | AGGACAGCAGGACAGTGGCCTGGCCGGCGGCGTTGTTTGTGGTGGTaGCCTGGCCGGCCGCGTTGTTTGTGGTGGTGGCCTGGCCCGGGG | + |
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Preference number: 5 (lower is better) Translates to: RTAGQWPGRRRCLWW*PGRPRCLWWWPGPG Trigger: CCCCGGGCCAGGCCACCACCACAAACAACGCGGCCGGCCAGGCCACCACCACAAACAACGCCGCCGGCCAGGCCACTGTCCTGCTGTCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS CCA 90 bp | AGCAGGACAGTGGCCTGGCCGGCGGCGTTGTTTGTGGTGGTGGCCTaGCCGGCCGCGTTGTTTGTGGTGGTGGCCTGGCCCGGGGTGATG | + |
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Preference number: 5 (lower is better) Translates to: SRTVAWPAALFVVVA*PAALFVVVAWPGVM Trigger: CATCACCCCGGGCCAGGCCACCACCACAAACAACGCGGCCGGCCAGGCCACCACCACAAACAACGCCGCCGGCCAGGCCACTGTCCTGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS CCA 90 bp | GTTGCAAGGACAGCAGGACAGTGGCCTGGCCGGCGGCGTTGTTTGTaGTGGTGGCCTGGCCGGCCGCGTTGTTTGTGGTGGTGGCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: VARTAGQWPGRRRCL*WWPGRPRCLWWWPG Trigger: GCCAGGCCACCACCACAAACAACGCGGCCGGCCAGGCCACCACCACAAACAACGCCGCCGGCCAGGCCACTGTCCTGCTGTCCTTGCAAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS CCA 90 bp | AGCAGCATGCTGACCAGCAGTTGCAAGGACAGCAGGACAGTGGCCTaGCCGGCGGCGTTGTTTGTGGTGGTGGCCTGGCCGGCCGCGTTG | + |
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Preference number: 5 (lower is better) Translates to: SSMLTSSCKDSRTVA*PAALFVVVAWPAAL Trigger: CAACGCGGCCGGCCAGGCCACCACCACAAACAACGCCGCCGGCCAGGCCACTGTCCTGCTGTCCTTGCAACTGCTGGTCAGCATGCTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS TCA 90 bp | CTAATCGAGCAGCTGCACTCAGGCCGATGGTCTTGTAGTTGGCCTTaGCCCCACAGAGATAGGCGGTTGCTGTGCCTGCGCTGTCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: LIEQLHSGRWSCSWP*PHRDRRLLCLRCLG Trigger: TCCCAGACAGCGCAGGCACAGCAACCGCCTATCTCTGTGGGGTCAAGGCCAACTACAAGACCATCGGCCTGAGTGCAGCTGCTCGATTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS CCA 90 bp | GGCCTTGACCCCACAGAGATAGGCGGTTGCTGTGCCTGCGCTGTCTaGGACCTGTCTGTCCACGTTGTATGTCTTGGACAGAGCCATGTA | + |
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Preference number: 5 (lower is better) Translates to: GLDPTEIGGCCACAV*DLSVHVVCLGQSHV Trigger: TACATGGCTCTGTCCAAGACATACAACGTGGACAGACAGGTCCCAGACAGCGCAGGCACAGCAACCGCCTATCTCTGTGGGGTCAAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CAA 90 bp | AGTCTGGGGCAGCGCCGTGCTTTAGCCTTCTGGAAATCAGTTGGTACCTCCCCAGGGCTCCCTGATGCTTaGACAGCCACGTTTGCACCA | + |
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Preference number: 5 (lower is better) Translates to: SLGQRRALAFWKSVGTSPGLPDA*TATFAP Trigger: TGGTGCAAACGTGGCTGTCAAAGCATCAGGGAGCCC...TGGGGAGGTACCAACTGATTTCCAGAAGGCTAAAGCACGGCGCTGCCCCAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CAA 90 bp | CCCTTAGAGCTGTGGGCTGAGATGATGTCTCAACATCTGGATAAGAAAACTACCGGCCGGCCGCGTTGTTaGTGGTGGTGGCCTGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: PLELWAEMMSQHLDKKTTGRPRC*WWWPGP Trigger: CGGGCCAGGCCACCACCACAAACAACGCGGCCGGCC...GGTAGTTTTCTTATCCAGATGTTGAGACATCATCTCAGCCCACAGCTCTAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS GCA 90 bp | CTTGTAGTTGGCCTTGACCCCACAGAGATAGGCGGTTGCTGTGCCTaGGCTGTCTGGGACCTGTCTGTCCACGTTGTATGTCTTGGACAG | + |
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Preference number: 5 (lower is better) Translates to: LVVGLDPTEIGGCCA*AVWDLSVHVVCLGQ Trigger: CTGTCCAAGACATACAACGTGGACAGACAGGTCCCAGACAGCGCAGGCACAGCAACCGCCTATCTCTGTGGGGTCAAGGCCAACTACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS CCA 90 bp | CTGTGCCTGCGCTGTCTGGGACCTGTCTGTCCACGTTGTATGTCTTaGACAGAGCCATGTATGGGAAGAGGTCCATGGCTAGGGGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: LCLRCLGPVCPRCMS*TEPCMGRGPWLGVS Trigger: AGACACCCCTAGCCATGGACCTCTTCCCATACATGGCTCTGTCCAAGACATACAACGTGGACAGACAGGTCCCAGACAGCGCAGGCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CAA 90 bp | AGTCTGGGGCAGCGCCGTGCTTTAGCCTTCTGGAAATCAGTTGGTACCTCCCCAGGGTCTGGAGTCCCCTaGGGAAACATGAACTTTCGG | + |
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Preference number: 5 (lower is better) Translates to: SLGQRRALAFWKSVGTSPGSGVP*GNMNFR Trigger: CCGAAAGTTCATGTTTCCCAAGGGGACTCCAGACCC...TGGGGAGGTACCAACTGATTTCCAGAAGGCTAAAGCACGGCGCTGCCCCAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CAA 90 bp | GGTGGTGGTTTGAAGGGGAGTCTGGGGCAGCGCCGTGCTTTAGCCTTCTGGAAAACTGGTTACTGTCACTaGGGTACTCAGGGTCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: GGGLKGSLGQRRALAFWKTGYCH*GTQGLE Trigger: CTCCAGACCCTGAGTACCCAAGTGACAGTAACCAGT...TTTCCAGAAGGCTAAAGCACGGCGCTGCCCCAGACTCCCCTTCAAACCACCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CAA 90 bp | TGGTTTGAAGGGGAGTCTGGGGCAGCGCCGTGCTTTAGCCTTCTGGAAATCAGTTCCACGTTGTATGTCTaGGACAGAGCCATGTATGGG | + |
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Preference number: 5 (lower is better) Translates to: WFEGESGAAPCFSLLEISSTLYV*DRAMYG Trigger: CCCATACATGGCTCTGTCCAAGACATACAACGTGGA...ACTGATTTCCAGAAGGCTAAAGCACGGCGCTGCCCCAGACTCCCCTTCAAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS GCA 90 bp | TGGCACGGTACATCACTGAGAAGACCTCATTGCCAAATGTGGTGTTaGACTGGTCTAATCGAGCAGCTGCACTCAGGCCGATGGTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: WHGTSLRRPHCQMWC*TGLIEQLHSGRWSC Trigger: ACAAGACCATCGGCCTGAGTGCAGCTGCTCGATTAGACCAGTGCAACACCACATTTGGCAATGAGGTCTTCTCAGTGATGTACCGTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CAA 90 bp | GCTCAGGAAATCTATGGCAAGAGGGGTGTGAAAGTAACCAGCGGTGGGACCCTGAAAGAGGTAGAAGCCTaGTGGATTCCTGCTGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: AQEIYGKRGVKVTSGGTLKEVEA*WIPAEH Trigger: ATGCTCAGCAGGAATCCACAAGGCTTCTACCTCTTT...CAGGGTCCCACCGCTGGTTACTTTCACACCCCTCTTGCCATAGATTTCCTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CAA 90 bp | GGAACTGATTGGGCTCAGGAAATCTATGGCAAGAGGGGTGTGAAAGTAACCAGCCATGCTGACCAGCAGTaGCAAGGACAGCAGGACAGT | + |
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Preference number: 5 (lower is better) Translates to: GTDWAQEIYGKRGVKVTSHADQQ*QGQQDS Trigger: ACTGTCCTGCTGTCCTTGCAACTGCTGGTCAGCATG...GCTGGTTACTTTCACACCCCTCTTGCCATAGATTTCCTGAGCCCAATCAGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CAA 90 bp | GAACCCGGAACTGATTGGGCTCAGGAAATCTATGGCAAGAGGGGTGTGAAAGTATTGTCATCTAGGGCTTaGAGTGGGGCCAGACCAAAG | + |
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Preference number: 5 (lower is better) Translates to: EPGTDWAQEIYGKRGVKVLSSRA*SGARPK Trigger: CTTTGGTCTGGCCCCACTCAAAGCCCTAGATGACAA...TACTTTCACACCCCTCTTGCCATAGATTTCCTGAGCCCAATCAGTTCCGGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CAA 90 bp | CCCTTAGAGCTGTGGGCTGAGATGATGTCTCAACATCTGGATAAGAAAACTACCACCTGTCTGTCCACGTaGTATGTCTTGGACAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: PLELWAEMMSQHLDKKTTTCLST*YVLDRA Trigger: GGCTCTGTCCAAGACATACAACGTGGACAGACAGGT...GGTAGTTTTCTTATCCAGATGTTGAGACATCATCTCAGCCCACAGCTCTAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS-3UTR CAA 90 bp | CCCTTAGAGCTGTGGGCTGAGATGATGTCTCAACATCTGGATAAGAAAACTACCGACTTCCCTGCTTTCTaGGCACGGTACATCACTGAG | + |
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Preference number: 5 (lower is better) Translates to: PLELWAEMMSQHLDKKTTDFPAF*ARYITE Trigger: CTCAGTGATGTACCGTGCCAAGAAAGCAGGGAAGTC...GGTAGTTTTCTTATCCAGATGTTGAGACATCATCTCAGCCCACAGCTCTAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS CCA 72 bp | GTGGCCTGGCCGGCCGCGTTGTTTGTGGTGGTGGCCTaGCCCGGGGTGATGACGGGGCTCTGGCCGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: VAWPAALFVVVA*PGVMTGLWPAG Trigger: CCCTGCCGGCCAGAGCCCCGTCATCACCCCGGGCCAGGCCACCACCACAAACAACGCGGCCGGCCAGGCCAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS CCA 72 bp | GGACAGTGGCCTGGCCGGCGGCGTTGTTTGTGGTGGTaGCCTGGCCGGCCGCGTTGTTTGTGGTGGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: GQWPGRRRCLWW*PGRPRCLWWWP Trigger: AGGCCACCACCACAAACAACGCGGCCGGCCAGGCCACCACCACAAACAACGCCGCCGGCCAGGCCACTGTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS CAA 72 bp | AGGACAGCAGGACAGTGGCCTGGCCGGCGGCGTTGTTaGTGGTGGTGGCCTGGCCGGCCGCGTTGTTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: RTAGQWPGRRRC*WWWPGRPRCLW Trigger: CCACAAACAACGCGGCCGGCCAGGCCACCACCACAAACAACGCCGCCGGCCAGGCCACTGTCCTGCTGTCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS CAA 90 bp | GCAGTTGCAAGGACAGCAGGACAGTGGCCTGGCCGGCGGCGTTGTTaGTGGTGGTGGCCTGGCCGGCCGCGTTGTTTGTGGTGGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: AVARTAGQWPGRRRC*WWWPGRPRCLWWWP Trigger: AGGCCACCACCACAAACAACGCGGCCGGCCAGGCCACCACCACAAACAACGCCGCCGGCCAGGCCACTGTCCTGCTGTCCTTGCAACTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS GCA 72 bp | GCTGTCCCTACTAGCAGCAGCATGCTGACCAGCAGTTaGAAGGACAGCAGGACAGTGGCCTGGCCGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: AVPTSSSMLTSS*KDSRTVAWPAA Trigger: CGCCGCCGGCCAGGCCACTGTCCTGCTGTCCTTGCAACTGCTGGTCAGCATGCTGCTGCTAGTAGGGACAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS TCA 72 bp | CAGCTGCACTCAGGCCGATGGTCTTGTAGTTGGCCTTaGCCCCACAGAGATAGGCGGTTGCTGTGCCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: QLHSGRWSCSWP*PHRDRRLLCLR Trigger: GCGCAGGCACAGCAACCGCCTATCTCTGTGGGGTCAAGGCCAACTACAAGACCATCGGCCTGAGTGCAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS GCA 72 bp | GGCCTTGACCCCACAGAGATAGGCGGTTGCTGTGCCTaGGCTGTCTGGGACCTGTCTGTCCACGTTGTATGT | + |
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Preference number: 6 (lower is better) Translates to: GLDPTEIGGCCA*AVWDLSVHVVC Trigger: ACATACAACGTGGACAGACAGGTCCCAGACAGCGCAGGCACAGCAACCGCCTATCTCTGTGGGGTCAAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS TCA 72 bp | ACACCACCATGGCTGTCCCTACTAGCAGCAGCATGCTaGCCAGCAGTTGCAAGGACAGCAGGACAGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: TPPWLSLLAAAC*PAVARTAGQWP Trigger: AGGCCACTGTCCTGCTGTCCTTGCAACTGCTGGTCAGCATGCTGCTGCTAGTAGGGACAGCCATGGTGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS CCA 72 bp | CCCACAGAGATAGGCGGTTGCTGTGCCTGCGCTGTCTaGGACCTGTCTGTCCACGTTGTATGTCTTGGACAG | + |
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Preference number: 6 (lower is better) Translates to: PTEIGGCCACAV*DLSVHVVCLGQ Trigger: CTGTCCAAGACATACAACGTGGACAGACAGGTCCCAGACAGCGCAGGCACAGCAACCGCCTATCTCTGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS CCA 72 bp | CGCTGTCTGGGACCTGTCTGTCCACGTTGTATGTCTTaGACAGAGCCATGTATGGGAAGAGGTCCATGGCTA | + |
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Preference number: 6 (lower is better) Translates to: RCLGPVCPRCMS*TEPCMGRGPWL Trigger: TAGCCATGGACCTCTTCCCATACATGGCTCTGTCCAAGACATACAACGTGGACAGACAGGTCCCAGACAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS CAA 72 bp | AGTCAGTGCCAGGTAAGCTGTGCCCGCATGGTGGCCTaGGTCAATACGACCCCCTTCTACAAAGAGGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: SQCQVSCARMVA*VNTTPFYKEVE Trigger: TTCTACCTCTTTGTAGAAGGGGGTCGTATTGACCAAGGCCACCATGCGGGCACAGCTTACCTGGCACTGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS CCA 72 bp | ACTGAGAAGACCTCATTGCCAAATGTGGTGTTGCACTaGTCTAATCGAGCAGCTGCACTCAGGCCGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: TEKTSLPNVVLH*SNRAAALRPMV Trigger: GACCATCGGCCTGAGTGCAGCTGCTCGATTAGACCAGTGCAACACCACATTTGGCAATGAGGTCTTCTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS CAA 72 bp | CTGATCGGTTCCAAACATACCGGGCTCCCTGATGCTTaGACAGCCACGTTTGCACCAGGTTCTGATCATCCA | + |
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Preference number: 6 (lower is better) Translates to: LIGSKHTGLPDA*TATFAPGSDHP Trigger: TGGATGATCAGAACCTGGTGCAAACGTGGCTGTCAAAGCATCAGGGAGCCCGGTATGTTTGGAACCGATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS CAA 90 bp | TTGGCACGGTACATCACTGAGAAGACCTCATTGCCAAATGTGGTGTaGCACTGGTCTAATCGAGCAGCTGCACTCAGGCCGATGGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LARYITEKTSLPNVV*HWSNRAAALRPMVL Trigger: CAAGACCATCGGCCTGAGTGCAGCTGCTCGATTAGACCAGTGCAACACCACATTTGGCAATGAGGTCTTCTCAGTGATGTACCGTGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS GCA 72 bp | ACATCACTGAGAAGACCTCATTGCCAAATGTGGTGTTaGACTGGTCTAATCGAGCAGCTGCACTCAGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: TSLRRPHCQMWC*TGLIEQLHSGR Trigger: TCGGCCTGAGTGCAGCTGCTCGATTAGACCAGTGCAACACCACATTTGGCAATGAGGTCTTCTCAGTGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS CAA 72 bp | TACATCACTGAGAAGACCTCATTGCCAAATGTGGTGTaGCACTGGTCTAATCGAGCAGCTGCACTCAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: YITEKTSLPNVV*HWSNRAAALRP Trigger: CGGCCTGAGTGCAGCTGCTCGATTAGACCAGTGCAACACCACATTTGGCAATGAGGTCTTCTCAGTGATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS CAA 72 bp | TGGTCAGCAGTGATGAGTATTAGCGTGTCCTTCTCATaGGTAAGCTGGCTGGCCTTTTCGATGGCAGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: WSAVMSISVSFS*VSWLAFSMAES Trigger: CGACTCTGCCATCGAAAAGGCCAGCCAGCTTACCAATGAGAAGGACACGCTAATACTCATCACTGCTGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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| CDS GCA 72 bp | GCCGGTTGCCTGATTTCAGCTCATAACCTGGACCATTaGCATAGAGAATGGAGGTGTAGGATTTGTCATCTA | + |
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Preference number: 6 (lower is better) Translates to: AGCLISAHNLDH*HREWRCRICHL Trigger: TAGATGACAAATCCTACACCTCCATTCTCTATGGCAATGGTCCAGGTTATGAGCTGAAATCAGGCAACCGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113270.3 |
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