Pregenerated sensors for ALOX12E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018907Ensembl transcript IDs: ENSMUST00000019051.3
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | AGGGATAATCGCTGTGCATTCCCCAGGGCTGTGTGGTaGGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAG | + |
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Preference number: 3 (lower is better) Translates to: RDNRCAFPRAVW*EAVYSPEGVAK Trigger: CTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACACAGCCCTGGGGAATGCACAGCGATTATCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| 3UTR CCA 72 bp | CTGTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTaGCCAAGGAGGACAAGACTGTGCACACACACAGAG | + |
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Preference number: 3 (lower is better) Translates to: LCGAKLSIHQRV*PRRTRLCTHTE Trigger: CTCTGTGTGTGTGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR TCA 90 bp | CCCCAGGGCTGTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGTGGCTGGAGCTGGATaGCCATGGGTAAGAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PQGCVVRSCLFTRGCGQGVAGAG*PWVRAS Trigger: GGAGGCTCTTACCCATGGTCATCCAGCTCCAGCCAC...TCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACACAGCCCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | CCCCAGGGCTGTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGGACATCCGTGTCGTaGTGGCTGGAGCTGGATGAC | + |
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Preference number: 4 (lower is better) Translates to: PQGCVVRSCLFTRGCGQGGTSVS*WLELDD Trigger: GTCATCCAGCTCCAGCCACCACGACACGGATGTCCC...TCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACACAGCCCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR TCA 90 bp | CTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCACACACACAGCCCCAGGGCCACCATaGCAGGCTGGCGTCTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LSIHQRVWPRRTRLCTHTAPGPP*QAGVCQ Trigger: TTGGCAGACGCCAGCCTGTCATGGTGGCCCTGGGGC...TGTGTGTGTGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR GCA 90 bp | TGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGCCCACCAGCCACAGATaGACCAGGTTGGCGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CGAKLSIHQRVWPRRTRLPTSHR*TRLAEP Trigger: GGGCTCCGCCAACCTGGTGCATCTGTGGCTGGTGGG...CAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR GCA 90 bp | TGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCACAGGAGGCGCCCTAGATaGAAGGGGACGTCGACCTCC | + |
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Preference number: 4 (lower is better) Translates to: CEAVYSPEGVAKEDKTVHRRRPR*KGTSTS Trigger: GGAGGTCGACGTCCCCTTGCATCTAGGGCGCCTCCT...GTGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | GTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTTACGTCTTCCATCCCTaGAGGCAGGACCAGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VWCEAVYSPEGVAKEDKTYVFHP*RQDQPG Trigger: GCCCGGCTGGTCCTGCCTCCAGGGATGGAAGACGTA...AGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | GTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCAGGGAACCCTCGGTCCTaGGCTCCAAGCAGTCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: VRSCLFTRGCGQGGQDCAGNPRS*APSSPT Trigger: GGTTGGACTGCTTGGAGCCCAGGACCGAGGGTTCCC...TGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR GCA 90 bp | CTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCACACACACAAGGTCCGCCTCTCCATaGTCGCCCACCAGCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: LSIHQRVWPRRTRLCTHTRSASP*SPTSHR Trigger: TCTGTGGCTGGTGGGCGAGCATGGAGAGGCGGACCT...TGTGTGTGTGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR GCA 90 bp | CCAGGGCTGTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGATAGGCCTTTCTGTTTaGGCAGCTTCACCGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGLCGAKLSIHQRVWPRRIGLSV*AASPPG Trigger: TCCTGGCGGTGAAGCTGCGCAAACAGAAAGGCCTAT...CCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACACAGCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR GCA 90 bp | GGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCGGGCAGGTCCAGGCTTaGATTCCGGACCTCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GAKLSIHQRVWPRRTRLCGQVQA*IPDLNL Trigger: GAGATTGAGGTCCGGAATGCAAGCCTGGACCTGCCC...GCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | GTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTCCGTGTCGTGGTGGCTaGAGCTGGATGACCATGGGT | + |
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Preference number: 4 (lower is better) Translates to: VVRSCLFTRGCGQGGQDCPCRGG*SWMTMG Trigger: ACCCATGGTCATCCAGCTCCAGCCACCACGACACGG...ACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | GTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCAGTGGGGGCTTCCGCATaGTGCATGGGCCATTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: VRSCLFTRGCGQGGQDCAVGASA*CMGHLG Trigger: TCCCAAATGGCCCATGCACCATGCGGAAGCCCCCAC...TGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | CCCCAGGGCTGTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGCACCGTTGAGGAACTaGTACCCAAAGAGAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PQGCVVRSCLFTRGCGQGAPLRN*YPKRAS Trigger: AGATGCTCTCTTTGGGTACCAGTTCCTCAACGGTGC...TCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACACAGCCCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | GTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCACGTGGTGGCTGGAGCTaGATGACCATGGGTAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: VRSCLFTRGCGQGGQDCARGGWS*MTMGKS Trigger: GCTCTTACCCATGGTCATCCAGCTCCAGCCACCACG...TGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | CCCCAGGGCTGTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGATGTAACTGGTGCAGTTaGAAGTCAGAGCTTCGGACC | + |
|
Preference number: 4 (lower is better) Translates to: PQGCVVRSCLFTRGCGQGCNWCS*KSELRT Trigger: GGTCCGAAGCTCTGACTTCCAACTGCACCAGTTACA...TCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACACAGCCCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | AGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCACACACATGGAGAATGTCCACATaGCCTCCGCTCCCCGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SCLFTRGCGQGGQDCAHTWRMST*PPLPVL Trigger: GAGCACGGGGAGCGGAGGCCATGTGGACATTCTCCA...TGTGTGTGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | GTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTATCCTTGGAGATGGGTaGGGGCTTCCGCATGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: VVRSCLFTRGCGQGGQDCILGDG*GLPHGA Trigger: TGCACCATGCGGAAGCCCCCACCCATCTCCAAGGAT...ACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | GTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCATCACATCCTTGGAGATaGGTGGGGGCTTCCGCATGG | + |
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Preference number: 4 (lower is better) Translates to: VRSCLFTRGCGQGGQDCASHPWR*VGASAW Trigger: CCATGCGGAAGCCCCCACCCATCTCCAAGGATGTGA...TGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR GCA 90 bp | GGCTGTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAATACTCCTCTTTATGCTaGCCCAGGGCCACCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: GCVVRSCLFTRGCGQGGQYSSLC*PRATMT Trigger: TGTCATGGTGGCCCTGGGGCAGCATAAAGAGGAGTA...TTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACACAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | TGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGAAAAAGGCTTCTCCTTaGGTCCCAGGGCCCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: CGAKLSIHQRVWPRRTRLKKASP*VPGPCT Trigger: TGTGCAGGGCCCTGGGACCCAAGGAGAAGCCTTTTT...CAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | GTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTACATCCGTGTCGTGGTaGCTGGAGCTGGATGACCAT | + |
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Preference number: 4 (lower is better) Translates to: VVRSCLFTRGCGQGGQDCTSVSW*LELDDH Trigger: ATGGTCATCCAGCTCCAGCCACCACGACACGGATGT...ACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | TGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCACCACGACGTGGCTCTCTaGAGAATGTCCACATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: CEAVYSPEGVAKEDKTVHHDVAL*RMSTWP Trigger: AGGCCATGTGGACATTCTCCAGAGAGCCACGTCGTG...GTGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | CTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCACACACACACTTCCGCATGGTGCATaGGCCATTTGGGATCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LSIHQRVWPRRTRLCTHTLPHGA*AIWDPG Trigger: GCCTGGATCCCAAATGGCCCATGCACCATGCGGAAG...TGTGTGTGTGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | GTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTTCTCTGTCACATCCTTaGAGATGGGTGGGGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: VWCEAVYSPEGVAKEDKTSLSHP*RWVGAS Trigger: GGAAGCCCCCACCCATCTCCAAGGATGTGACAGAGA...AGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | TGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCACACACACAGGCCACCATGACAGGCTaGCGTCTGCCAAGGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: CLFTRGCGQGGQDCAHTQATMTG*RLPRNL Trigger: CAAGTTCCTTGGCAGACGCCAGCCTGTCATGGTGGC...CTGTGTGTGTGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR TCA 90 bp | GTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTTCCGTGCCAGGGTGTTaGTCTCCATGGTGTATCGAA | + |
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Preference number: 4 (lower is better) Translates to: VWCEAVYSPEGVAKEDKTSVPGC*SPWCIE Trigger: TTCGATACACCATGGAGATCAACACCCTGGCACGGA...AGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR TCA 90 bp | GGCTGTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAATGCCAAGGAACTTGGTaGCTGTTATCTGCATCCGTG | + |
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Preference number: 4 (lower is better) Translates to: GCVVRSCLFTRGCGQGGQCQGTW*LLSASV Trigger: CACGGATGCAGATAACAGTCACCAAGTTCCTTGGCA...TTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | CCAGGGCTGTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGAGATGTGACTGTAACTaGTGCAGTTGGAAGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PGLCGAKLSIHQRVWPRRRCDCN*CSWKSE Trigger: CTCTGACTTCCAACTGCACCAGTTACAGTCACATCT...CCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACACAGCCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR TCA 90 bp | CCAGGGCTGTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGTTCCTAAACAGGTTCTaGGTGTCATCAGTTACCTTC | + |
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Preference number: 4 (lower is better) Translates to: PGLCGAKLSIHQRVWPRRFLNRF*VSSVTF Trigger: GAAGGTAACTGATGACACTCAGAACCTGTTTAGGAA...CCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACACAGCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR GCA 90 bp | GTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTAGCTTGTATATGGGGTaGAGGCTGGGTAAACTCCTC | + |
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Preference number: 4 (lower is better) Translates to: VVRSCLFTRGCGQGGQDCSLYMG*RLGKLL Trigger: GAGGAGTTTACCCAGCCTGCACCCCATATACAAGCT...ACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR TCA 90 bp | TGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCACACACACAGGCTGTAGTTTCAGCATaGCCAAAGGGGCTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: CLFTRGCGQGGQDCAHTQAVVSA*PKGLSH Trigger: ATGTGACAGCCCCTTTGGTCATGCTGAAACTACAGC...CTGTGTGTGTGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | AGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCACACACAAGCCTGAGGGCATCCTaGGCATACAGAGAAGATTTC | + |
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Preference number: 4 (lower is better) Translates to: SCLFTRGCGQGGQDCAHTSLRAS*AYREDF Trigger: GAAATCTTCTCTGTATGCCCAGGATGCCCTCAGGCT...TGTGTGTGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR GCA 90 bp | GTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTTGTGACTGTAACTGGTaGAGTTGGAAGTCAGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: VWCEAVYSPEGVAKEDKTCDCNW*SWKSEL Trigger: AAGCTCTGACTTCCAACTGCACCAGTTACAGTCACA...AGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR TCA 90 bp | CTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCACACACACAAGTTCTTCAACTCTTTaGCCAGAGAGAGGGAAAAAT | + |
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Preference number: 4 (lower is better) Translates to: LSIHQRVWPRRTRLCTHTSSSTL*PERGKN Trigger: ATTTTTCCCTCTCTCTGGTCAAAGAGTTGAAGAACT...TGTGTGTGTGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CCA 90 bp | GTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTAGCAGTCTTTGTATGTaGGAATACTTTCTGGTAATC | + |
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Preference number: 4 (lower is better) Translates to: VVRSCLFTRGCGQGGQDCSSLCM*EYFLVI Trigger: GATTACCAGAAAGTATTCCCACATACAAAGACTGCT...ACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS CCA 90 bp | CACAGCTCAGCCCGGGACTCTAAGGACAGGGGGAACCCTCGGTCCTaGGCTCCAAGCAGTCCAACCTCAGTGACCTCGCGGCACCAGACC | + |
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Preference number: 5 (lower is better) Translates to: HSSARDSKDRGNPRS*APSSPTSVTSRHQT Trigger: GGTCTGGTGCCGCGAGGTCACTGAGGTTGGACTGCTTGGAGCCCAGGACCGAGGGTTCCCCCTGTCCTTAGAGTCCCGGGCTGAGCTGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS GCA 90 bp | AGGCCTTTCTGTTTGCGCAGCTTCACCGCCAGGAGGCGCCCTAGATaGAAGGGGACGTCGACCTCCAGCTCTGTCTTCCTTCCCAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: RPFCLRSFTARRRPR*KGTSTSSSVFLPSS Trigger: ACTGCTGGGAAGGAAGACAGAGCTGGAGGTCGACGTCCCCTTGCATCTAGGGCGCCTCCTGGCGGTGAAGCTGCGCAAACAGAAAGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS CCA 90 bp | CCAAGTCATCCGGAGGGCAAAAGGAGCGGTAGGTCAAACACGACGTaGCTCTCTGGAGAATGTCCACATGGCCTCCGCTCCCCGTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: PSHPEGKRSGRSNTT*LSGECPHGLRSPCS Trigger: TGAGCACGGGGAGCGGAGGCCATGTGGACATTCTCCAGAGAGCCACGTCGTGTTTGACCTACCGCTCCTTTTGCCCTCCGGATGACTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CAA 90 bp | GGCTGTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGAAAAAGGCTTCTCCTaGGGTCCCAGGGCCCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: GCVVRSCLFTRGCGQGGQEKGFS*GPRALH Trigger: GTGCAGGGCCCTGGGACCCAAGGAGAAGCCTTTTTC...TTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACACAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CAA 90 bp | GGCTGTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAACTTCGGACCCAGATCTaGGCCAAGAGCCAGGCCATG | + |
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Preference number: 5 (lower is better) Translates to: GCVVRSCLFTRGCGQGGQLRTQI*AKSQAM Trigger: CATGGCCTGGCTCTTGGCCAAGATCTGGGTCCGAAG...TTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACACAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CAA 90 bp | CCAGGGCTGTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGCGGACCTCAATCTCCTaGTCCATGATAGCCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: PGLCGAKLSIHQRVWPRRRTSIS*SMIASS Trigger: GGAGCTGGCTATCATGGACAAGGAGATTGAGGTCCG...CCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACACAGCCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS CCA 90 bp | AAGGCAACGAGTCCACAATGTCCCTCTCTGTCACATCCTTGGAGATaGGTGGGGGCTTCCGCATGGTGCATGGGCCATTTGGGATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: KATSPQCPSLSHPWR*VGASAWCMGHLGSR Trigger: CCTGGATCCCAAATGGCCCATGCACCATGCGGAAGCCCCCACCCATCTCCAAGGATGTGACAGAGAGGGACATTGTGGACTCGTTGCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CAA 90 bp | CAGGGCTGTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGAAACAGAGATCCAGCCTaGAGCTCCTTCTCCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: QGCVVRSCLFTRGCGQGGNRDPA*SSFSSW Trigger: CCAGCTGGAGAAGGAGCTCAAGGCTGGATCTCTGTT...TCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACACAGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CAA 90 bp | GGCTGTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAACTCTCTGTCACATCCTaGGAGATGGGTGGGGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: GCVVRSCLFTRGCGQGGQLSVTS*EMGGGF Trigger: GAAGCCCCCACCCATCTCCAAGGATGTGACAGAGAG...TTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACACAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS GCA 90 bp | AGGCTGGCGTCTGCCAAGGAACTTGGTGACTGTTATCTGCATCCGTaGCTGCTGAAGGCAAGGCAACGAGTCCACAATGTCCCTCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: RLASAKELGDCYLHP*LLKARQRVHNVPLC Trigger: ACAGAGAGGGACATTGTGGACTCGTTGCCTTGCCTTCAGCAGGCACGGATGCAGATAACAGTCACCAAGTTCCTTGGCAGACGCCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CAA 90 bp | TGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCACACACACAGAGGGCAGGTCCAGGCTaGCATTCCGGACCTCAATCT | + |
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Preference number: 5 (lower is better) Translates to: CLFTRGCGQGGQDCAHTQRAGPG*HSGPQS Trigger: AGATTGAGGTCCGGAATGCAAGCCTGGACCTGCCCT...CTGTGTGTGTGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS TCA 90 bp | CGTCTGCCAAGGAACTTGGTGACTGTTATCTGCATCCGTGCCTGCTaGAGGCAAGGCAACGAGTCCACAATGTCCCTCTCTGTCACATCC | + |
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Preference number: 5 (lower is better) Translates to: RLPRNLVTVICIRAC*RQGNESTMSLSVTS Trigger: GGATGTGACAGAGAGGGACATTGTGGACTCGTTGCCTTGCCTTCAGCAGGCACGGATGCAGATAACAGTCACCAAGTTCCTTGGCAGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CAA 90 bp | TGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCACTTCCGTGCCAGGGTGTaGATCTCCATGGTGTATCGA | + |
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Preference number: 5 (lower is better) Translates to: CEAVYSPEGVAKEDKTVHFRARV*ISMVYR Trigger: TCGATACACCATGGAGATCAACACCCTGGCACGGAA...GTGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS TCA 90 bp | AGCAGGGGAAAAAGGCTTCTCCTTGGGTCCCAGGGCCCTGCACAGTaGTGCTCTTGCAGAACCAGTCAGAATCCAATAGGCCTTTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: SRGKRLLLGSQGPAQ*CSCRTSQNPIGLSV Trigger: AACAGAAAGGCCTATTGGATTCTGACTGGTTCTGCAAGAGCATCACTGTGCAGGGCCCTGGGACCCAAGGAGAAGCCTTTTTCCCCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS CCA 90 bp | AGATTATTCCGTGCCAGGGTGTTGATCTCCATGGTGTATCGAAAGTaGGGGGCAAGGAGCTTGTATATGGGGTGCAGGCTGGGTAAACTC | + |
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Preference number: 5 (lower is better) Translates to: RLFRARVLISMVYRK*GARSLYMGCRLGKL Trigger: GAGTTTACCCAGCCTGCACCCCATATACAAGCTCCTTGCCCCCCACTTTCGATACACCATGGAGATCAACACCCTGGCACGGAATAATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CAA 90 bp | GTGTGGTGCGAAGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTATGATGATGTTAGGTTaGACTCCATCCAGCAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: VWCEAVYSPEGVAKEDKTMMMLG*TPSSRE Trigger: CTCCCTGCTGGATGGAGTCAAACCTAACATCATCAT...AGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCTTCGCACCACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS CCA 90 bp | ACCAGAGAGAGGGAAAAATCTAAATCCTTATCCTTCATGAATCTCTaGTTCCGGGGGAGGTCCCGTTCAGTACTCCCTGCTATAGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: TREREKSKSLSFMNL*FRGRSRSVLPAIGR Trigger: CCTGCCTATAGCAGGGAGTACTGAACGGGACCTCCCCCGGAACCAGAGATTCATGAAGGATAAGGATTTAGATTTTTCCCTCTCTCTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CAA 90 bp | AGCTGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCACACACAAAGTTCTTCAACTCTTaGACCAGAGAGAGGGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: SCLFTRGCGQGGQDCAHTKFFNS*TREREK Trigger: TTTTTCCCTCTCTCTGGTCAAAGAGTTGAAGAACTT...TGTGTGTGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS-3UTR CAA 90 bp | TGTCTATTCACCAGAGGGTGTGGCCAAGGAGGACAAGACTGTGCACACACACAGAGGGGCTGTCACATATaGCTGCTTAAAAATGATGAT | + |
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Preference number: 5 (lower is better) Translates to: CLFTRGCGQGGQDCAHTQRGCHI*LLKNDD Trigger: ATCATCATTTTTAAGCAGCAATATGTGACAGCCCCT...CTGTGTGTGTGCACAGTCTTGTCCTCCTTGGCCACACCCTCTGGTGAATAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS CCA 72 bp | GCCCGGGACTCTAAGGACAGGGGGAACCCTCGGTCCTaGGCTCCAAGCAGTCCAACCTCAGTGACCTCGCGG | + |
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Preference number: 6 (lower is better) Translates to: ARDSKDRGNPRS*APSSPTSVTSR Trigger: CCGCGAGGTCACTGAGGTTGGACTGCTTGGAGCCCAGGACCGAGGGTTCCCCCTGTCCTTAGAGTCCCGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS GCA 72 bp | TGTTTGCGCAGCTTCACCGCCAGGAGGCGCCCTAGATaGAAGGGGACGTCGACCTCCAGCTCTGTCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: CLRSFTARRRPR*KGTSTSSSVFL Trigger: AAGGAAGACAGAGCTGGAGGTCGACGTCCCCTTGCATCTAGGGCGCCTCCTGGCGGTGAAGCTGCGCAAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS CCA 72 bp | CCGGAGGGCAAAAGGAGCGGTAGGTCAAACACGACGTaGCTCTCTGGAGAATGTCCACATGGCCTCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: PEGKRSGRSNTT*LSGECPHGLRS Trigger: GGAGCGGAGGCCATGTGGACATTCTCCAGAGAGCCACGTCGTGTTTGACCTACCGCTCCTTTTGCCCTCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS CAA 90 bp | GTGATGCTCTTGCAGAACCAGTCAGAATCCAATAGGCCTTTCTGTTaGCGCAGCTTCACCGCCAGGAGGCGCCCTAGATGCAAGGGGACG | + |
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Preference number: 6 (lower is better) Translates to: VMLLQNQSESNRPFC*RSFTARRRPRCKGT Trigger: CGTCCCCTTGCATCTAGGGCGCCTCCTGGCGGTGAAGCTGCGCAAACAGAAAGGCCTATTGGATTCTGACTGGTTCTGCAAGAGCATCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS GCA 72 bp | GCTGGGTCGGAGGTACTCATAGGGCAGGTCCAGGCTTaGATTCCGGACCTCAATCTCCTTGTCCATGATAGC | + |
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Preference number: 6 (lower is better) Translates to: AGSEVLIGQVQA*IPDLNLLVHDS Trigger: GCTATCATGGACAAGGAGATTGAGGTCCGGAATGCAAGCCTGGACCTGCCCTATGAGTACCTCCGACCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS CCA 72 bp | CGTGCCAGGGTGTTGATCTCCATGGTGTATCGAAAGTaGGGGGCAAGGAGCTTGTATATGGGGTGCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RARVLISMVYRK*GARSLYMGCRL Trigger: CAGCCTGCACCCCATATACAAGCTCCTTGCCCCCCACTTTCGATACACCATGGAGATCAACACCCTGGCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS CCA 72 bp | CACAATGTCCCTCTCTGTCACATCCTTGGAGATGGGTaGGGGCTTCCGCATGGTGCATGGGCCATTTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: HNVPLCHILGDG*GLPHGAWAIWD Trigger: ATCCCAAATGGCCCATGCACCATGCGGAAGCCCCCACCCATCTCCAAGGATGTGACAGAGAGGGACATTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS CCA 72 bp | TCCTCTTTATGCTGCCCCAGGGCCACCATGACAGGCTaGCGTCTGCCAAGGAACTTGGTGACTGTTATCTGC | + |
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Preference number: 6 (lower is better) Translates to: SSLCCPRATMTG*RLPRNLVTVIC Trigger: GCAGATAACAGTCACCAAGTTCCTTGGCAGACGCCAGCCTGTCATGGTGGCCCTGGGGCAGCATAAAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS GCA 72 bp | TGCAGAACCAGTCAGAATCCAATAGGCCTTTCTGTTTaGGCAGCTTCACCGCCAGGAGGCGCCCTAGATGCA | + |
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Preference number: 6 (lower is better) Translates to: CRTSQNPIGLSV*AASPPGGALDA Trigger: TGCATCTAGGGCGCCTCCTGGCGGTGAAGCTGCGCAAACAGAAAGGCCTATTGGATTCTGACTGGTTCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS CAA 72 bp | TTGCAGAACCAGTCAGAATCCAATAGGCCTTTCTGTTaGCGCAGCTTCACCGCCAGGAGGCGCCCTAGATGC | + |
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Preference number: 6 (lower is better) Translates to: LQNQSESNRPFC*RSFTARRRPRC Trigger: GCATCTAGGGCGCCTCCTGGCGGTGAAGCTGCGCAAACAGAAAGGCCTATTGGATTCTGACTGGTTCTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS TCA 72 bp | TCCAGCTCCTGCTCTCGATACTTCCTAAACAGGTTCTaGGTGTCATCAGTTACCTTCAGGGCAGTGCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: SSSCSRYFLNRF*VSSVTFRAVPS Trigger: CGAGGGCACTGCCCTGAAGGTAACTGATGACACTCAGAACCTGTTTAGGAAGTATCGAGAGCAGGAGCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS GCA 72 bp | TCTGCCAAGGAACTTGGTGACTGTTATCTGCATCCGTaGCTGCTGAAGGCAAGGCAACGAGTCCACAATGTC | + |
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Preference number: 6 (lower is better) Translates to: SAKELGDCYLHP*LLKARQRVHNV Trigger: GACATTGTGGACTCGTTGCCTTGCCTTCAGCAGGCACGGATGCAGATAACAGTCACCAAGTTCCTTGGCAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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| CDS CCA 72 bp | AGGGAAAAATCTAAATCCTTATCCTTCATGAATCTCTaGTTCCGGGGGAGGTCCCGTTCAGTACTCCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: REKSKSLSFMNL*FRGRSRSVLPA Trigger: AGCAGGGAGTACTGAACGGGACCTCCCCCGGAACCAGAGATTCATGAAGGATAAGGATTTAGATTTTTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019051.3 |
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