Pregenerated sensors for ALOX12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000320Ensembl transcript IDs: ENSMUST00000000329.9, ENSMUST00000108574.3
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTTGCGAGTGTGTGTGTGTGGACATGGGTGTCAAGGTGCCCATGTaGAAGCCAGAGGAAGTTGATTCCCTCCCCTCTCTCTCTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: ACECVCVDMGVKVPM*KPEEVDSLPSLSLS Trigger: AGAGAGAGAGAGAGAGGGGAGGGAATCAACTTCCTCTGGCTTCCACATGGGCACCTTGACACCCATGTCCACACACACACACTCGCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR TCA 90 bp | TGTGGACATGGGTGTCAAGGTGCCCATGTGGAAGCCAGAGGAAGTTaGTTCCCTCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: CGHGCQGAHVEARGS*FPPLSLSLSLSLSL Trigger: GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGGAGGGAATCAACTTCCTCTGGCTTCCACATGGGCACCTTGACACCCATGTCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR GCA 90 bp | CCTTTGAGTTGGGGGAGTGGTAGAGACAGGTGGATTCCAGGGACTTaGTGGCCAGCCAGTCTAGACAAAATGGTGAACTCCAGGTCCAAT | + |
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Preference number: 1 (lower is better) Translates to: PLSWGSGRDRWIPGT*WPASLDKMVNSRSN Trigger: ATTGGACCTGGAGTTCACCATTTTGTCTAGACTGGCTGGCCAGCAAGTCCCTGGAATCCACCTGTCTCTACCACTCCCCCAACTCAAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR CCA 90 bp | ACTGTATTACCCAAGGGGATAATTTCAGAGGAGTCACAACTATATTaGCCAGGCCTGGGCAGTCAGATGGCAGCACCCAGCTGGAGCGAT | + |
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Preference number: 1 (lower is better) Translates to: TVLPKGIISEESQLY*PGLGSQMAAPSWSD Trigger: ATCGCTCCAGCTGGGTGCTGCCATCTGACTGCCCAGGCCTGGCCAATATAGTTGTGACTCCTCTGAAATTATCCCCTTGGGTAATACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR GCA 90 bp | TTTTATTTGCTTGCGAGTGTGTGTGTGTGGACATGGGTGTCAAGGTaGCCATGTGGAAGCCAGAGGAAGTTGATTCCCTCCCCTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: FYLLASVCVWTWVSR*PCGSQRKLIPSPLS Trigger: AGAGAGAGGGGAGGGAATCAACTTCCTCTGGCTTCCACATGGGCACCTTGACACCCATGTCCACACACACACACTCGCAAGCAAATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR CCA 90 bp | AGATTGCTAGGAGGATTTTTGATGTTGTATCTACCTCCTTTGAGTTaGGGGAGTGGTAGAGACAGGTGGATTCCAGGGACTTGCTGGCCA | + |
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Preference number: 1 (lower is better) Translates to: RLLGGFLMLYLPPLS*GSGRDRWIPGTCWP Trigger: TGGCCAGCAAGTCCCTGGAATCCACCTGTCTCTACCACTCCCCCAACTCAAAGGAGGTAGATACAACATCAAAAATCCTCCTAGCAATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR TCA 90 bp | CTAGGTCTGACATTCACATTCTTTAAGAAGCTTTCACCAATTGTGTaGTCTCTGGCATATTCTCTACGTGTGACATGTCATCAGGGTTTT | + |
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Preference number: 1 (lower is better) Translates to: LGLTFTFFKKLSPIV*SLAYSLRVTCHQGF Trigger: AAAACCCTGATGACATGTCACACGTAGAGAATATGCCAGAGATCACACAATTGGTGAAAGCTTCTTAAAGAATGTGAATGTCAGACCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR GCA 90 bp | GGCCTGGGCAGTCAGATGGCAGCACCCAGCTGGAGCGATTTAATTGCTCTTGCATGGATTCCAGGGACTTaGTGGCCAGCCAGTCTAGAC | + |
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Preference number: 2 (lower is better) Translates to: GLGSQMAAPSWSDLIALAWIPGT*WPASLD Trigger: GTCTAGACTGGCTGGCCAGCAAGTCCCTGGAATCCA...TGCAAGAGCAATTAAATCGCTCCAGCTGGGTGCTGCCATCTGACTGCCCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR CCA 90 bp | CAACTATATTGGCCAGGCCTGGGCAGTCAGATGGCAGCACCCAGCTGGAGCGATGTGTGTGTGTGGACATaGGTGTCAAGGTGCCCATGT | + |
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Preference number: 2 (lower is better) Translates to: QLYWPGLGSQMAAPSWSDVCVWT*VSRCPC Trigger: ACATGGGCACCTTGACACCCATGTCCACACACACAC...ATCGCTCCAGCTGGGTGCTGCCATCTGACTGCCCAGGCCTGGCCAATATAGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR CCA 90 bp | GGAGTCACAACTATATTGGCCAGGCCTGGGCAGTCAGATGGCAGCACCCAGCTGGTCAAGGTGCCCATGTaGAAGCCAGAGGAAGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: GVTTILARPGQSDGSTQLVKVPM*KPEEVD Trigger: ATCAACTTCCTCTGGCTTCCACATGGGCACCTTGAC...CAGCTGGGTGCTGCCATCTGACTGCCCAGGCCTGGCCAATATAGTTGTGACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGGGCAGTCAGATGGCAGCACCCAGCTGGAGCGATTTAATTGCTCTTGCACAGGTTCCCCACGCTTaGGCAGTAAGCATTTTATCC | + |
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Preference number: 2 (lower is better) Translates to: GLGSQMAAPSWSDLIALAQVPHA*AVSILS Trigger: GGATAAAATGCTTACTGCTCAAGCGTGGGGAACCTG...TGCAAGAGCAATTAAATCGCTCCAGCTGGGTGCTGCCATCTGACTGCCCAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR TCA 90 bp | AGTTGGGGGAGTGGTAGAGACAGGTGGATTCCAGGGACTTGCTGGCCAGCCAGTCAAATAGCTCATTTGTaGCGAAGGGAGACAGGACAA | + |
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Preference number: 2 (lower is better) Translates to: SWGSGRDRWIPGTCWPASQIAHL*RRETGQ Trigger: TTGTCCTGTCTCCCTTCGTCACAAATGAGCTATTTG...ACTGGCTGGCCAGCAAGTCCCTGGAATCCACCTGTCTCTACCACTCCCCCAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR GCA 90 bp | CAACTATATTGGCCAGGCCTGGGCAGTCAGATGGCAGCACCCAGCTGGAGCGATATTGTTTTATTTGCTTaGGAGTGTGTGTGTGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: QLYWPGLGSQMAAPSWSDIVLFA*ECVCVD Trigger: GTCCACACACACACACTCGCAAGCAAATAAAACAAT...ATCGCTCCAGCTGGGTGCTGCCATCTGACTGCCCAGGCCTGGCCAATATAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGGGCAGTCAGATGGCAGCACCCAGCTGGAGCGATTTAATTGCTCTTGCACATATTCTCTACGTGTaGCATGTCATCAGGGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: GLGSQMAAPSWSDLIALAHILYV*HVIRVF Trigger: AAAAACCCTGATGACATGTCACACGTAGAGAATATG...TGCAAGAGCAATTAAATCGCTCCAGCTGGGTGCTGCCATCTGACTGCCCAGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR CCA 90 bp | TTATCCACTAGCCACCTCCTCTATCCACAGTTGGTTCATAGCCACTTGTCTTCACTACCTCCTTTGAGTTaGGGGAGTGGTAGAGACAGG | + |
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Preference number: 2 (lower is better) Translates to: LSTSHLLYPQLVHSHLSSLPPLS*GSGRDR Trigger: CCTGTCTCTACCACTCCCCCAACTCAAAGGAGGTAG...TGAAGACAAGTGGCTATGAACCAACTGTGGATAGAGGAGGTGGCTAGTGGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR CCA 90 bp | CAACTATATTGGCCAGGCCTGGGCAGTCAGATGGCAGCACCCAGCTGGAGCGATAGCCACTTGTCTTCATaGCTAAATACTAAATCTTCT | + |
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Preference number: 2 (lower is better) Translates to: QLYWPGLGSQMAAPSWSDSHLSS*LNTKSS Trigger: AGAAGATTTAGTATTTAGCCATGAAGACAAGTGGCT...ATCGCTCCAGCTGGGTGCTGCCATCTGACTGCCCAGGCCTGGCCAATATAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR CCA 90 bp | AATAGAGGCTTTAACTATACACATCGACTAGAGACACAGATGCAGGTGGCCTCATATATTGGCCAGGCCTaGGCAGTCAGATGGCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: NRGFNYTHRLETQMQVASYIGQA*AVRWQH Trigger: GTGCTGCCATCTGACTGCCCAGGCCTGGCCAATATA...TGAGGCCACCTGCATCTGTGTCTCTAGTCGATGTGTATAGTTAAAGCCTCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR CAA 90 bp | CTGTTCCAGCTTCTCACTCACAGATTGCTAGGAGGATTTTTGATGTaGTATCTACCTCCTTTGAGTTGGGGGAGTGGTAGAGACAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LFQLLTHRLLGGFLM*YLPPLSWGSGRDRW Trigger: CCACCTGTCTCTACCACTCCCCCAACTCAAAGGAGGTAGATACAACATCAAAAATCCTCCTAGCAATCTGTGAGTGAGAAGCTGGAACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGCTTTCACCAATTGTGTGATCTCTGGCATATTCTCTACGTGTGACATGTCAGAAGCCAGAGGAAGTTaGTTCCCTCCCCTCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: EAFTNCVISGIFSTCDMSEARGS*FPPLSL Trigger: GAGAGAGAGGGGAGGGAATCAACTTCCTCTGGCTTC...TGACATGTCACACGTAGAGAATATGCCAGAGATCACACAATTGGTGAAAGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGCTTTCACCAATTGTGTGATCTCTGGCATATTCTCTACGTGTGACATGTCAACATGGGTGTCAAGGTaGCCATGTGGAAGCCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: EAFTNCVISGIFSTCDMSTWVSR*PCGSQR Trigger: CCTCTGGCTTCCACATGGGCACCTTGACACCCATGT...TGACATGTCACACGTAGAGAATATGCCAGAGATCACACAATTGGTGAAAGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR CAA 90 bp | AGCTTTCTGTTCCAGCTTCTCACTCACAGATTGCTAGGAGGATTTTaGATGTTGTATCTACCTCCTTTGAGTTGGGGGAGTGGTAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: SFLFQLLTHRLLGGF*MLYLPPLSWGSGRD Trigger: GTCTCTACCACTCCCCCAACTCAAAGGAGGTAGATACAACATCAAAAATCCTCCTAGCAATCTGTGAGTGAGAAGCTGGAACAGAAAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR TCA 90 bp | AATAGAGGCTTTAACTATACACATCGACTAGAGACACAGATGCAGGTGGCCTCACCCTCCACTCCCATCTaGCAATATTTCGGCAATGTT | + |
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Preference number: 2 (lower is better) Translates to: NRGFNYTHRLETQMQVASPSTPI*QYFGNV Trigger: AACATTGCCGAAATATTGTCAGATGGGAGTGGAGGG...TGAGGCCACCTGCATCTGTGTCTCTAGTCGATGTGTATAGTTAAAGCCTCTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR CCA 90 bp | GCCCATTGTGAGACTGCCAGATATTTGAGAACTTCAGAGATCCCACTTATAATTAGTGGTAGAGACAGGTaGATTCCAGGGACTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: AHCETARYLRTSEIPLIISGRDR*IPGTCW Trigger: CCAGCAAGTCCCTGGAATCCACCTGTCTCTACCACT...AATTATAAGTGGGATCTCTGAAGTTCTCAAATATCTGGCAGTCTCACAATGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR TCA 90 bp | GAACTCAGAGATCTGCTGCATCTGCCTCCAGAGATTAAAGGTGCTGAGATTAAAAGACCCTGTGACATGTaGAGTTCATATCTCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: ELRDLLHLPPEIKGAEIKRPCDM*SSYLSV Trigger: GACACTGAGATATGAACTTCACATGTCACAGGGTCT...TTTAATCTCAGCACCTTTAATCTCTGGAGGCAGATGCAGCAGATCTCTGAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| 3UTR-3UTR TCA 90 bp | GAAGCTTTCACCAATTGTGTGATCTCTGGCATATTCTCTACGTGTGACATGTCAAGACTGCCAGATATTTaGGAACTTCAGAGATCCCAC | + |
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Preference number: 2 (lower is better) Translates to: EAFTNCVISGIFSTCDMSRLPDI*ELQRSH Trigger: GTGGGATCTCTGAAGTTCTCAAATATCTGGCAGTCT...TGACATGTCACACGTAGAGAATATGCCAGAGATCACACAATTGGTGAAAGCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR CCA 90 bp | CATGTGAAGTTCATATCTCAGTGTCCATACCTAAAGTTTTATTGGAACATAGTCAGGCACAGAATCAAGTaGGTAGTGGCAGTCCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: HVKFISQCPYLKFYWNIVRHRIK*VVAVLG Trigger: CCCTAGGACTGCCACTACCCACTTGATTCTGTGCCT...GACTATGTTCCAATAAAACTTTAGGTATGGACACTGAGATATGAACTTCACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| 3UTR-3UTR GCA 90 bp | ACACCTTTATTTAGAACTATTCAGGGTATGTGTTCAAAATGGAAACGTGGAGGGAACTCAGAGATCTGCTaGATCTGCCTCCAGAGATTA | + |
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Preference number: 2 (lower is better) Translates to: TPLFRTIQGMCSKWKRGGNSEIC*ICLQRL Trigger: TAATCTCTGGAGGCAGATGCAGCAGATCTCTGAGTT...CCCTCCACGTTTCCATTTTGAACACATACCCTGAATAGTTCTAAATAAAGGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| 3UTR CAA 90 bp | AAAGACGTTAAAGGACTCAGCTCGATTAAAATAAATTCCAAGGTGTaGATACAGCTTTCTGTTCCAGCTTCTCACTCACAGATTGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: KDVKGLSSIKINSKV*IQLSVPASHSQIAR Trigger: CCTAGCAATCTGTGAGTGAGAAGCTGGAACAGAAAGCTGTATCAACACCTTGGAATTTATTTTAATCGAGCTGAGTCCTTTAACGTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR CCA 90 bp | GAACTAGCTGAAGTAGTTGATTTTATCCAGAAATACAATTTTCCTCTCCTCCACAATTGTGGTAGAAAGTaGGTGGCCCTCCAAAGACTA | + |
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Preference number: 2 (lower is better) Translates to: ELAEVVDFIQKYNFPLLHNCGRK*VALQRL Trigger: TAGTCTTTGGAGGGCCACCCACTTTCTACCACAATT...GTGGAGGAGAGGAAAATTGTATTTCTGGATAAAATCAACTACTTCAGCTAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| 3UTR CAA 90 bp | TTATCCACTAGCCACCTCCTCTATCCACAGTTGGTTCATAGCCACTaGTCTTCATGGCTAAATACTAAATCTTCTAAGGTAGGAATAAAA | + |
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Preference number: 2 (lower is better) Translates to: LSTSHLLYPQLVHSH*SSWLNTKSSKVGIK Trigger: TTTTATTCCTACCTTAGAAGATTTAGTATTTAGCCATGAAGACAAGTGGCTATGAACCAACTGTGGATAGAGGAGGTGGCTAGTGGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR TCA 90 bp | GAACTAGCTGAAGTAGTTGATTTTATCCAGAAATACAATTTTCCTCTCCTCCACAGACCAAATCTAACCTaGAATCATGCAAAGCACTTT | + |
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Preference number: 2 (lower is better) Translates to: ELAEVVDFIQKYNFPLLHRPNLT*NHAKHF Trigger: AAAGTGCTTTGCATGATTTCAGGTTAGATTTGGTCT...GTGGAGGAGAGGAAAATTGTATTTCTGGATAAAATCAACTACTTCAGCTAGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| 3UTR CCA 72 bp | TGGCCAGGCCTGGGCAGTCAGATGGCAGCACCCAGCTaGAGCGATTTAATTGCTCTTGCACGAGCCTCACTT | + |
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Preference number: 3 (lower is better) Translates to: WPGLGSQMAAPS*SDLIALARASL Trigger: AAGTGAGGCTCGTGCAAGAGCAATTAAATCGCTCCAGCTGGGTGCTGCCATCTGACTGCCCAGGCCTGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR GCA 72 bp | TGGGGGAGTGGTAGAGACAGGTGGATTCCAGGGACTTaGTGGCCAGCCAGTCTAGACAAAATGGTGAACTCC | + |
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Preference number: 3 (lower is better) Translates to: WGSGRDRWIPGT*WPASLDKMVNS Trigger: GGAGTTCACCATTTTGTCTAGACTGGCTGGCCAGCAAGTCCCTGGAATCCACCTGTCTCTACCACTCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR GCA 72 bp | CTTGCGAGTGTGTGTGTGTGGACATGGGTGTCAAGGTaGCCATGTGGAAGCCAGAGGAAGTTGATTCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: LASVCVWTWVSR*PCGSQRKLIPS Trigger: GGAGGGAATCAACTTCCTCTGGCTTCCACATGGGCACCTTGACACCCATGTCCACACACACACACTCGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR CCA 72 bp | GGGAGTGGTAGAGACAGGTGGATTCCAGGGACTTGCTaGCCAGCCAGTCTAGACAAAATGGTGAACTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: GSGRDRWIPGTC*PASLDKMVNSR Trigger: CCTGGAGTTCACCATTTTGTCTAGACTGGCTGGCCAGCAAGTCCCTGGAATCCACCTGTCTCTACCACTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR CCA 72 bp | TGTGTGTGTGTGGACATGGGTGTCAAGGTGCCCATGTaGAAGCCAGAGGAAGTTGATTCCCTCCCCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: CVCVDMGVKVPM*KPEEVDSLPSL Trigger: GAGAGAGGGGAGGGAATCAACTTCCTCTGGCTTCCACATGGGCACCTTGACACCCATGTCCACACACACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR CCA 72 bp | CCCAAGGGGATAATTTCAGAGGAGTCACAACTATATTaGCCAGGCCTGGGCAGTCAGATGGCAGCACCCAGC | + |
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Preference number: 3 (lower is better) Translates to: PKGIISEESQLY*PGLGSQMAAPS Trigger: GCTGGGTGCTGCCATCTGACTGCCCAGGCCTGGCCAATATAGTTGTGACTCCTCTGAAATTATCCCCTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR CAA 90 bp | GCCAGGCCTGGGCAGTCAGATGGCAGCACCCAGCTGGAGCGATTTAATTGCTCTCTCCTCTATCCACAGTaGGTTCATAGCCACTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: ARPGQSDGSTQLERFNCSLLYPQ*VHSHLS Trigger: AGACAAGTGGCTATGAACCAACTGTGGATAGAGGAG...AGAGCAATTAAATCGCTCCAGCTGGGTGCTGCCATCTGACTGCCCAGGCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR CCA 72 bp | CTGATGTGCCACTACATTTGGATTTTGCACAGGTGCTaGGGATCCAAACTCAGGTTCCCCACGCTTGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LMCHYIWILHRC*GSKLRFPTLEQ Trigger: CTGCTCAAGCGTGGGGAACCTGAGTTTGGATCCCCAGCACCTGTGCAAAATCCAAATGTAGTGGCACATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR CAA 90 bp | GCCAGGCCTGGGCAGTCAGATGGCAGCACCCAGCTGGAGCGATTTAATTGCTCTTATTGTTTTATTTGCTaGCGAGTGTGTGTGTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: ARPGQSDGSTQLERFNCSYCFIC*RVCVCG Trigger: TCCACACACACACACTCGCAAGCAAATAAAACAATA...AGAGCAATTAAATCGCTCCAGCTGGGTGCTGCCATCTGACTGCCCAGGCCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR GCA 72 bp | GCCAGGCTGGCCTTGAACTCAGAGATCTGCTGCATCTaGCTCCAGAGATTAAAGGTGCTGAGATTAAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: ARLALNSEICCI*LQRLKVLRLKE Trigger: CTCCTTTAATCTCAGCACCTTTAATCTCTGGAGGCAGATGCAGCAGATCTCTGAGTTCAAGGCCAGCCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| 3UTR GCA 72 bp | TCTCTCTCTCTCTCTCTCCCACCCATCACACTGATGTaGCACTACATTTGGATTTTGCACAGGTGCTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: SLSLSLPPITLM*HYIWILHRCWG Trigger: TCCCCAGCACCTGTGCAAAATCCAAATGTAGTGGCACATCAGTGTGATGGGTGGGAGAGAGAGAGAGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR CAA 90 bp | CAGATTGCTAGGAGGATTTTTGATGTTGTATCTACCTCCTTTGAGTTGGGGGAGGTGGATTCCAGGGACTaGCTGGCCAGCCAGTCTAGA | + |
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Preference number: 3 (lower is better) Translates to: QIARRIFDVVSTSFELGEVDSRD*LASQSR Trigger: TCTAGACTGGCTGGCCAGCAAGTCCCTGGAATCCAC...CTCCCCCAACTCAAAGGAGGTAGATACAACATCAAAAATCCTCCTAGCAATCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR CCA 72 bp | TTGTTTTATTTGCTTGCGAGTGTGTGTGTGTGGACATaGGTGTCAAGGTGCCCATGTGGAAGCCAGAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: LFYLLASVCVWT*VSRCPCGSQRK Trigger: CTTCCTCTGGCTTCCACATGGGCACCTTGACACCCATGTCCACACACACACACTCGCAAGCAAATAAAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR CAA 90 bp | AAATCTGCCTGTCTCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTCCCCACTTTTGCACTTTTGTTTaGTTGAGACAGGGCTTCATC | + |
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Preference number: 3 (lower is better) Translates to: KSACLCLQSAGTKGVCPHFCTFV*LRQGFI Trigger: GATGAAGCCCTGTCTCAACAAAACAAAAGTGCAAAA...GTGGGGACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGAGACAGGCAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| 3UTR CCA 72 bp | GGAGGATTTTTGATGTTGTATCTACCTCCTTTGAGTTaGGGGAGTGGTAGAGACAGGTGGATTCCAGGGACT | + |
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Preference number: 3 (lower is better) Translates to: GGFLMLYLPPLS*GSGRDRWIPGT Trigger: AGTCCCTGGAATCCACCTGTCTCTACCACTCCCCCAACTCAAAGGAGGTAGATACAACATCAAAAATCCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| 3UTR-3UTR CAA 90 bp | GCATTTTATCCACTAGCCACCTCCTCTATCCACAGTTGGTTCATAGCCACTTGTGAGACTGCCAGATATTaGAGAACTTCAGAGATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: AFYPLATSSIHSWFIATCETARY*RTSEIP Trigger: TGGGATCTCTGAAGTTCTCAAATATCTGGCAGTCTC...ACAAGTGGCTATGAACCAACTGTGGATAGAGGAGGTGGCTAGTGGATAAAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| 3UTR-3UTR CAA 90 bp | GCATTTTATCCACTAGCCACCTCCTCTATCCACAGTTGGTTCATAGCCACTTGTATAAATTCCAAGGTGTaGATACAGCTTTCTGTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: AFYPLATSSIHSWFIATCINSKV*IQLSVP Trigger: TGGAACAGAAAGCTGTATCAACACCTTGGAATTTAT...ACAAGTGGCTATGAACCAACTGTGGATAGAGGAGGTGGCTAGTGGATAAAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| 3UTR-3UTR CAA 90 bp | ACACCTTTATTTAGAACTATTCAGGGTATGTGTTCAAAATGGAAACGTGGAGGGTGCACTTTTGTTTTGTaGAGACAGGGCTTCATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TPLFRTIQGMCSKWKRGGCTFVL*RQGFIP Trigger: AGGGATGAAGCCCTGTCTCAACAAAACAAAAGTGCA...CCCTCCACGTTTCCATTTTGAACACATACCCTGAATAGTTCTAAATAAAGGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGGAAAATGTCATGTGTGAATAGAGGCTTTAACTATACACATCGACTAGAGTTGTATCTACCTCCTTaGAGTTGGGGGAGTGGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: ERKMSCVNRGFNYTHRLELYLPP*SWGSGR Trigger: TCTACCACTCCCCCAACTCAAAGGAGGTAGATACAA...CTCTAGTCGATGTGTATAGTTAAAGCCTCTATTCACACATGACATTTTCCTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| 3UTR-3UTR CAA 90 bp | TTATTTAGAACTATTCAGGGTATGTGTTCAAAATGGAAACGTGGAGGGGAAGAGTGGCTCTTGGATATTTaGAAAATGAGGTTTGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LFRTIQGMCSKWKRGGEEWLLDI*KMRFGA Trigger: GGCTCCAAACCTCATTTTCAAAATATCCAAGAGCCA...CTCTTCCCCTCCACGTTTCCATTTTGAACACATACCCTGAATAGTTCTAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| 3UTR TCA 72 bp | ACATTCACATTCTTTAAGAAGCTTTCACCAATTGTGTaGTCTCTGGCATATTCTCTACGTGTGACATGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TFTFFKKLSPIV*SLAYSLRVTCH Trigger: ATGACATGTCACACGTAGAGAATATGCCAGAGATCACACAATTGGTGAAAGCTTCTTAAAGAATGTGAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| 3UTR-3UTR CAA 90 bp | CATGTGAAGTTCATATCTCAGTGTCCATACCTAAAGTTTTATTGGAACATAGTCCCTCCAAAGACTAAATaGTTCCTCATAACAGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HVKFISQCPYLKFYWNIVPPKTK*FLITAR Trigger: TCTTGCTGTTATGAGGAACAATTTAGTCTTTGGAGG...GACTATGTTCCAATAAAACTTTAGGTATGGACACTGAGATATGAACTTCACATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| 3UTR CCA 72 bp | CTCTATCCACAGTTGGTTCATAGCCACTTGTCTTCATaGCTAAATACTAAATCTTCTAAGGTAGGAATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LYPQLVHSHLSS*LNTKSSKVGIK Trigger: TTTTATTCCTACCTTAGAAGATTTAGTATTTAGCCATGAAGACAAGTGGCTATGAACCAACTGTGGATAGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR CCA 90 bp | CAACTATATTGGCCAGGCCTGGGCAGTCAGATGGCAGCACCCAGCTGGAGCGATCTCCTTGCCCCGCGCTaGCCGCAGTTGCAGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLYWPGLGSQMAAPSWSDLLAPR*PQLQLQ Trigger: CTGGAGCTGCAACTGCGGCCAGCGCGGGGCAAGGAG...ATCGCTCCAGCTGGGTGCTGCCATCTGACTGCCCAGGCCTGGCCAATATAGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR TCA 90 bp | TCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTCCCCACGCCTGGTTTTGCAAGAGCCAGGCCCCAGTaGCCACACGGACGCGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SASRVLELKACVPTPGFARARPQ*PHGRGS Trigger: GCTACCGCGTCCGTGTGGTCACTGGGGCCTGGCTCT...TGCAAAACCAGGCGTGGGGACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR TCA 90 bp | GCCAGGCCTGGGCAGTCAGATGGCAGCACCCAGCTGGAGCGATTTAATTGCTCTCTTGTCCCCGGCCCCTaGACTGTGATGAGGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARPGQSDGSTQLERFNCSLVPGP*TVMRLQ Trigger: CTGCAACCTCATCACAGTTCAGGGGCCGGGGACAAG...AGAGCAATTAAATCGCTCCAGCTGGGTGCTGCCATCTGACTGCCCAGGCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR TCA 90 bp | TCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTCCCCACGCCTGGTTTTGCAACAGCCCCACTTCAGTaGTCTCCCGACACCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SASRVLELKACVPTPGFATAPLQ*SPDTRP Trigger: AGGCCTGGTGTCGGGAGATCACTGAAGTGGGGCTGT...TGCAAAACCAGGCGTGGGGACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTCCCCACGCCTGGTTTTGCAGATAGGGTGCAGTCCTaGGAGGCATCTCATGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SASRVLELKACVPTPGFADRVQS*EASHGG Trigger: GCCACCATGAGATGCCTCCCAGGACTGCACCCTATC...TGCAAAACCAGGCGTGGGGACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | AGTTGGGGGAGTGGTAGAGACAGGTGGATTCCAGGGACTTGCTGGCCAGCCAGTTTTCACAAACTGCAGTaGCCCCAAGTCCTCGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SWGSGRDRWIPGTCWPASFHKLQ*PQVLGN Trigger: GTTCCCGAGGACTTGGGGCCACTGCAGTTTGTGAAA...ACTGGCTGGCCAGCAAGTCCCTGGAATCCACCTGTCTCTACCACTCCCCCAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR CCA 90 bp | GGAGTCACAACTATATTGGCCAGGCCTGGGCAGTCAGATGGCAGCACCCAGCTGGGCAGCCAGGTACTGTaGTTCTCCTCGGATCACATT | + |
|
Preference number: 4 (lower is better) Translates to: GVTTILARPGQSDGSTQLGSQVL*FSSDHI Trigger: AATGTGATCCGAGGAGAACCACAGTACCTGGCTGCC...CAGCTGGGTGCTGCCATCTGACTGCCCAGGCCTGGCCAATATAGTTGTGACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR TCA 90 bp | TTATCCACTAGCCACCTCCTCTATCCACAGTTGGTTCATAGCCACTTGTCTTCAAGAGCCAGGCCCCAGTaGCCACACGGACGCGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSTSHLLYPQLVHSHLSSRARPQ*PHGRGS Trigger: GCTACCGCGTCCGTGTGGTCACTGGGGCCTGGCTCT...TGAAGACAAGTGGCTATGAACCAACTGTGGATAGAGGAGGTGGCTAGTGGATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR TCA 90 bp | ACTGAGAAATCTGCCTGTCTCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTCTTGTCCCCGGCCCCTaGACTGTGATGAGGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TEKSACLCLQSAGTKGVCLVPGP*TVMRLQ Trigger: CTGCAACCTCATCACAGTTCAGGGGCCGGGGACAAG...ACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGAGACAGGCAGATTTCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR TCA 90 bp | GGAGTCACAACTATATTGGCCAGGCCTGGGCAGTCAGATGGCAGCACCCAGCTGGGGTATAAACACGTTTaGGGCCCATTTCCAGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: GVTTILARPGQSDGSTQLGYKHV*GPFPEP Trigger: GGGTTCTGGAAATGGGCCTCAAACGTGTTTATACCC...CAGCTGGGTGCTGCCATCTGACTGCCCAGGCCTGGCCAATATAGTTGTGACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCCAGAGATTAAAGGTGCTGAGATTAAAGGAGTGCACCACCACACCTGGAGGGCAGTACCAGTCTaGAGGGCAGAGAGGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPPEIKGAEIKGVHHHTWRAVPV*RAERWS Trigger: GCTCCACCTCTCTGCCCTCCAGACTGGTACTGCCCT...CCAGGTGTGGTGGTGCACTCCTTTAATCTCAGCACCTTTAATCTCTGGAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTCCCCACGCCTGGTTTTGCAGGCAGCCAGGTACTGTaGTTCTCCTCGGATCACATT | + |
|
Preference number: 4 (lower is better) Translates to: SASRVLELKACVPTPGFAGSQVL*FSSDHI Trigger: AATGTGATCCGAGGAGAACCACAGTACCTGGCTGCC...TGCAAAACCAGGCGTGGGGACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR TCA 90 bp | TCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTCCCCACGCCTGGTTTTGCATCCGCTGCTATTGTCTaGGGTAAGCCTTCTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SASRVLELKACVPTPGFASAAIV*GKPSFQ Trigger: CTGGAAAGAAGGCTTACCTCAGACAATAGCAGCGGA...TGCAAAACCAGGCGTGGGGACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR GCA 90 bp | ACTGAGAAATCTGCCTGTCTCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTAGTTTCGCCTCCCGGTaGTCCCCAACCAGCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TEKSACLCLQSAGTKGVCSFASR*SPTSHK Trigger: TTTGTGGCTGGTTGGGGAGCACCGGGAGGCGAAACT...ACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGAGACAGGCAGATTTCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | AGTTGGGGGAGTGGTAGAGACAGGTGGATTCCAGGGACTTGCTGGCCAGCCAGTACCTCAGCCACCAGATaGGTGTTCAGCAAATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SWGSGRDRWIPGTCWPASTSATR*VFSKWN Trigger: ATTCCATTTGCTGAACACCCATCTGGTGGCTGAGGT...ACTGGCTGGCCAGCAAGTCCCTGGAATCCACCTGTCTCTACCACTCCCCCAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| 3UTR CAA 72 bp | ACCCAAGGGGATAATTTCAGAGGAGTCACAACTATATaGGCCAGGCCTGGGCAGTCAGATGGCAGCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQGDNFRGVTTI*ARPGQSDGSTQ Trigger: CTGGGTGCTGCCATCTGACTGCCCAGGCCTGGCCAATATAGTTGTGACTCCTCTGAAATTATCCCCTTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR TCA 90 bp | AAATCTGCCTGTCTCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTCCCCACTCACATACCTGGCAGTaGCTTCCCAGAGCTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSACLCLQSAGTKGVCPHSHTWQ*LPRAVK Trigger: CTTTACAGCTCTGGGAAGTCACTGCCAGGTATGTGA...GTGGGGACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGAGACAGGCAGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTCTCTCTCCCACCCATCACACTGATGTGCCACTACATTTGGATTTTGAGGGCAGTACCAGTCTaGAGGGCAGAGAGGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLPPITLMCHYIWILRAVPV*RAERWS Trigger: GCTCCACCTCTCTGCCCTCCAGACTGGTACTGCCCT...CAAAATCCAAATGTAGTGGCACATCAGTGTGATGGGTGGGAGAGAGAGAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR CCA 90 bp | TCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTCCCCACGCCTGGTTTTGCATGGAGCTCCTGCAGTTaGAAATCTGAATTTCGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SASRVLELKACVPTPGFAWSSCS*KSEFRT Trigger: GGTCCGAAATTCAGATTTCCAACTGCAGGAGCTCCA...TGCAAAACCAGGCGTGGGGACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTCCCCACGCCTGGTTTTGCATGGGTGTTCAGCAAATaGAATTGGAGCTCCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SASRVLELKACVPTPGFAWVFSK*NWSSCS Trigger: ACTGCAGGAGCTCCAATTCCATTTGCTGAACACCCA...TGCAAAACCAGGCGTGGGGACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCCAGAGATTAAAGGTGCTGAGATTAAAGGAGTGCACCACCACACCTGGCCATCTGAGATGAGCTaGGTCCGGCTTCGCGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPPEIKGAEIKGVHHHTWPSEMS*VRLRVL Trigger: TAACACGCGAAGCCGGACCCAGCTCATCTCAGATGG...CCAGGTGTGGTGGTGCACTCCTTTAATCTCAGCACCTTTAATCTCTGGAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR TCA 90 bp | GCATTTTATCCACTAGCCACCTCCTCTATCCACAGTTGGTTCATAGCCACTTGTGGTCCATCCTCAGCATaGCAAGAGGGGCAGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AFYPLATSSIHSWFIATCGPSSA*QEGQPG Trigger: ACCTGGCTGCCCCTCTTGTCATGCTGAGGATGGACC...ACAAGTGGCTATGAACCAACTGTGGATAGAGGAGGTGGCTAGTGGATAAAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR TCA 90 bp | TCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTCCCCACGCCTGGTTTTGCACCTGTGCTCACTACCTaGTCAAATATTCCTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SASRVLELKACVPTPGFAPVLTT*SNIPPS Trigger: AGATGGAGGAATATTTGATCAGGTAGTGAGCACAGG...TGCAAAACCAGGCGTGGGGACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR GCA 90 bp | ACTGAGAAATCTGCCTGTCTCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTAGCTTGAAGATAGGGTaGAGTCCTGGGAGGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: TEKSACLCLQSAGTKGVCSLKIG*SPGRHL Trigger: GAGATGCCTCCCAGGACTGCACCCTATCTTCAAGCT...ACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGAGACAGGCAGATTTCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | ACTGAGAAATCTGCCTGTCTCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTTTTCACAAACTGCAGTaGCCCCAAGTCCTCGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TEKSACLCLQSAGTKGVCFHKLQ*PQVLGN Trigger: GTTCCCGAGGACTTGGGGCCACTGCAGTTTGTGAAA...ACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGAGACAGGCAGATTTCTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | GGCCTTGAACTCAGAGATCTGCTGCATCTGCCTCCAGAGATTAAAGGTGCTGAGAGCCTTCTTTCCAGGTaGCCCAGCAGTAGGTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLELRDLLHLPPEIKGAESLLSR*PSSRSV Trigger: AACAGACCTACTGCTGGGCCACCTGGAAAGAAGGCT...CTCAGCACCTTTAATCTCTGGAGGCAGATGCAGCAGATCTCTGAGTTCAAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTCTCTCTCCCACCCATCACACTGATGTGCCACTACATTTGGATTTTGGATAGGGTGCAGTCCTaGGAGGCATCTCATGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLPPITLMCHYIWILDRVQS*EASHGG Trigger: GCCACCATGAGATGCCTCCCAGGACTGCACCCTATC...CAAAATCCAAATGTAGTGGCACATCAGTGTGATGGGTGGGAGAGAGAGAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR TCA 90 bp | GAACTCAGAGATCTGCTGCATCTGCCTCCAGAGATTAAAGGTGCTGAGATTAAAGGTCCATCCTCAGCATaGCAAGAGGGGCAGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ELRDLLHLPPEIKGAEIKGPSSA*QEGQPG Trigger: ACCTGGCTGCCCCTCTTGTCATGCTGAGGATGGACC...TTTAATCTCAGCACCTTTAATCTCTGGAGGCAGATGCAGCAGATCTCTGAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR TCA 90 bp | GAACTCAGAGATCTGCTGCATCTGCCTCCAGAGATTAAAGGTGCTGAGATTAAATTCCTCCATCTGAGATaGGCTGGGTCCGGCTTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: ELRDLLHLPPEIKGAEIKFLHLR*AGSGFA Trigger: CGCGAAGCCGGACCCAGCTCATCTCAGATGGAGGAA...TTTAATCTCAGCACCTTTAATCTCTGGAGGCAGATGCAGCAGATCTCTGAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR GCA 90 bp | GCATTTTATCCACTAGCCACCTCCTCTATCCACAGTTGGTTCATAGCCACTTGTAGTTTCGCCTCCCGGTaGTCCCCAACCAGCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: AFYPLATSSIHSWFIATCSFASR*SPTSHK Trigger: TTTGTGGCTGGTTGGGGAGCACCGGGAGGCGAAACT...ACAAGTGGCTATGAACCAACTGTGGATAGAGGAGGTGGCTAGTGGATAAAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR GCA 90 bp | TCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTCCCCACGCCTGGTTTTGCAACTGTGTGCTGTTTGTaGAGTTTCACAAACTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SASRVLELKACVPTPGFATVCCL*SFTNCS Trigger: ACTGCAGTTTGTGAAACTGCACAAACAGCACACAGT...TGCAAAACCAGGCGTGGGGACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | ACACCTTTATTTAGAACTATTCAGGGTATGTGTTCAAAATGGAAACGTGGAGGGCTCCTTGCCCCGCGCTaGCCGCAGTTGCAGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPLFRTIQGMCSKWKRGGLLAPR*PQLQLQ Trigger: CTGGAGCTGCAACTGCGGCCAGCGCGGGGCAAGGAG...CCCTCCACGTTTCCATTTTGAACACATACCCTGAATAGTTCTAAATAAAGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| 3UTR CAA 72 bp | CTCTCTCCCACCCATCACACTGATGTGCCACTACATTaGGATTTTGCACAGGTGCTGGGGATCCAAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSPTHHTDVPLH*DFAQVLGIQTQ Trigger: CTGAGTTTGGATCCCCAGCACCTGTGCAAAATCCAAATGTAGTGGCACATCAGTGTGATGGGTGGGAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR TCA 90 bp | TCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTCCCCACGCCTGGTTTTGCATTTGGTCCTTGGGTCTaGGAAATATTTTTCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SASRVLELKACVPTPGFAFGPWV*EIFFCV Trigger: CACACAGAAAAATATTTCTCAGACCCAAGGACCAAA...TGCAAAACCAGGCGTGGGGACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | GGCCTTGAACTCAGAGATCTGCTGCATCTGCCTCCAGAGATTAAAGGTGCTGAGACCTCAGCCACCAGATaGGTGTTCAGCAAATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLELRDLLHLPPEIKGAETSATR*VFSKWN Trigger: ATTCCATTTGCTGAACACCCATCTGGTGGCTGAGGT...CTCAGCACCTTTAATCTCTGGAGGCAGATGCAGCAGATCTCTGAGTTCAAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | AAATCTGCCTGTCTCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTCCCCACAGTCTCTTCTCCTCATaGAATCTCATATTTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSACLCLQSAGTKGVCPHSLFSS*NLIFGG Trigger: TCCTCCAAATATGAGATTCCATGAGGAGAAGAGACT...GTGGGGACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGAGACAGGCAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTCCCACCCATCACACTGATGTGCCACTACATTTGGATTTTGCACAGGTGGGTGTTCAGCAAATaGAATTGGAGCTCCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLPPITLMCHYIWILHRWVFSK*NWSSCS Trigger: ACTGCAGGAGCTCCAATTCCATTTGCTGAACACCCA...CCTGTGCAAAATCCAAATGTAGTGGCACATCAGTGTGATGGGTGGGAGAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR GCA 90 bp | ACACCTTTATTTAGAACTATTCAGGGTATGTGTTCAAAATGGAAACGTGGAGGGGGTACCATGTCTGGCTaGAGGCGACCCAGGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TPLFRTIQGMCSKWKRGGGTMSG*RRPRCH Trigger: ATGGCACCTGGGTCGCCTGCAGCCAGACATGGTACC...CCCTCCACGTTTCCATTTTGAACACATACCCTGAATAGTTCTAAATAAAGGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR GCA 90 bp | GTGTTGATACAGCTTTCTGTTCCAGCTTCTCACTCACAGATTGCTAGGAGGATTACCTTGAAGATAGGGTaGAGTCCTGGGAGGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLIQLSVPASHSQIARRITLKIG*SPGRHL Trigger: GAGATGCCTCCCAGGACTGCACCCTATCTTCAAGGT...AATCCTCCTAGCAATCTGTGAGTGAGAAGCTGGAACAGAAAGCTGTATCAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR CCA 90 bp | CAGATTGCTAGGAGGATTTTTGATGTTGTATCTACCTCCTTTGAGTTGGGGGAGAGCCTTCTTTCCAGGTaGCCCAGCAGTAGGTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QIARRIFDVVSTSFELGESLLSR*PSSRSV Trigger: AACAGACCTACTGCTGGGCCACCTGGAAAGAAGGCT...CTCCCCCAACTCAAAGGAGGTAGATACAACATCAAAAATCCTCCTAGCAATCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR TCA 90 bp | GTGTTGATACAGCTTTCTGTTCCAGCTTCTCACTCACAGATTGCTAGGAGGATTTGGCCCCAGAAGATCTaGTCAAAGTCTTCCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VLIQLSVPASHSQIARRIWPQKI*SKSSRW Trigger: CCATCTGGAAGACTTTGATCAGATCTTCTGGGGCCA...AATCCTCCTAGCAATCTGTGAGTGAGAAGCTGGAACAGAAAGCTGTATCAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR TCA 90 bp | TGTTTTATTTGCTTGCGAGTGTGTGTGTGTGGACATGGGTGTCAAGGTGCCCATACAGGGATCCATTCTTaGGTTCTTTCTCCAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CFICLRVCVCGHGCQGAHTGIHS*VLSPTE Trigger: CTCAGTTGGAGAAAGAACTCAAGAATGGATCCCTGT...ATGGGCACCTTGACACCCATGTCCACACACACACACTCGCAAGCAAATAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR TCA 90 bp | GAACTCAGAGATCTGCTGCATCTGCCTCCAGAGATTAAAGGTGCTGAGATTAAACTGCTTGAAATTGGCTaGGCACAGCTTTGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ELRDLLHLPPEIKGAEIKLLEIG*AQLWSL Trigger: CAAGGACCAAAGCTGTGCTCAGCCAATTTCAAGCAG...TTTAATCTCAGCACCTTTAATCTCTGGAGGCAGATGCAGCAGATCTCTGAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCCAGAGATTAAAGGTGCTGAGATTAAAGGAGTGCACCACCACACCTGGCAAATTGTCCAAATCTaGTTGAAATTGGCTGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPPEIKGAEIKGVHHHTWQIVQI*LKLAEH Trigger: GTGCTCAGCCAATTTCAAGCAGATTTGGACAATTTG...CCAGGTGTGGTGGTGCACTCCTTTAATCTCAGCACCTTTAATCTCTGGAGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | TTATTTAGAACTATTCAGGGTATGTGTTCAAAATGGAAACGTGGAGGGGAAGAGTGGAGGGCAGAGAGGTaGAGCGTCTCAAAAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LFRTIQGMCSKWKRGGEEWRAER*SVSKAW Trigger: CCATGCTTTTGAGACGCTCCACCTCTCTGCCCTCCA...CTCTTCCCCTCCACGTTTCCATTTTGAACACATACCCTGAATAGTTCTAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | GAACTAGCTGAAGTAGTTGATTTTATCCAGAAATACAATTTTCCTCTCCTCCACCCATACCAGTCCAGCTaGCCCTGGTTGATGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELAEVVDFIQKYNFPLLHPYQSS*PWLMAA Trigger: TGCTGCCATCAACCAGGGCCAGCTGGACTGGTATGG...GTGGAGGAGAGGAAAATTGTATTTCTGGATAAAATCAACTACTTCAGCTAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | ACTGAGAAATCTGCCTGTCTCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTAAATATTTTTCTGTGTaGTGTCCTAGAGGTACCATG | + |
|
Preference number: 4 (lower is better) Translates to: TEKSACLCLQSAGTKGVCKYFSV*CPRGTM Trigger: CATGGTACCTCTAGGACACCACACAGAAAAATATTT...ACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGAGACAGGCAGATTTCTCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR TCA 90 bp | GAACTCAGAGATCTGCTGCATCTGCCTCCAGAGATTAAAGGTGCTGAGATTAAAACAGGGATCCATTCTTaGGTTCTTTCTCCAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELRDLLHLPPEIKGAEIKTGIHS*VLSPTE Trigger: CTCAGTTGGAGAAAGAACTCAAGAATGGATCCCTGT...TTTAATCTCAGCACCTTTAATCTCTGGAGGCAGATGCAGCAGATCTCTGAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR GCA 90 bp | TTATTTAGAACTATTCAGGGTATGTGTTCAAAATGGAAACGTGGAGGGGAAGAGGGCCGCCTCCACCTGTaGTCACTACCTGATCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LFRTIQGMCSKWKRGGEEGRLHL*SLPDQI Trigger: TATTTGATCAGGTAGTGAGCACAGGTGGAGGCGGCC...CTCTTCCCCTCCACGTTTCCATTTTGAACACATACCCTGAATAGTTCTAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | GAAAGGAAAATGTCATGTGTGAATAGAGGCTTTAACTATACACATCGACTAGAGTGGAGGGCAGAGAGGTaGAGCGTCTCAAAAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ERKMSCVNRGFNYTHRLEWRAER*SVSKAW Trigger: CCATGCTTTTGAGACGCTCCACCTCTCTGCCCTCCA...CTCTAGTCGATGTGTATAGTTAAAGCCTCTATTCACACATGACATTTTCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR CCA 90 bp | TTATCCACTAGCCACCTCCTCTATCCACAGTTGGTTCATAGCCACTTGTCTTCATTCAGCAAATGGAATTaGAGCTCCTGCAGTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSTSHLLYPQLVHSHLSSFSKWN*SSCSWK Trigger: TTTCCAACTGCAGGAGCTCCAATTCCATTTGCTGAA...TGAAGACAAGTGGCTATGAACCAACTGTGGATAGAGGAGGTGGCTAGTGGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR CCA 90 bp | TTATTTAGAACTATTCAGGGTATGTGTTCAAAATGGAAACGTGGAGGGGAAGAGAGCATAGAGAGCACTTaGGATTCTCAGCAGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LFRTIQGMCSKWKRGGEESIEST*DSQQAS Trigger: CGAGGCCTGCTGAGAATCCCAAGTGCTCTCTATGCT...CTCTTCCCCTCCACGTTTCCATTTTGAACACATACCCTGAATAGTTCTAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| 3UTR CAA 72 bp | CTTCTCACTCACAGATTGCTAGGAGGATTTTTGATGTaGTATCTACCTCCTTTGAGTTGGGGGAGTGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLTHRLLGGFLM*YLPPLSWGSGR Trigger: TCTACCACTCCCCCAACTCAAAGGAGGTAGATACAACATCAAAAATCCTCCTAGCAATCTGTGAGTGAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| 3UTR CAA 72 bp | TTCCAGCTTCTCACTCACAGATTGCTAGGAGGATTTTaGATGTTGTATCTACCTCCTTTGAGTTGGGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FQLLTHRLLGGF*MLYLPPLSWGS Trigger: ACTCCCCCAACTCAAAGGAGGTAGATACAACATCAAAAATCCTCCTAGCAATCTGTGAGTGAGAAGCTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR TCA 90 bp | ACACCTTTATTTAGAACTATTCAGGGTATGTGTTCAAAATGGAAACGTGGAGGGGGGTATAAACACGTTTaGGGCCCATTTCCAGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: TPLFRTIQGMCSKWKRGGGYKHV*GPFPEP Trigger: GGGTTCTGGAAATGGGCCTCAAACGTGTTTATACCC...CCCTCCACGTTTCCATTTTGAACACATACCCTGAATAGTTCTAAATAAAGGTGT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR TCA 90 bp | ACACCTTTATTTAGAACTATTCAGGGTATGTGTTCAAAATGGAAACGTGGAGGGAAATATTCCTCCATCTaGGATGAGCTGGGTCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPLFRTIQGMCSKWKRGGKYSSI*DELGPA Trigger: AGCCGGACCCAGCTCATCTCAGATGGAGGAATATTT...CCCTCCACGTTTCCATTTTGAACACATACCCTGAATAGTTCTAAATAAAGGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | TTATCCACTAGCCACCTCCTCTATCCACAGTTGGTTCATAGCCACTTGTCTTCAAGTCTCTTCTCCTCATaGAATCTCATATTTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSTSHLLYPQLVHSHLSSSLFSS*NLIFGG Trigger: TCCTCCAAATATGAGATTCCATGAGGAGAAGAGACT...TGAAGACAAGTGGCTATGAACCAACTGTGGATAGAGGAGGTGGCTAGTGGATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| 3UTR CAA 72 bp | AGCATTTTATCCACTAGCCACCTCCTCTATCCACAGTaGGTTCATAGCCACTTGTCTTCATGGCTAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: SILSTSHLLYPQ*VHSHLSSWLNT Trigger: AGTATTTAGCCATGAAGACAAGTGGCTATGAACCAACTGTGGATAGAGGAGGTGGCTAGTGGATAAAATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| 3UTR CAA 72 bp | TTTACACACCATGCGGCTAAAAACCAGACACCTCCTTaGTCCCTTGAACTAGGTCTGACATTCACATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FTHHAAKNQTPP*SLELGLTFTFF Trigger: AAAGAATGTGAATGTCAGACCTAGTTCAAGGGACAAAGGAGGTGTCTGGTTTTTAGCCGCATGGTGTGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR CCA 90 bp | TTATCCACTAGCCACCTCCTCTATCCACAGTTGGTTCATAGCCACTTGTCTTCAATGGAATCTCATATTTaGAGGAAGGTCATCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: LSTSHLLYPQLVHSHLSSMESHI*RKVILT Trigger: TGTAAGGATGACCTTCCTCCAAATATGAGATTCCAT...TGAAGACAAGTGGCTATGAACCAACTGTGGATAGAGGAGGTGGCTAGTGGATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR TCA 90 bp | CATGTGAAGTTCATATCTCAGTGTCCATACCTAAAGTTTTATTGGAACATAGTCTGGCCCCAGAAGATCTaGTCAAAGTCTTCCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HVKFISQCPYLKFYWNIVWPQKI*SKSSRW Trigger: CCATCTGGAAGACTTTGATCAGATCTTCTGGGGCCA...GACTATGTTCCAATAAAACTTTAGGTATGGACACTGAGATATGAACTTCACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR TCA 90 bp | TTATTTAGAACTATTCAGGGTATGTGTTCAAAATGGAAACGTGGAGGGGAAGAGTTGTCCAAATCTGCTTaGAATTGGCTGAGCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFRTIQGMCSKWKRGGEELSKSA*NWLSTA Trigger: AGCTGTGCTCAGCCAATTTCAAGCAGATTTGGACAA...CTCTTCCCCTCCACGTTTCCATTTTGAACACATACCCTGAATAGTTCTAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR GCA 90 bp | GCCCATTGTGAGACTGCCAGATATTTGAGAACTTCAGAGATCCCACTTATAATTACTGTGTGCTGTTTGTaGAGTTTCACAAACTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AHCETARYLRTSEIPLIITVCCL*SFTNCS Trigger: ACTGCAGTTTGTGAAACTGCACAAACAGCACACAGT...AATTATAAGTGGGATCTCTGAAGTTCTCAAATATCTGGCAGTCTCACAATGGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR CCA 90 bp | GACGTTAAAGGACTCAGCTCGATTAAAATAAATTCCAAGGTGTTGATACAGCTTTGGAGCTCCTGCAGTTaGAAATCTGAATTTCGGACC | + |
|
Preference number: 4 (lower is better) Translates to: DVKGLSSIKINSKVLIQLWSSCS*KSEFRT Trigger: GGTCCGAAATTCAGATTTCCAACTGCAGGAGCTCCA...AAGCTGTATCAACACCTTGGAATTTATTTTAATCGAGCTGAGTCCTTTAACGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| 3UTR CAA 72 bp | AAAGGACTCAGCTCGATTAAAATAAATTCCAAGGTGTaGATACAGCTTTCTGTTCCAGCTTCTCACTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KGLSSIKINSKV*IQLSVPASHSQ Trigger: CTGTGAGTGAGAAGCTGGAACAGAAAGCTGTATCAACACCTTGGAATTTATTTTAATCGAGCTGAGTCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR CCA 90 bp | GAACTAGCTGAAGTAGTTGATTTTATCCAGAAATACAATTTTCCTCTCCTCCACTTCAGCAAATGGAATTaGAGCTCCTGCAGTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ELAEVVDFIQKYNFPLLHFSKWN*SSCSWK Trigger: TTTCCAACTGCAGGAGCTCCAATTCCATTTGCTGAA...GTGGAGGAGAGGAAAATTGTATTTCTGGATAAAATCAACTACTTCAGCTAGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | TTATTTAGAACTATTCAGGGTATGTGTTCAAAATGGAAACGTGGAGGGGAAGAGTTTTCTCGATACTTCTaGAAGACATCTAAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LFRTIQGMCSKWKRGGEEFSRYF*KTSKAL Trigger: CAATGCCTTAGATGTCTTCCAGAAGTATCGAGAAAA...CTCTTCCCCTCCACGTTTCCATTTTGAACACATACCCTGAATAGTTCTAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CCA 90 bp | CATGTGAAGTTCATATCTCAGTGTCCATACCTAAAGTTTTATTGGAACATAGTCATGGAATCTCATATTTaGAGGAAGGTCATCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: HVKFISQCPYLKFYWNIVMESHI*RKVILT Trigger: TGTAAGGATGACCTTCCTCCAAATATGAGATTCCAT...GACTATGTTCCAATAAAACTTTAGGTATGGACACTGAGATATGAACTTCACATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS GCA 90 bp | TTGCCCCGCGCTGGCCGCAGTTGCAGCTCCAGTTTCGCCTCCCGGTaGTCCCCAACCAGCCACAAACGCACTAGGTTGAGGGATCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPRAGRSCSSSFASR*SPTSHKRTRLRDPE Trigger: CTCCGGATCCCTCAACCTAGTGCGTTTGTGGCTGGTTGGGGAGCACCGGGAGGCGAAACTGGAGCTGCAACTGCGGCCAGCGCGGGGCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000329.9 ENSMUST00000108574.3 |
||
| CDS CCA 90 bp | GTCCTCGGGAACGTCGAAGTCAAACTCCTCCTCCTTGCCCCGCGCTaGCCGCAGTTGCAGCTCCAGTTTCGCCTCCCGGTGCTCCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VLGNVEVKLLLLAPR*PQLQLQFRLPVLPN Trigger: GTTGGGGAGCACCGGGAGGCGAAACTGGAGCTGCAACTGCGGCCAGCGCGGGGCAAGGAGGAGGAGTTTGACTTCGACGTTCCCGAGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000329.9 ENSMUST00000108574.3 |
||
| CDS-3UTR CAA 90 bp | AAATCTGCCTGTCTCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTCCCCACCCGCGCTGGCCGCAGTaGCAGCTCCAGTTTCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KSACLCLQSAGTKGVCPHPRWPQ*QLQFRL Trigger: GAGGCGAAACTGGAGCTGCAACTGCGGCCAGCGCGG...GTGGGGACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGAGACAGGCAGATTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CAA 90 bp | TGGGTAGTGGCAGTCCTAGGGCTGACGAAGCCTTCTGGGTCCCAGCAGCTCTGCGAGCATAGAGAGCACTaGGGATTCTCAGCAGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WVVAVLGLTKPSGSQQLCEHREH*GFSAGL Trigger: GAGGCCTGCTGAGAATCCCAAGTGCTCTCTATGCTC...GCAGAGCTGCTGGGACCCAGAAGGCTTCGTCAGCCCTAGGACTGCCACTACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS TCA 90 bp | ACCATGTCTGGCTGCAGGCGACCCAGGTGCCATGTGATAGTCATCTaGAGACAGGCCTTCTGCACATCAGGTAGCGACCCCATCACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TMSGCRRPRCHVIVI*RQAFCTSGSDPITV Trigger: GACCGTGATGGGGTCGCTACCTGATGTGCAGAAGGCCTGTCTTCAGATGACTATCACATGGCACCTGGGTCGCCTGCAGCCAGACATGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CAA 90 bp | TCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTCCCCACGCCTGGTTTTGCAAAGACATCTAAGGCATaGTCTCCTGCCAGGCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SASRVLELKACVPTPGFAKTSKA*SPARRA Trigger: AGCCCGCCTGGCAGGAGACAATGCCTTAGATGTCTT...TGCAAAACCAGGCGTGGGGACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CAA 90 bp | AAATCTGCCTGTCTCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTCCCCACCACAAACGCACTAGGTaGAGGGATCCGGAGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KSACLCLQSAGTKGVCPHHKRTR*RDPEKS Trigger: GCTCTTCTCCGGATCCCTCAACCTAGTGCGTTTGTG...GTGGGGACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGAGACAGGCAGATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CAA 90 bp | AAATCTGCCTGTCTCTGCCTCCAGAGTGCTGGAACTAAAGGCGTGTGTCCCCACCTCAAAAGCATGGGGTaGGCGCCATTGAGGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: KSACLCLQSAGTKGVCPHLKSMG*APLRNW Trigger: CCAGTTCCTCAATGGCGCCAACCCCATGCTTTTGAG...GTGGGGACACACGCCTTTAGTTCCAGCACTCTGGAGGCAGAGACAGGCAGATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CAA 90 bp | AGTTGGGGGAGTGGTAGAGACAGGTGGATTCCAGGGACTTGCTGGCCAGCCAGTTTTCTCCAACTGAGCTaGAAGCTCCTCCATCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SWGSGRDRWIPGTCWPASFLQLS*KLLHPR Trigger: TCTGGGATGGAGGAGCTTCAAGCTCAGTTGGAGAAA...ACTGGCTGGCCAGCAAGTCCCTGGAATCCACCTGTCTCTACCACTCCCCCAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR CAA 90 bp | CAGATTGCTAGGAGGATTTTTGATGTTGTATCTACCTCCTTTGAGTTGGGGGAGCCGCGCTGGCCGCAGTaGCAGCTCCAGTTTCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QIARRIFDVVSTSFELGEPRWPQ*QLQFRL Trigger: GAGGCGAAACTGGAGCTGCAACTGCGGCCAGCGCGG...CTCCCCCAACTCAAAGGAGGTAGATACAACATCAAAAATCCTCCTAGCAATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS-3UTR CAA 90 bp | GGAGTCACAACTATATTGGCCAGGCCTGGGCAGTCAGATGGCAGCACCCAGCTGCCAGCAGTAGGTCTGTaGTCTTTCCTTCAGTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GVTTILARPGQSDGSTQLPAVGL*SFLQFL Trigger: AAGGAACTGAAGGAAAGACAACAGACCTACTGCTGG...CAGCTGGGTGCTGCCATCTGACTGCCCAGGCCTGGCCAATATAGTTGTGACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
||
| CDS CCA 90 bp | CTGGGTCCGGCTTCGCGTGTTAATTTCCATAGTGTAACGGATGTGTaGAACGAGGAGCTTGAAGATAGGGTGCAGTCCTGGGAGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LGPASRVNFHSVTDV*NEELEDRVQSWEAS Trigger: AGATGCCTCCCAGGACTGCACCCTATCTTCAAGCTCCTCGTTCCACACATCCGTTACACTATGGAAATTAACACGCGAAGCCGGACCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS CCA 90 bp | CTGAGCACAGCTTTGGTCCTTGGGTCTGAGAAATATTTTTCTGTGTaGTGTCCTAGAGGTACCATGTCTGGCTGCAGGCGACCCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSTALVLGSEKYFSV*CPRGTMSGCRRPRC Trigger: GCACCTGGGTCGCCTGCAGCCAGACATGGTACCTCTAGGACACCACACAGAAAAATATTTCTCAGACCCAAGGACCAAAGCTGTGCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS-3UTR CAA 90 bp | GAACTCAGAGATCTGCTGCATCTGCCTCCAGAGATTAAAGGTGCTGAGATTAAAATCGTCACGTCGTCCTaGCTGGTGGGCGGAGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: ELRDLLHLPPEIKGAEIKIVTSS*LVGGGI Trigger: GATGCCTCCGCCCACCAGCAAGGACGACGTGACGAT...TTTAATCTCAGCACCTTTAATCTCTGGAGGCAGATGCAGCAGATCTCTGAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
||
| CDS TCA 90 bp | AGTCTTCCAGATGGTTCCAGCTTCTCAGGAGGGTATAAACACGTTTaGGGCCCATTTCCAGAACCCCCGCCTTCAACGTCCATTCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLPDGSSFSGGYKHV*GPFPEPPPSTSIQS Trigger: ACTTTGAATGGACGTTGAAGGCGGGGGTTCTGGAAATGGGCCTCAAACGTGTTTATACCCTCCTGAGAAGCTGGAACCATCTGGAAGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000329.9 ENSMUST00000108574.3 |
||
| CDS CCA 90 bp | ACCCCCGCCTTCAACGTCCATTCAAAGTCCAGTCTCTTCTCCTCATaGAATCTCATATTTGGAGGAAGGTCATCCTTACAGTCCGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TPAFNVHSKSSLFSS*NLIFGGRSSLQSAA Trigger: AGCAGCGGACTGTAAGGATGACCTTCCTCCAAATATGAGATTCCATGAGGAGAAGAGACTGGACTTTGAATGGACGTTGAAGGCGGGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000329.9 ENSMUST00000108574.3 |
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| CDS-3UTR CAA 90 bp | GGCCTTGAACTCAGAGATCTGCTGCATCTGCCTCCAGAGATTAAAGGTGCTGAGATAAGGCAGGTCAAGTaGCTCATTCCGGGCTGTAAT | + |
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Preference number: 5 (lower is better) Translates to: GLELRDLLHLPPEIKGAEIRQVK*LIPGCN Trigger: ATTACAGCCCGGAATGAGCAACTTGACCTGCCTTAT...CTCAGCACCTTTAATCTCTGGAGGCAGATGCAGCAGATCTCTGAGTTCAAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| CDS-3UTR CAA 90 bp | GAAGCTTTCACCAATTGTGTGATCTCTGGCATATTCTCTACGTGTGACATGTCACACAAACGCACTAGGTaGAGGGATCCGGAGAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: EAFTNCVISGIFSTCDMSHKRTR*RDPEKS Trigger: GCTCTTCTCCGGATCCCTCAACCTAGTGCGTTTGTG...TGACATGTCACACGTAGAGAATATGCCAGAGATCACACAATTGGTGAAAGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| CDS-3UTR CAA 90 bp | TGTTTTATTTGCTTGCGAGTGTGTGTGTGTGGACATGGGTGTCAAGGTGCCCATCATGGAATCTCATATTaGGAGGAAGGTCATCCTTAC | + |
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Preference number: 5 (lower is better) Translates to: CFICLRVCVCGHGCQGAHHGISY*EEGHPY Trigger: GTAAGGATGACCTTCCTCCAAATATGAGATTCCATG...ATGGGCACCTTGACACCCATGTCCACACACACACACTCGCAAGCAAATAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| CDS-3UTR CAA 90 bp | CAGATTGCTAGGAGGATTTTTGATGTTGTATCTACCTCCTTTGAGTTGGGGGAGGTTCAGCAAATGGAATaGGAGCTCCTGCAGTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: QIARRIFDVVSTSFELGEVQQME*ELLQLE Trigger: TTCCAACTGCAGGAGCTCCAATTCCATTTGCTGAAC...CTCCCCCAACTCAAAGGAGGTAGATACAACATCAAAAATCCTCCTAGCAATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| CDS-3UTR CAA 90 bp | GACGTTAAAGGACTCAGCTCGATTAAAATAAATTCCAAGGTGTTGATACAGCTTCTCAAAAGCATGGGGTaGGCGCCATTGAGGAACTGG | + |
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Preference number: 5 (lower is better) Translates to: DVKGLSSIKINSKVLIQLLKSMG*APLRNW Trigger: CCAGTTCCTCAATGGCGCCAACCCCATGCTTTTGAG...AAGCTGTATCAACACCTTGGAATTTATTTTAATCGAGCTGAGTCCTTTAACGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108574.3 |
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| CDS-3UTR CAA 90 bp | GAACTCAGAGATCTGCTGCATCTGCCTCCAGAGATTAAAGGTGCTGAGATTAAACATGGAATCTCATATTaGGAGGAAGGTCATCCTTAC | + |
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Preference number: 5 (lower is better) Translates to: ELRDLLHLPPEIKGAEIKHGISY*EEGHPY Trigger: GTAAGGATGACCTTCCTCCAAATATGAGATTCCATG...TTTAATCTCAGCACCTTTAATCTCTGGAGGCAGATGCAGCAGATCTCTGAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| CDS-3UTR CAA 90 bp | ACACCTTTATTTAGAACTATTCAGGGTATGTGTTCAAAATGGAAACGTGGAGGGCCAGCAGTAGGTCTGTaGTCTTTCCTTCAGTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: TPLFRTIQGMCSKWKRGGPAVGL*SFLQFL Trigger: AAGGAACTGAAGGAAAGACAACAGACCTACTGCTGG...CCCTCCACGTTTCCATTTTGAACACATACCCTGAATAGTTCTAAATAAAGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| CDS-3UTR CAA 90 bp | ACACCTTTATTTAGAACTATTCAGGGTATGTGTTCAAAATGGAAACGTGGAGGGGTTCAGCAAATGGAATaGGAGCTCCTGCAGTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: TPLFRTIQGMCSKWKRGGVQQME*ELLQLE Trigger: TTCCAACTGCAGGAGCTCCAATTCCATTTGCTGAAC...CCCTCCACGTTTCCATTTTGAACACATACCCTGAATAGTTCTAAATAAAGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| CDS-3UTR CAA 90 bp | CATGTGAAGTTCATATCTCAGTGTCCATACCTAAAGTTTTATTGGAACATAGTCTTTCTCCAACTGAGCTaGAAGCTCCTCCATCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: HVKFISQCPYLKFYWNIVFLQLS*KLLHPR Trigger: TCTGGGATGGAGGAGCTTCAAGCTCAGTTGGAGAAA...GACTATGTTCCAATAAAACTTTAGGTATGGACACTGAGATATGAACTTCACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| CDS-3UTR CAA 90 bp | GAACTAGCTGAAGTAGTTGATTTTATCCAGAAATACAATTTTCCTCTCCTCCACATTGTCCAAATCTGCTaGAAATTGGCTGAGCACAGC | + |
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Preference number: 5 (lower is better) Translates to: ELAEVVDFIQKYNFPLLHIVQIC*KLAEHS Trigger: GCTGTGCTCAGCCAATTTCAAGCAGATTTGGACAAT...GTGGAGGAGAGGAAAATTGTATTTCTGGATAAAATCAACTACTTCAGCTAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| CDS GCA 72 bp | TCAAACTCCTCCTCCTTGCCCCGCGCTGGCCGCAGTTaGAGCTCCAGTTTCGCCTCCCGGTGCTCCCCAACC | + |
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Preference number: 6 (lower is better) Translates to: SNSSSLPRAGRS*SSSFASRCSPT Trigger: GGTTGGGGAGCACCGGGAGGCGAAACTGGAGCTGCAACTGCGGCCAGCGCGGGGCAAGGAGGAGGAGTTTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000329.9 ENSMUST00000108574.3 |
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| CDS CAA 72 bp | GTCAAACTCCTCCTCCTTGCCCCGCGCTGGCCGCAGTaGCAGCTCCAGTTTCGCCTCCCGGTGCTCCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: VKLLLLAPRWPQ*QLQFRLPVLPN Trigger: GTTGGGGAGCACCGGGAGGCGAAACTGGAGCTGCAACTGCGGCCAGCGCGGGGCAAGGAGGAGGAGTTTGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000329.9 ENSMUST00000108574.3 |
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| CDS GCA 72 bp | GCTGGCCGCAGTTGCAGCTCCAGTTTCGCCTCCCGGTaGTCCCCAACCAGCCACAAACGCACTAGGTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: AGRSCSSSFASR*SPTSHKRTRLR Trigger: CCTCAACCTAGTGCGTTTGTGGCTGGTTGGGGAGCACCGGGAGGCGAAACTGGAGCTGCAACTGCGGCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000329.9 ENSMUST00000108574.3 |
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| CDS CCA 72 bp | AACGTCGAAGTCAAACTCCTCCTCCTTGCCCCGCGCTaGCCGCAGTTGCAGCTCCAGTTTCGCCTCCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: NVEVKLLLLAPR*PQLQLQFRLPV Trigger: CACCGGGAGGCGAAACTGGAGCTGCAACTGCGGCCAGCGCGGGGCAAGGAGGAGGAGTTTGACTTCGACGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000329.9 ENSMUST00000108574.3 |
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| CDS CAA 90 bp | AACGTCGAAGTCAAACTCCTCCTCCTTGCCCCGCGCTGGCCGCAGTaGCAGCTCCAGTTTCGCCTCCCGGTGCTCCCCAACCAGCCACAA | + |
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Preference number: 6 (lower is better) Translates to: NVEVKLLLLAPRWPQ*QLQFRLPVLPNQPQ Trigger: TTGTGGCTGGTTGGGGAGCACCGGGAGGCGAAACTGGAGCTGCAACTGCGGCCAGCGCGGGGCAAGGAGGAGGAGTTTGACTTCGACGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000329.9 ENSMUST00000108574.3 |
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| CDS GCA 72 bp | GCGACCCCATCACGGTCTCCATCGTCACGTCGTCCTTaGTGGTGGGCGGAGGCATCCTCATTGTGCATGGAG | + |
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Preference number: 6 (lower is better) Translates to: ATPSRSPSSRRP*WWAEASSLCME Trigger: CTCCATGCACAATGAGGATGCCTCCGCCCACCAGCAAGGACGACGTGACGATGGAGACCGTGATGGGGTCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| CDS CAA 72 bp | AGCGACCCCATCACGGTCTCCATCGTCACGTCGTCCTaGCTGGTGGGCGGAGGCATCCTCATTGTGCATGGA | + |
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Preference number: 6 (lower is better) Translates to: SDPITVSIVTSS*LVGGGILIVHG Trigger: TCCATGCACAATGAGGATGCCTCCGCCCACCAGCAAGGACGACGTGACGATGGAGACCGTGATGGGGTCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| CDS TCA 72 bp | GGCTGCAGGCGACCCAGGTGCCATGTGATAGTCATCTaGAGACAGGCCTTCTGCACATCAGGTAGCGACCCC | + |
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Preference number: 6 (lower is better) Translates to: GCRRPRCHVIVI*RQAFCTSGSDP Trigger: GGGGTCGCTACCTGATGTGCAGAAGGCCTGTCTTCAGATGACTATCACATGGCACCTGGGTCGCCTGCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| CDS CCA 72 bp | ACCCCATCACGGTCTCCATCGTCACGTCGTCCTTGCTaGTGGGCGGAGGCATCCTCATTGTGCATGGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: TPSRSPSSRRPC*WAEASSLCMEH Trigger: ATGCTCCATGCACAATGAGGATGCCTCCGCCCACCAGCAAGGACGACGTGACGATGGAGACCGTGATGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| CDS CAA 90 bp | ACATCAGGTAGCGACCCCATCACGGTCTCCATCGTCACGTCGTCCTaGCTGGTGGGCGGAGGCATCCTCATTGTGCATGGAGCATTAGGT | + |
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Preference number: 6 (lower is better) Translates to: TSGSDPITVSIVTSS*LVGGGILIVHGALG Trigger: ACCTAATGCTCCATGCACAATGAGGATGCCTCCGCCCACCAGCAAGGACGACGTGACGATGGAGACCGTGATGGGGTCGCTACCTGATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| CDS TCA 72 bp | GATGGTTCCAGCTTCTCAGGAGGGTATAAACACGTTTaGGGCCCATTTCCAGAACCCCCGCCTTCAACGTCC | + |
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Preference number: 6 (lower is better) Translates to: DGSSFSGGYKHV*GPFPEPPPSTS Trigger: GGACGTTGAAGGCGGGGGTTCTGGAAATGGGCCTCAAACGTGTTTATACCCTCCTGAGAAGCTGGAACCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000329.9 ENSMUST00000108574.3 |
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| CDS CCA 72 bp | CCGCTGCTATTGTCTGAGGTAAGCCTTCTTTCCAGGTaGCCCAGCAGTAGGTCTGTTGTCTTTCCTTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: PLLLSEVSLLSR*PSSRSVVFPSV Trigger: AACTGAAGGAAAGACAACAGACCTACTGCTGGGCCACCTGGAAAGAAGGCTTACCTCAGACAATAGCAGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000329.9 ENSMUST00000108574.3 |
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| CDS CCA 72 bp | GCTTCGCGTGTTAATTTCCATAGTGTAACGGATGTGTaGAACGAGGAGCTTGAAGATAGGGTGCAGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ASRVNFHSVTDV*NEELEDRVQSW Trigger: CCAGGACTGCACCCTATCTTCAAGCTCCTCGTTCCACACATCCGTTACACTATGGAAATTAACACGCGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| CDS TCA 72 bp | ACCTGTGCTCACTACCTGATCAAATATTCCTCCATCTaGGATGAGCTGGGTCCGGCTTCGCGTGTTAATTTC | + |
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Preference number: 6 (lower is better) Translates to: TCAHYLIKYSSI*DELGPASRVNF Trigger: GAAATTAACACGCGAAGCCGGACCCAGCTCATCTCAGATGGAGGAATATTTGATCAGGTAGTGAGCACAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| CDS CAA 72 bp | GCGGCTGGGCTTGAGGTATTCATAAGGCAGGTCAAGTaGCTCATTCCGGGCTGTAATCTCTTTCTCCAAATT | + |
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Preference number: 6 (lower is better) Translates to: AAGLEVFIRQVK*LIPGCNLFLQI Trigger: AATTTGGAGAAAGAGATTACAGCCCGGAATGAGCAACTTGACCTGCCTTATGAATACCTCAAGCCCAGCCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| CDS CAA 90 bp | GTTCTCTATGCGGCTGGGCTTGAGGTATTCATAAGGCAGGTCAAGTaGCTCATTCCGGGCTGTAATCTCTTTCTCCAAATTGTCCAAATC | + |
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Preference number: 6 (lower is better) Translates to: VLYAAGLEVFIRQVK*LIPGCNLFLQIVQI Trigger: GATTTGGACAATTTGGAGAAAGAGATTACAGCCCGGAATGAGCAACTTGACCTGCCTTATGAATACCTCAAGCCCAGCCGCATAGAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000329.9 |
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| CDS CAA 90 bp | ACGTCCATTCAAAGTCCAGTCTCTTCTCCTCATGGAATCTCATATTaGGAGGAAGGTCATCCTTACAGTCCGCTGCTATTGTCTGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: TSIQSPVSSPHGISY*EEGHPYSPLLLSEV Trigger: TACCTCAGACAATAGCAGCGGACTGTAAGGATGACCTTCCTCCAAATATGAGATTCCATGAGGAGAAGAGACTGGACTTTGAATGGACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000329.9 ENSMUST00000108574.3 |
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| CDS CAA 72 bp | CAAAGTCCAGTCTCTTCTCCTCATGGAATCTCATATTaGGAGGAAGGTCATCCTTACAGTCCGCTGCTATTG | + |
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Preference number: 6 (lower is better) Translates to: QSPVSSPHGISY*EEGHPYSPLLL Trigger: CAATAGCAGCGGACTGTAAGGATGACCTTCCTCCAAATATGAGATTCCATGAGGAGAAGAGACTGGACTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000329.9 ENSMUST00000108574.3 |
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| CDS CCA 72 bp | TTCAACGTCCATTCAAAGTCCAGTCTCTTCTCCTCATaGAATCTCATATTTGGAGGAAGGTCATCCTTACAG | + |
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Preference number: 6 (lower is better) Translates to: FNVHSKSSLFSS*NLIFGGRSSLQ Trigger: CTGTAAGGATGACCTTCCTCCAAATATGAGATTCCATGAGGAGAAGAGACTGGACTTTGAATGGACGTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000329.9 ENSMUST00000108574.3 |
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