Pregenerated sensors for ALMS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063810Ensembl transcript IDs: ENSMUST00000072018.6, ENSMUST00000213058.2
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGCCATACACGGCAAGTCAGTGGGACAACCTCAGTCTTGCCCAGATaGTCCACTGGGGTGTACCGGAGCCGCGGGGACAGAGGCGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: CHTRQVSGTTSVLPR*STGVYRSRGDRGGG Trigger: GCCTCCGCCTCTGTCCCCGCGGCTCCGGTACACCCCAGTGGAGCATCTGGGCAAGACTGAGGTTGTCCCACTGACTTGCCGTGTATGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 90 bp | GTTCTTCTGGACAGCCAGGAGGACTCTCCTGGGCAGGGGCCTCGCTaGGTGGAACAGAGCCTCCCGCTCACTCTGGAACAGGCTCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: VLLDSQEDSPGQGPR*VEQSLPLTLEQALE Trigger: CTCCAGAGCCTGTTCCAGAGTGAGCGGGAGGCTCTGTTCCACTCAGCGAGGCCCCTGCCCAGGAGAGTCCTCCTGGCTGTCCAGAAGAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | TGCTCTCACAAATGGCCGAAGAGAAACCTGGCCACTATCCCTGCCTaGGCCTCCCAGGGACCCACGACTGTTCATGCATTGGGCCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: CSHKWPKRNLATIPA*ASQGPTTVHALGLP Trigger: TGGCAGGCCCAATGCATGAACAGTCGTGGGTCCCTGGGAGGCCCAGGCAGGGATAGTGGCCAGGTTTCTCTTCGGCCATTTGTGAGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 90 bp | GAGTTGCTCTCACAAATGGCCGAAGAGAAACCTGGCCACTATCCCTaGCTGGGCCTCCCAGGGACCCACGACTGTTCATGCATTGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: ELLSQMAEEKPGHYP*LGLPGTHDCSCIGP Trigger: AGGCCCAATGCATGAACAGTCGTGGGTCCCTGGGAGGCCCAGGCAGGGATAGTGGCCAGGTTTCTCTTCGGCCATTTGTGAGAGCAACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 90 bp | TACTCTGGCCCCTCTCTAGGCTCTTACTCCACTTCCTGTGTTGCTTaGCTTTCTGTTTTTGTTGCCTCCTCCCAGTCCACTCCCTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: YSGPSLGSYSTSCVA*LSVFVASSQSTPWL Trigger: GAGCCAGGGAGTGGACTGGGAGGAGGCAACAAAAACAGAAAGGCAAGCAACACAGGAAGTGGAGTAAGAGCCTAGAGAGGGGCCAGAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 90 bp | TCCTGTGCACTTTCTGAGGCCCGGAGTGAATGTGTGATGGGATTCTaGAGCAGTTTAGCCAAGCGATCAAGTCGTTCCACCAAGGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: SCALSEARSECVMGF*SSLAKRSSRSTKES Trigger: GCTCTCCTTGGTGGAACGACTTGATCGCTTGGCTAAACTGCTTCAGAATCCCATCACACATTCACTCCGGGCCTCAGAAAGTGCACAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | CTTGGCCAAAAGCCTGGATCAACCGGACTGTGTCAATGGTGGATATaGAGCTGCTCCTCTCATTTAAAGGCATGTCCCTATCAGTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: LGQKPGSTGLCQWWI*SCSSHLKACPYQLG Trigger: CCCCAACTGATAGGGACATGCCTTTAAATGAGAGGAGCAGCTCCATATCCACCATTGACACAGTCCGGTTGATCCAGGCTTTTGGCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | TTAATTCGCCTGGGCGACAAAGACAGTCTATCTTGGCCAAAAGCCTaGATCAACCGGACTGTGTCAATGGTGGATATGGAGCTGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: LIRLGDKDSLSWPKA*INRTVSMVDMELLL Trigger: GAGGAGCAGCTCCATATCCACCATTGACACAGTCCGGTTGATCCAGGCTTTTGGCCAAGATAGACTGTCTTTGTCGCCCAGGCGAATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | GAAAGTGCTTTTCTATTTGAAGGTGGAGTAGATGCAGCTGTACAGTaGTCAGGGGCTGACTGGGAGATCGCATCACTGACCTTGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: ESAFLFEGGVDAAVQ*SGADWEIASLTLAS Trigger: TGAAGCCAAGGTCAGTGATGCGATCTCCCAGTCAGCCCCTGACCACTGTACAGCTGCATCTACTCCACCTTCAAATAGAAAAGCACTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | AAGTCGTTCCACCAAGGAGAGCTCTTTCGTATCACAAGCACCAGATaGATTCTGCTGCTTCTGTCGCTCCTGGTATCTGTTCCAGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: KSFHQGELFRITSTR*ILLLLSLLVSVPEF Trigger: GAACTCTGGAACAGATACCAGGAGCGACAGAAGCAGCAGAATCCATCTGGTGCTTGTGATACGAAAGAGCTCTCCTTGGTGGAACGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | CATTTGGGGACAGGCTGTGTTCAATGCCTTCCTGTTGTGCTTGCATaGCTGCTCCAGATATCTCCTCCGTTGACTAGTGACAGTACTGTA | + |
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Preference number: 5 (lower is better) Translates to: HLGTGCVQCLPVVLA*LLQISPPLTSDSTV Trigger: TACAGTACTGTCACTAGTCAACGGAGGAGATATCTGGAGCAGCCATGCAAGCACAACAGGAAGGCATTGAACACAGCCTGTCCCCAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 90 bp | GTGTATGCGTTGTTAGCAGAGTGTCGGGAGATACCCTCAACATTCTaGGATTGGAGGAATGGTATTCCGGCTCACTGGTTGGTTCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: VYALLAECREIPSTF*DWRNGIPAHWLVLE Trigger: CTCAAGAACCAACCAGTGAGCCGGAATACCATTCCTCCAATCTCAGAATGTTGAGGGTATCTCCCGACACTCTGCTAACAACGCATACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 90 bp | CAACTTGTCCGAACTTGGGCCAGGGGGAGGAAGGCAGCTGTGTCCTaGATGATGGTGAAAGAAATCCTTCCAAGAATGTTGCATGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: QLVRTWARGRKAAVS*MMVKEILPRMLHEN Trigger: GTTTTCATGCAACATTCTTGGAAGGATTTCTTTCACCATCATTCAGGACACAGCTGCCTTCCTCCCCCTGGCCCAAGTTCGGACAAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 90 bp | ACTGCTGCTCCAATCTTCTGGTCAGCAGATCCTGCTGAATGTGTATaGGTTGTTAGCAGAGTGTCGGGAGATACCCTCAACATTCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: TAAPIFWSADPAECV*VVSRVSGDTLNILR Trigger: TCTCAGAATGTTGAGGGTATCTCCCGACACTCTGCTAACAACGCATACACATTCAGCAGGATCTGCTGACCAGAAGATTGGAGCAGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | TTCGTATCACAAGCACCAGATGGATTCTGCTGCTTCTGTCGCTCCTaGTATCTGTTCCAGAGTTCATTCAAACTCACGGGGCACTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: FVSQAPDGFCCFCRS*YLFQSSFKLTGHSV Trigger: AACTGAGTGCCCCGTGAGTTTGAATGAACTCTGGAACAGATACCAGGAGCGACAGAAGCAGCAGAATCCATCTGGTGCTTGTGATACGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | GTCTATCTTGGCCAAAAGCCTGGATCAACCGGACTGTGTCAATGGTaGATATGGAGCTGCTCCTCTCATTTAAAGGCATGTCCCTATCAG | + |
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Preference number: 5 (lower is better) Translates to: VYLGQKPGSTGLCQW*IWSCSSHLKACPYQ Trigger: CTGATAGGGACATGCCTTTAAATGAGAGGAGCAGCTCCATATCCACCATTGACACAGTCCGGTTGATCCAGGCTTTTGGCCAAGATAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 90 bp | ACCAAGGAGAGCTCTTTCGTATCACAAGCACCAGATGGATTCTGCTaGTTCTGTCGCTCCTGGTATCTGTTCCAGAGTTCATTCAAACTC | + |
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Preference number: 5 (lower is better) Translates to: TKESSFVSQAPDGFC*FCRSWYLFQSSFKL Trigger: GAGTTTGAATGAACTCTGGAACAGATACCAGGAGCGACAGAAGCAGCAGAATCCATCTGGTGCTTGTGATACGAAAGAGCTCTCCTTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 90 bp | TCCACCAAGGAGAGCTCTTTCGTATCACAAGCACCAGATGGATTCTaGTGCTTCTGTCGCTCCTGGTATCTGTTCCAGAGTTCATTCAAA | + |
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Preference number: 5 (lower is better) Translates to: STKESSFVSQAPDGF*CFCRSWYLFQSSFK Trigger: TTTGAATGAACTCTGGAACAGATACCAGGAGCGACAGAAGCAGCAGAATCCATCTGGTGCTTGTGATACGAAAGAGCTCTCCTTGGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | TTTGAAGGTGGAGTAGATGCAGCTGTACAGTGGTCAGGGGCTGACTaGGAGATCGCATCACTGACCTTGGCTTCAACATTTACCATATTA | + |
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Preference number: 5 (lower is better) Translates to: FEGGVDAAVQWSGAD*EIASLTLASTFTIL Trigger: TAATATGGTAAATGTTGAAGCCAAGGTCAGTGATGCGATCTCCCAGTCAGCCCCTGACCACTGTACAGCTGCATCTACTCCACCTTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | ACAGTCTATCTTGGCCAAAAGCCTGGATCAACCGGACTGTGTCAATaGTGGATATGGAGCTGCTCCTCTCATTTAAAGGCATGTCCCTAT | + |
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Preference number: 5 (lower is better) Translates to: TVYLGQKPGSTGLCQ*WIWSCSSHLKACPY Trigger: ATAGGGACATGCCTTTAAATGAGAGGAGCAGCTCCATATCCACCATTGACACAGTCCGGTTGATCCAGGCTTTTGGCCAAGATAGACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 90 bp | ATCTGGCAACTCTTCTTGGTGAAAACTCCCAGGCTTTATTTCCTGTaGGTAAGCAGAAGAGACTACTGCTGCTCCAATCTTCTGGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: IWQLFLVKTPRLYFL*VSRRDYCCSNLLVS Trigger: GCTGACCAGAAGATTGGAGCAGCAGTAGTCTCTTCTGCTTACTCACAGGAAATAAAGCCTGGGAGTTTTCACCAAGAAGAGTTGCCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 90 bp | GAGGTGGAAACTTGGTCTTTATCAGCCAAGTTGCCTTCTGGCTGCTaGGTGTCCTTTTCTGATGGCCATGACATATATGAACACAGGACA | + |
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Preference number: 5 (lower is better) Translates to: EVETWSLSAKLPSGC*VSFSDGHDIYEHRT Trigger: TGTCCTGTGTTCATATATGTCATGGCCATCAGAAAAGGACACTCAGCAGCCAGAAGGCAACTTGGCTGATAAAGACCAAGTTTCCACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
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| CDS GCA 90 bp | TTGAAACAGGGATTGCTCTGTTCTATTGATCTGGAAAGGTTGATGTaGCTGCCTCTCCATGATGATGGGCTCCGATGTCCTCTAATCAAG | + |
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Preference number: 5 (lower is better) Translates to: LKQGLLCSIDLERLM*LPLHDDGLRCPLIK Trigger: CTTGATTAGAGGACATCGGAGCCCATCATCATGGAGAGGCAGGCACATCAACCTTTCCAGATCAATAGAACAGAGCAATCCCTGTTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | TGTCCTCTAATCAAGTCTGAAGGTTCAACAGATCGAAAAGCACAATaGCAGCTGTCTGGCCGTGGTTGTTCAGCAGTAAGAGTCCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: CPLIKSEGSTDRKAQ*QLSGRGCSAVRVLK Trigger: TTTCAGGACTCTTACTGCTGAACAACCACGGCCAGACAGCTGCCATTGTGCTTTTCGATCTGTTGAACCTTCAGACTTGATTAGAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | TTCAGAAAGAAGAGAGTTCTGTTTTCTCGTGTGGCCAACTACGTCTaGAGGTTTGCATTGTTGCTGATCAGGAAAATCGGGAGAAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: FRKKRVLFSRVANYV*RFALLLIRKIGRRV Trigger: GACCCTTCTCCCGATTTTCCTGATCAGCAACAATGCAAACCTCCAGACGTAGTTGGCCACACGAGAAAACAGAACTCTCTTCTTTCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 90 bp | CCAACCTTACAACCAGAGGAATCAGAAATGCACTCAGAGTGTTCGTaGGAAGAAAAAGTGATGGCAGTAGTGAACTGCTTCTTGGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: PTLQPEESEMHSECS*EEKVMAVVNCFLGS Trigger: TGAGCCCAAGAAGCAGTTCACTACTGCCATCACTTTTTCTTCTCACGAACACTCTGAGTGCATTTCTGATTCCTCTGGTTGTAAGGTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 90 bp | ATGTTTACAGTGTTGGAGAGGTCATCGTCTCTTGTGCCTAGCATTTaGGGTGGAAAGTCTGGGGCAATAGCATCATTTGAGCCTGAATGT | + |
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Preference number: 5 (lower is better) Translates to: MFTVLERSSSLVPSI*GGKSGAIASFEPEC Trigger: ACATTCAGGCTCAAATGATGCTATTGCCCCAGACTTTCCACCTCAAATGCTAGGCACAAGAGACGATGACCTCTCCAACACTGTAAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | ACGCTGTTAGAATGTCAGCCTTCTTGTGAGCAGATCCAGAATCAGTaGAAACTTTCACAACATCTTCGGGCAGGTTCTTTCCTCTATGAG | + |
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Preference number: 5 (lower is better) Translates to: TLLECQPSCEQIQNQ*KLSQHLRAGSFLYE Trigger: CTCATAGAGGAAAGAACCTGCCCGAAGATGTTGTGAAAGTTTCCACTGATTCTGGATCTGCTCACAAGAAGGCTGACATTCTAACAGCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | ATTTCTTTAGCTGGCACACAAGTAGGTTCTACTAATTCTGATGGCTaGGGATCCATGTATGCATGGACTGGCATTCCAACACCCTTGCTA | + |
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Preference number: 5 (lower is better) Translates to: ISLAGTQVGSTNSDG*GSMYAWTGIPTPLL Trigger: TAGCAAGGGTGTTGGAATGCCAGTCCATGCATACATGGATCCCCAGCCATCAGAATTAGTAGAACCTACTTGTGTGCCAGCTAAAGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | GTACTGTATAATTTAATTCGCCTGGGCGACAAAGACAGTCTATCTTaGCCAAAAGCCTGGATCAACCGGACTGTGTCAATGGTGGATATG | + |
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Preference number: 5 (lower is better) Translates to: VLYNLIRLGDKDSLS*PKAWINRTVSMVDM Trigger: CATATCCACCATTGACACAGTCCGGTTGATCCAGGCTTTTGGCCAAGATAGACTGTCTTTGTCGCCCAGGCGAATTAAATTATACAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 90 bp | CAGCCTTCAGGTTCAGACCTCATTACAGACCTGGCAGCTTTATATTaGCTAAAAGTTTCATCATATGCCATTCTAGCTGTGCCTTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: QPSGSDLITDLAALY*LKVSSYAILAVPSA Trigger: AGCAGAAGGCACAGCTAGAATGGCATATGATGAAACTTTTAGGCAATATAAAGCTGCCAGGTCTGTAATGAGGTCTGAACCTGAAGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | CAAGTAGGTTCTACTAATTCTGATGGCTGGGGATCCATGTATGCATaGACTGGCATTCCAACACCCTTGCTAATTTTGATGTCATCAGGT | + |
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Preference number: 5 (lower is better) Translates to: QVGSTNSDGWGSMYA*TGIPTPLLILMSSG Trigger: ACCTGATGACATCAAAATTAGCAAGGGTGTTGGAATGCCAGTCCATGCATACATGGATCCCCAGCCATCAGAATTAGTAGAACCTACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | TCTGTTCTTGTGAACCATCCGCAGATACTGGAGTCCCCTCTGGTTTaGAATATCCTTCCAAATGTGAAATGTTCACTTGTGTTTGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SVLVNHPQILESPLV*NILPNVKCSLVFAL Trigger: CAAGGCAAACACAAGTGAACATTTCACATTTGGAAGGATATTCCAAACCAGAGGGGACTCCAGTATCTGCGGATGGTTCACAAGAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 90 bp | AGAACAACCTACCTCTCTCTGCAATACAGCAATTCTTTCACTCTGTaGACCAAGGTTTTCATAAAGGCTGGAGTACTTAGCATCACCACA | + |
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Preference number: 5 (lower is better) Translates to: RTTYLSLQYSNSFTL*TKVFIKAGVLSITT Trigger: TGTGGTGATGCTAAGTACTCCAGCCTTTATGAAAACCTTGGTGCACAGAGTGAAAGAATTGCTGTATTGCAGAGAGAGGTAGGTTGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | CTAAAGCAACTGTTAGCTAAGTCTGAAGATGTTTCTGAGGTGGCTTaGATTAAAGCTTCACTAACTTCTGATGGTCGAGCAAGCCATTCA | + |
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Preference number: 5 (lower is better) Translates to: LKQLLAKSEDVSEVA*IKASLTSDGRASHS Trigger: TGAATGGCTTGCTCGACCATCAGAAGTTAGTGAAGCTTTAATCCAAGCCACCTCAGAAACATCTTCAGACTTAGCTAACAGTTGCTTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 90 bp | TCAGTGGAAACTTTCACAACATCTTCGGGCAGGTTCTTTCCTCTATaGGAATATGAAAGAGAGAATTCTGATGGTAAAGGAGTCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: SVETFTTSSGRFFPL*EYERENSDGKGVFW Trigger: CCAGAAGACTCCTTTACCATCAGAATTCTCTCTTTCATATTCTCATAGAGGAAAGAACCTGCCCGAAGATGTTGTGAAAGTTTCCACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 90 bp | TGTGTCCTGAATGATGGTGAAAGAAATCCTTCCAAGAATGTTGCATaGAAACACTCCTTCCCAAAGATTCATGGCAGAAGTCTTGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: CVLNDGERNPSKNVA*KHSFPKIHGRSLAH Trigger: ATGAGCAAGACTTCTGCCATGAATCTTTGGGAAGGAGTGTTTTCATGCAACATTCTTGGAAGGATTTCTTTCACCATCATTCAGGACACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 90 bp | CCTCTTGAAAATAGAGTTGTTCTGATGTCTCATCCAAGTTGGATTTaGCTGTCGGAAGAGGACAATCAGAGATATCAAGTCCTCTGTAGA | + |
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Preference number: 5 (lower is better) Translates to: PLENRVVLMSHPSWI*LSEEDNQRYQVLCR Trigger: TCTACAGAGGACTTGATATCTCTGATTGTCCTCTTCCGACAGTCAAATCCAACTTGGATGAGACATCAGAACAACTCTATTTTCAAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
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| CDS GCA 90 bp | CTTTGCCTACTACCATCAGCTAAAATAGTCACCGGTGTAGAACCATaGCTTTCAAGTGATGACTGGAAAGAGGTTTTCTGTTTAAGATCT | + |
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Preference number: 5 (lower is better) Translates to: LCLLPSAKIVTGVEP*LSSDDWKEVFCLRS Trigger: AGATCTTAAACAGAAAACCTCTTTCCAGTCATCACTTGAAAGGCATGGTTCTACACCGGTGACTATTTTAGCTGATGGTAGTAGGCAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | GGCACTTTATTAGGAAGAGGAGTAATTTTACATGGGAAAGAAGCATaGTCCTTACTGGCTAGACATGCTTCAGTTTGTTGTAAGGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: GTLLGRGVILHGKEA*SLLARHASVCCKAF Trigger: GAAAGCCTTACAACAAACTGAAGCATGTCTAGCCAGTAAGGACCATGCTTCTTTCCCATGTAAAATTACTCCTCTTCCTAATAAAGTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
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| CDS TCA 90 bp | TCTTTGTGTAAGCAGAAACCAGATGAGACTGCAGGTTTCTTTTTCTaGTCAGATAGTCCTGGAACAGTTGAAGCCTTCAAAGAACTTTCA | + |
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Preference number: 5 (lower is better) Translates to: SLCKQKPDETAGFFF*SDSPGTVEAFKELS Trigger: TGAAAGTTCTTTGAAGGCTTCAACTGTTCCAGGACTATCTGATCAGAAAAAGAAACCTGCAGTCTCATCTGGTTTCTGCTTACACAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 90 bp | GACTTAAGCTCTAGAGTGACAGAAACCGGCTTATTGAGCATGTTCTaGGGAGCATTAATGGAGGATTTTAAATCTGGATACAGATATAGG | + |
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Preference number: 5 (lower is better) Translates to: DLSSRVTETGLLSMF*GALMEDFKSGYRYR Trigger: CCTATATCTGTATCCAGATTTAAAATCCTCCATTAATGCTCCTCAGAACATGCTCAATAAGCCGGTTTCTGTCACTCTAGAGCTTAAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
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| CDS CCA 90 bp | CATGTTTCTTCAGTTAGTAGACTGTCTGATAATGTGGAAAGCTGGTaGAAAGCTTTATTACCAGCTGATCCACAAACAGCTGAAACACTT | + |
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Preference number: 5 (lower is better) Translates to: HVSSVSRLSDNVESW*KALLPADPQTAETL Trigger: AAGTGTTTCAGCTGTTTGTGGATCAGCTGGTAATAAAGCTTTCCACCAGCTTTCCACATTATCAGACAGTCTACTAACTGAAGAAACATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | TGTACATATTCAATGTGTGGAACTTCTTCTACAAATGATTCCCTCTaGGTACAAACATCAGTTGTGGAGGATTCTTTGAAGCAAACCACC | + |
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Preference number: 5 (lower is better) Translates to: CTYSMCGTSSTNDSL*VQTSVVEDSLKQTT Trigger: GGTGGTTTGCTTCAAAGAATCCTCCACAACTGATGTTTGTACCCAGAGGGAATCATTTGTAGAAGAAGTTCCACACATTGAATATGTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | GATCCAATGAATGAAACCTTTCACCTAAGGTTCCACTATCCAACTTaGAAGAAGTCTTGGGACAAAGAGTTATACGAACACATGAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: DPMNETFHLRFHYPT*KKSWDKELYEHMKV Trigger: CACTTTCATGTGTTCGTATAACTCTTTGTCCCAAGACTTCTTCCAAGTTGGATAGTGGAACCTTAGGTGAAAGGTTTCATTCATTGGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 90 bp | CTCATCTCATCTTCTGCTGGAGTCCTTAAACAAACATTCTCAAGATaGTTATCAGCGATCAAAGGAGCCTCTTTTCCTCTTTTTAACATG | + |
|
Preference number: 5 (lower is better) Translates to: LISSSAGVLKQTFSR*LSAIKGASFPLFNM Trigger: CATGTTAAAAAGAGGAAAAGAGGCTCCTTTGATCGCTGATAATCATCTTGAGAATGTTTGTTTAAGGACTCCAGCAGAAGATGAGATGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
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| CDS TCA 90 bp | GCAACAGTCCCAATATACTTTATCTCTGGATATCTGGTATGCACCTaGGAAGATGCCCAAGTATTTCTAGTCTCCTTTTGCTTAAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ATVPIYFISGYLVCT*EDAQVFLVSFCLKN Trigger: ATTCTTTAAGCAAAAGGAGACTAGAAATACTTGGGCATCTTCTCAGGTGCATACCAGATATCCAGAGATAAAGTATATTGGGACTGTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
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| CDS TCA 90 bp | CGTTTGAGTCTCACTTATAAGACTCTCTTGATTGGAAGACTCAATTaGGGCAATAATTGCCTCAAAGGCTACATTTTCAGTAGCATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RLSLTYKTLLIGRLN*GNNCLKGYIFSSIN Trigger: GTTGATGCTACTGAAAATGTAGCCTTTGAGGCAATTATTGCCTCAATTGAGTCTTCCAATCAAGAGAGTCTTATAAGTGAGACTCAAACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
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| CDS CCA 90 bp | TCTCTGACAACCACTCCTCTTCTCGGCTATCTGTTATACTTGTCTTaGGTGAAGTATATGGAAAGAAGTTTAGAAAAACATCAGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: SLTTTPLLGYLLYLS*VKYMERSLEKHQKQ Trigger: CTGTTTCTGATGTTTTTCTAAACTTCTTTCCATATACTTCACCCAAGACAAGTATAACAGATAGCCGAGAAGAGGAGTGGTTGTCAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | GAAACCTTTCACCTAAGGTTCCACTATCCAACTTGGAAGAAGTCTTaGGACAAAGAGTTATACGAACACATGAAAGTGCTTTTCTATTTG | + |
|
Preference number: 5 (lower is better) Translates to: ETFHLRFHYPTWKKS*DKELYEHMKVLFYL Trigger: CAAATAGAAAAGCACTTTCATGTGTTCGTATAACTCTTTGTCCCAAGACTTCTTCCAAGTTGGATAGTGGAACCTTAGGTGAAAGGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 90 bp | TTATCAGGAATTCCTCTCAAAGGTGCAAATTCTAGTTCACTTTGTTaGAACAAGGAATCAGGCTCAACCTCTTCTTGGTCTTGTATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LSGIPLKGANSSSLC*NKESGSTSSWSCIK Trigger: TTTGATACAAGACCAAGAAGAGGTTGAGCCTGATTCCTTGTTTCAACAAAGTGAACTAGAATTTGCACCTTTGAGAGGAATTCCTGATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 90 bp | TTGCATCGTTTCAGTGCCATATTTTCTGCTTCCATCAAGAGAGTCTaGATTTCCTTAAGAGTTTTCGAACCACGATCTATATTCTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: LHRFSAIFSASIKRV*ISLRVFEPRSIFCI Trigger: AATGCAGAATATAGATCGTGGTTCGAAAACTCTTAAGGAAATTCAGACTCTCTTGATGGAAGCAGAAAATATGGCACTGAAACGATGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | ATGAGACTCCTGCACAGGGATTTGGCTTGTTCTTCCTTAAGTTTTTaGTCTGCAGATAATTGGAAAGAAACTTTTTCTCTTTGGCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: MRLLHRDLACSSLSF*SADNWKETFSLWLF Trigger: AAAAAGCCAAAGAGAAAAAGTTTCTTTCCAATTATCTGCAGACCAAAAACTTAAGGAAGAACAAGCCAAATCCCTGTGCAGGAGTCTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 90 bp | AACAATGATTTTGAATCTGCTGGTTCAAACACCCCAGGAGTAGACTaGTATTTCAGGTACTTAAGCTTATCGATGAAAGAGATTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: NNDFESAGSNTPGVD*YFRYLSLSMKEISF Trigger: GAATGAAATCTCTTTCATCGATAAGCTTAAGTACCTGAAATACCAGTCTACTCCTGGGGTGTTTGAACCAGCAGATTCAAAATCATTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
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| CDS TCA 90 bp | TTAAACTCACTATTAATCCTTGTTTTAGAAGCAGGATCCAATGAATaGAACCTTTCACCTAAGGTTCCACTATCCAACTTGGAAGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LNSLLILVLEAGSNE*NLSPKVPLSNLEEV Trigger: GACTTCTTCCAAGTTGGATAGTGGAACCTTAGGTGAAAGGTTTCATTCATTGGATCCTGCTTCTAAAACAAGGATTAATAGTGAGTTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 90 bp | ATTTCAGATGAAAATGTGGTCTTTTCTGGACTTTCTGTTGTTATCTaGGTGATGGCATCAGATGATAACTTTCCAAAGGACGTAGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ISDENVVFSGLSVVI*VMASDDNFPKDVVK Trigger: CTTTACTACGTCCTTTGGAAAGTTATCATCTGATGCCATCACTCAGATAACAACAGAAAGTCCAGAAAAGACCACATTTTCATCTGAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 72 bp | GAGGCGGAGGCGTGGGAGGGGGCAGAGAGAAAGCACTaGCAGGACGGTCGGGGTGAGCCTGCAGCCAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: EAEAWEGAERKH*QDGRGEPAARL Trigger: AAGCCTGGCTGCAGGCTCACCCCGACCGTCCTGGCAGTGCTTTCTCTCTGCCCCCTCCCACGCCTCCGCCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | GCCAGGAGGACTCTCCTGGGCAGGGGCCTCGCTGAGTaGAACAGAGCCTCCCGCTCACTCTGGAACAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ARRTLLGRGLAE*NRASRSLWNRL Trigger: GAGCCTGTTCCAGAGTGAGCGGGAGGCTCTGTTCCACTCAGCGAGGCCCCTGCCCAGGAGAGTCCTCCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | GACAGCCAGGAGGACTCTCCTGGGCAGGGGCCTCGCTaGGTGGAACAGAGCCTCCCGCTCACTCTGGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: DSQEDSPGQGPR*VEQSLPLTLEQ Trigger: CTGTTCCAGAGTGAGCGGGAGGCTCTGTTCCACTCAGCGAGGCCCCTGCCCAGGAGAGTCCTCCTGGCTGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 72 bp | CGGCAAGTCAGTGGGACAACCTCAGTCTTGCCCAGATaGTCCACTGGGGTGTACCGGAGCCGCGGGGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: RQVSGTTSVLPR*STGVYRSRGDR Trigger: TCTGTCCCCGCGGCTCCGGTACACCCCAGTGGAGCATCTGGGCAAGACTGAGGTTGTCCCACTGACTTGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 90 bp | GATGACTGCTGCCATACACGGCAAGTCAGTGGGACAACCTCAGTCTaGCCCAGATGCTCCACTGGGGTGTACCGGAGCCGCGGGGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: DDCCHTRQVSGTTSV*PRCSTGVYRSRGDR Trigger: TCTGTCCCCGCGGCTCCGGTACACCCCAGTGGAGCATCTGGGCAAGACTGAGGTTGTCCCACTGACTTGCCGTGTATGGCAGCAGTCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | TGCCATACACGGCAAGTCAGTGGGACAACCTCAGTCTaGCCCAGATGCTCCACTGGGGTGTACCGGAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: CHTRQVSGTTSV*PRCSTGVYRSR Trigger: GCGGCTCCGGTACACCCCAGTGGAGCATCTGGGCAAGACTGAGGTTGTCCCACTGACTTGCCGTGTATGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 72 bp | TCCTCCCAGTCCACTCCCTGGCTCTATGTCCCCCTCTaGTATCATCCTGTGCACTTTCTGAGGCCCGGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSQSTPWLYVPL*YHPVHFLRPGV Trigger: CACTCCGGGCCTCAGAAAGTGCACAGGATGATAGCAGAGGGGGACATAGAGCCAGGGAGTGGACTGGGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | TGCAGAGTTGCTCTCACAAATGGCCGAAGAGAAACCTaGCCACTATCCCTGCCTGGGCCTCCCAGGGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: CRVALTNGRRET*PLSLPGPPRDP Trigger: TGGGTCCCTGGGAGGCCCAGGCAGGGATAGTGGCCAGGTTTCTCTTCGGCCATTTGTGAGAGCAACTCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | AAATGGCCGAAGAGAAACCTGGCCACTATCCCTGCCTaGGCCTCCCAGGGACCCACGACTGTTCATGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: KWPKRNLATIPA*ASQGPTTVHAL Trigger: CAATGCATGAACAGTCGTGGGTCCCTGGGAGGCCCAGGCAGGGATAGTGGCCAGGTTTCTCTTCGGCCATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | AGGTGGAGTAGATGCAGCTGTACAGTGGTCAGGGGCTaGCTGGGAGATCGCATCACTGACCTTGGCTTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: RWSRCSCTVVRG*LGDRITDLGFN Trigger: GTTGAAGCCAAGGTCAGTGATGCGATCTCCCAGTCAGCCCCTGACCACTGTACAGCTGCATCTACTCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 90 bp | GTACTCTGGCCCCTCTCTAGGCTCTTACTCCACTTCCTGTGTTGCTaGCCTTTCTGTTTTTGTTGCCTCCTCCCAGTCCACTCCCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VLWPLSRLLLHFLCC*PFCFCCLLPVHSLA Trigger: AGCCAGGGAGTGGACTGGGAGGAGGCAACAAAAACAGAAAGGCAAGCAACACAGGAAGTGGAGTAAGAGCCTAGAGAGGGGCCAGAGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | AGGATGATGAGGCAAACCTGGATGGCTTTTGGGCCATaGGGTCTAGAATGCCCTGTCCACGATCATCCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RMMRQTWMAFGP*GLECPVHDHPH Trigger: ATGCGGATGATCGTGGACAGGGCATTCTAGACCCCATGGCCCAAAAGCCATCCAGGTTTGCCTCATCATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | CTGGGATTTGCTGCACTGAGGATGATGAGGCAAACCTaGATGGCTTTTGGGCCATGGGGTCTAGAATGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LGFAALRMMRQT*MAFGPWGLECP Trigger: AGGGCATTCTAGACCCCATGGCCCAAAAGCCATCCAGGTTTGCCTCATCATCCTCAGTGCAGCAAATCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | GGAGTAGATGCAGCTGTACAGTGGTCAGGGGCTGACTaGGAGATCGCATCACTGACCTTGGCTTCAACATTT | + |
|
Preference number: 6 (lower is better) Translates to: GVDAAVQWSGAD*EIASLTLASTF Trigger: AAATGTTGAAGCCAAGGTCAGTGATGCGATCTCCCAGTCAGCCCCTGACCACTGTACAGCTGCATCTACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | TGTAATCCATCTTGGTCTTGTCCAACTTGTCCGAACTaGGGCCAGGGGGAGGAAGGCAGCTGTGTCCTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: CNPSWSCPTCPN*GQGEEGSCVLN Trigger: ATTCAGGACACAGCTGCCTTCCTCCCCCTGGCCCAAGTTCGGACAAGTTGGACAAGACCAAGATGGATTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | CCCCTCTCTAGGCTCTTACTCCACTTCCTGTGTTGCTaGCCTTTCTGTTTTTGTTGCCTCCTCCCAGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PLSRLLLHFLCC*PFCFCCLLPVH Trigger: GTGGACTGGGAGGAGGCAACAAAAACAGAAAGGCAAGCAACACAGGAAGTGGAGTAAGAGCCTAGAGAGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | GTCATTTGGGGACAGGCTGTGTTCAATGCCTTCCTGTaGTGCTTGCATGGCTGCTCCAGATATCTCCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: VIWGQAVFNAFL*CLHGCSRYLLR Trigger: ACGGAGGAGATATCTGGAGCAGCCATGCAAGCACAACAGGAAGGCATTGAACACAGCCTGTCCCCAAATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | TGTACCTTCCTGACCTCCTGGACAACTGGTTCGGGATaGAAAGCATCTACTGCATCCCCACCAGTATTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: CTFLTSWTTGSG*KASTASPPVFG Trigger: GCCAAATACTGGTGGGGATGCAGTAGATGCTTTTCATCCCGAACCAGTTGTCCAGGAGGTCAGGAAGGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 72 bp | ATGGCTTATATGGTAACAGCACAGGCTGGGCGTCTTTaGCATGAGAAGCTGGGATTTGCTGCACTGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: MAYMVTAQAGRL*HEKLGFAALRM Trigger: CATCCTCAGTGCAGCAAATCCCAGCTTCTCATGGCAAAGACGCCCAGCCTGTGCTGTTACCATATAAGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 72 bp | CCCTCTCTAGGCTCTTACTCCACTTCCTGTGTTGCTTaGCTTTCTGTTTTTGTTGCCTCCTCCCAGTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: PSLGSYSTSCVA*LSVFVASSQST Trigger: AGTGGACTGGGAGGAGGCAACAAAAACAGAAAGGCAAGCAACACAGGAAGTGGAGTAAGAGCCTAGAGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | TTTCTATTTGAAGGTGGAGTAGATGCAGCTGTACAGTaGTCAGGGGCTGACTGGGAGATCGCATCACTGACC | + |
|
Preference number: 6 (lower is better) Translates to: FLFEGGVDAAVQ*SGADWEIASLT Trigger: GGTCAGTGATGCGATCTCCCAGTCAGCCCCTGACCACTGTACAGCTGCATCTACTCCACCTTCAAATAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | CAAGCACCAGATGGATTCTGCTGCTTCTGTCGCTCCTaGTATCTGTTCCAGAGTTCATTCAAACTCACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QAPDGFCCFCRS*YLFQSSFKLTG Trigger: CCCCGTGAGTTTGAATGAACTCTGGAACAGATACCAGGAGCGACAGAAGCAGCAGAATCCATCTGGTGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | CTGGGCGACAAAGACAGTCTATCTTGGCCAAAAGCCTaGATCAACCGGACTGTGTCAATGGTGGATATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LGDKDSLSWPKA*INRTVSMVDME Trigger: CTCCATATCCACCATTGACACAGTCCGGTTGATCCAGGCTTTTGGCCAAGATAGACTGTCTTTGTCGCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | ACAGGCTGTGTTCAATGCCTTCCTGTTGTGCTTGCATaGCTGCTCCAGATATCTCCTCCGTTGACTAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: TGCVQCLPVVLA*LLQISPPLTSD Trigger: GTCACTAGTCAACGGAGGAGATATCTGGAGCAGCCATGCAAGCACAACAGGAAGGCATTGAACACAGCCTGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | TGGGCTTTACTCCAACAGAACAGGAAGCCAAATACATaGGTGGCTCCCCAGTGTTTAGGTCAGCTGGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WALLQQNRKPNT*VAPQCLGQLVQ Trigger: CTGCACCAGCTGACCTAAACACTGGGGAGCCACCAATGTATTTGGCTTCCTGTTCTGTTGGAGTAAAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | TCTCGTGTGGCCAACTACGTCTGGAGGTTTGCATTGTaGCTGATCAGGAAAATCGGGAGAAGGGTCTGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SRVANYVWRFAL*LIRKIGRRVCN Trigger: GTTGCAGACCCTTCTCCCGATTTTCCTGATCAGCAACAATGCAAACCTCCAGACGTAGTTGGCCACACGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | CTCCTGCTGATGAAAACCACTGGACTTCTCTCTACTTaGGGAGACTATTTGTGCCCCAGTCTTCCGATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLLMKTTGLLST*GDYLCPSLPIS Trigger: GCTGATCGGAAGACTGGGGCACAAATAGTCTCCTCAAGTAGAGAGAAGTCCAGTGGTTTTCATCAGCAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | TTATATGGTAACAGCACAGGCTGGGCGTCTTTGCCATaGGAAGCTGGGATTTGCTGCACTGAGGATGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: LYGNSTGWASLP*EAGICCTEDDE Trigger: CTCATCATCCTCAGTGCAGCAAATCCCAGCTTCTCATGGCAAAGACGCCCAGCCTGTGCTGTTACCATATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | GATATCACTGGGACCTGCAAGGTCCTTCTCCAGGGATaGCATTTCTTCAGGTCCTGCCATCTTGATCACAAC | + |
|
Preference number: 6 (lower is better) Translates to: DITGTCKVLLQG*HFFRSCHLDHN Trigger: GTTGTGATCAAGATGGCAGGACCTGAAGAAATGTCATCCCTGGAGAAGGACCTTGCAGGTCCCAGTGATATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 72 bp | GGATTGCTCTGTTCTATTGATCTGGAAAGGTTGATGTaGCTGCCTCTCCATGATGATGGGCTCCGATGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GLLCSIDLERLM*LPLHDDGLRCP Trigger: AGGACATCGGAGCCCATCATCATGGAGAGGCAGGCACATCAACCTTTCCAGATCAATAGAACAGAGCAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 72 bp | GAGAGCTCTTTCGTATCACAAGCACCAGATGGATTCTaGTGCTTCTGTCGCTCCTGGTATCTGTTCCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ESSFVSQAPDGF*CFCRSWYLFQS Trigger: ACTCTGGAACAGATACCAGGAGCGACAGAAGCAGCAGAATCCATCTGGTGCTTGTGATACGAAAGAGCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | CACCAAGGAGAGCTCTTTCGTATCACAAGCACCAGATaGATTCTGCTGCTTCTGTCGCTCCTGGTATCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: HQGELFRITSTR*ILLLLSLLVSV Trigger: AACAGATACCAGGAGCGACAGAAGCAGCAGAATCCATCTGGTGCTTGTGATACGAAAGAGCTCTCCTTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | GGCCAAAAGCCTGGATCAACCGGACTGTGTCAATGGTaGATATGGAGCTGCTCCTCTCATTTAAAGGCATGT | + |
|
Preference number: 6 (lower is better) Translates to: GQKPGSTGLCQW*IWSCSSHLKAC Trigger: ACATGCCTTTAAATGAGAGGAGCAGCTCCATATCCACCATTGACACAGTCCGGTTGATCCAGGCTTTTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | AGCAGAGTGTCGGGAGATACCCTCAACATTCTGAGATaGGAGGAATGGTATTCCGGCTCACTGGTTGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SRVSGDTLNILR*EEWYSGSLVGS Trigger: AGAACCAACCAGTGAGCCGGAATACCATTCCTCCAATCTCAGAATGTTGAGGGTATCTCCCGACACTCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | TTTTCTCGTGTGGCCAACTACGTCTGGAGGTTTGCATaGTTGCTGATCAGGAAAATCGGGAGAAGGGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FSRVANYVWRFA*LLIRKIGRRVC Trigger: GCAGACCCTTCTCCCGATTTTCCTGATCAGCAACAATGCAAACCTCCAGACGTAGTTGGCCACACGAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | TGTACACCCTTGCTCACCATGCGTACAGTTTCCTCATaGGAAAGAGCAGAGTCCAAGCTCAACAAGCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: CTPLLTMRTVSS*ERAESKLNKLP Trigger: TGGGAGCTTGTTGAGCTTGGACTCTGCTCTTTCCAATGAGGAAACTGTACGCATGGTGAGCAAGGGTGTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 90 bp | AGGTTCAACAGATCGAAAAGCACAATGGCAGCTGTCTGGCCGTGGTaGTTCAGCAGTAAGAGTCCTGAAACATCCTTTCTCATGGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RFNRSKSTMAAVWPW*FSSKSPETSFLMAL Trigger: GAGAGCCATGAGAAAGGATGTTTCAGGACTCTTACTGCTGAACAACCACGGCCAGACAGCTGCCATTGTGCTTTTCGATCTGTTGAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS CAA 90 bp | GCAAGGTCCTTCTCCAGGGATGACATTTCTTCAGGTCCTGCCATCTaGATCACAACTCCTCTACTGATGACCTCTTCTTGGTTTTCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ARSFSRDDISSGPAI*ITTPLLMTSSWFSS Trigger: GGACGAAAACCAAGAAGAGGTCATCAGTAGAGGAGTTGTGATCAAGATGGCAGGACCTGAAGAAATGTCATCCCTGGAGAAGGACCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS TCA 72 bp | TTGTTAGCAGAGTGTCGGGAGATACCCTCAACATTCTaGGATTGGAGGAATGGTATTCCGGCTCACTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLAECREIPSTF*DWRNGIPAHWL Trigger: CAACCAGTGAGCCGGAATACCATTCCTCCAATCTCAGAATGTTGAGGGTATCTCCCGACACTCTGCTAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS TCA 72 bp | CATCTCTGGCTTCTGGCCAGCTGTCCTAAGAGCAGGTaGCACTTTCCGAATCTCTTCATTAAGATGCCTATC | + |
|
Preference number: 6 (lower is better) Translates to: HLWLLASCPKSR*HFPNLFIKMPI Trigger: GATAGGCATCTTAATGAAGAGATTCGGAAAGTGTCACCTGCTCTTAGGACAGCTGGCCAGAAGCCAGAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | GTGTTGGAGAGGTCATCGTCTCTTGTGCCTAGCATTTaGGGTGGAAAGTCTGGGGCAATAGCATCATTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VLERSSSLVPSI*GGKSGAIASFE Trigger: CTCAAATGATGCTATTGCCCCAGACTTTCCACCTCAAATGCTAGGCACAAGAGACGATGACCTCTCCAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 72 bp | AGCTCTTTCGTATCACAAGCACCAGATGGATTCTGCTaGTTCTGTCGCTCCTGGTATCTGTTCCAGAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSFVSQAPDGFC*FCRSWYLFQSS Trigger: TGAACTCTGGAACAGATACCAGGAGCGACAGAAGCAGCAGAATCCATCTGGTGCTTGTGATACGAAAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | GGTACTTCTGTTCCTTCTACTCTGCCGATCTCAGTCTaGGACATAGCCAAGGTTTGGGAAGAATCCCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GTSVPSTLPISV*DIAKVWEESLS Trigger: AGAAAGGGATTCTTCCCAAACCTTGGCTATGTCCCAGACTGAGATCGGCAGAGTAGAAGGAACAGAAGTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS CCA 72 bp | ACCATATGGGTGAGAAACCCCAGACTTCTGGCCAGCTaGTCCAGATTCAAATGCAACCTTTCTAGTCCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: TIWVRNPRLLAS*SRFKCNLSSPY Trigger: ATAGGGACTAGAAAGGTTGCATTTGAATCTGGACCAGCTGGCCAGAAGTCTGGGGTTTCTCACCCATATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS CCA 72 bp | AGGTTCAACAGATCGAAAAGCACAATGGCAGCTGTCTaGCCGTGGTTGTTCAGCAGTAAGAGTCCTGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: RFNRSKSTMAAV*PWLFSSKSPET Trigger: TGTTTCAGGACTCTTACTGCTGAACAACCACGGCCAGACAGCTGCCATTGTGCTTTTCGATCTGTTGAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS CCA 72 bp | GCTGGCACACAAGTAGGTTCTACTAATTCTGATGGCTaGGGATCCATGTATGCATGGACTGGCATTCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: AGTQVGSTNSDG*GSMYAWTGIPT Trigger: TGTTGGAATGCCAGTCCATGCATACATGGATCCCCAGCCATCAGAATTAGTAGAACCTACTTGTGTGCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS CCA 72 bp | AAGCCTGGATCAACCGGACTGTGTCAATGGTGGATATaGAGCTGCTCCTCTCATTTAAAGGCATGTCCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: KPGSTGLCQWWI*SCSSHLKACPY Trigger: ATAGGGACATGCCTTTAAATGAGAGGAGCAGCTCCATATCCACCATTGACACAGTCCGGTTGATCCAGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS CAA 72 bp | TCTTCTGGTCAGCAGATCCTGCTGAATGTGTATGCGTaGTTAGCAGAGTGTCGGGAGATACCCTCAACATTC | + |
|
Preference number: 6 (lower is better) Translates to: SSGQQILLNVYA*LAECREIPSTF Trigger: GAATGTTGAGGGTATCTCCCGACACTCTGCTAACAACGCATACACATTCAGCAGGATCTGCTGACCAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS CAA 72 bp | ACTCCTGCTGATGAAAACCACTGGACTTCTCTCTACTaGAGGAGACTATTTGTGCCCCAGTCTTCCGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: TPADENHWTSLY*RRLFVPQSSDQ Trigger: CTGATCGGAAGACTGGGGCACAAATAGTCTCCTCAAGTAGAGAGAAGTCCAGTGGTTTTCATCAGCAGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS CAA 72 bp | AGATCGAAAAGCACAATGGCAGCTGTCTGGCCGTGGTaGTTCAGCAGTAAGAGTCCTGAAACATCCTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RSKSTMAAVWPW*FSSKSPETSFL Trigger: GAGAAAGGATGTTTCAGGACTCTTACTGCTGAACAACCACGGCCAGACAGCTGCCATTGTGCTTTTCGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | AAACAGGGATTGCTCTGTTCTATTGATCTGGAAAGGTaGATGTGCCTGCCTCTCCATGATGATGGGCTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: KQGLLCSIDLER*MCLPLHDDGLR Trigger: TCGGAGCCCATCATCATGGAGAGGCAGGCACATCAACCTTTCCAGATCAATAGAACAGAGCAATCCCTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | AGCTGCTCCTCTCATTTAAAGGCATGTCCCTATCAGTaGGGGTCAATACATCTGAGTCCACAGGAGAATCCG | + |
|
Preference number: 6 (lower is better) Translates to: SCSSHLKACPYQ*GSIHLSPQENP Trigger: CGGATTCTCCTGTGGACTCAGATGTATTGACCCCAACTGATAGGGACATGCCTTTAAATGAGAGGAGCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 90 bp | TGTTCCTTCTACTCTGCCGATCTCAGTCTGGGACATAGCCAAGGTTaGGGAAGAATCCCTTTCTTGAGGAAGACAATGCCAAGACTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CSFYSADLSLGHSQG*GRIPFLRKTMPRLC Trigger: ACAGAGTCTTGGCATTGTCTTCCTCAAGAAAGGGATTCTTCCCAAACCTTGGCTATGTCCCAGACTGAGATCGGCAGAGTAGAAGGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 90 bp | CCTACTTTGAAACAGGGATTGCTCTGTTCTATTGATCTGGAAAGGTaGATGTGCCTGCCTCTCCATGATGATGGGCTCCGATGTCCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: PTLKQGLLCSIDLER*MCLPLHDDGLRCPL Trigger: TAGAGGACATCGGAGCCCATCATCATGGAGAGGCAGGCACATCAACCTTTCCAGATCAATAGAACAGAGCAATCCCTGTTTCAAAGTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 90 bp | TTTTTGACACCAGCCACAATCTCCAAGTTACCAGCTTGTACACCCTaGCTCACCATGCGTACAGTTTCCTCATTGGAAAGAGCAGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FLTPATISKLPACTP*LTMRTVSSLERAES Trigger: GGACTCTGCTCTTTCCAATGAGGAAACTGTACGCATGGTGAGCAAGGGTGTACAAGCTGGTAACTTGGAGATTGTGGCTGGTGTCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | TCAGCCTTCCCCTGCAGGCCCTCTGTAAGTGGATGCTaGGATATACTAAAGCAACTGTTAGCTAAGTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SAFPCRPSVSGC*DILKQLLAKSE Trigger: TTCAGACTTAGCTAACAGTTGCTTTAGTATATCTCAGCATCCACTTACAGAGGGCCTGCAGGGGAAGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072018.6 |
||
| CDS TCA 72 bp | GAACTGCTTCTTGGGCTCAGGGGGCAGTATTTGAGATaGGGAAGGAAAATCCATTTCTTTAGCTGGCACACA | + |
|
Preference number: 6 (lower is better) Translates to: ELLLGLRGQYLR*GRKIHFFSWHT Trigger: TGTGTGCCAGCTAAAGAAATGGATTTTCCTTCCTCATCTCAAATACTGCCCCCTGAGCCCAAGAAGCAGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | AACAGATCGAAAAGCACAATGGCAGCTGTCTGGCCGTaGTTGTTCAGCAGTAAGAGTCCTGAAACATCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: NRSKSTMAAVWP*LFSSKSPETSF Trigger: AAAGGATGTTTCAGGACTCTTACTGCTGAACAACCACGGCCAGACAGCTGCCATTGTGCTTTTCGATCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | ATCAAGTCTGAAGGTTCAACAGATCGAAAAGCACAATaGCAGCTGTCTGGCCGTGGTTGTTCAGCAGTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: IKSEGSTDRKAQ*QLSGRGCSAVR Trigger: TCTTACTGCTGAACAACCACGGCCAGACAGCTGCCATTGTGCTTTTCGATCTGTTGAACCTTCAGACTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | GGGAGAAGGGTATTTTCTCATCTGAAGATCTGTATGTaGGGTGTGGCTTTCCTCAAAGAGCTCTGGTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GRRVFSHLKICM*GVAFLKELWLF Trigger: GAACAACCAGAGCTCTTTGAGGAAAGCCACACCCCACATACAGATCTTCAGATGAGAAAATACCCTTCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | AAGAGAGTTCTGTTTTCTCGTGTGGCCAACTACGTCTaGAGGTTTGCATTGTTGCTGATCAGGAAAATCGGG | + |
|
Preference number: 6 (lower is better) Translates to: KRVLFSRVANYV*RFALLLIRKIG Trigger: CCCGATTTTCCTGATCAGCAACAATGCAAACCTCCAGACGTAGTTGGCCACACGAGAAAACAGAACTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | AATTTAATTCGCCTGGGCGACAAAGACAGTCTATCTTaGCCAAAAGCCTGGATCAACCGGACTGTGTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: NLIRLGDKDSLS*PKAWINRTVSM Trigger: CATTGACACAGTCCGGTTGATCCAGGCTTTTGGCCAAGATAGACTGTCTTTGTCGCCCAGGCGAATTAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | TTCTCCAGGGATGACATTTCTTCAGGTCCTGCCATCTaGATCACAACTCCTCTACTGATGACCTCTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: FSRDDISSGPAI*ITTPLLMTSSW Trigger: CCAAGAAGAGGTCATCAGTAGAGGAGTTGTGATCAAGATGGCAGGACCTGAAGAAATGTCATCCCTGGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | GAAAACACTCCTTCCCAAAGATTCATGGCAGAAGTCTaGCTCATGGGGCAGGTGCACTGGATGATGGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: ENTPSQRFMAEV*LMGQVHWMMEI Trigger: TATTTCCATCATCCAGTGCACCTGCCCCATGAGCAAGACTTCTGCCATGAATCTTTGGGAAGGAGTGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 90 bp | AGTTATCCTGTATCACTAGCAATGGAGAACACAAGACATTCAGCTTaGGCTTCTTTCCTGGACACTGTGACTGAGCTGGTAAACCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SYPVSLAMENTRHSA*ASFLDTVTELVNLP Trigger: AGGGAGGTTTACCAGCTCAGTCACAGTGTCCAGGAAAGAAGCCAAAGCTGAATGTCTTGTGTTCTCCATTGCTAGTGATACAGGATAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 90 bp | GCAGCCTTCAGGTTCAGACCTCATTACAGACCTGGCAGCTTTATATaGCCTAAAAGTTTCATCATATGCCATTCTAGCTGTGCCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AAFRFRPHYRPGSFI*PKSFIICHSSCAFC Trigger: GCAGAAGGCACAGCTAGAATGGCATATGATGAAACTTTTAGGCAATATAAAGCTGCCAGGTCTGTAATGAGGTCTGAACCTGAAGGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 90 bp | AGAGTTCTGTTTTCTCGTGTGGCCAACTACGTCTGGAGGTTTGCATaGTTGCTGATCAGGAAAATCGGGAGAAGGGTCTGCAACTATATA | + |
|
Preference number: 6 (lower is better) Translates to: RVLFSRVANYVWRFA*LLIRKIGRRVCNYI Trigger: TATATAGTTGCAGACCCTTCTCCCGATTTTCCTGATCAGCAACAATGCAAACCTCCAGACGTAGTTGGCCACACGAGAAAACAGAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | AAAGGACGTAGTAAAGGAAACCTTACTCTGTTCTTGTaGACCATCCGCAGATACTGGAGTCCCCTCTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: KGRSKGNLTLFL*TIRRYWSPLWF Trigger: AAACCAGAGGGGACTCCAGTATCTGCGGATGGTTCACAAGAACAGAGTAAGGTTTCCTTTACTACGTCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | TCTGATGGCCATGACATATATGAACACAGGACATCATaGTCTGAGTCCTTCGGGCTTTTCAGTTCATCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SDGHDIYEHRTS*SESFGLFSSSG Trigger: CCCTGATGAACTGAAAAGCCCGAAGGACTCAGATCATGATGTCCTGTGTTCATATATGTCATGGCCATCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
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| CDS GCA 72 bp | TGGCTAATGCCCAGATTAGAACAACCTACCTCTCTCTaGAATACAGCAATTCTTTCACTCTGTGCACCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: WLMPRLEQPTSL*NTAILSLCAPR Trigger: CCTTGGTGCACAGAGTGAAAGAATTGCTGTATTGCAGAGAGAGGTAGGTTGTTCTAATCTGGGCATTAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | TTCTGGTCTACTGTTCCAGTTGTACCCAAGATTTTCTaGGCCTCTTCATTTAGGTGGCTGTCTGGAAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: FWSTVPVVPKIF*ASSFRWLSGNF Trigger: GAAGTTTCCAGACAGCCACCTAAATGAAGAGGCCCAGAAAATCTTGGGTACAACTGGAACAGTAGACCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | GTGAACCATCCGCAGATACTGGAGTCCCCTCTGGTTTaGAATATCCTTCCAAATGTGAAATGTTCACTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VNHPQILESPLV*NILPNVKCSLV Trigger: CACAAGTGAACATTTCACATTTGGAAGGATATTCCAAACCAGAGGGGACTCCAGTATCTGCGGATGGTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | GTATCACTAGCAATGGAGAACACAAGACATTCAGCTTaGGCTTCTTTCCTGGACACTGTGACTGAGCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: VSLAMENTRHSA*ASFLDTVTELV Trigger: TACCAGCTCAGTCACAGTGTCCAGGAAAGAAGCCAAAGCTGAATGTCTTGTGTTCTCCATTGCTAGTGATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 90 bp | CTCTGTTCTTGTGAACCATCCGCAGATACTGGAGTCCCCTCTGGTTaGGAATATCCTTCCAAATGTGAAATGTTCACTTGTGTTTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LCSCEPSADTGVPSG*EYPSKCEMFTCVCL Trigger: AAGGCAAACACAAGTGAACATTTCACATTTGGAAGGATATTCCAAACCAGAGGGGACTCCAGTATCTGCGGATGGTTCACAAGAACAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | GTACTGGAGTTGGAAAACTGGGCTCTAGAATTATCTTaGTATGATGACTGCTGCCATACACGGCAAGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VLELENWALELS*YDDCCHTRQVS Trigger: ACTGACTTGCCGTGTATGGCAGCAGTCATCATATCAAGATAATTCTAGAGCCCAGTTTTCCAACTCCAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | CTCTTCTTGGTGAAAACTCCCAGGCTTTATTTCCTGTaGGTAAGCAGAAGAGACTACTGCTGCTCCAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: LFLVKTPRLYFL*VSRRDYCCSNL Trigger: AAGATTGGAGCAGCAGTAGTCTCTTCTGCTTACTCACAGGAAATAAAGCCTGGGAGTTTTCACCAAGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | TTGTGCTTGCATGGCTGCTCCAGATATCTCCTCCGTTaGCTAGTGACAGTACTGTATAATTTAATTCGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LCLHGCSRYLLR*LVTVLYNLIRL Trigger: CAGGCGAATTAAATTATACAGTACTGTCACTAGTCAACGGAGGAGATATCTGGAGCAGCCATGCAAGCACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS TCA 72 bp | ACTTGGTCTTTATCAGCCAAGTTGCCTTCTGGCTGCTaGGTGTCCTTTTCTGATGGCCATGACATATATGAA | + |
|
Preference number: 6 (lower is better) Translates to: TWSLSAKLPSGC*VSFSDGHDIYE Trigger: TTCATATATGTCATGGCCATCAGAAAAGGACACTCAGCAGCCAGAAGGCAACTTGGCTGATAAAGACCAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
||
| CDS CCA 72 bp | GACGACTCGGAAGAATTCAAGTTATCCATCAGCTCTTaGACATGTTCTGAGATAAGCTGGTGCTTTTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: DDSEEFKLSISS*TCSEISWCFSL Trigger: CAGTGAAAAGCACCAGCTTATCTCAGAACATGTCCAAGAGCTGATGGATAACTTGAATTCTTCCGAGTCGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS CCA 72 bp | TCTACTAATTCTGATGGCTGGGGATCCATGTATGCATaGACTGGCATTCCAACACCCTTGCTAATTTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: STNSDGWGSMYA*TGIPTPLLILM Trigger: CATCAAAATTAGCAAGGGTGTTGGAATGCCAGTCCATGCATACATGGATCCCCAGCCATCAGAATTAGTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | TGTGAACCATCCGCAGATACTGGAGTCCCCTCTGGTTaGGAATATCCTTCCAAATGTGAAATGTTCACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CEPSADTGVPSG*EYPSKCEMFTC Trigger: ACAAGTGAACATTTCACATTTGGAAGGATATTCCAAACCAGAGGGGACTCCAGTATCTGCGGATGGTTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS CAA 90 bp | TGCAACCTTTCTAGTCCCTATAGGTACACGACTGTCTGGCAACTCTaGGTGGTAAATATTAGCAGGTTTCATTTTGTGCTGGTAGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CNLSSPYRYTTVWQL*VVNISRFHFVLVGS Trigger: AGAACCTACCAGCACAAAATGAAACCTGCTAATATTTACCACCAAGAGTTGCCAGACAGTCGTGTACCTATAGGGACTAGAAAGGTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS CAA 90 bp | CTGTTTAATGGATTTAGTGTCTGGCAGATTTTCAGTTTTTCTGTCTaGTACAGTGATATCACTGGGACCTGCAAGGTCCTTCTCCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LFNGFSVWQIFSFSV*YSDITGTCKVLLQG Trigger: TCCCTGGAGAAGGACCTTGCAGGTCCCAGTGATATCACTGTACAAGACAGAAAAACTGAAAATCTGCCAGACACTAAATCCATTAAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS TCA 72 bp | TTAAGATCTCTAGGAGAAATCTGCTCTTCGGGGATATaGGGCTTAAATACCCCTAAAGATGGTCCACTACAC | + |
|
Preference number: 6 (lower is better) Translates to: LRSLGEICSSGI*GLNTPKDGPLH Trigger: GTGTAGTGGACCATCTTTAGGGGTATTTAAGCCTCATATCCCCGAAGAGCAGATTTCTCCTAGAGATCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS GCA 72 bp | TACCTCTCTCTGCAATACAGCAATTCTTTCACTCTGTaGACCAAGGTTTTCATAAAGGCTGGAGTACTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: YLSLQYSNSFTL*TKVFIKAGVLS Trigger: GCTAAGTACTCCAGCCTTTATGAAAACCTTGGTGCACAGAGTGAAAGAATTGCTGTATTGCAGAGAGAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 72 bp | CTACCATCAGCTAAAATAGTCACCGGTGTAGAACCATaGCTTTCAAGTGATGACTGGAAAGAGGTTTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LPSAKIVTGVEP*LSSDDWKEVFC Trigger: ACAGAAAACCTCTTTCCAGTCATCACTTGAAAGGCATGGTTCTACACCGGTGACTATTTTAGCTGATGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | GAAAGAGTGATCTTCTCTTATTTCACGATCTACATGTaGGGCTTTGCTTTGTTCAGAGAGTTTTGGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ERVIFSYFTIYM*GFALFREFWLL Trigger: GAGCAGCCAAAACTCTCTGAACAAAGCAAAGCCCCACATGTAGATCGTGAAATAAGAGAAGATCACTCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | TTGAAACAAGGAATCAGGCTCAACCTCTTCTTGGTCTaGTATCAAACATGTCAGCAAAGGCAAATCAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LKQGIRLNLFLV*YQTCQQRQIRS Trigger: GCTCCTGATTTGCCTTTGCTGACATGTTTGATACAAGACCAAGAAGAGGTTGAGCCTGATTCCTTGTTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 90 bp | CCTCGCTCTCTGACAACCACTCCTCTTCTCGGCTATCTGTTATACTaGTCTTGGGTGAAGTATATGGAAAGAAGTTTAGAAAAACATCAG | + |
|
Preference number: 6 (lower is better) Translates to: PRSLTTTPLLGYLLY*SWVKYMERSLEKHQ Trigger: CTGATGTTTTTCTAAACTTCTTTCCATATACTTCACCCAAGACAAGTATAACAGATAGCCGAGAAGAGGAGTGGTTGTCAGAGAGCGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 90 bp | AACATCCTATGCCTTGTGGACTTCGTAAGCCCTCAGACATGTGAGTaGCTCTTCCATGACCAAACAACTTTGCTTTTATCTCTTCTACTT | + |
|
Preference number: 6 (lower is better) Translates to: NILCLVDFVSPQTCE*LFHDQTTLLLSLLL Trigger: AAGTAGAAGAGATAAAAGCAAAGTTGTTTGGTCATGGAAGAGCAACTCACATGTCTGAGGGCTTACGAAGTCCACAAGGCATAGGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | AAGCAGAAACCAGATGAGACTGCAGGTTTCTTTTTCTaGTCAGATAGTCCTGGAACAGTTGAAGCCTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: KQKPDETAGFFF*SDSPGTVEAFK Trigger: TTTGAAGGCTTCAACTGTTCCAGGACTATCTGATCAGAAAAAGAAACCTGCAGTCTCATCTGGTTTCTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | CCATTATTCTCTTGTTCAAACATGAAAAGAGAGTGCTaGGACCCAAAAGTTGTGCTACCTGTAAGTGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: PLFSCSNMKREC*DPKVVLPVSGC Trigger: GCATCCACTTACAGGTAGCACAACTTTTGGGTCTCAGCACTCTCTTTTCATGTTTGAACAAGAGAATAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
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| CDS GCA 72 bp | GGTTCAGACCTCATTACAGACCTGGCAGCTTTATATTaGCTAAAAGTTTCATCATATGCCATTCTAGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GSDLITDLAALY*LKVSSYAILAV Trigger: CACAGCTAGAATGGCATATGATGAAACTTTTAGGCAATATAAAGCTGCCAGGTCTGTAATGAGGTCTGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 72 bp | ATAGTCTTACTATCTGGAAGAGAAGACTGTGCGACTTaGAAGTCCAGTGGAGATTTAGGTCCTAGAAAAACT | + |
|
Preference number: 6 (lower is better) Translates to: IVLLSGREDCAT*KSSGDLGPRKT Trigger: AGTTTTTCTAGGACCTAAATCTCCACTGGACTTGCAAGTCGCACAGTCTTCTCTTCCAGATAGTAAGACTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | TATGAAAGAGAGAATTCTGATGGTAAAGGAGTCTTCTaGTTACCTAGGCCAGGAATAACAGAAACTGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: YERENSDGKGVF*LPRPGITETGH Trigger: ATGGCCAGTTTCTGTTATTCCTGGCCTAGGTAACCAGAAGACTCCTTTACCATCAGAATTCTCTCTTTCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | TTTTCTCTTCTCCTCTTCTCTCTTCTTCTTCACTTCTaGAAGCTGCTCATAAATTCGTCTGGTCCTCTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: FSLLLFSLLLHF*KLLINSSGPLN Trigger: ATTCAGAGGACCAGACGAATTTATGAGCAGCTTCCAGAAGTGAAGAAGAAGAGAGAAGAGGAGAAGAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | TTTGAATCTGCTGGTTCAAACACCCCAGGAGTAGACTaGTATTTCAGGTACTTAAGCTTATCGATGAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FESAGSNTPGVD*YFRYLSLSMKE Trigger: CTCTTTCATCGATAAGCTTAAGTACCTGAAATACCAGTCTACTCCTGGGGTGTTTGAACCAGCAGATTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
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| CDS CAA 72 bp | ATCCTTCCAAATGTGAAATGTTCACTTGTGTTTGCCTaGAGGTTACTATCTGGCTATTCTGAGGAGGTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: ILPNVKCSLVFA*RLLSGYSEEVW Trigger: CCAAACCTCCTCAGAATAGCCAGATAGTAACCTCAAGGCAAACACAAGTGAACATTTCACATTTGGAAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 90 bp | TTCACTTTGTTGAAACAAGGAATCAGGCTCAACCTCTTCTTGGTCTaGTATCAAACATGTCAGCAAAGGCAAATCAGGAGCAGCAAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: FTLLKQGIRLNLFLV*YQTCQQRQIRSSKV Trigger: AACTTTGCTGCTCCTGATTTGCCTTTGCTGACATGTTTGATACAAGACCAAGAAGAGGTTGAGCCTGATTCCTTGTTTCAACAAAGTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 90 bp | GTTTTCGAACCACGATCTATATTCTGCATTTCCTCACAGCCAGCATaGGCAAAACCTAAAGATTCTGGCTTACATATGATAACTCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: VFEPRSIFCISSQPA*AKPKDSGLHMITPS Trigger: TGATGGAGTTATCATATGTAAGCCAGAATCTTTAGGTTTTGCCAATGCTGGCTGTGAGGAAATGCAGAATATAGATCGTGGTTCGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | CATCGATTTGTGAATTTAGAGGCATACTATCCACACTaGGACAAGACGACTCGGAAGAATTCAAGTTATCCA | + |
|
Preference number: 6 (lower is better) Translates to: HRFVNLEAYYPH*DKTTRKNSSYP Trigger: TGGATAACTTGAATTCTTCCGAGTCGTCTTGTCTCAGTGTGGATAGTATGCCTCTAAATTCACAAATCGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | CTGTACATATTCAATGTGTGGAACTTCTTCTACAAATaGTTCCCTCTGGGTACAAACATCAGTTGTGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LYIFNVWNFFYK*FPLGTNISCGG Trigger: TCCTCCACAACTGATGTTTGTACCCAGAGGGAATCATTTGTAGAAGAAGTTCCACACATTGAATATGTACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | TCTTCTGCTGGAGTCCTTAAACAAACATTCTCAAGATaGTTATCAGCGATCAAAGGAGCCTCTTTTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSAGVLKQTFSR*LSAIKGASFPL Trigger: AAGAGGAAAAGAGGCTCCTTTGATCGCTGATAATCATCTTGAGAATGTTTGTTTAAGGACTCCAGCAGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
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| CDS TCA 72 bp | CCAATATACTTTATCTCTGGATATCTGGTATGCACCTaGGAAGATGCCCAAGTATTTCTAGTCTCCTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PIYFISGYLVCT*EDAQVFLVSFC Trigger: GCAAAAGGAGACTAGAAATACTTGGGCATCTTCTCAGGTGCATACCAGATATCCAGAGATAAAGTATATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
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| CDS CCA 72 bp | TCTTCAGTTAGTAGACTGTCTGATAATGTGGAAAGCTaGTGGAAAGCTTTATTACCAGCTGATCCACAAACA | + |
|
Preference number: 6 (lower is better) Translates to: SSVSRLSDNVES*WKALLPADPQT Trigger: TGTTTGTGGATCAGCTGGTAATAAAGCTTTCCACCAGCTTTCCACATTATCAGACAGTCTACTAACTGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | TCAATGTGTGGAACTTCTTCTACAAATGATTCCCTCTaGGTACAAACATCAGTTGTGGAGGATTCTTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SMCGTSSTNDSL*VQTSVVEDSLK Trigger: CTTCAAAGAATCCTCCACAACTGATGTTTGTACCCAGAGGGAATCATTTGTAGAAGAAGTTCCACACATTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | AATGAAACCTTTCACCTAAGGTTCCACTATCCAACTTaGAAGAAGTCTTGGGACAAAGAGTTATACGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: NETFHLRFHYPT*KKSWDKELYEH Trigger: GTGTTCGTATAACTCTTTGTCCCAAGACTTCTTCCAAGTTGGATAGTGGAACCTTAGGTGAAAGGTTTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | AGCCTGAATGTGAGCTCTCAACAGTGGTATCAGATTTaGAATCCAGATATGAAGGAACTCTTTTTAACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLNVSSQQWYQI*NPDMKELFLTV Trigger: CACTGTTAAAAAGAGTTCCTTCATATCTGGATTCCAAATCTGATACCACTGTTGAGAGCTCACATTCAGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | ATCTTGATCACAACTCCTCTACTGATGACCTCTTCTTaGTTTTCGTCCAAGACATTCTCATCCCAAGTTATA | + |
|
Preference number: 6 (lower is better) Translates to: ILITTPLLMTSS*FSSKTFSSQVI Trigger: TATAACTTGGGATGAGAATGTCTTGGACGAAAACCAAGAAGAGGTCATCAGTAGAGGAGTTGTGATCAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CCA 72 bp | TTAGGAAGAGGAGTAATTTTACATGGGAAAGAAGCATaGTCCTTACTGGCTAGACATGCTTCAGTTTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LGRGVILHGKEA*SLLARHASVCC Trigger: ACAACAAACTGAAGCATGTCTAGCCAGTAAGGACCATGCTTCTTTCCCATGTAAAATTACTCCTCTTCCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
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| CDS CAA 72 bp | CAGGCAGAAGTACTGGTAGAACTGTATTTACAACAGTaGGCTCAGAGACAGTTGAAATCTTCGGAATATCTT | + |
|
Preference number: 6 (lower is better) Translates to: QAEVLVELYLQQ*AQRQLKSSEYL Trigger: AAGATATTCCGAAGATTTCAACTGTCTCTGAGCCAACTGTTGTAAATACAGTTCTACCAGTACTTCTGCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | CCACGATCTATATTCTGCATTTCCTCACAGCCAGCATaGGCAAAACCTAAAGATTCTGGCTTACATATGATA | + |
|
Preference number: 6 (lower is better) Translates to: PRSIFCISSQPA*AKPKDSGLHMI Trigger: TATCATATGTAAGCCAGAATCTTTAGGTTTTGCCAATGCTGGCTGTGAGGAAATGCAGAATATAGATCGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | TCCCTCTGGGTACAAACATCAGTTGTGGAGGATTCTTaGAAGCAAACCACCTTCTTTGATCGTATAAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLWVQTSVVEDS*KQTTFFDRINE Trigger: TTCATTTATACGATCAAAGAAGGTGGTTTGCTTCAAAGAATCCTCCACAACTGATGTTTGTACCCAGAGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | AGGTTCAGACCTCATTACAGACCTGGCAGCTTTATATaGCCTAAAAGTTTCATCATATGCCATTCTAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RFRPHYRPGSFI*PKSFIICHSSC Trigger: ACAGCTAGAATGGCATATGATGAAACTTTTAGGCAATATAAAGCTGCCAGGTCTGTAATGAGGTCTGAACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | ACATCAGAAACAGATTCCAAAGACTCTGGTAAATTGTaGTCCCATGAGCAGCAACCATCACTTACATCACTA | + |
|
Preference number: 6 (lower is better) Translates to: TSETDSKDSGKL*SHEQQPSLTSL Trigger: TAGTGATGTAAGTGATGGTTGCTGCTCATGGGACAACAATTTACCAGAGTCTTTGGAATCTGTTTCTGATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | GAGCCTGAATGTGAGCTCTCAACAGTGGTATCAGATTaGGAATCCAGATATGAAGGAACTCTTTTTAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: EPECELSTVVSD*ESRYEGTLFNS Trigger: ACTGTTAAAAAGAGTTCCTTCATATCTGGATTCCAAATCTGATACCACTGTTGAGAGCTCACATTCAGGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | AATCTGCTCAATCTTGAACTGACTGGATTTCCCACCTaGATGAGGAGAAAACACTTTGCTTTTCCTAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: NLLNLELTGFPT*MRRKHFAFPKV Trigger: GACTTTAGGAAAAGCAAAGTGTTTTCTCCTCATCAAGGTGGGAAATCCAGTCAGTTCAAGATTGAGCAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 72 bp | AGGGGCATTAGATGGTACAGTTTCTCCATTATTCTCTaGTTCAAACATGAAAAGAGAGTGCTGAGACCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RGIRWYSFSIIL*FKHEKRVLRPK Trigger: TTTGGGTCTCAGCACTCTCTTTTCATGTTTGAACAAGAGAATAATGGAGAAACTGTACCATCTAATGCCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
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| CDS CAA 90 bp | AGTAAGAACCAGGCAGAAGTACTGGTAGAACTGTATTTACAACAGTaGGCTCAGAGACAGTTGAAATCTTCGGAATATCTTCACTTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: SKNQAEVLVELYLQQ*AQRQLKSSEYLHFD Trigger: ATCAAAGTGAAGATATTCCGAAGATTTCAACTGTCTCTGAGCCAACTGTTGTAAATACAGTTCTACCAGTACTTCTGCCTGGTTCTTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 90 bp | CTCTCTGACAACCACTCCTCTTCTCGGCTATCTGTTATACTTGTCTaGGGTGAAGTATATGGAAAGAAGTTTAGAAAAACATCAGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: LSDNHSSSRLSVILV*GEVYGKKFRKTSET Trigger: TGTTTCTGATGTTTTTCTAAACTTCTTTCCATATACTTCACCCAAGACAAGTATAACAGATAGCCGAGAAGAGGAGTGGTTGTCAGAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS CAA 90 bp | GTTTGGAATATCCTTCCAAATGTGAAATGTTCACTTGTGTTTGCCTaGAGGTTACTATCTGGCTATTCTGAGGAGGTTTGGTTTTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: VWNILPNVKCSLVFA*RLLSGYSEEVWFSS Trigger: ACTTGAAAACCAAACCTCCTCAGAATAGCCAGATAGTAACCTCAAGGCAAACACAAGTGAACATTTCACATTTGGAAGGATATTCCAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | ACTTTCACAACATCTTCGGGCAGGTTCTTTCCTCTATaGGAATATGAAAGAGAGAATTCTGATGGTAAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TFTTSSGRFFPL*EYERENSDGKG Trigger: TCCTTTACCATCAGAATTCTCTCTTTCATATTCTCATAGAGGAAAGAACCTGCCCGAAGATGTTGTGAAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS TCA 72 bp | AATGATGGTGAAAGAAATCCTTCCAAGAATGTTGCATaGAAACACTCCTTCCCAAAGATTCATGGCAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: NDGERNPSKNVA*KHSFPKIHGRS Trigger: ACTTCTGCCATGAATCTTTGGGAAGGAGTGTTTTCATGCAACATTCTTGGAAGGATTTCTTTCACCATCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 72 bp | ATTTCCTTAAGAGTTTTCGAACCACGATCTATATTCTaGATTTCCTCACAGCCAGCATTGGCAAAACCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: ISLRVFEPRSIF*ISSQPALAKPK Trigger: TTTAGGTTTTGCCAATGCTGGCTGTGAGGAAATGCAGAATATAGATCGTGGTTCGAAAACTCTTAAGGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
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| CDS GCA 72 bp | CTTTATCTCTGGATATCTGGTATGCACCTGAGAAGATaGCCAAGTATTTCTAGTCTCCTTTTGCTTAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LYLWISGMHLRR*PSISSLLLLKE Trigger: TTCTTTAAGCAAAAGGAGACTAGAAATACTTGGGCATCTTCTCAGGTGCATACCAGATATCCAGAGATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
||
| CDS CCA 72 bp | CAGAAGACACTACTGGTATTTGAGTTTTCTGTTCAGTaGATCCAACATCACCTAGAACTTTCAAAGCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: QKTLLVFEFSVQ*IQHHLELSKPF Trigger: AAAAGGCTTTGAAAGTTCTAGGTGATGTTGGATCCACTGAACAGAAAACTCAAATACCAGTAGTGTCTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS CAA 90 bp | ACAAATGATTCCCTCTGGGTACAAACATCAGTTGTGGAGGATTCTTaGAAGCAAACCACCTTCTTTGATCGTATAAATGAAACATCGTTA | + |
|
Preference number: 6 (lower is better) Translates to: TNDSLWVQTSVVEDS*KQTTFFDRINETSL Trigger: TAACGATGTTTCATTTATACGATCAAAGAAGGTGGTTTGCTTCAAAGAATCCTCCACAACTGATGTTTGTACCCAGAGGGAATCATTTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS TCA 72 bp | TTCAGTGCCATATTTTCTGCTTCCATCAAGAGAGTCTaGATTTCCTTAAGAGTTTTCGAACCACGATCTATA | + |
|
Preference number: 6 (lower is better) Translates to: FSAIFSASIKRV*ISLRVFEPRSI Trigger: TATAGATCGTGGTTCGAAAACTCTTAAGGAAATTCAGACTCTCTTGATGGAAGCAGAAAATATGGCACTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS TCA 72 bp | CTATTAATCCTTGTTTTAGAAGCAGGATCCAATGAATaGAACCTTTCACCTAAGGTTCCACTATCCAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLILVLEAGSNE*NLSPKVPLSNL Trigger: CAAGTTGGATAGTGGAACCTTAGGTGAAAGGTTTCATTCATTGGATCCTGCTTCTAAAACAAGGATTAATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS TCA 72 bp | CTCACTTATAAGACTCTCTTGATTGGAAGACTCAATTaGGGCAATAATTGCCTCAAAGGCTACATTTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LTYKTLLIGRLN*GNNCLKGYIFS Trigger: ACTGAAAATGTAGCCTTTGAGGCAATTATTGCCTCAATTGAGTCTTCCAATCAAGAGAGTCTTATAAGTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
||
| CDS CAA 72 bp | AACCACTCCTCTTCTCGGCTATCTGTTATACTTGTCTaGGGTGAAGTATATGGAAAGAAGTTTAGAAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: NHSSSRLSVILV*GEVYGKKFRKT Trigger: TGTTTTTCTAAACTTCTTTCCATATACTTCACCCAAGACAAGTATAACAGATAGCCGAGAAGAGGAGTGGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072018.6 ENSMUST00000213058.2 |
||
| CDS TCA 72 bp | GCTTCAGTTTGTTGTAAGGCTTTCTGGTTCCAATACTaGTTACATGAACAAGAAACACCAAAACTGTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: ASVCCKAFWFQY*LHEQETPKLLF Trigger: AAACAACAGTTTTGGTGTTTCTTGTTCATGTAATCAGTATTGGAACCAGAAAGCCTTACAACAAACTGAAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213058.2 |
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