Pregenerated sensors for ALOXE3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020892Ensembl transcript IDs: ENSMUST00000021268.9, ENSMUST00000175661.2
Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACCCTGAACACTGCTGTACTGGTCCCTCACAGCTCAGGGCACATTaGTATAATGTCAAGGCCATCGTGGTCCCATGGGCAGAGGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: HPEHCCTGPSQLRAH*YNVKAIVVPWAEEK Trigger: CTTCTCCTCTGCCCATGGGACCACGATGGCCTTGACATTATATCAATGTGCCCTGAGCTGTGAGGGACCAGTACAGCAGTGTTCAGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| 3UTR GCA 90 bp | GTAGCCATGGAGAAGGCCTCGCATAGCAAATGCGTGCACAGAAAATaGGTGTTGTTCTCGTGCACCAAAAACTCAGAGTTGCGCACCCAC | + |
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Preference number: 1 (lower is better) Translates to: VAMEKASHSKCVHRK*VLFSCTKNSELRTH Trigger: GTGGGTGCGCAACTCTGAGTTTTTGGTGCACGAGAACAACACGCATTTTCTGTGCACGCATTTGCTATGCGAGGCCTTCTCCATGGCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| 3UTR CCA 90 bp | GTCCCTCACAGCTCAGGGCACATTGATATAATGTCAAGGCCATCGTaGTCCCATGGGCAGAGGAGAAGGTCCAAACTGAGATTAAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: VPHSSGHIDIMSRPS*SHGQRRRSKLRLKR Trigger: CCTCTTTAATCTCAGTTTGGACCTTCTCCTCTGCCCATGGGACCACGATGGCCTTGACATTATATCAATGTGCCCTGAGCTGTGAGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| 3UTR CCA 90 bp | GGATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGCAACCTGATGTaGGAGAGGATTCCACACGTTAGAAGGGCATGGGTTCTATTGTGC | + |
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Preference number: 1 (lower is better) Translates to: GCGKRAQKLKLSNLM*ERIPHVRRAWVLLC Trigger: GCACAATAGAACCCATGCCCTTCTAACGTGTGGAATCCTCTCCCACATCAGGTTGCTCAGCTTGAGTTTCTGAGCTCTCTTTCCACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| 3UTR CCA 90 bp | GGCTCAAAGACAGACAATAGGATGGGAGTGGGTTTAACTGGGATGTaGAAAGAGAGCTCAGAAACTCAAGCTGAGCAACCTGATGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: GSKTDNRMGVGLTGM*KESSETQAEQPDVG Trigger: TCCCACATCAGGTTGCTCAGCTTGAGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTCTGTCTTTGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCGTGGCTCTTGCGATGGTGTTCACTTGCAGCGTGTAGCGAGTATGAGGAAGGCCTCGCATAGCAAATaGGTGCACAGAAAATGCGTG | + |
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Preference number: 2 (lower is better) Translates to: QRGSCDGVHLQRVASMRKASHSK*VHRKCV Trigger: CACGCATTTTCTGTGCACGCATTTGCTATGCGAGGC...CTTCCTCATACTCGCTACACGCTGCAAGTGAACACCATCGCAAGAGCCACGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| 3UTR-3UTR GCA 90 bp | TGCGATGGTGTTCACTTGCAGCGTGTAGCGAGTATGAGGAAGCAGGAGCTTGTACCAAAAACTCAGAGTTaGGCACCCACGTCTTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: CDGVHLQRVASMRKQELVPKTQS*APTSWP Trigger: TGGCCAAGACGTGGGTGCGCAACTCTGAGTTTTTGG...TACAAGCTCCTGCTTCCTCATACTCGCTACACGCTGCAAGTGAACACCATCGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| 3UTR CAA 90 bp | ATGGAGAAGGCCTCGCATAGCAAATGCGTGCACAGAAAATGCGTGTaGTTCTCGTGCACCAAAAACTCAGAGTTGCGCACCCACGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: MEKASHSKCVHRKCV*FSCTKNSELRTHVL Trigger: CAAGACGTGGGTGCGCAACTCTGAGTTTTTGGTGCACGAGAACAACACGCATTTTCTGTGCACGCATTTGCTATGCGAGGCCTTCTCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGAGCAGCGTGGCTCTTGCGATGGTGTTCACTTGCAGCGTGTAGCGAGTATGTGCGTGTTGTTCTCGTaGACCAAAAACTCAGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: VEQRGSCDGVHLQRVASMCVLFS*TKNSEL Trigger: CAACTCTGAGTTTTTGGTGCACGAGAACAACACGCA...CATACTCGCTACACGCTGCAAGTGAACACCATCGCAAGAGCCACGCTGCTCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| 3UTR-3UTR GCA 90 bp | GCGTGTAGCGAGTATGAGGAAGCAGGAGCTTGTAGACTGGATGACAGAGCGGCACGCATAGCAAATGCGTaGACAGAAAATGCGTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: ACSEYEEAGACRLDDRAARIANA*TENACC Trigger: ACAACACGCATTTTCTGTGCACGCATTTGCTATGCG...TGCCGCTCTGTCATCCAGTCTACAAGCTCCTGCTTCCTCATACTCGCTACACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| 3UTR-3UTR CCA 90 bp | AAGACAGACAATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGCCATCGTGGTCCCATaGGCAGAGGAGAAGGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: KTDNRMGVGLTGMWKESSAIVVP*AEEKVQ Trigger: TTGGACCTTCTCCTCTGCCCATGGGACCACGATGGC...TGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTCTGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| 3UTR TCA 72 bp | CACTGCTGTACTGGTCCCTCACAGCTCAGGGCACATTaGTATAATGTCAAGGCCATCGTGGTCCCATGGGCA | + |
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Preference number: 3 (lower is better) Translates to: HCCTGPSQLRAH*YNVKAIVVPWA Trigger: TGCCCATGGGACCACGATGGCCTTGACATTATATCAATGTGCCCTGAGCTGTGAGGGACCAGTACAGCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| 3UTR GCA 72 bp | CGCAGTGTAGCCATGGAGAAGGCCTCGCATAGCAAATaGGTGCACAGAAAATGCGTGTTGTTCTCGTGCACC | + |
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Preference number: 3 (lower is better) Translates to: RSVAMEKASHSK*VHRKCVLFSCT Trigger: GGTGCACGAGAACAACACGCATTTTCTGTGCACGCATTTGCTATGCGAGGCCTTCTCCATGGCTACACTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| 3UTR CCA 72 bp | AGCTCAGGGCACATTGATATAATGTCAAGGCCATCGTaGTCCCATGGGCAGAGGAGAAGGTCCAAACTGAGA | + |
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Preference number: 3 (lower is better) Translates to: SSGHIDIMSRPS*SHGQRRRSKLR Trigger: TCTCAGTTTGGACCTTCTCCTCTGCCCATGGGACCACGATGGCCTTGACATTATATCAATGTGCCCTGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| 3UTR GCA 72 bp | AGCAAATGCGTGCACAGAAAATGCGTGTTGTTCTCGTaGACCAAAAACTCAGAGTTGCGCACCCACGTCTTG | + |
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Preference number: 3 (lower is better) Translates to: SKCVHRKCVLFS*TKNSELRTHVL Trigger: CAAGACGTGGGTGCGCAACTCTGAGTTTTTGGTGCACGAGAACAACACGCATTTTCTGTGCACGCATTTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| 3UTR GCA 72 bp | GAGAAGGCCTCGCATAGCAAATGCGTGCACAGAAAATaGGTGTTGTTCTCGTGCACCAAAAACTCAGAGTTG | + |
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Preference number: 3 (lower is better) Translates to: EKASHSKCVHRK*VLFSCTKNSEL Trigger: CAACTCTGAGTTTTTGGTGCACGAGAACAACACGCATTTTCTGTGCACGCATTTGCTATGCGAGGCCTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGACAATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAGGTTCTATTGTGCATTaGACTTTAGTTAGCGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: TDNRMGVGLTGMWKESSEGSIVH*TLVSGF Trigger: AAAGCCGCTAACTAAAGTCAAATGCACAATAGAACC...TTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CCA 90 bp | GAGCAGCGTGGCTCTTGCGATGGTGTTCACTTGCAGCGTGTAGCGAGTATGAGGGGGGCTCTCTGGCCCTaGTGTCTGGCTGGATTGCCA | + |
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Preference number: 4 (lower is better) Translates to: EQRGSCDGVHLQRVASMRGALWP*CLAGLP Trigger: TGGCAATCCAGCCAGACACCAGGGCCAGAGAGCCCC...CCTCATACTCGCTACACGCTGCAAGTGAACACCATCGCAAGAGCCACGCTGCTC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR TCA 90 bp | ATGTCAAGGCCATCGTGGTCCCATGGGCAGAGGAGAAGGTCCAAACTGAGATTACATGCTGCCCACTATTaGCCGCAGCGTGCTGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: MSRPSWSHGQRRRSKLRLHAAHY*PQRAGR Trigger: CCGCCCAGCACGCTGCGGTCAATAGTGGGCAGCATG...TAATCTCAGTTTGGACCTTCTCCTCTGCCCATGGGACCACGATGGCCTTGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CCA 90 bp | CGTGGCTCTTGCGATGGTGTTCACTTGCAGCGTGTAGCGAGTATGAGGAAGCAGCAGCAGCACCCCCTGTaGGTTGAGCCACAACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: RGSCDGVHLQRVASMRKQQQHPL*VEPQQA Trigger: TGCCTGTTGTGGCTCAACCCACAGGGGGTGCTGCTG...CTGCTTCCTCATACTCGCTACACGCTGCAAGTGAACACCATCGCAAGAGCCACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR CCA 90 bp | CCATCGTGGTCCCATGGGCAGAGGAGAAGGTCCAAACTGAGATTAAAGAGGCCTGTCCACGAGGCCGTCTaGGTTGAGCAGCGTGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PSWSHGQRRRSKLRLKRPVHEAV*VEQRGS Trigger: AGAGCCACGCTGCTCAACCCAGACGGCCTCGTGGAC...AGGCCTCTTTAATCTCAGTTTGGACCTTCTCCTCTGCCCATGGGACCACGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR TCA 90 bp | AGCAACCTGATGTGGGAGAGGATTCCACACGTTAGAAGGGCATGGGTTCTATTGGTGTCGCCCTTGGTCTaGGGCGGAGGCTGCCTCATG | + |
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Preference number: 4 (lower is better) Translates to: SNLMWERIPHVRRAWVLLVSPLV*GGGCLM Trigger: CATGAGGCAGCCTCCGCCTCAGACCAAGGGCGACAC...CAATAGAACCCATGCCCTTCTAACGTGTGGAATCCTCTCCCACATCAGGTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR GCA 90 bp | GGCCCTAGGGAGTTAGCCTTCCCCTTAGTTGTAACTTCCTTTCCTCTGGGATGGCTGGCTGAGCTGGATTaGCAATGGCAGCAGCACCCC | + |
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Preference number: 4 (lower is better) Translates to: GPRELAFPLVVTSFPLGWLAELD*QWQQHP Trigger: GGGGTGCTGCTGCCATTGGCAATCCAGCTCAGCCAG...CCATCCCAGAGGAAAGGAAGTTACAACTAAGGGGAAGGCTAACTCCCTAGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR GCA 90 bp | CCATCGTGGTCCCATGGGCAGAGGAGAAGGTCCAAACTGAGATTAAAGAGGCCTGTAGGCATAGGGCAGTaGCAGGCTCTGGTTGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: PSWSHGQRRRSKLRLKRPVGIGQ*QALVAL Trigger: GAGCGCAACCAGAGCCTGGCACTGCCCTATGCCTAC...AGGCCTCTTTAATCTCAGTTTGGACCTTCTCCTCTGCCCATGGGACCACGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CCA 90 bp | GGCCCTAGGGAGTTAGCCTTCCCCTTAGTTGTAACTTCCTTTCCTCTGGGATGGCAGTGGGCAGAAAGATaGGGCTCTCTGGCCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: GPRELAFPLVVTSFPLGWQWAER*GSLALV Trigger: CACCAGGGCCAGAGAGCCCCATCTTTCTGCCCACTG...CCATCCCAGAGGAAAGGAAGTTACAACTAAGGGGAAGGCTAACTCCCTAGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CCA 90 bp | CCATCGTGGTCCCATGGGCAGAGGAGAAGGTCCAAACTGAGATTAAAGAGGCCTTGGGCCAGGCAGTTCTaGAAGGCTGCGATGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: PSWSHGQRRRSKLRLKRPWARQF*KAAMLC Trigger: GCAGAGCATCGCAGCCTTCCAGAACTGCCTGGCCCA...AGGCCTCTTTAATCTCAGTTTGGACCTTCTCCTCTGCCCATGGGACCACGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR TCA 90 bp | ATGTCAAGGCCATCGTGGTCCCATGGGCAGAGGAGAAGGTCCAAACTGAGATTAAGGCTGCCTCATGGATaGTGGGGCGTTGGGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: MSRPSWSHGQRRRSKLRLRLPHG*WGVGHP Trigger: TGGATGCCCAACGCCCCATCATCCATGAGGCAGCCT...TAATCTCAGTTTGGACCTTCTCCTCTGCCCATGGGACCACGATGGCCTTGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR GCA 90 bp | GGCTCTTGCGATGGTGTTCACTTGCAGCGTGTAGCGAGTATGAGGAAGCAGGAGTCCGCCAGGAAGATGTaGCCCCTCTCTAGCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: GSCDGVHLQRVASMRKQESARKM*PLSSSV Trigger: AACAGAGCTAGAGAGGGGGCACATCTTCCTGGCGGA...CTCCTGCTTCCTCATACTCGCTACACGCTGCAAGTGAACACCATCGCAAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR GCA 90 bp | TTCACCCTGAACACTGCTGTACTGGTCCCTCACAGCTCAGGGCACATTGATATAGCAGTTCTGGAAGGCTaGGATGCTCTGCCGTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: FTLNTAVLVPHSSGHIDIAVLEG*DALPWG Trigger: GCCCCACGGCAGAGCATCGCAGCCTTCCAGAACTGC...TATATCAATGTGCCCTGAGCTGTGAGGGACCAGTACAGCAGTGTTCAGGGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR GCA 90 bp | GAGCAGCGTGGCTCTTGCGATGGTGTTCACTTGCAGCGTGTAGCGAGTATGAGGGACCTCGAATCTTCATaGCAAAGGATGCAGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: EQRGSCDGVHLQRVASMRDLESS*QRMQEG Trigger: CCCTTCCTGCATCCTTTGGCATGAAGATTCGAGGTC...CCTCATACTCGCTACACGCTGCAAGTGAACACCATCGCAAGAGCCACGCTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR GCA 90 bp | CCATCGTGGTCCCATGGGCAGAGGAGAAGGTCCAAACTGAGATTAAAGAGGCCTTCCGCCAGGAAGATGTaGCCCCTCTCTAGCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: PSWSHGQRRRSKLRLKRPSARKM*PLSSSV Trigger: AACAGAGCTAGAGAGGGGGCACATCTTCCTGGCGGA...AGGCCTCTTTAATCTCAGTTTGGACCTTCTCCTCTGCCCATGGGACCACGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CCA 90 bp | CGTGCACAGAAAATGCGTGTTGTTCTCGTGCACCAAAAACTCAGAGTTGCGCACCAGTGGGCAGAAAGATaGGGCTCTCTGGCCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: RAQKMRVVLVHQKLRVAHQWAER*GSLALV Trigger: CACCAGGGCCAGAGAGCCCCATCTTTCTGCCCACTG...GTGCGCAACTCTGAGTTTTTGGTGCACGAGAACAACACGCATTTTCTGTGCACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR CCA 90 bp | GGCCCTAGGGAGTTAGCCTTCCCCTTAGTTGTAACTTCCTTTCCTCTGGGATGGAGGTCTCTGGTCCTTTaGCTCTTGGCTGACCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GPRELAFPLVVTSFPLGWRSLVL*LLADQP Trigger: TGGCTGGTCAGCCAAGAGCCAAAGGACCAGAGACCT...CCATCCCAGAGGAAAGGAAGTTACAACTAAGGGGAAGGCTAACTCCCTAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR GCA 90 bp | CGTGCACAGAAAATGCGTGTTGTTCTCGTGCACCAAAAACTCAGAGTTGCGCACTCTTCCAGGAGCCCTTaGGGTCCAGGAGACCTCGAA | + |
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Preference number: 4 (lower is better) Translates to: RAQKMRVVLVHQKLRVAHSSRSP*GPGDLE Trigger: TTCGAGGTCTCCTGGACCGCAAGGGCTCCTGGAAGA...GTGCGCAACTCTGAGTTTTTGGTGCACGAGAACAACACGCATTTTCTGTGCACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR GCA 90 bp | GGTGTTCACTTGCAGCGTGTAGCGAGTATGAGGAAGCAGGAGCTTGTAGACTGGTGGTCCCAGCAAAGGTaGCACCATGTCATTGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: GVHLQRVASMRKQELVDWWSQQR*HHVIGD Trigger: GTCACCAATGACATGGTGGCACCTTTGCTGGGACCA...CCAGTCTACAAGCTCCTGCTTCCTCATACTCGCTACACGCTGCAAGTGAACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR GCA 90 bp | TGCGATGGTGTTCACTTGCAGCGTGTAGCGAGTATGAGGAAGCAGGAGCTTGTACTGTTTGTAGGCAGGTaGCTGGTCCCAGCAAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: CDGVHLQRVASMRKQELVLFVGR*LVPAKV Trigger: CACCTTTGCTGGGACCAGGCACCTGCCTACAAACAG...TACAAGCTCCTGCTTCCTCATACTCGCTACACGCTGCAAGTGAACACCATCGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR CCA 90 bp | TGCGATGGTGTTCACTTGCAGCGTGTAGCGAGTATGAGGAAGCAGGAGCTTGTAGGTTCTTGCTGTTCCTaGCCGCAGCTCCACAGTACA | + |
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Preference number: 4 (lower is better) Translates to: CDGVHLQRVASMRKQELVGSCCS*PQLHST Trigger: TGTACTGTGGAGCTGCGGCCAGGAACAGCAAGAACC...TACAAGCTCCTGCTTCCTCATACTCGCTACACGCTGCAAGTGAACACCATCGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR CCA 90 bp | ATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGCAACCTGATGTGGGAGAGGATCAGCAGCACCCCCTGTaGGTTGAGCCACAACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: MWKESSETQAEQPDVGEDQQHPL*VEPQQA Trigger: TGCCTGTTGTGGCTCAACCCACAGGGGGTGCTGCTG...ATCCTCTCCCACATCAGGTTGCTCAGCTTGAGTTTCTGAGCTCTCTTTCCACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CCA 90 bp | GGCATGGGTTCTATTGTGCATTTGACTTTAGTTAGCGGCTTTCACCCTGAACACTTGTCGTGTCGCCCTTaGTCTGAGGCGGAGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GMGSIVHLTLVSGFHPEHLSCRP*SEAEAA Trigger: GGCAGCCTCCGCCTCAGACCAAGGGCGACACGACAA...GTGTTCAGGGTGAAAGCCGCTAACTAAAGTCAAATGCACAATAGAACCCATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CCA 90 bp | ACAGACAATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAGGCAGTGCCAGGCTCTaGTTGCGCTCCCTGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: TDNRMGVGLTGMWKESSEGSARL*LRSLMS Trigger: GGACATCAGGGAGCGCAACCAGAGCCTGGCACTGCC...TTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR TCA 90 bp | GCGTGGCTCTTGCGATGGTGTTCACTTGCAGCGTGTAGCGAGTATGAGGAAGCAAGGGGAAGAGAATCCTaGCAGATGGTTCTTGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: AWLLRWCSLAACSEYEEARGRES*QMVLAV Trigger: AACAGCAAGAACCATCTGTCAGGATTCTCTTCCCCT...TGCTTCCTCATACTCGCTACACGCTGCAAGTGAACACCATCGCAAGAGCCACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR TCA 90 bp | AAGGCCTCGCATAGCAAATGCGTGCACAGAAAATGCGTGTTGTTCTCGTGCACCTCTGACTCCATCTCCTaGAAGCTGCTGACATCCACC | + |
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Preference number: 4 (lower is better) Translates to: KASHSKCVHRKCVLFSCTSDSIS*KLLTST Trigger: GGTGGATGTCAGCAGCTTTCAGGAGATGGAGTCAGA...GGTGCACGAGAACAACACGCATTTTCTGTGCACGCATTTGCTATGCGAGGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR TCA 90 bp | TGGAGAAGGCCTCGCATAGCAAATGCGTGCACAGAAAATGCGTGTTGTTCTCGTGGCCGTCTTGGTGGCTaGGTATCGAATGTTGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: WRRPRIANACTENACCSRGRLGG*VSNVGF Trigger: GAACCCAACATTCGATACTCAGCCACCAAGACGGCC...ACGAGAACAACACGCATTTTCTGTGCACGCATTTGCTATGCGAGGCCTTCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR TCA 90 bp | ATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGCAACCTGATGTGGGAGAGGATCCACCATGTCATTGGTaGCAGGCAGCTTGCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: MWKESSETQAEQPDVGEDPPCHW*QAACWA Trigger: TGCCCAGCAAGCTGCCTGTCACCAATGACATGGTGG...ATCCTCTCCCACATCAGGTTGCTCAGCTTGAGTTTCTGAGCTCTCTTTCCACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR TCA 90 bp | ATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGCAACCTGATGTGGGAGAGGATCGTCCGAGGAACGCCTaGGCAAAAATCTCACCCACC | + |
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Preference number: 4 (lower is better) Translates to: MWKESSETQAEQPDVGEDRPRNA*AKISPT Trigger: GGTGGGTGAGATTTTTGCTCAGGCGTTCCTCGGACG...ATCCTCTCCCACATCAGGTTGCTCAGCTTGAGTTTCTGAGCTCTCTTTCCACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR TCA 90 bp | TTAACTGGGATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGCAACCTGATGTGCCGGCTTGGGAAGCCTaGACTTTCCCGTCCGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LTGMWKESSETQAEQPDVPAWEA*TFPSEE Trigger: TTCCTCGGACGGGAAAGTTCAGGCTTCCCAAGCCGG...CACATCAGGTTGCTCAGCTTGAGTTTCTGAGCTCTCTTTCCACATCCCAGTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR TCA 90 bp | TTAGCCTTCCCCTTAGTTGTAACTTCCTTTCCTCTGGGATGGCTCCAAGTGGGACCTTTGGCTCTTGGCTaGCCAGCCAGAAGAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LAFPLVVTSFPLGWLQVGPLALG*PARRGE Trigger: TTCTCCTCTTCTGGCTGGTCAGCCAAGAGCCAAAGG...TCCCACTTGGAGCCATCCCAGAGGAAAGGAAGTTACAACTAAGGGGAAGGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR TCA 90 bp | AGCAACCTGATGTGGGAGAGGATTCCACACGTTAGAAGGGCATGGGTTCTATTGTCTGGTTGCGCTCCCTaGTGTCCTTTGAGATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SNLMWERIPHVRRAWVLLSGCAP*CPLRSG Trigger: CCCAGATCTCAAAGGACATCAGGGAGCGCAACCAGA...CAATAGAACCCATGCCCTTCTAACGTGTGGAATCCTCTCCCACATCAGGTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR GCA 90 bp | GCGTGTAGCGAGTATGAGGAAGCAGGAGCTTGTAGACTGGATGACAGAGCGGCAAGTACCAAGGGTCCTTaGAGAAGAAAGCAAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ACSEYEEAGACRLDDRAASTKGP*RRKQSA Trigger: AGCGCTTTGCTTTCTTCTGCAAGGACCCTTGGTACT...TGCCGCTCTGTCATCCAGTCTACAAGCTCCTGCTTCCTCATACTCGCTACACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
||
| CDS-3UTR GCA 90 bp | TTAGCCTTCCCCTTAGTTGTAACTTCCTTTCCTCTGGGATGGCTCCAAGTGGGATGCAGTTCACAGTCCTaGTGCACAGACGCATCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LAFPLVVTSFPLGWLQVGCSSQS*CTDASL Trigger: CAGCGATGCGTCTGTGCAGCAGGACTGTGAACTGCA...TCCCACTTGGAGCCATCCCAGAGGAAAGGAAGTTACAACTAAGGGGAAGGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR GCA 90 bp | GACAATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTTCACCCACCCAGGCCTaGAGTTCACAGTCCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DNRMGVGLTGMWKESSETSPTQA*SSQSCC Trigger: GCAGCAGGACTGTGAACTGCAGGCCTGGGTGGGTGA...AGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR CCA 90 bp | AGCAACCTGATGTGGGAGAGGATTCCACACGTTAGAAGGGCATGGGTTCTATTGGGTTCTTGCTGTTCCTaGCCGCAGCTCCACAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SNLMWERIPHVRRAWVLLGSCCS*PQLHST Trigger: TGTACTGTGGAGCTGCGGCCAGGAACAGCAAGAACC...CAATAGAACCCATGCCCTTCTAACGTGTGGAATCCTCTCCCACATCAGGTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR CCA 90 bp | TGCGATGGTGTTCACTTGCAGCGTGTAGCGAGTATGAGGAAGCAGGAGCTTGTAAGTTCCCGTTTCCTGTaGTCCAGAAGGAGGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CDGVHLQRVASMRKQELVSSRFL*SRRRGR Trigger: TCTTCCCCTCCTTCTGGACCACAGGAAACGGGAACT...TACAAGCTCCTGCTTCCTCATACTCGCTACACGCTGCAAGTGAACACCATCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
||
| CDS-3UTR CCA 90 bp | CAGCGTGTAGCGAGTATGAGGAAGCAGGAGCTTGTAGACTGGATGACAGAGCGGCTGAGTATCGAATGTTaGGTTCCATGTGCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QRVASMRKQELVDWMTERLSIEC*VPCAAE Trigger: CTCTGCTGCACATGGAACCCAACATTCGATACTCAG...CCGCTCTGTCATCCAGTCTACAAGCTCCTGCTTCCTCATACTCGCTACACGCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
||
| CDS-3UTR CCA 90 bp | GCCATGGAGAAGGCCTCGCATAGCAAATGCGTGCACAGAAAATGCGTGTTGTTCGTGAGGCCGTCTTGGTaGCTGAGTATCGAATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AMEKASHSKCVHRKCVLFVRPSW*LSIECW Trigger: CCAACATTCGATACTCAGCCACCAAGACGGCCTCAC...GAACAACACGCATTTTCTGTGCACGCATTTGCTATGCGAGGCCTTCTCCATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGCAACCTGATGTGGGAGAGGATTGGATGATGGGGCGTTaGGCATCCAGGCCCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MWKESSETQAEQPDVGEDWMMGR*ASRPQS Trigger: ACTTTGGGGCCTGGATGCCCAACGCCCCATCATCCA...ATCCTCTCCCACATCAGGTTGCTCAGCTTGAGTTTCTGAGCTCTCTTTCCACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR CCA 90 bp | AATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTCAAGCGGAGGCTGCCTCATaGATGATGGGGCGTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NRMGVGLTGMWKESSETQAEAAS*MMGRWA Trigger: TGCCCAACGCCCCATCATCCATGAGGCAGCCTCCGC...TTGAGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR CCA 90 bp | CGCATAGCAAATGCGTGCACAGAAAATGCGTGTTGTTCTCGTGCACCAAAAACTGCCCTGGTGTCTGGCTaGATTGCCAATGGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RIANACTENACCSRAPKTALVSG*IANGSS Trigger: GCTGCTGCCATTGGCAATCCAGCCAGACACCAGGGC...AGTTTTTGGTGCACGAGAACAACACGCATTTTCTGTGCACGCATTTGCTATGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
||
| CDS-3UTR TCA 90 bp | TTAGCCTTCCCCTTAGTTGTAACTTCCTTTCCTCTGGGATGGCTCCAAGTGGGATCTGACTCCATCTCCTaGAAGCTGCTGACATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LAFPLVVTSFPLGWLQVGSDSIS*KLLTST Trigger: GGTGGATGTCAGCAGCTTTCAGGAGATGGAGTCAGA...TCCCACTTGGAGCCATCCCAGAGGAAAGGAAGTTACAACTAAGGGGAAGGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR TCA 90 bp | CGCATAGCAAATGCGTGCACAGAAAATGCGTGTTGTTCTCGTGCACCAAAAACTCCACCATGTCATTGGTaGCAGGCAGCTTGCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RIANACTENACCSRAPKTPPCHW*QAACWA Trigger: TGCCCAGCAAGCTGCCTGTCACCAATGACATGGTGG...AGTTTTTGGTGCACGAGAACAACACGCATTTTCTGTGCACGCATTTGCTATGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCTAGGGAGTTAGCCTTCCCCTTAGTTGTAACTTCCTTTCCTCTGGGATGGCTTCATGCCAAAGGATaGAGGAAGGGCGTTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GPRELAFPLVVTSFPLGWLHAKG*RKGVED Trigger: ATCTTCAACGCCCTTCCTGCATCCTTTGGCATGAAG...CCATCCCAGAGGAAAGGAAGTTACAACTAAGGGGAAGGCTAACTCCCTAGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR GCA 90 bp | TTAACTGGGATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGCAACCTGATGTGTCTTCCAGGAGCCCTTaGGGTCCAGGAGACCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTGMWKESSETQAEQPDVSSRSP*GPGDLE Trigger: TTCGAGGTCTCCTGGACCGCAAGGGCTCCTGGAAGA...CACATCAGGTTGCTCAGCTTGAGTTTCTGAGCTCTCTTTCCACATCCCAGTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR GCA 90 bp | ATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGCAACCTGATGTGGGAGAGGATCAGGCCCCAAAGTCATaGTGCCCACTATTGACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: MWKESSETQAEQPDVGEDQAPKS*CPLLTA Trigger: TGCGGTCAATAGTGGGCAGCATGACTTTGGGGCCTG...ATCCTCTCCCACATCAGGTTGCTCAGCTTGAGTTTCTGAGCTCTCTTTCCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR GCA 90 bp | ATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGGTTCATCTGGGTAGGTaGCCAGAGGTCTCTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MGVGLTGMWKESSETQAEVHLGR*PEVSGP Trigger: AGGACCAGAGACCTCTGGGCACCTACCCAGATGAAC...CTCAGCTTGAGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR CCA 90 bp | CCATCGTGGTCCCATGGGCAGAGGAGAAGGTCCAAACTGAGATTAAAGAGGCCTCTGAGTATCGAATGTTaGGTTCCATGTGCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSWSHGQRRRSKLRLKRPLSIEC*VPCAAE Trigger: CTCTGCTGCACATGGAACCCAACATTCGATACTCAG...AGGCCTCTTTAATCTCAGTTTGGACCTTCTCCTCTGCCCATGGGACCACGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR CCA 90 bp | TGCGATGGTGTTCACTTGCAGCGTGTAGCGAGTATGAGGAAGCAGGAGCTTGTATCAGTGAGGCCGTCTTaGTGGCTGAGTATCGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: CDGVHLQRVASMRKQELVSVRPS*WLSIEC Trigger: ACATTCGATACTCAGCCACCAAGACGGCCTCACTGA...TACAAGCTCCTGCTTCCTCATACTCGCTACACGCTGCAAGTGAACACCATCGCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
||
| CDS-3UTR CCA 90 bp | CCATCGTGGTCCCATGGGCAGAGGAGAAGGTCCAAACTGAGATTAAAGAGGCCTGAAGTGAAGGTCTTATaGCACCAGAAGATGTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PSWSHGQRRRSKLRLKRPEVKVL*HQKMFR Trigger: CCGGAACATCTTCTGGTGCCATAAGACCTTCACTTC...AGGCCTCTTTAATCTCAGTTTGGACCTTCTCCTCTGCCCATGGGACCACGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR CCA 90 bp | ATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGGTTTATGCAATGGACTaGGGCCTCCGCCAGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: MGVGLTGMWKESSETQAEVYAMD*GLRQDP Trigger: TGGATCCTGGCGGAGGCCCCAGTCCATTGCATAAAC...CTCAGCTTGAGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR CCA 90 bp | ATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGCAACCTGATGTGGGAGAGGATCAGGAGCTTGTAGACTaGATGACAGAGCGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MWKESSETQAEQPDVGEDQELVD*MTERQL Trigger: CAGCTGCCGCTCTGTCATCCAGTCTACAAGCTCCTG...ATCCTCTCCCACATCAGGTTGCTCAGCTTGAGTTTCTGAGCTCTCTTTCCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR CCA 90 bp | GACAATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTAGTGGTAGTTGGGAATaGTCAGGACGCCACGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DNRMGVGLTGMWKESSETSGSWE*SGRHEP Trigger: GGGCTCGTGGCGTCCTGACCATTCCCAACTACCACT...AGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR CCA 90 bp | AAGACAGACAATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGTGCCCAGAGGTCTCTaGTCCTTTGGCTCTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KTDNRMGVGLTGMWKESSVPRGL*SFGSWL Trigger: CAGCCAAGAGCCAAAGGACCAGAGACCTCTGGGCAC...TGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTCTGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| 3UTR CAA 72 bp | GCCTCGCATAGCAAATGCGTGCACAGAAAATGCGTGTaGTTCTCGTGCACCAAAAACTCAGAGTTGCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ASHSKCVHRKCV*FSCTKNSELRT Trigger: GGTGCGCAACTCTGAGTTTTTGGTGCACGAGAACAACACGCATTTTCTGTGCACGCATTTGCTATGCGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCAAGGCCATCGTGGTCCCATGGGCAGAGGAGAAGGTCCAAACTGAGATTAAGGGGAAGAGAATCCTaGCAGATGGTTCTTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MSRPSWSHGQRRRSKLRLRGRES*QMVLAV Trigger: AACAGCAAGAACCATCTGTCAGGATTCTCTTCCCCT...TAATCTCAGTTTGGACCTTCTCCTCTGCCCATGGGACCACGATGGCCTTGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR TCA 90 bp | GACAATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTGGCCGTCTTGGTGGCTaGGTATCGAATGTTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DNRMGVGLTGMWKESSETGRLGG*VSNVGF Trigger: GAACCCAACATTCGATACTCAGCCACCAAGACGGCC...AGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR TCA 90 bp | TTCACCCTGAACACTGCTGTACTGGTCCCTCACAGCTCAGGGCACATTGATATACTCGGTGACGTACTCTaGAGTGAAGGTCTTATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FTLNTAVLVPHSSGHIDILGDVL*SEGLMA Trigger: TGCCATAAGACCTTCACTTCAGAGTACGTCACCGAG...TATATCAATGTGCCCTGAGCTGTGAGGGACCAGTACAGCAGTGTTCAGGGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR TCA 90 bp | TTAACTGGGATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGCAACCTGATGTGCTCCCTGATGTCCTTTaGGATCTGGGCCAGGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTGMWKESSETQAEQPDVLPDVL*DLGQAV Trigger: AACTGCCTGGCCCAGATCTCAAAGGACATCAGGGAG...CACATCAGGTTGCTCAGCTTGAGTTTCTGAGCTCTCTTTCCACATCCCAGTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR GCA 90 bp | ATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGCAACCTGATGTGGGAGAGGATTGGTCCCAGCAAAGGTaGCACCATGTCATTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: MWKESSETQAEQPDVGEDWSQQR*HHVIGD Trigger: GTCACCAATGACATGGTGGCACCTTTGCTGGGACCA...ATCCTCTCCCACATCAGGTTGCTCAGCTTGAGTTTCTGAGCTCTCTTTCCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR GCA 90 bp | TTAACTGGGATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGCAACCTGATGTGCTGTTTGTAGGCAGGTaGCTGGTCCCAGCAAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTGMWKESSETQAEQPDVLFVGR*LVPAKV Trigger: CACCTTTGCTGGGACCAGGCACCTGCCTACAAACAG...CACATCAGGTTGCTCAGCTTGAGTTTCTGAGCTCTCTTTCCACATCCCAGTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR GCA 90 bp | TTCACCCTGAACACTGCTGTACTGGTCCCTCACAGCTCAGGGCACATTGATATAGCCTCGCATAGCAAATaGGTGCACAGAAAATGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: FTLNTAVLVPHSSGHIDIASHSK*VHRKCV Trigger: CACGCATTTTCTGTGCACGCATTTGCTATGCGAGGC...TATATCAATGTGCCCTGAGCTGTGAGGGACCAGTACAGCAGTGTTCAGGGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR GCA 90 bp | ACAGACAATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAGAGCAGCGTGGCTCTTaGGATGGTGTTCACTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TDNRMGVGLTGMWKESSEEQRGS*DGVHLQ Trigger: CTGCAAGTGAACACCATCGCAAGAGCCACGCTGCTC...TTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR CCA 90 bp | CGATGGTGTTCACTTGCAGCGTGTAGCGAGTATGAGGAAGCAGGAGCTTGTAGATCAGGTAGGAACCAGTaGTCACACACAGCCGATATA | + |
|
Preference number: 4 (lower is better) Translates to: RWCSLAACSEYEEAGACRSGRNQ*SHTADI Trigger: TATATCGGCTGTGTGTGACCACTGGTTCCTACCTGA...TCTACAAGCTCCTGCTTCCTCATACTCGCTACACGCTGCAAGTGAACACCATCG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
||
| CDS-3UTR CCA 90 bp | TCGCATAGCAAATGCGTGCACAGAAAATGCGTGTTGTTCTCGTGCACCAAAAACGTTTATGCAATGGACTaGGGCCTCCGCCAGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SHSKCVHRKCVLFSCTKNVYAMD*GLRQDP Trigger: TGGATCCTGGCGGAGGCCCCAGTCCATTGCATAAAC...GTTTTTGGTGCACGAGAACAACACGCATTTTCTGTGCACGCATTTGCTATGCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
||
| CDS-3UTR CCA 90 bp | AAGACAGACAATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCATCTGGCCCTGGTGTCTaGCTGAGCTGGATTGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KTDNRMGVGLTGMWKESSSGPGV*LSWIAN Trigger: ATTGGCAATCCAGCTCAGCCAGACACCAGGGCCAGA...TGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTCTGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR CCA 90 bp | ACAGACAATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAACTCGGTAGTGGTAGTTaGGAATGGTCAGGACGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TDNRMGVGLTGMWKESSELGSGS*EWSGRH Trigger: GTGGCGTCCTGACCATTCCCAACTACCACTACCGAG...TTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR CCA 90 bp | TTAGCCTTCCCCTTAGTTGTAACTTCCTTTCCTCTGGGATGGCTCCAAGTGGGAATGTCCTTTGAGATCTaGGCCAGGCAGTTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LAFPLVVTSFPLGWLQVGMSFEI*ARQFWK Trigger: CTTCCAGAACTGCCTGGCCCAGATCTCAAAGGACAT...TCCCACTTGGAGCCATCCCAGAGGAAAGGAAGTTACAACTAAGGGGAAGGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR TCA 90 bp | ATGCGTGCACAGAAAATGCGTGTTGTTCTCGTGCACCAAAAACTCAGAGTTGCGCTCGGTGACGTACTCTaGAGTGAAGGTCTTATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MRAQKMRVVLVHQKLRVALGDVL*SEGLMA Trigger: TGCCATAAGACCTTCACTTCAGAGTACGTCACCGAG...CGCAACTCTGAGTTTTTGGTGCACGAGAACAACACGCATTTTCTGTGCACGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCTCGCATAGCAAATGCGTGCACAGAAAATGCGTGTTGTTCTCGTGCACCAAGATGTTATCCAATGTaGCAGCCTTCAGGTAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RPRIANACTENACCSRAPRCYPM*QPSGRN Trigger: GTTCCTACCTGAAGGCTGGCACATTGGATAACATCT...TGGTGCACGAGAACAACACGCATTTTCTGTGCACGCATTTGCTATGCGAGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
||
| CDS-3UTR GCA 90 bp | TTAGCCTTCCCCTTAGTTGTAACTTCCTTTCCTCTGGGATGGCTCCAAGTGGGAAGTACCAAGGGTCCTTaGAGAAGAAAGCAAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LAFPLVVTSFPLGWLQVGSTKGP*RRKQSA Trigger: AGCGCTTTGCTTTCTTCTGCAAGGACCCTTGGTACT...TCCCACTTGGAGCCATCCCAGAGGAAAGGAAGTTACAACTAAGGGGAAGGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR GCA 90 bp | TTAACTGGGATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGCAACCTGATGTGCCAAAAACTCAGAGTTaGGCACCCACGTCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTGMWKESSETQAEQPDVPKTQS*APTSWP Trigger: TGGCCAAGACGTGGGTGCGCAACTCTGAGTTTTTGG...CACATCAGGTTGCTCAGCTTGAGTTTCTGAGCTCTCTTTCCACATCCCAGTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR CCA 90 bp | GACAATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTGTGAGGCCGTCTTGGTaGCTGAGTATCGAATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DNRMGVGLTGMWKESSETVRPSW*LSIECW Trigger: CCAACATTCGATACTCAGCCACCAAGACGGCCTCAC...AGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR TCA 90 bp | TTCACCCTGAACACTGCTGTACTGGTCCCTCACAGCTCAGGGCACATTGATATAAAACACTGTTCTCAATaGGTGGAGGATCCAAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FTLNTAVLVPHSSGHIDIKHCSQ*VEDPSR Trigger: CCTACTTGGATCCTCCACTCATTGAGAACAGTGTTT...TATATCAATGTGCCCTGAGCTGTGAGGGACCAGTACAGCAGTGTTCAGGGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR GCA 90 bp | GACAATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTGACCTCGAATCTTCATaGCAAAGGATGCAGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DNRMGVGLTGMWKESSETDLESS*QRMQEG Trigger: CCCTTCCTGCATCCTTTGGCATGAAGATTCGAGGTC...AGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR GCA 90 bp | AAGACAGACAATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCATGCGTGCACAGAAAATaGGTGTTGTTCTCGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KTDNRMGVGLTGMWKESSCVHRK*VLFSCT Trigger: GGTGCACGAGAACAACACGCATTTTCTGTGCACGCA...TGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTCTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CCA 90 bp | ATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGTCAGGTAGGAACCAGTaGTCACACACAGCCGATATA | + |
|
Preference number: 4 (lower is better) Translates to: MGVGLTGMWKESSETQAESGRNQ*SHTADI Trigger: TATATCGGCTGTGTGTGACCACTGGTTCCTACCTGA...CTCAGCTTGAGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CCA 90 bp | GACAATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTGAGAATCCTGACAGATaGTTCTTGCTGTTCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DNRMGVGLTGMWKESSETENPDR*FLLFLA Trigger: GGCCAGGAACAGCAAGAACCATCTGTCAGGATTCTC...AGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CCA 90 bp | AATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTCAAAGTTCCCGTTTCCTGTaGTCCAGAAGGAGGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NRMGVGLTGMWKESSETQSSRFL*SRRRGR Trigger: TCTTCCCCTCCTTCTGGACCACAGGAAACGGGAACT...TTGAGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CCA 90 bp | GGCATGGGTTCTATTGTGCATTTGACTTTAGTTAGCGGCTTTCACCCTGAACACTCAGTGAGGCCGTCTTaGTGGCTGAGTATCGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: GMGSIVHLTLVSGFHPEHSVRPS*WLSIEC Trigger: ACATTCGATACTCAGCCACCAAGACGGCCTCACTGA...GTGTTCAGGGTGAAAGCCGCTAACTAAAGTCAAATGCACAATAGAACCCATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR GCA 90 bp | ATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGCAACCTGATGTGGGAGAGGATCGCATAGCAAATGCGTaGACAGAAAATGCGTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MWKESSETQAEQPDVGEDRIANA*TENACC Trigger: ACAACACGCATTTTCTGTGCACGCATTTGCTATGCG...ATCCTCTCCCACATCAGGTTGCTCAGCTTGAGTTTCTGAGCTCTCTTTCCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR GCA 90 bp | ATGTCAAGGCCATCGTGGTCCCATGGGCAGAGGAGAAGGTCCAAACTGAGATTAGCAATTAAAGATGATTaGGGTGAGATACTTCACGAG | + |
|
Preference number: 4 (lower is better) Translates to: MSRPSWSHGQRRRSKLRLAIKDD*GEILHE Trigger: CTCGTGAAGTATCTCACCGCAATCATCTTTAATTGC...TAATCTCAGTTTGGACCTTCTCCTCTGCCCATGGGACCACGATGGCCTTGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CCA 90 bp | TCGCATAGCAAATGCGTGCACAGAAAATGCGTGTTGTTCTCGTGCACCAAAAACGAAGTGAAGGTCTTATaGCACCAGAAGATGTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SHSKCVHRKCVLFSCTKNEVKVL*HQKMFR Trigger: CCGGAACATCTTCTGGTGCCATAAGACCTTCACTTC...GTTTTTGGTGCACGAGAACAACACGCATTTTCTGTGCACGCATTTGCTATGCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR GCA 90 bp | GGCATGGGTTCTATTGTGCATTTGACTTTAGTTAGCGGCTTTCACCCTGAACACAGATGTTATCCAATGTaGCAGCCTTCAGGTAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GMGSIVHLTLVSGFHPEHRCYPM*QPSGRN Trigger: GTTCCTACCTGAAGGCTGGCACATTGGATAACATCT...GTGTTCAGGGTGAAAGCCGCTAACTAAAGTCAAATGCACAATAGAACCCATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CCA 90 bp | ATGTCAAGGCCATCGTGGTCCCATGGGCAGAGGAGAAGGTCCAAACTGAGATTACACAAGGTACTGTCTTaGTCAAGGCAAATTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: MSRPSWSHGQRRRSKLRLHKVLS*SRQISY Trigger: ATAAGAAATTTGCCTTGACCAAGACAGTACCTTGTG...TAATCTCAGTTTGGACCTTCTCCTCTGCCCATGGGACCACGATGGCCTTGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CCA 90 bp | GCCATGGAGAAGGCCTCGCATAGCAAATGCGTGCACAGAAAATGCGTGTTGTTCCACAAGGTACTGTCTTaGTCAAGGCAAATTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AMEKASHSKCVHRKCVLFHKVLS*SRQISY Trigger: ATAAGAAATTTGCCTTGACCAAGACAGTACCTTGTG...GAACAACACGCATTTTCTGTGCACGCATTTGCTATGCGAGGCCTTCTCCATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR TCA 90 bp | GACAATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTGGCAAATTTCTTATCTaGCTCCATCTCCTGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DNRMGVGLTGMWKESSETGKFLI*LHLLKA Trigger: AGCTTTCAGGAGATGGAGTCAGATAAGAAATTTGCC...AGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR GCA 90 bp | AATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTCAATGCGTGTTGTTCTCGTaGACCAAAAACTCAGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NRMGVGLTGMWKESSETQCVLFS*TKNSEL Trigger: CAACTCTGAGTTTTTGGTGCACGAGAACAACACGCA...TTGAGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CCA 90 bp | AATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTCAAGCACAGACGCATCGCTaGGATAATAGTAACTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: NRMGVGLTGMWKESSETQAQTHR*DNSNSQ Trigger: TTGTGAGTTACTATTATCCCAGCGATGCGTCTGTGC...TTGAGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CCA 90 bp | AAGACAGACAATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAACTGTTCTCAATGAGTaGAGGATCCAAGTAGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: KTDNRMGVGLTGMWKESSTVLNE*RIQVGI Trigger: TATGCCTACTTGGATCCTCCACTCATTGAGAACAGT...TGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTCTGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CCA 90 bp | GGCAGTGCCAGGCTCTGGTTGCGCTCCCTGATGTCCTTTGAGATCTaGGCCAGGCAGTTCTGGAAGGCTGCGATGCTCTGCCGTGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSARLWLRSLMSFEI*ARQFWKAAMLCRGA Trigger: GGCCCCACGGCAGAGCATCGCAGCCTTCCAGAACTGCCTGGCCCAGATCTCAAAGGACATCAGGGAGCGCAACCAGAGCCTGGCACTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS TCA 90 bp | CACAGCCGGCTTGGGAAGCCTGAACTTTCCCGTCCGAGGAACGCCTaGGCAAAAATCTCACCCACCCAGGCCTGCAGTTCACAGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HSRLGKPELSRPRNA*AKISPTQACSSQSC Trigger: GCAGGACTGTGAACTGCAGGCCTGGGTGGGTGAGATTTTTGCTCAGGCGTTCCTCGGACGGGAAAGTTCAGGCTTCCCAAGCCGGCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CCA 90 bp | GAGGGGCGCTGTTACGTACTGTTGGAGACCGTTTATGCAATGGACTaGGGCCTCCGCCAGGATCCAGTAGTCCGCCAGGAAGATGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EGRCYVLLETVYAMD*GLRQDPVVRQEDVP Trigger: GGGCACATCTTCCTGGCGGACTACTGGATCCTGGCGGAGGCCCCAGTCCATTGCATAAACGGTCTCCAACAGTACGTAACAGCGCCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS GCA 90 bp | CGTGACCTTGTCCACGAGGCCGTCTGGGTTGAGCAGCGTGGCTCTTaGGATGGTGTTCACTTGCAGCGTGTAGCGAGTATGAGGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RDLVHEAVWVEQRGS*DGVHLQRVASMRKQ Trigger: CTGCTTCCTCATACTCGCTACACGCTGCAAGTGAACACCATCGCAAGAGCCACGCTGCTCAACCCAGACGGCCTCGTGGACAAGGTCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CCA 90 bp | TGTGGGTTGAGCCACAACAGGCAGAGGGGCGCTGTTACGTACTGTTaGAGACCGTTTATGCAATGGACTGGGGCCTCCGCCAGGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CGLSHNRQRGAVTYC*RPFMQWTGASARIQ Trigger: CTGGATCCTGGCGGAGGCCCCAGTCCATTGCATAAACGGTCTCCAACAGTACGTAACAGCGCCCCTCTGCCTGTTGTGGCTCAACCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CCA 90 bp | CCGCCCAGATCTTCAGGCCGTCGTCTCGGTAGTGGTAGTTGGGAATaGTCAGGACGCCACGAGCCCGTATGCTATCCGGTAGGCAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PPRSSGRRLGSGSWE*SGRHEPVCYPVGRN Trigger: ATTTCTGCCTACCGGATAGCATACGGGCTCGTGGCGTCCTGACCATTCCCAACTACCACTACCGAGACGACGGCCTGAAGATCTGGGCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CAA 90 bp | GCGTGTAGCGAGTATGAGGAAGCAGGAGCTTGTAGACTGGATGACAGAGCGGCACTCTTCCAGGAGCCCTaGCGGTCCAGGAGACCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: ACSEYEEAGACRLDDRAALFQEP*RSRRPR Trigger: TCGAGGTCTCCTGGACCGCAAGGGCTCCTGGAAGAG...TGCCGCTCTGTCATCCAGTCTACAAGCTCCTGCTTCCTCATACTCGCTACACGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR CAA 90 bp | GCAGCGTGTAGCGAGTATGAGGAAGCAGGAGCTTGTAGACTGGATGACAGAGCGGATGCAGGAAGGGCGTaGAAGATCAGTGAGGCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: AACSEYEEAGACRLDDRADAGRA*KISEAV Trigger: GACGGCCTCACTGATCTTCAACGCCCTTCCTGCATC...CGCTCTGTCATCCAGTCTACAAGCTCCTGCTTCCTCATACTCGCTACACGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR CAA 90 bp | GCGTGTAGCGAGTATGAGGAAGCAGGAGCTTGTAGACTGGATGACAGAGCGGCAGGTGCCACCATGTCATaGGTGACAGGCAGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ACSEYEEAGACRLDDRAAGATMS*VTGSLL Trigger: CAGCAAGCTGCCTGTCACCAATGACATGGTGGCACC...TGCCGCTCTGTCATCCAGTCTACAAGCTCCTGCTTCCTCATACTCGCTACACGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS TCA 90 bp | TCCACTGGTAGCAGGGAAAGTGGACAGCAGAGCCATCGGGGGCAGTaGCACAGATTCGACTGCAGTACCAAGGGTCCTTGCAGAAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: STGSRESGQQSHRGQ*HRFDCSTKGPCRRK Trigger: CTTTCTTCTGCAAGGACCCTTGGTACTGCAGTCGAATCTGTGTCACTGCCCCCGATGGCTCTGCTGTCCACTTTCCCTGCTACCAGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS GCA 90 bp | ACCAGAAGATGTTCCGGATGTCGTCCAGCCTCTTCCAGGAGCCCTTaGGGTCCAGGAGACCTCGAATCTTCATGCCAAAGGATGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TRRCSGCRPASSRSP*GPGDLESSCQRMQE Trigger: TTCCTGCATCCTTTGGCATGAAGATTCGAGGTCTCCTGGACCGCAAGGGCTCCTGGAAGAGGCTGGACGACATCCGGAACATCTTCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS-3UTR CAA 90 bp | GGCCCTAGGGAGTTAGCCTTCCCCTTAGTTGTAACTTCCTTTCCTCTGGGATGGCCTGACAGATGGTTCTaGCTGTTCCTGGCCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPRELAFPLVVTSFPLGWPDRWF*LFLAAA Trigger: AGCTGCGGCCAGGAACAGCAAGAACCATCTGTCAGG...CCATCCCAGAGGAAAGGAAGTTACAACTAAGGGGAAGGCTAACTCCCTAGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CAA 90 bp | TGGAGAAGGCCTCGCATAGCAAATGCGTGCACAGAAAATGCGTGTTGTTCTCGTAGCACCCCCTGTGGGTaGAGCCACAACAGGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WRRPRIANACTENACCSRSTPCG*SHNRQR Trigger: CCTCTGCCTGTTGTGGCTCAACCCACAGGGGGTGCT...ACGAGAACAACACGCATTTTCTGTGCACGCATTTGCTATGCGAGGCCTTCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR CAA 90 bp | ATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGCAACCTGATGTGGGAGAGGATACGAGGCCGTCTGGGTaGAGCAGCGTGGCTCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: MWKESSETQAEQPDVGEDTRPSG*SSVALA Trigger: CGCAAGAGCCACGCTGCTCAACCCAGACGGCCTCGT...ATCCTCTCCCACATCAGGTTGCTCAGCTTGAGTTTCTGAGCTCTCTTTCCACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CCA 90 bp | CAGAAGGAGGGGAAGAGAATCCTGACAGATGGTTCTTGCTGTTCCTaGCCGCAGCTCCACAGTACAGTAGCCATCGATCCACTGGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QKEGKRILTDGSCCS*PQLHSTVAIDPLVA Trigger: TGCTACCAGTGGATCGATGGCTACTGTACTGTGGAGCTGCGGCCAGGAACAGCAAGAACCATCTGTCAGGATTCTCTTCCCCTCCTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CCA 90 bp | ATCCAGGCCCCAAAGTCATGCTGCCCACTATTGACCGCAGCGTGCTaGGCGGAGCAATTAAAGATGATTGCGGTGAGATACTTCACGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IQAPKSCCPLLTAAC*AEQLKMIAVRYFTS Trigger: GCTCGTGAAGTATCTCACCGCAATCATCTTTAATTGCTCCGCCCAGCACGCTGCGGTCAATAGTGGGCAGCATGACTTTGGGGCCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CAA 90 bp | GAGAAGGCCTCGCATAGCAAATGCGTGCACAGAAAATGCGTGTTGTTCTCGTGCCCTGACAGATGGTTCTaGCTGTTCCTGGCCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EKASHSKCVHRKCVLFSCPDRWF*LFLAAA Trigger: AGCTGCGGCCAGGAACAGCAAGAACCATCTGTCAGG...GCACGAGAACAACACGCATTTTCTGTGCACGCATTTGCTATGCGAGGCCTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR CAA 90 bp | CGTGGCTCTTGCGATGGTGTTCACTTGCAGCGTGTAGCGAGTATGAGGAAGCAGATCAGTGAGGCCGTCTaGGTGGCTGAGTATCGAATG | + |
|
Preference number: 5 (lower is better) Translates to: RGSCDGVHLQRVASMRKQISEAV*VAEYRM Trigger: CATTCGATACTCAGCCACCAAGACGGCCTCACTGAT...CTGCTTCCTCATACTCGCTACACGCTGCAAGTGAACACCATCGCAAGAGCCACG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR CAA 90 bp | ATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGCTCTTCCAGGAGCCCTaGCGGTCCAGGAGACCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: MGVGLTGMWKESSETQAELFQEP*RSRRPR Trigger: TCGAGGTCTCCTGGACCGCAAGGGCTCCTGGAAGAG...CTCAGCTTGAGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CAA 90 bp | ATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGTCATGCTGCCCACTATaGACCGCAGCGTGCTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: MGVGLTGMWKESSETQAESCCPL*TAACWA Trigger: CGCCCAGCACGCTGCGGTCAATAGTGGGCAGCATGA...CTCAGCTTGAGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS TCA 90 bp | CCAGGAGACCTCGAATCTTCATGCCAAAGGATGCAGGAAGGGCGTTaGAGATCAGTGAGGCCGTCTTGGTGGCTGAGTATCGAATGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PGDLESSCQRMQEGR*RSVRPSWWLSIECW Trigger: CCAACATTCGATACTCAGCCACCAAGACGGCCTCACTGATCTTCAACGCCCTTCCTGCATCCTTTGGCATGAAGATTCGAGGTCTCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CCA 90 bp | TCCTCACACCAATGCTCGGTGACGTACTCTGAAGTGAAGGTCTTATaGCACCAGAAGATGTTCCGGATGTCGTCCAGCCTCTTCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSHQCSVTYSEVKVL*HQKMFRMSSSLFQE Trigger: CTCCTGGAAGAGGCTGGACGACATCCGGAACATCTTCTGGTGCCATAAGACCTTCACTTCAGAGTACGTCACCGAGCATTGGTGTGAGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS-3UTR CAA 90 bp | GGCATGGGTTCTATTGTGCATTTGACTTTAGTTAGCGGCTTTCACCCTGAACACAGCACCCCCTGTGGGTaGAGCCACAACAGGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GMGSIVHLTLVSGFHPEHSTPCG*SHNRQR Trigger: CCTCTGCCTGTTGTGGCTCAACCCACAGGGGGTGCT...GTGTTCAGGGTGAAAGCCGCTAACTAAAGTCAAATGCACAATAGAACCCATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CAA 90 bp | ATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGCAACCTGATGTGGGAGAGGATATGGATGATGGGGCGTaGGGCATCCAGGCCCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: MWKESSETQAEQPDVGEDMDDGA*GIQAPK Trigger: CTTTGGGGCCTGGATGCCCAACGCCCCATCATCCAT...ATCCTCTCCCACATCAGGTTGCTCAGCTTGAGTTTCTGAGCTCTCTTTCCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS TCA 90 bp | GGTACTGTCTTGGTCAAGGCAAATTTCTTATCTGACTCCATCTCCTaGAAGCTGCTGACATCCACCATCCGAGGGAAGCCAGGGGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GTVLVKANFLSDSIS*KLLTSTIRGKPGAK Trigger: CTTCGCCCCTGGCTTCCCTCGGATGGTGGATGTCAGCAGCTTTCAGGAGATGGAGTCAGATAAGAAATTTGCCTTGACCAAGACAGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS GCA 90 bp | AGTGAGGCCGTCTTGGTGGCTGAGTATCGAATGTTGGGTTCCATGTaGAGCAGAGATGGGATGTCAATCTTCATAGGAAAGCCAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SEAVLVAEYRMLGSM*SRDGMSIFIGKPGR Trigger: CCTGCCTGGCTTTCCTATGAAGATTGACATCCCATCTCTGCTGCACATGGAACCCAACATTCGATACTCAGCCACCAAGACGGCCTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS-3UTR CAA 90 bp | GAGAAGGCCTCGCATAGCAAATGCGTGCACAGAAAATGCGTGTTGTTCTCGTGCCAGTACCAAGGGTCCTaGCAGAAGAAAGCAAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: EKASHSKCVHRKCVLFSCQYQGS*QKKAKR Trigger: GCGCTTTGCTTTCTTCTGCAAGGACCCTTGGTACTG...GCACGAGAACAACACGCATTTTCTGTGCACGCATTTGCTATGCGAGGCCTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
||
| CDS-3UTR CAA 90 bp | CCATCGTGGTCCCATGGGCAGAGGAGAAGGTCCAAACTGAGATTAAAGAGGCCTGCTGAGTATCGAATGTaGGGTTCCATGTGCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PSWSHGQRRRSKLRLKRPAEYRM*GSMCSR Trigger: TCTGCTGCACATGGAACCCAACATTCGATACTCAGC...AGGCCTCTTTAATCTCAGTTTGGACCTTCTCCTCTGCCCATGGGACCACGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR CAA 90 bp | AATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTCAAGGGTGCACAGCCGGCTaGGGAAGCCTGAACTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NRMGVGLTGMWKESSETQGCTAG*GSLNFP Trigger: GGGAAAGTTCAGGCTTCCCAAGCCGGCTGTGCACCC...TTGAGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
||
| CDS-3UTR CAA 90 bp | AAGGCCTCGCATAGCAAATGCGTGCACAGAAAATGCGTGTTGTTCTCGTGCACCGCTGAGTATCGAATGTaGGGTTCCATGTGCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KASHSKCVHRKCVLFSCTAEYRM*GSMCSR Trigger: TCTGCTGCACATGGAACCCAACATTCGATACTCAGC...GGTGCACGAGAACAACACGCATTTTCTGTGCACGCATTTGCTATGCGAGGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS-3UTR CAA 90 bp | GACAATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTGATGCAGGAAGGGCGTaGAAGATCAGTGAGGCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: DNRMGVGLTGMWKESSETDAGRA*KISEAV Trigger: GACGGCCTCACTGATCTTCAACGCCCTTCCTGCATC...AGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CAA 90 bp | ATGTGGAAAGAGAGCTCAGAAACTCAAGCTGAGCAACCTGATGTGGGAGAGGATATCAGTGAGGCCGTCTaGGTGGCTGAGTATCGAATG | + |
|
Preference number: 5 (lower is better) Translates to: MWKESSETQAEQPDVGEDISEAV*VAEYRM Trigger: CATTCGATACTCAGCCACCAAGACGGCCTCACTGAT...ATCCTCTCCCACATCAGGTTGCTCAGCTTGAGTTTCTGAGCTCTCTTTCCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CAA 90 bp | AATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCAGAAACTCAAGGTGCCACCATGTCATaGGTGACAGGCAGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NRMGVGLTGMWKESSETQGATMS*VTGSLL Trigger: CAGCAAGCTGCCTGTCACCAATGACATGGTGGCACC...TTGAGTTTCTGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CAA 90 bp | GGCATGGGTTCTATTGTGCATTTGACTTTAGTTAGCGGCTTTCACCCTGAACACCAGTACCAAGGGTCCTaGCAGAAGAAAGCAAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GMGSIVHLTLVSGFHPEHQYQGS*QKKAKR Trigger: GCGCTTTGCTTTCTTCTGCAAGGACCCTTGGTACTG...GTGTTCAGGGTGAAAGCCGCTAACTAAAGTCAAATGCACAATAGAACCCATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CAA 90 bp | AAGACAGACAATAGGATGGGAGTGGGTTTAACTGGGATGTGGAAAGAGAGCTCATGCGATGGTGTTCACTaGCAGCGTGTAGCGAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: KTDNRMGVGLTGMWKESSCDGVH*QRVASM Trigger: CATACTCGCTACACGCTGCAAGTGAACACCATCGCA...TGAGCTCTCTTTCCACATCCCAGTTAAACCCACTCCCATCCTATTGTCTGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS-3UTR CAA 90 bp | ATGTCAAGGCCATCGTGGTCCCATGGGCAGAGGAGAAGGTCCAAACTGAGATTAGCACAAGGTACTGTCTaGGTCAAGGCAAATTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: MSRPSWSHGQRRRSKLRLAQGTV*VKANFL Trigger: TAAGAAATTTGCCTTGACCAAGACAGTACCTTGTGC...TAATCTCAGTTTGGACCTTCTCCTCTGCCCATGGGACCACGATGGCCTTGACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CCA 72 bp | GGGCTCTCTGGCCCTGGTGTCTGGCTGGATTGCCAATaGCAGCAGCACCCCCTGTGGGTTGAGCCACAACAG | + |
|
Preference number: 6 (lower is better) Translates to: GLSGPGVWLDCQ*QQHPLWVEPQQ Trigger: CTGTTGTGGCTCAACCCACAGGGGGTGCTGCTGCCATTGGCAATCCAGCCAGACACCAGGGCCAGAGAGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS CCA 72 bp | GCTGAGCTGGATTGCCAATGGCAGCAGCACCCCCTGTaGGTTGAGCCACAACAGGCAGAGGGGCGCTGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: AELDCQWQQHPL*VEPQQAEGRCY Trigger: GTAACAGCGCCCCTCTGCCTGTTGTGGCTCAACCCACAGGGGGTGCTGCTGCCATTGGCAATCCAGCTCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CCA 72 bp | CTCTGGCCCTGGTGTCTGGCTGAGCTGGATTGCCAATaGCAGCAGCACCCCCTGTGGGTTGAGCCACAACAG | + |
|
Preference number: 6 (lower is better) Translates to: LWPWCLAELDCQ*QQHPLWVEPQQ Trigger: CTGTTGTGGCTCAACCCACAGGGGGTGCTGCTGCCATTGGCAATCCAGCTCAGCCAGACACCAGGGCCAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CAA 72 bp | GGCTGGATTGCCAATGGCAGCAGCACCCCCTGTGGGTaGAGCCACAACAGGCAGAGGGGCGCTGTTACGTAC | + |
|
Preference number: 6 (lower is better) Translates to: GWIANGSSTPCG*SHNRQRGAVTY Trigger: GTACGTAACAGCGCCCCTCTGCCTGTTGTGGCTCAACCCACAGGGGGTGCTGCTGCCATTGGCAATCCAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS TCA 72 bp | GCTGGATTGCCAATGGCAGCAGCACCCCCTGTGGGTTaGGCCACAACAGGCAGAGGGGCGCTGTTACGTACT | + |
|
Preference number: 6 (lower is better) Translates to: AGLPMAAAPPVG*ATTGRGALLRT Trigger: AGTACGTAACAGCGCCCCTCTGCCTGTTGTGGCTCAACCCACAGGGGGTGCTGCTGCCATTGGCAATCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CCA 72 bp | CCTACCGATGGACGTGACCTTGTCCACGAGGCCGTCTaGGTTGAGCAGCGTGGCTCTTGCGATGGTGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PTDGRDLVHEAV*VEQRGSCDGVH Trigger: GTGAACACCATCGCAAGAGCCACGCTGCTCAACCCAGACGGCCTCGTGGACAAGGTCACGTCCATCGGTAGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CAA 72 bp | AGCTGGATTGCCAATGGCAGCAGCACCCCCTGTGGGTaGAGCCACAACAGGCAGAGGGGCGCTGTTACGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SWIANGSSTPCG*SHNRQRGAVTY Trigger: GTACGTAACAGCGCCCCTCTGCCTGTTGTGGCTCAACCCACAGGGGGTGCTGCTGCCATTGGCAATCCAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CAA 72 bp | CCGATGGACGTGACCTTGTCCACGAGGCCGTCTGGGTaGAGCAGCGTGGCTCTTGCGATGGTGTTCACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PMDVTLSTRPSG*SSVALAMVFTC Trigger: GCAAGTGAACACCATCGCAAGAGCCACGCTGCTCAACCCAGACGGCCTCGTGGACAAGGTCACGTCCATCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CAA 72 bp | GATACTTCACGAGCTCTCCTGGGGTGCACAGCCGGCTaGGGAAGCCTGAACTTTCCCGTCCGAGGAACGCCT | + |
|
Preference number: 6 (lower is better) Translates to: DTSRALLGCTAG*GSLNFPVRGTP Trigger: AGGCGTTCCTCGGACGGGAAAGTTCAGGCTTCCCAAGCCGGCTGTGCACCCCAGGAGAGCTCGTGAAGTATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CAA 90 bp | GTCTGGCTGAGCTGGATTGCCAATGGCAGCAGCACCCCCTGTGGGTaGAGCCACAACAGGCAGAGGGGCGCTGTTACGTACTGTTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VWLSWIANGSSTPCG*SHNRQRGAVTYCWR Trigger: TCTCCAACAGTACGTAACAGCGCCCCTCTGCCTGTTGTGGCTCAACCCACAGGGGGTGCTGCTGCCATTGGCAATCCAGCTCAGCCAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CAA 90 bp | CTGGTGTCTGGCTGGATTGCCAATGGCAGCAGCACCCCCTGTGGGTaGAGCCACAACAGGCAGAGGGGCGCTGTTACGTACTGTTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LVSGWIANGSSTPCG*SHNRQRGAVTYCWR Trigger: TCTCCAACAGTACGTAACAGCGCCCCTCTGCCTGTTGTGGCTCAACCCACAGGGGGTGCTGCTGCCATTGGCAATCCAGCCAGACACCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175661.2 |
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| CDS GCA 72 bp | GTCCACGAGGCCGTCTGGGTTGAGCAGCGTGGCTCTTaGGATGGTGTTCACTTGCAGCGTGTAGCGAGTATG | + |
|
Preference number: 6 (lower is better) Translates to: VHEAVWVEQRGS*DGVHLQRVASM Trigger: CATACTCGCTACACGCTGCAAGTGAACACCATCGCAAGAGCCACGCTGCTCAACCCAGACGGCCTCGTGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CCA 72 bp | AGCCACAACAGGCAGAGGGGCGCTGTTACGTACTGTTaGAGACCGTTTATGCAATGGACTGGGGCCTCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SHNRQRGAVTYC*RPFMQWTGASA Trigger: GGCGGAGGCCCCAGTCCATTGCATAAACGGTCTCCAACAGTACGTAACAGCGCCCCTCTGCCTGTTGTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CAA 72 bp | GAGCCACAACAGGCAGAGGGGCGCTGTTACGTACTGTaGGAGACCGTTTATGCAATGGACTGGGGCCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: EPQQAEGRCYVL*ETVYAMDWGLR Trigger: GCGGAGGCCCCAGTCCATTGCATAAACGGTCTCCAACAGTACGTAACAGCGCCCCTCTGCCTGTTGTGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CAA 90 bp | CATCCGAGGGAAGCCAGGGGCGAAGATCTTCCAGCGATAACATTCTaGGCGGGCTTGGAGTTCCCGTTTCCTGTGGTCCAGAAGGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: HPREARGEDLPAITF*AGLEFPFPVVQKEG Trigger: CCCCTCCTTCTGGACCACAGGAAACGGGAACTCCAAGCCCGCCAAGAATGTTATCGCTGGAAGATCTTCGCCCCTGGCTTCCCTCGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CAA 90 bp | CTGTGGGTTGAGCCACAACAGGCAGAGGGGCGCTGTTACGTACTGTaGGAGACCGTTTATGCAATGGACTGGGGCCTCCGCCAGGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: LWVEPQQAEGRCYVL*ETVYAMDWGLRQDP Trigger: TGGATCCTGGCGGAGGCCCCAGTCCATTGCATAAACGGTCTCCAACAGTACGTAACAGCGCCCCTCTGCCTGTTGTGGCTCAACCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CAA 90 bp | GAGGCCGTCTGGGTTGAGCAGCGTGGCTCTTGCGATGGTGTTCACTaGCAGCGTGTAGCGAGTATGAGGAAGCAGGAGCTTGTAGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: EAVWVEQRGSCDGVH*QRVASMRKQELVDW Trigger: CCAGTCTACAAGCTCCTGCTTCCTCATACTCGCTACACGCTGCAAGTGAACACCATCGCAAGAGCCACGCTGCTCAACCCAGACGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS TCA 72 bp | AGCAGGGAAAGTGGACAGCAGAGCCATCGGGGGCAGTaGCACAGATTCGACTGCAGTACCAAGGGTCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SRESGQQSHRGQ*HRFDCSTKGPC Trigger: GCAAGGACCCTTGGTACTGCAGTCGAATCTGTGTCACTGCCCCCGATGGCTCTGCTGTCCACTTTCCCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS GCA 72 bp | TGTTCCGGATGTCGTCCAGCCTCTTCCAGGAGCCCTTaGGGTCCAGGAGACCTCGAATCTTCATGCCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: CSGCRPASSRSP*GPGDLESSCQR Trigger: CCTTTGGCATGAAGATTCGAGGTCTCCTGGACCGCAAGGGCTCCTGGAAGAGGCTGGACGACATCCGGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CCA 72 bp | TCTTCAGGCCGTCGTCTCGGTAGTGGTAGTTGGGAATaGTCAGGACGCCACGAGCCCGTATGCTATCCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SSGRRLGSGSWE*SGRHEPVCYPV Trigger: TACCGGATAGCATACGGGCTCGTGGCGTCCTGACCATTCCCAACTACCACTACCGAGACGACGGCCTGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CCA 72 bp | CCCAGATCTTCAGGCCGTCGTCTCGGTAGTGGTAGTTaGGAATGGTCAGGACGCCACGAGCCCGTATGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: PRSSGRRLGSGS*EWSGRHEPVCY Trigger: ATAGCATACGGGCTCGTGGCGTCCTGACCATTCCCAACTACCACTACCGAGACGACGGCCTGAAGATCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CAA 72 bp | TGTTCACCTCTGGGAGGGTGTCTAGGTAACTCTTCATaGTCGTGTCGCCCTTGGTCTGAGGCGGAGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: CSPLGGCLGNSS*SCRPWSEAEAA Trigger: GGCAGCCTCCGCCTCAGACCAAGGGCGACACGACAATGAAGAGTTACCTAGACACCCTCCCAGAGGTGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CAA 90 bp | CACCAGAAGATGTTCCGGATGTCGTCCAGCCTCTTCCAGGAGCCCTaGCGGTCCAGGAGACCTCGAATCTTCATGCCAAAGGATGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HQKMFRMSSSLFQEP*RSRRPRIFMPKDAG Trigger: TCCTGCATCCTTTGGCATGAAGATTCGAGGTCTCCTGGACCGCAAGGGCTCCTGGAAGAGGCTGGACGACATCCGGAACATCTTCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS TCA 72 bp | CGTTTCCTGTGGTCCAGAAGGAGGGGAAGAGAATCCTaGCAGATGGTTCTTGCTGTTCCTGGCCGCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RFLWSRRRGRES*QMVLAVPGRSS Trigger: GGAGCTGCGGCCAGGAACAGCAAGAACCATCTGTCAGGATTCTCTTCCCCTCCTTCTGGACCACAGGAAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS TCA 72 bp | CTTGGGAAGCCTGAACTTTCCCGTCCGAGGAACGCCTaGGCAAAAATCTCACCCACCCAGGCCTGCAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LGKPELSRPRNA*AKISPTQACSS Trigger: TGAACTGCAGGCCTGGGTGGGTGAGATTTTTGCTCAGGCGTTCCTCGGACGGGAAAGTTCAGGCTTCCCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS GCA 72 bp | CCAGAGGCGAAGTCCCTGCCTACGCGATCCAGCTTCTaGTTAGGGCTTTCACCACAGGTGCCTACCAATGTA | + |
|
Preference number: 6 (lower is better) Translates to: PEAKSLPTRSSF*LGLSPQVPTNV Trigger: TACATTGGTAGGCACCTGTGGTGAAAGCCCTAAGCAGAAGCTGGATCGCGTAGGCAGGGACTTCGCCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS GCA 72 bp | AGATGTGCCCCCTCTCTAGCTCTGTTTGTAGGCAGGTaGCTGGTCCCAGCAAAGGTGCCACCATGTCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: RCAPSLALFVGR*LVPAKVPPCHW Trigger: CCAATGACATGGTGGCACCTTTGCTGGGACCAGGCACCTGCCTACAAACAGAGCTAGAGAGGGGGCACATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CAA 72 bp | GGCGAAGATCTTCCAGCGATAACATTCTTGGCGGGCTaGGAGTTCCCGTTTCCTGTGGTCCAGAAGGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GEDLPAITFLAG*EFPFPVVQKEG Trigger: CCCCTCCTTCTGGACCACAGGAAACGGGAACTCCAAGCCCGCCAAGAATGTTATCGCTGGAAGATCTTCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CAA 72 bp | GAAGCCAGGGGCGAAGATCTTCCAGCGATAACATTCTaGGCGGGCTTGGAGTTCCCGTTTCCTGTGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EARGEDLPAITF*AGLEFPFPVVQ Trigger: CTGGACCACAGGAAACGGGAACTCCAAGCCCGCCAAGAATGTTATCGCTGGAAGATCTTCGCCCCTGGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CAA 72 bp | ATGTTCCGGATGTCGTCCAGCCTCTTCCAGGAGCCCTaGCGGTCCAGGAGACCTCGAATCTTCATGCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: MFRMSSSLFQEP*RSRRPRIFMPK Trigger: CTTTGGCATGAAGATTCGAGGTCTCCTGGACCGCAAGGGCTCCTGGAAGAGGCTGGACGACATCCGGAACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CAA 90 bp | GAAGCCAGGGGCGAAGATCTTCCAGCGATAACATTCTTGGCGGGCTaGGAGTTCCCGTTTCCTGTGGTCCAGAAGGAGGGGAAGAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: EARGEDLPAITFLAG*EFPFPVVQKEGKRI Trigger: GATTCTCTTCCCCTCCTTCTGGACCACAGGAAACGGGAACTCCAAGCCCGCCAAGAATGTTATCGCTGGAAGATCTTCGCCCCTGGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS GCA 72 bp | GCCCCAAAGTCATGCTGCCCACTATTGACCGCAGCGTaGTGGGCGGAGCAATTAAAGATGATTGCGGTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: APKSCCPLLTAA*WAEQLKMIAVR Trigger: TCTCACCGCAATCATCTTTAATTGCTCCGCCCAGCACGCTGCGGTCAATAGTGGGCAGCATGACTTTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CCA 72 bp | TGTGGTCCAGAAGGAGGGGAAGAGAATCCTGACAGATaGTTCTTGCTGTTCCTGGCCGCAGCTCCACAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: CGPEGGEENPDR*FLLFLAAAPQY Trigger: GTACTGTGGAGCTGCGGCCAGGAACAGCAAGAACCATCTGTCAGGATTCTCTTCCCCTCCTTCTGGACCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CCA 72 bp | TGTTACGTACTGTTGGAGACCGTTTATGCAATGGACTaGGGCCTCCGCCAGGATCCAGTAGTCCGCCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CYVLLETVYAMD*GLRQDPVVRQE Trigger: TTCCTGGCGGACTACTGGATCCTGGCGGAGGCCCCAGTCCATTGCATAAACGGTCTCCAACAGTACGTAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CAA 72 bp | TGGGTTGAGCAGCGTGGCTCTTGCGATGGTGTTCACTaGCAGCGTGTAGCGAGTATGAGGAAGCAGGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: WVEQRGSCDGVH*QRVASMRKQEL Trigger: AAGCTCCTGCTTCCTCATACTCGCTACACGCTGCAAGTGAACACCATCGCAAGAGCCACGCTGCTCAACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CAA 72 bp | TGGGTAGGTGCCCAGAGGTCTCTGGTCCTTTGGCTCTaGGCTGACCAGCCAGAAGAGGAGAAGGTTTCTACA | + |
|
Preference number: 6 (lower is better) Translates to: WVGAQRSLVLWL*ADQPEEEKVST Trigger: TGTAGAAACCTTCTCCTCTTCTGGCTGGTCAGCCAAGAGCCAAAGGACCAGAGACCTCTGGGCACCTACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CCA 72 bp | GGGAAGAGAATCCTGACAGATGGTTCTTGCTGTTCCTaGCCGCAGCTCCACAGTACAGTAGCCATCGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: GKRILTDGSCCS*PQLHSTVAIDP Trigger: TGGATCGATGGCTACTGTACTGTGGAGCTGCGGCCAGGAACAGCAAGAACCATCTGTCAGGATTCTCTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CAA 72 bp | GATGCAGGAAGGGCGTTGAAGATCAGTGAGGCCGTCTaGGTGGCTGAGTATCGAATGTTGGGTTCCATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: DAGRALKISEAV*VAEYRMLGSMC Trigger: GCACATGGAACCCAACATTCGATACTCAGCCACCAAGACGGCCTCACTGATCTTCAACGCCCTTCCTGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS TCA 72 bp | CTCGAATCTTCATGCCAAAGGATGCAGGAAGGGCGTTaGAGATCAGTGAGGCCGTCTTGGTGGCTGAGTATC | + |
|
Preference number: 6 (lower is better) Translates to: LESSCQRMQEGR*RSVRPSWWLSI Trigger: GATACTCAGCCACCAAGACGGCCTCACTGATCTTCAACGCCCTTCCTGCATCCTTTGGCATGAAGATTCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CCA 72 bp | CAATGCTCGGTGACGTACTCTGAAGTGAAGGTCTTATaGCACCAGAAGATGTTCCGGATGTCGTCCAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QCSVTYSEVKVL*HQKMFRMSSSL Trigger: GAGGCTGGACGACATCCGGAACATCTTCTGGTGCCATAAGACCTTCACTTCAGAGTACGTCACCGAGCATTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CCA 72 bp | CCAAAGTCATGCTGCCCACTATTGACCGCAGCGTGCTaGGCGGAGCAATTAAAGATGATTGCGGTGAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: PKSCCPLLTAAC*AEQLKMIAVRY Trigger: GTATCTCACCGCAATCATCTTTAATTGCTCCGCCCAGCACGCTGCGGTCAATAGTGGGCAGCATGACTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS CAA 90 bp | ATGCCAAAGGATGCAGGAAGGGCGTTGAAGATCAGTGAGGCCGTCTaGGTGGCTGAGTATCGAATGTTGGGTTCCATGTGCAGCAGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: MPKDAGRALKISEAV*VAEYRMLGSMCSRD Trigger: ATCTCTGCTGCACATGGAACCCAACATTCGATACTCAGCCACCAAGACGGCCTCACTGATCTTCAACGCCCTTCCTGCATCCTTTGGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CAA 90 bp | TCCAGGAGACCTCGAATCTTCATGCCAAAGGATGCAGGAAGGGCGTaGAAGATCAGTGAGGCCGTCTTGGTGGCTGAGTATCGAATGTTG | + |
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Preference number: 6 (lower is better) Translates to: SRRPRIFMPKDAGRA*KISEAVLVAEYRML Trigger: CAACATTCGATACTCAGCCACCAAGACGGCCTCACTGATCTTCAACGCCCTTCCTGCATCCTTTGGCATGAAGATTCGAGGTCTCCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CAA 72 bp | TTCATAGGAAAGCCAGGCAGGTACCGGTTCCCAGAGTaGTCATCCTGTTCTGCACAAGGTACTGTCTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: FIGKPGRYRFPE*SSCSAQGTVLV Trigger: GACCAAGACAGTACCTTGTGCAGAACAGGATGACAACTCTGGGAACCGGTACCTGCCTGGCTTTCCTATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CAA 72 bp | ATCAGTGAGGCCGTCTTGGTGGCTGAGTATCGAATGTaGGGTTCCATGTGCAGCAGAGATGGGATGTCAATC | + |
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Preference number: 6 (lower is better) Translates to: ISEAVLVAEYRM*GSMCSRDGMSI Trigger: GATTGACATCCCATCTCTGCTGCACATGGAACCCAACATTCGATACTCAGCCACCAAGACGGCCTCACTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CAA 90 bp | GCGTTGAAGATCAGTGAGGCCGTCTTGGTGGCTGAGTATCGAATGTaGGGTTCCATGTGCAGCAGAGATGGGATGTCAATCTTCATAGGA | + |
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Preference number: 6 (lower is better) Translates to: ALKISEAVLVAEYRM*GSMCSRDGMSIFIG Trigger: TCCTATGAAGATTGACATCCCATCTCTGCTGCACATGGAACCCAACATTCGATACTCAGCCACCAAGACGGCCTCACTGATCTTCAACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CCA 72 bp | CCTGCAGTTCACAGTCCTGCTGCACAGACGCATCGCTaGGATAATAGTAACTCACAATCTCTGAGACAAACC | + |
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Preference number: 6 (lower is better) Translates to: PAVHSPAAQTHR*DNSNSQSLRQT Trigger: GGTTTGTCTCAGAGATTGTGAGTTACTATTATCCCAGCGATGCGTCTGTGCAGCAGGACTGTGAACTGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021268.9 |
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| CDS GCA 72 bp | AGGCAGGTACCGGTTCCCAGAGTTGTCATCCTGTTCTaGACAAGGTACTGTCTTGGTCAAGGCAAATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: RQVPVPRVVILF*TRYCLGQGKFL Trigger: AAGAAATTTGCCTTGACCAAGACAGTACCTTGTGCAGAACAGGATGACAACTCTGGGAACCGGTACCTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CAA 72 bp | CCAGAGTTGTCATCCTGTTCTGCACAAGGTACTGTCTaGGTCAAGGCAAATTTCTTATCTGACTCCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: PELSSCSAQGTV*VKANFLSDSIS Trigger: GGAGATGGAGTCAGATAAGAAATTTGCCTTGACCAAGACAGTACCTTGTGCAGAACAGGATGACAACTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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| CDS CCA 72 bp | CAGAGTTGTCATCCTGTTCTGCACAAGGTACTGTCTTaGTCAAGGCAAATTTCTTATCTGACTCCATCTCCT | + |
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Preference number: 6 (lower is better) Translates to: QSCHPVLHKVLS*SRQISYLTPSP Trigger: AGGAGATGGAGTCAGATAAGAAATTTGCCTTGACCAAGACAGTACCTTGTGCAGAACAGGATGACAACTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021268.9 ENSMUST00000175661.2 |
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