RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALOX5AP (Mus musculus)

Ensembl gene IDs: ENSMUSG00000060063

Ensembl transcript IDs: ENSMUST00000071130.5

Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCCACAGAGCCCCGAGGGCAGCAAGATTGACAGCATCTACAGCTTaGAGAGGAGCAGAAGCCTTCGCGGCGTTGCGTTATGATGCGTCT +
Preference number: 1 (lower is better)
Translates to: CHRAPRAARLTASTA*RGAEAFAALRYDAS
Trigger: AGACGCATCATAACGCAACGCCGCGAAGGCTTCTGCTCCTCTTCAAGCTGTAGATGCTGTCAATCTTGCTGCCCTCGGGGCTCTGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
3UTR-3UTR GCA 90 bp GTTGAAGAAACACTAATAGCTAATACAGAAATATCACCCCAATCTGAGCCATGGAAGCCTTCGCGGCGTTaGGTTATGATGCGTCTCTAT +
Preference number: 2 (lower is better)
Translates to: VEETLIANTEISPQSEPWKPSRR*VMMRLY
Trigger: ATAGAGACGCATCATAACGCAACGCCGCGAAGGCTT...CCATGGCTCAGATTGGGGTGATATTTCTGTATTAGCTATTAGTGTTTCTTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
3UTR TCA 72 bp TTAACGGATGCCACAGAGCCCCGAGGGCAGCAAGATTaGCAGCATCTACAGCTTGAAGAGGAGCAGAAGCCT +
Preference number: 3 (lower is better)
Translates to: LTDATEPRGQQD*QHLQLEEEQKP
Trigger: AGGCTTCTGCTCCTCTTCAAGCTGTAGATGCTGTCAATCTTGCTGCCCTCGGGGCTCTGTGGCATCCGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
3UTR-3UTR CAA 90 bp TCAGAAAGCAGGATAAGCCAGGAGAAGTATAGGCTGGATGTAGACAATAAATCCGACAGCATCTACAGCTaGAAGAGGAGCAGAAGCCTT +
Preference number: 3 (lower is better)
Translates to: SESRISQEKYRLDVDNKSDSIYS*KRSRSL
Trigger: AAGGCTTCTGCTCCTCTTCAAGCTGTAGATGCTGTC...GGATTTATTGTCTACATCCAGCCTATACTTCTCCTGGCTTATCCTGCTTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
3UTR TCA 72 bp TTTGTCTATACCCTTTATTTTAGGAAAACACGTGTCTaGTTACAAGACATCTTCAGAAAGCAGGATAAGCCA +
Preference number: 3 (lower is better)
Translates to: FVYTLYFRKTRV*LQDIFRKQDKP
Trigger: TGGCTTATCCTGCTTTCTGAAGATGTCTTGTAATCAGACACGTGTTTTCCTAAAATAAAGGGTATAGACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS-3UTR CCA 90 bp CCTGGGCCACCGCCGCATTCGAGGGGTGGAGCTAGCACAAGACATTTTTCTTCCGCAAAGAACGCATTCTaGACCACGCTGATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: PGPPPHSRGGASTRHFSSAKNAF*TTLMRV
Trigger: CACCCTCATCAGCGTGGTCCAGAATGCGTTCTTTGC...GGAAGAAAAATGTCTTGTGCTAGCTCCACCCCTCGAATGCGGCGGTGGCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS-3UTR CCA 90 bp CCTGGGCCACCGCCGCATTCGAGGGGTGGAGCTAGCACAAGACATTTTTCTTCCCTACGCAGTTCTGGTTaGCAGTGTAGACCCGCTCAA +
Preference number: 4 (lower is better)
Translates to: PGPPPHSRGGASTRHFSSLRSSG*QCRPAQ
Trigger: TTGAGCGGGTCTACACTGCCAACCAGAACTGCGTAG...GGAAGAAAAATGTCTTGTGCTAGCTCCACCCCTCGAATGCGGCGGTGGCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
3UTR CAA 72 bp AGCCCCGAGGGCAGCAAGATTGACAGCATCTACAGCTaGAAGAGGAGCAGAAGCCTTCGCGGCGTTGCGTTA +
Preference number: 4 (lower is better)
Translates to: SPEGSKIDSIYS*KRSRSLRGVAL
Trigger: TAACGCAACGCCGCGAAGGCTTCTGCTCCTCTTCAAGCTGTAGATGCTGTCAATCTTGCTGCCCTCGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS-3UTR CCA 90 bp TATAGGCTGGATGTAGACAATAAATCCTGGGCCACCGCCGCATTCGAGGGGTGGAAGGCGGCAGGGACTTaGCTGCAAAGTAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: YRLDVDNKSWATAAFEGWKAAGT*LQSSPA
Trigger: TGCAGGACTACTTTGCAGCCAAGTCCCTGCCGCCTT...CCACCCCTCGAATGCGGCGGTGGCCCAGGATTTATTGTCTACATCCAGCCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS-3UTR GCA 90 bp ATAAGCCAGGAGAAGTATAGGCTGGATGTAGACAATAAATCCTGGGCCACCGCCCCAGGAGCACAACGTTaGCCACAGCCTCTTGATCCA +
Preference number: 4 (lower is better)
Translates to: ISQEKYRLDVDNKSWATAPGAQR*PQPLDP
Trigger: TGGATCAAGAGGCTGTGGGCAACGTTGTGCTCCTGG...GGCGGTGGCCCAGGATTTATTGTCTACATCCAGCCTATACTTCTCCTGGCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS-3UTR GCA 90 bp TATAGGCTGGATGTAGACAATAAATCCTGGGCCACCGCCGCATTCGAGGGGTGGAAGCTTCTCCCATTATaGGCCTTGCTTTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: YRLDVDNKSWATAAFEGWKLLPL*ALLSCS
Trigger: GGAGCATGAAAGCAAGGCGCATAATGGGAGAAGCTT...CCACCCCTCGAATGCGGCGGTGGCCCAGGATTTATTGTCTACATCCAGCCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS-3UTR CCA 90 bp ATAAGCCAGGAGAAGTATAGGCTGGATGTAGACAATAAATCCTGGGCCACCGCCAGAGTCCCGGTCCTCTaGAAGCTTCTCCCATTATGC +
Preference number: 4 (lower is better)
Translates to: ISQEKYRLDVDNKSWATARVPVL*KLLPLC
Trigger: GCATAATGGGAGAAGCTTCCAGAGGACCGGGACTCT...GGCGGTGGCCCAGGATTTATTGTCTACATCCAGCCTATACTTCTCCTGGCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS-3UTR CCA 90 bp ATAAGCCAGGAGAAGTATAGGCTGGATGTAGACAATAAATCCTGGGCCACCGCCTCATGCTCCACCTTGTaGGCAAAGAACGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: ISQEKYRLDVDNKSWATASCSTL*AKNAFW
Trigger: CCAGAATGCGTTCTTTGCCCACAAGGTGGAGCATGA...GGCGGTGGCCCAGGATTTATTGTCTACATCCAGCCTATACTTCTCCTGGCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS-3UTR CCA 90 bp ATAAGCCAGGAGAAGTATAGGCTGGATGTAGACAATAAATCCTGGGCCACCGCCGTACCACAAGGAAAGTaGGGTACGCATCTACGCAGT +
Preference number: 4 (lower is better)
Translates to: ISQEKYRLDVDNKSWATAVPQGK*GTHLRS
Trigger: ACTGCGTAGATGCGTACCCCACTTTCCTTGTGGTAC...GGCGGTGGCCCAGGATTTATTGTCTACATCCAGCCTATACTTCTCCTGGCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS-3UTR GCA 90 bp CCCTTTATTTTAGGAAAACACGTGTCTGATTACAAGACATCTTCAGAAAGCAGGCCGACAAAGTATTTTTaGCTCACAAACAGGTACATC +
Preference number: 4 (lower is better)
Translates to: PFILGKHVSDYKTSSESRPTKYF*LTNRYI
Trigger: GATGTACCTGTTTGTGAGGCAAAAATACTTTGTCGG...CCTGCTTTCTGAAGATGTCTTGTAATCAGACACGTGTTTTCCTAAAATAAAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS GCA 90 bp GTCCCGGTCCTCTGGAAGCTTCTCCCATTATGCGCCTTGCTTTCATaGTCCACCTTGTGGGCAAAGAACGCATTCTGGACCACGCTGATG +
Preference number: 5 (lower is better)
Translates to: VPVLWKLLPLCALLS*STLWAKNAFWTTLM
Trigger: CATCAGCGTGGTCCAGAATGCGTTCTTTGCCCACAAGGTGGAGCATGAAAGCAAGGCGCATAATGGGAGAAGCTTCCAGAGGACCGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS GCA 90 bp AGGCAAGAGTCCCGGTCCTCTGGAAGCTTCTCCCATTATGCGCCTTaGTTTCATGCTCCACCTTGTGGGCAAAGAACGCATTCTGGACCA +
Preference number: 5 (lower is better)
Translates to: RQESRSSGSFSHYAP*FHAPPCGQRTHSGP
Trigger: TGGTCCAGAATGCGTTCTTTGCCCACAAGGTGGAGCATGAAAGCAAGGCGCATAATGGGAGAAGCTTCCAGAGGACCGGGACTCTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS CCA 90 bp CTTGGCTGCAAAGTAGTCCTGCAGTCCAGAGTACCACAAGGAAAGTaGGGTACGCATCTACGCAGTTCTGGTTGGCAGTGTAGACCCGCT +
Preference number: 5 (lower is better)
Translates to: LGCKVVLQSRVPQGK*GTHLRSSGWQCRPA
Trigger: AGCGGGTCTACACTGCCAACCAGAACTGCGTAGATGCGTACCCCACTTTCCTTGTGGTACTCTGGACTGCAGGACTACTTTGCAGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS CCA 90 bp TGGAAGCTTCTCCCATTATGCGCCTTGCTTTCATGCTCCACCTTGTaGGCAAAGAACGCATTCTGGACCACGCTGATGAGGGTGACAAGG +
Preference number: 5 (lower is better)
Translates to: WKLLPLCALLSCSTL*AKNAFWTTLMRVTR
Trigger: CCTTGTCACCCTCATCAGCGTGGTCCAGAATGCGTTCTTTGCCCACAAGGTGGAGCATGAAAGCAAGGCGCATAATGGGAGAAGCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS-3UTR CAA 90 bp CCCTTTATTTTAGGAAAACACGTGTCTGATTACAAGACATCTTCAGAAAGCAGGCTTTCATGCTCCACCTaGTGGGCAAAGAACGCATTC +
Preference number: 5 (lower is better)
Translates to: PFILGKHVSDYKTSSESRLSCST*WAKNAF
Trigger: GAATGCGTTCTTTGCCCACAAGGTGGAGCATGAAAG...CCTGCTTTCTGAAGATGTCTTGTAATCAGACACGTGTTTTCCTAAAATAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS-3UTR CAA 90 bp GTTGAAGAAACACTAATAGCTAATACAGAAATATCACCCCAATCTGAGCCATGGGCCGACAAAGTATTTTaGCCTCACAAACAGGTACAT +
Preference number: 5 (lower is better)
Translates to: VEETLIANTEISPQSEPWADKVF*PHKQVH
Trigger: ATGTACCTGTTTGTGAGGCAAAAATACTTTGTCGGC...CCATGGCTCAGATTGGGGTGATATTTCTGTATTAGCTATTAGTGTTTCTTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS CAA 72 bp GTCCCGGTCCTCTGGAAGCTTCTCCCATTATGCGCCTaGCTTTCATGCTCCACCTTGTGGGCAAAGAACGCA +
Preference number: 6 (lower is better)
Translates to: VPVLWKLLPLCA*LSCSTLWAKNA
Trigger: TGCGTTCTTTGCCCACAAGGTGGAGCATGAAAGCAAGGCGCATAATGGGAGAAGCTTCCAGAGGACCGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS CAA 90 bp AAGGCAAGAGTCCCGGTCCTCTGGAAGCTTCTCCCATTATGCGCCTaGCTTTCATGCTCCACCTTGTGGGCAAAGAACGCATTCTGGACC +
Preference number: 6 (lower is better)
Translates to: KARVPVLWKLLPLCA*LSCSTLWAKNAFWT
Trigger: GGTCCAGAATGCGTTCTTTGCCCACAAGGTGGAGCATGAAAGCAAGGCGCATAATGGGAGAAGCTTCCAGAGGACCGGGACTCTTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS CAA 90 bp AGGGGTGCTCTGAGTTCTCTCTCCCAGATAGCCGACAAAGTATTTTaGCCTCACAAACAGGTACATCAGTCCGGCGAAGGCGGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: RGALSSLSQIADKVF*PHKQVHQSGEGGRD
Trigger: GTCCCTGCCGCCTTCGCCGGACTGATGTACCTGTTTGTGAGGCAAAAATACTTTGTCGGCTATCTGGGAGAGAGAACTCAGAGCACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS GCA 72 bp TCCCGGTCCTCTGGAAGCTTCTCCCATTATGCGCCTTaGTTTCATGCTCCACCTTGTGGGCAAAGAACGCAT +
Preference number: 6 (lower is better)
Translates to: SRSSGSFSHYAP*FHAPPCGQRTH
Trigger: ATGCGTTCTTTGCCCACAAGGTGGAGCATGAAAGCAAGGCGCATAATGGGAGAAGCTTCCAGAGGACCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS CCA 72 bp CTCCCATTATGCGCCTTGCTTTCATGCTCCACCTTGTaGGCAAAGAACGCATTCTGGACCACGCTGATGAGG +
Preference number: 6 (lower is better)
Translates to: LPLCALLSCSTL*AKNAFWTTLMR
Trigger: CCTCATCAGCGTGGTCCAGAATGCGTTCTTTGCCCACAAGGTGGAGCATGAAAGCAAGGCGCATAATGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS GCA 72 bp CTCTGGAAGCTTCTCCCATTATGCGCCTTGCTTTCATaGTCCACCTTGTGGGCAAAGAACGCATTCTGGACC +
Preference number: 6 (lower is better)
Translates to: LWKLLPLCALLS*STLWAKNAFWT
Trigger: GGTCCAGAATGCGTTCTTTGCCCACAAGGTGGAGCATGAAAGCAAGGCGCATAATGGGAGAAGCTTCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS CAA 72 bp CTTCTCCCATTATGCGCCTTGCTTTCATGCTCCACCTaGTGGGCAAAGAACGCATTCTGGACCACGCTGATG +
Preference number: 6 (lower is better)
Translates to: LLPLCALLSCST*WAKNAFWTTLM
Trigger: CATCAGCGTGGTCCAGAATGCGTTCTTTGCCCACAAGGTGGAGCATGAAAGCAAGGCGCATAATGGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS CCA 72 bp AAAGTAGTCCTGCAGTCCAGAGTACCACAAGGAAAGTaGGGTACGCATCTACGCAGTTCTGGTTGGCAGTGT +
Preference number: 6 (lower is better)
Translates to: KVVLQSRVPQGK*GTHLRSSGWQC
Trigger: ACACTGCCAACCAGAACTGCGTAGATGCGTACCCCACTTTCCTTGTGGTACTCTGGACTGCAGGACTACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5
CDS CAA 72 bp CTGAGTTCTCTCTCCCAGATAGCCGACAAAGTATTTTaGCCTCACAAACAGGTACATCAGTCCGGCGAAGGC +
Preference number: 6 (lower is better)
Translates to: LSSLSQIADKVF*PHKQVHQSGEG
Trigger: GCCTTCGCCGGACTGATGTACCTGTTTGTGAGGCAAAAATACTTTGTCGGCTATCTGGGAGAGAGAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071130.5