Pregenerated sensors for ALOX12B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032807Ensembl transcript IDs: ENSMUST00000036424.3
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCCAAGCAGAAAGCTTCCCCGATGAGGTGGCTCTCCAGCAAGTGTaGCACGGCCTCGTGGCTGTAGAACTCCGCGTAGCGCACCCACGT | + |
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Preference number: 5 (lower is better) Translates to: GQAESFPDEVALQQV*HGLVAVELRVAHPR Trigger: ACGTGGGTGCGCTACGCGGAGTTCTACAGCCACGAGGCCGTGGCACACTTGCTGGAGAGCCACCTCATCGGGGAAGCTTTCTGCTTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS TCA 90 bp | ACATGGGCAGGTTCCTCAGGAGGGCCAAGCAGAAAGCTTCCCCGATaGGGTGGCTCTCCAGCAAGTGTGCCACGGCCTCGTGGCTGTAGA | + |
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Preference number: 5 (lower is better) Translates to: TWAGSSGGPSRKLPR*GGSPASVPRPRGCR Trigger: TCTACAGCCACGAGGCCGTGGCACACTTGCTGGAGAGCCACCTCATCGGGGAAGCTTTCTGCTTGGCCCTCCTGAGGAACCTGCCCATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS TCA 90 bp | AGTGCAGCAAGCACATCGGGGCACAGTGATGCTGCTGCTGACCATTaGGCTCCACGGTGGGGATGCCATCCAGGATGCGGTAGTCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: SAASTSGHSDAAADH*APRWGCHPGCGSLP Trigger: TGGCAGACTACCGCATCCTGGATGGCATCCCCACCGTGGAGCTCAATGGTCAGCAGCAGCATCACTGTGCCCCGATGTGCTTGCTGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS TCA 90 bp | AGCAGGTGGGGAAGCCTGAGCTCTCACGCCCCAGGAGACACTCCTTaGATATCTCCTGTACCCAGCACTGCAGTTCCGGGTCGCCCTCTA | + |
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Preference number: 5 (lower is better) Translates to: SRWGSLSSHAPGDTP*ISPVPSTAVPGRPL Trigger: TAGAGGGCGACCCGGAACTGCAGTGCTGGGTACAGGAGATATTCAAGGAGTGTCTCCTGGGGCGTGAGAGCTCAGGCTTCCCCACCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS TCA 90 bp | TTAGTCTCTTCCAGGAGCGTTTTCGATCCACCAGGCCACGCAGTTTaGAGGCCAGCGCCATGGGCCCTAGGCGGTAGAAGAAGGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LVSSRSVFDPPGHAV*RPAPWALGGRRRRL Trigger: CAGCCTCCTTCTTCTACCGCCTAGGGCCCATGGCGCTGGCCTTCAAACTGCGTGGCCTGGTGGATCGAAAACGCTCCTGGAAGAGACTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CCA 90 bp | CCAGGTCCTGCTGGCACTGTACCGTGTAGTCATCCACCGCCCCCGTaGCAAAGTCTCTCCCAAAGTGGTTCAACCGCTGCTTATGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: PGPAGTVPCSHPPPP*QSLSQSGSTAAYGS Trigger: AGAGCCATAAGCAGCGGTTGAACCACTTTGGGAGAGACTTTGCCACGGGGGCGGTGGATGACTACACGGTACAGTGCCAGCAGGACCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CCA 90 bp | CTCCCGGAGTGCCAGGGTCTCATAGCCATCCATCCACTGGTAAGCTaGGAAGTGGTAGACACGGCAGTCGGGAGCACAGATCTGCACATA | + |
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Preference number: 5 (lower is better) Translates to: LPECQGLIAIHPLVS*EVVDTAVGSTDLHI Trigger: TATGTGCAGATCTGTGCTCCCGACTGCCGTGTCTACCACTTCCCAGCTTACCAGTGGATGGATGGCTATGAGACCCTGGCACTCCGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS GCA 90 bp | TCCACCGCCCCCGTGGCAAAGTCTCTCCCAAAGTGGTTCAACCGCTaGTTATGGCTCTCTCCTTGGGTCCCCACGATGGTCAGTGAAATT | + |
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Preference number: 5 (lower is better) Translates to: STAPVAKSLPKWFNR*LWLSPWVPTMVSEI Trigger: AATTTCACTGACCATCGTGGGGACCCAAGGAGAGAGCCATAAGCAGCGGTTGAACCACTTTGGGAGAGACTTTGCCACGGGGGCGGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS GCA 90 bp | AGGGAGTGTGTCGTCTGCTGTTATCTTTCCTGTGGCCTCCCGGAGTaGCAGGGTCTCATAGCCATCCATCCACTGGTAAGCTGGGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: RECVVCCYLSCGLPE*QGLIAIHPLVSWEV Trigger: CACTTCCCAGCTTACCAGTGGATGGATGGCTATGAGACCCTGGCACTCCGGGAGGCCACAGGAAAGATAACAGCAGACGACACACTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS GCA 90 bp | ACCATTGAGCTCCACGGTGGGGATGCCATCCAGGATGCGGTAGTCTaGCAGGTAAATATTCCCCCTCTCCAGCTCTGCTTGCAGGCATGT | + |
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Preference number: 5 (lower is better) Translates to: TIELHGGDAIQDAVV*QVNIPPLQLCLQAC Trigger: ACATGCCTGCAAGCAGAGCTGGAGAGGGGGAATATTTACCTGGCAGACTACCGCATCCTGGATGGCATCCCCACCGTGGAGCTCAATGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS GCA 90 bp | GGAAGTGGTAGACACGGCAGTCGGGAGCACAGATCTGCACATAGTTaGAGTACCAGGGGTCCTTGGCTAGGAAGGAATGAGGCTCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: GSGRHGSREHRSAHS*STRGPWLGRNEAPC Trigger: ACAAGGAGCCTCATTCCTTCCTAGCCAAGGACCCCTGGTACTGCAACTATGTGCAGATCTGTGCTCCCGACTGCCGTGTCTACCACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS GCA 90 bp | GGCATCCAAGAGGTGTACTCCAGCTGGCCTGAGTTGACAGCTGCATaGCTGGCCGAGCAGGTGTACATGACCATTGTGACGTATTCGATC | + |
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Preference number: 5 (lower is better) Translates to: GIQEVYSSWPELTAA*LAEQVYMTIVTYSI Trigger: GATCGAATACGTCACAATGGTCATGTACACCTGCTCGGCCAGGCATGCAGCTGTCAACTCAGGCCAGCTGGAGTACACCTCTTGGATGCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS GCA 90 bp | TGTCATCAGGCTCCCGACAGAGAGTCCAGAGCACCAAGAGCACAATaGATGTGGTCTTCACGTCCGGAAGAGTGTCCATGTATGTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: CHQAPDRESRAPRAQ*MWSSRPEECPCMSA Trigger: TGCAGACATACATGGACACTCTTCCGGACGTGAAGACCACATGCATTGTGCTCTTGGTGCTCTGGACTCTCTGTCGGGAGCCTGATGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CCA 90 bp | AAGTCTCTCCCAAAGTGGTTCAACCGCTGCTTATGGCTCTCTCCTTaGGTCCCCACGATGGTCAGTGAAATTGAATCCAGCGTCCCCGAA | + |
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Preference number: 5 (lower is better) Translates to: KSLPKWFNRCLWLSP*VPTMVSEIESSVPE Trigger: TTCGGGGACGCTGGATTCAATTTCACTGACCATCGTGGGGACCCAAGGAGAGAGCCATAAGCAGCGGTTGAACCACTTTGGGAGAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CCA 90 bp | TACCCAGCACTGCAGTTCCGGGTCGCCCTCTACGGCTGCGTCATTTaGGTAATAATAAGTGATGATCTCTGTCACGTACCTCTCCATCGC | + |
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Preference number: 5 (lower is better) Translates to: YPALQFRVALYGCVI*VIISDDLCHVPLHR Trigger: GCGATGGAGAGGTACGTGACAGAGATCATCACTTATTATTACCCAAATGACGCAGCCGTAGAGGGCGACCCGGAACTGCAGTGCTGGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS GCA 90 bp | GATCTCTTCTTGTCTGTGTTCCAAAAGGATAGGGAGTGTGTCGTCTaGTGTTATCTTTCCTGTGGCCTCCCGGAGTGCCAGGGTCTCATA | + |
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Preference number: 5 (lower is better) Translates to: DLFLSVFQKDRECVV*CYLSCGLPECQGLI Trigger: TATGAGACCCTGGCACTCCGGGAGGCCACAGGAAAGATAACAGCAGACGACACACTCCCTATCCTTTTGGAACACAGACAAGAAGAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS GCA 90 bp | TATCTCCTGTACCCAGCACTGCAGTTCCGGGTCGCCCTCTACGGCTaGGTCATTTGGGTAATAATAAGTGATGATCTCTGTCACGTACCT | + |
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Preference number: 5 (lower is better) Translates to: YLLYPALQFRVALYG*VIWVIISDDLCHVP Trigger: AGGTACGTGACAGAGATCATCACTTATTATTACCCAAATGACGCAGCCGTAGAGGGCGACCCGGAACTGCAGTGCTGGGTACAGGAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CCA 72 bp | CTCAGGAGGGCCAAGCAGAAAGCTTCCCCGATGAGGTaGCTCTCCAGCAAGTGTGCCACGGCCTCGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LRRAKQKASPMR*LSSKCATASWL Trigger: CAGCCACGAGGCCGTGGCACACTTGCTGGAGAGCCACCTCATCGGGGAAGCTTTCTGCTTGGCCCTCCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS TCA 72 bp | GGTTCCTCAGGAGGGCCAAGCAGAAAGCTTCCCCGATaGGGTGGCTCTCCAGCAAGTGTGCCACGGCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: GSSGGPSRKLPR*GGSPASVPRPR Trigger: ACGAGGCCGTGGCACACTTGCTGGAGAGCCACCTCATCGGGGAAGCTTTCTGCTTGGCCCTCCTGAGGAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CCA 72 bp | CGAGGACCCTCCTCCACAAAATGGATGTCTGGGAAGTaGCCAAGCGGCCGCCTGTCATCAGGCTCCCGACAG | + |
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Preference number: 6 (lower is better) Translates to: RGPSSTKWMSGK*PSGRLSSGSRQ Trigger: CTGTCGGGAGCCTGATGACAGGCGGCCGCTTGGCCACTTCCCAGACATCCATTTTGTGGAGGAGGGTCCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS TCA 72 bp | AGCACATCGGGGCACAGTGATGCTGCTGCTGACCATTaGGCTCCACGGTGGGGATGCCATCCAGGATGCGGT | + |
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Preference number: 6 (lower is better) Translates to: STSGHSDAAADH*APRWGCHPGCG Trigger: ACCGCATCCTGGATGGCATCCCCACCGTGGAGCTCAATGGTCAGCAGCAGCATCACTGTGCCCCGATGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CCA 72 bp | ACTCCTCCGAGGACCCTCCTCCACAAAATGGATGTCTaGGAAGTGGCCAAGCGGCCGCCTGTCATCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: TPPRTLLHKMDV*EVAKRPPVIRL Trigger: GAGCCTGATGACAGGCGGCCGCTTGGCCACTTCCCAGACATCCATTTTGTGGAGGAGGGTCCTCGGAGGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CAA 72 bp | CCCAGGGACATGGCCCTGGCAGAGAGACCTCCCTTGTaGAGAAGGAGGGCCCGCCCAATGCTATTGATCTGG | + |
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Preference number: 6 (lower is better) Translates to: PRDMALAERPPL*RRRARPMLLIW Trigger: CCAGATCAATAGCATTGGGCGGGCCCTCCTTCTCAACAAGGGAGGTCTCTCTGCCAGGGCCATGTCCCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CAA 72 bp | AGGCCCAGGGACATGGCCCTGGCAGAGAGACCTCCCTaGTTGAGAAGGAGGGCCCGCCCAATGCTATTGATC | + |
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Preference number: 6 (lower is better) Translates to: RPRDMALAERPP*LRRRARPMLLI Trigger: GATCAATAGCATTGGGCGGGCCCTCCTTCTCAACAAGGGAGGTCTCTCTGCCAGGGCCATGTCCCTGGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CAA 90 bp | AAGCAGGTGGGGAAGCCTGAGCTCTCACGCCCCAGGAGACACTCCTaGAATATCTCCTGTACCCAGCACTGCAGTTCCGGGTCGCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: KQVGKPELSRPRRHS*NISCTQHCSSGSPS Trigger: AGAGGGCGACCCGGAACTGCAGTGCTGGGTACAGGAGATATTCAAGGAGTGTCTCCTGGGGCGTGAGAGCTCAGGCTTCCCCACCTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CCA 72 bp | GCTGGCACTGTACCGTGTAGTCATCCACCGCCCCCGTaGCAAAGTCTCTCCCAAAGTGGTTCAACCGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: AGTVPCSHPPPP*QSLSQSGSTAA Trigger: AGCAGCGGTTGAACCACTTTGGGAGAGACTTTGCCACGGGGGCGGTGGATGACTACACGGTACAGTGCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CCA 72 bp | GATGGGAAGTTGGGCATCCAAGAGGTGTACTCCAGCTaGCCTGAGTTGACAGCTGCATGCCTGGCCGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: DGKLGIQEVYSS*PELTAACLAEQ Trigger: CTGCTCGGCCAGGCATGCAGCTGTCAACTCAGGCCAGCTGGAGTACACCTCTTGGATGCCCAACTTCCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CAA 72 bp | GGGAAGCCTGAGCTCTCACGCCCCAGGAGACACTCCTaGAATATCTCCTGTACCCAGCACTGCAGTTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: GKPELSRPRRHS*NISCTQHCSSG Trigger: CCCGGAACTGCAGTGCTGGGTACAGGAGATATTCAAGGAGTGTCTCCTGGGGCGTGAGAGCTCAGGCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS TCA 72 bp | GGAAGCCTGAGCTCTCACGCCCCAGGAGACACTCCTTaGATATCTCCTGTACCCAGCACTGCAGTTCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: GSLSSHAPGDTP*ISPVPSTAVPG Trigger: ACCCGGAACTGCAGTGCTGGGTACAGGAGATATTCAAGGAGTGTCTCCTGGGGCGTGAGAGCTCAGGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS GCA 72 bp | CCCGTGGCAAAGTCTCTCCCAAAGTGGTTCAACCGCTaGTTATGGCTCTCTCCTTGGGTCCCCACGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: PVAKSLPKWFNR*LWLSPWVPTMV Trigger: GACCATCGTGGGGACCCAAGGAGAGAGCCATAAGCAGCGGTTGAACCACTTTGGGAGAGACTTTGCCACGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS GCA 72 bp | CTCCACGGTGGGGATGCCATCCAGGATGCGGTAGTCTaGCAGGTAAATATTCCCCCTCTCCAGCTCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: LHGGDAIQDAVV*QVNIPPLQLCL Trigger: CAAGCAGAGCTGGAGAGGGGGAATATTTACCTGGCAGACTACCGCATCCTGGATGGCATCCCCACCGTGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CCA 72 bp | TCATCCACCGCCCCCGTGGCAAAGTCTCTCCCAAAGTaGTTCAACCGCTGCTTATGGCTCTCTCCTTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SSTAPVAKSLPK*FNRCLWLSPWV Trigger: GACCCAAGGAGAGAGCCATAAGCAGCGGTTGAACCACTTTGGGAGAGACTTTGCCACGGGGGCGGTGGATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CAA 90 bp | AGCCCCTTGGTCTGCATCGGTGGGTTCCTCATGGATGATGGGAAGTaGGGCATCCAAGAGGTGTACTCCAGCTGGCCTGAGTTGACAGCT | + |
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Preference number: 6 (lower is better) Translates to: SPLVCIGGFLMDDGK*GIQEVYSSWPELTA Trigger: AGCTGTCAACTCAGGCCAGCTGGAGTACACCTCTTGGATGCCCAACTTCCCATCATCCATGAGGAACCCACCGATGCAGACCAAGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS GCA 72 bp | GTCGTCTGCTGTTATCTTTCCTGTGGCCTCCCGGAGTaGCAGGGTCTCATAGCCATCCATCCACTGGTAAGC | + |
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Preference number: 6 (lower is better) Translates to: VVCCYLSCGLPE*QGLIAIHPLVS Trigger: GCTTACCAGTGGATGGATGGCTATGAGACCCTGGCACTCCGGGAGGCCACAGGAAAGATAACAGCAGACGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CCA 72 bp | TGCCAGGGTCTCATAGCCATCCATCCACTGGTAAGCTaGGAAGTGGTAGACACGGCAGTCGGGAGCACAGAT | + |
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Preference number: 6 (lower is better) Translates to: CQGLIAIHPLVS*EVVDTAVGSTD Trigger: ATCTGTGCTCCCGACTGCCGTGTCTACCACTTCCCAGCTTACCAGTGGATGGATGGCTATGAGACCCTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CAA 72 bp | GTCTGCCAGGTAAATATTCCCCCTCTCCAGCTCTGCTaGCAGGCATGTTCCTTCACCCAGGAATGGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: VCQVNIPPLQLC*QACSFTQEWGH Trigger: GTGGCCCCATTCCTGGGTGAAGGAACATGCCTGCAAGCAGAGCTGGAGAGGGGGAATATTTACCTGGCAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS GCA 72 bp | AGACACGGCAGTCGGGAGCACAGATCTGCACATAGTTaGAGTACCAGGGGTCCTTGGCTAGGAAGGAATGAG | + |
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Preference number: 6 (lower is better) Translates to: RHGSREHRSAHS*STRGPWLGRNE Trigger: CTCATTCCTTCCTAGCCAAGGACCCCTGGTACTGCAACTATGTGCAGATCTGTGCTCCCGACTGCCGTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS GCA 72 bp | AGGAGACACTCCTTGAATATCTCCTGTACCCAGCACTaGAGTTCCGGGTCGCCCTCTACGGCTGCGTCATTT | + |
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Preference number: 6 (lower is better) Translates to: RRHSLNISCTQH*SSGSPSTAASF Trigger: AAATGACGCAGCCGTAGAGGGCGACCCGGAACTGCAGTGCTGGGTACAGGAGATATTCAAGGAGTGTCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS GCA 72 bp | GCTCCCGACAGAGAGTCCAGAGCACCAAGAGCACAATaGATGTGGTCTTCACGTCCGGAAGAGTGTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: APDRESRAPRAQ*MWSSRPEECPC Trigger: ACATGGACACTCTTCCGGACGTGAAGACCACATGCATTGTGCTCTTGGTGCTCTGGACTCTCTGTCGGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS TCA 72 bp | CAATCAGCACTGGGTCCAGGTAGTAGTACGGGAGGGTaGGGCACTTATTGCGCTGTCGGATGTTGTGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: QSALGPGSSTGG*GTYCAVGCCER Trigger: TCTCTCACAACATCCGACAGCGCAATAAGTGCCTCACCCTCCCGTACTACTACCTGGACCCAGTGCTGATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CCA 72 bp | GGGGAGGAGGATGGTAACTGGGGATATCCACATAGTTaGGAAGGCCAGGAACAAAGACCCTCCAGTGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: GEEDGNWGYPHS*EGQEQRPSSGR Trigger: TCTACCACTGGAGGGTCTTTGTTCCTGGCCTTCCCAACTATGTGGATATCCCCAGTTACCATCCTCCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS TCA 72 bp | CGCCCAATGCTATTGATCTGGACGTTGTACCGAGTGTaGGGGATGAGAAGCTTATACAGGGGGTGGCACATG | + |
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Preference number: 6 (lower is better) Translates to: RPMLLIWTLYRV*GMRSLYRGWHM Trigger: CATGTGCCACCCCCTGTATAAGCTTCTCATCCCTCACACTCGGTACAACGTCCAGATCAATAGCATTGGGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS GCA 72 bp | TTGTCTGTGTTCCAAAAGGATAGGGAGTGTGTCGTCTaGTGTTATCTTTCCTGTGGCCTCCCGGAGTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LSVFQKDRECVV*CYLSCGLPECQ Trigger: CTGGCACTCCGGGAGGCCACAGGAAAGATAACAGCAGACGACACACTCCCTATCCTTTTGGAACACAGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CCA 72 bp | CCAAAGTGGTTCAACCGCTGCTTATGGCTCTCTCCTTaGGTCCCCACGATGGTCAGTGAAATTGAATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PKWFNRCLWLSP*VPTMVSEIESS Trigger: GCTGGATTCAATTTCACTGACCATCGTGGGGACCCAAGGAGAGAGCCATAAGCAGCGGTTGAACCACTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CAA 72 bp | AGAGTGTCCATGTATGTCTGCAGAGTAGTTAGCCCCTaGGTCTGCATCGGTGGGTTCCTCATGGATGATGGG | + |
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Preference number: 6 (lower is better) Translates to: RVSMYVCRVVSP*VCIGGFLMDDG Trigger: CCCATCATCCATGAGGAACCCACCGATGCAGACCAAGGGGCTAACTACTCTGCAGACATACATGGACACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS GCA 72 bp | TCCATGTATGTCTGCAGAGTAGTTAGCCCCTTGGTCTaGATCGGTGGGTTCCTCATGGATGATGGGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: SMYVCRVVSPLV*IGGFLMDDGKL Trigger: CAACTTCCCATCATCCATGAGGAACCCACCGATGCAGACCAAGGGGCTAACTACTCTGCAGACATACATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CCA 72 bp | GACAGAGAGTCCAGAGCACCAAGAGCACAATGCATGTaGTCTTCACGTCCGGAAGAGTGTCCATGTATGTCT | + |
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Preference number: 6 (lower is better) Translates to: DRESRAPRAQCM*SSRPEECPCMS Trigger: AGACATACATGGACACTCTTCCGGACGTGAAGACCACATGCATTGTGCTCTTGGTGCTCTGGACTCTCTGTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS TCA 72 bp | GAAGCTGTCCTCTGTCCAGTGCTCGGCCACATACTCTaGGACGACAGACTTGGTAGCAGGGAAAATATTCTT | + |
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Preference number: 6 (lower is better) Translates to: EAVLCPVLGHIL*DDRLGSRENIL Trigger: AAGAATATTTTCCCTGCTACCAAGTCTGTCGTCTCAGAGTATGTGGCCGAGCACTGGACAGAGGACAGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS CAA 72 bp | AGGAATGGGGCCACCATTTCATCTGTGACTGGGAATTaGTCTGGGATCTGTGTACATCTTCGGATCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RNGATISSVTGN*SGICVHLRIRP Trigger: AGGCCTGATCCGAAGATGTACACAGATCCCAGACAAATTCCCAGTCACAGATGAAATGGTGGCCCCATTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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| CDS TCA 72 bp | TTCCTTCACCCAGGAATGGGGCCACCATTTCATCTGTaGCTGGGAATTTGTCTGGGATCTGTGTACATCTTC | + |
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Preference number: 6 (lower is better) Translates to: FLHPGMGPPFHL*LGICLGSVYIF Trigger: GAAGATGTACACAGATCCCAGACAAATTCCCAGTCACAGATGAAATGGTGGCCCCATTCCTGGGTGAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036424.3 |
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