Pregenerated sensors for ALLC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020636Ensembl transcript IDs: ENSMUST00000020965.14, ENSMUST00000110917.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | GATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTaGAGACAGTGGGTATGTACTATGGTGGATGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: DRFIGTTRCSEH*RQWVCTMVDEL Trigger: GAGCTCATCCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR GCA 90 bp | CCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGGATGAGCTGCACCCATCCACTTTaGAGCTGTTGGGACAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPGVQNTEDSGYVLWWMSCTHPL*SCWDSC Trigger: GCAACTGTCCCAACAGCTGCAAAGTGGATGGGTGCA...GCTCATCCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR GCA 90 bp | TTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGGCCAGTGTGGTCAGGATaGACCCATCCACTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEPPGVQNTEDSGYVLWWPVWSG*THPLCS Trigger: GCTGCAAAGTGGATGGGTGCATCCTGACCACACTGG...CCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR TCA 90 bp | TTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGGGTTCGCTGCTTGGATTaGCATGCGAGGAGCATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LEPPGVQNTEDSGYVLWWVRCLD*HARSMV Trigger: AACCATGCTCCTCGCATGTCAATCCAAGCAGCGAAC...CCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGGATGAGCTCTCTGCTTGGATTGACATaGGAGGAGCATGGTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGVQNTEDSGYVLWWMSSLLGLT*EEHGSL Trigger: CAGGGAACCATGCTCCTCGCATGTCAATCCAAGCAG...AGAGCTCATCCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR GCA 90 bp | TGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGGATTCTGTGGAATCCAATaGAGCCCAGTCCCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WNHQVFRTLKTVGMYYGGFCGIQ*SPVPLS Trigger: GGACAGAGGGACTGGGCTGCATTGGATTCCACAGAA...TCCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR GCA 90 bp | TTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGCCAATCGGAACACTaGCCACTCACAACCCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLEPPGVQNTEDSGYVLWCQSEH*PLTTRD Trigger: GTCCCGGGTTGTGAGTGGGCAGTGTTCCGATTGGCA...CCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR GCA 90 bp | TTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGGTGCACCCATCCACTTTaGAGCTGTTGGGACAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEPPGVQNTEDSGYVLWWCTHPL*SCWDSC Trigger: GCAACTGTCCCAACAGCTGCAAAGTGGATGGGTGCA...CCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR GCA 90 bp | ATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTATGCCAATCGGAACACTaGCCACTCACAACCCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IVLLEPPGVQNTEDSGYVCQSEH*PLTTRD Trigger: GTCCCGGGTTGTGAGTGGGCAGTGTTCCGATTGGCA...TACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR GCA 90 bp | TCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACCCAGTGTGGTCAGGATaGACCCATCCACTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFYWNHQVFRTLKTVGMYPVWSG*THPLCS Trigger: GCTGCAAAGTGGATGGGTGCATCCTGACCACACTGG...GTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CCA 90 bp | TGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGGACACCCCCAAAAGCAATaGCTACCAGGTCTACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WNHQVFRTLKTVGMYYGGHPQKQ*LPGLQV Trigger: AACCTGTAGACCTGGTAGCCATTGCTTTTGGGGGTG...TCCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR TCA 90 bp | TTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGGAGGAGCATGGTTCCCTaGGAAGTAAGAAATGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LEPPGVQNTEDSGYVLWWRSMVP*EVRNVH Trigger: GTGGACATTTCTTACTTCTCAGGGAACCATGCTCCT...CCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR GCA 90 bp | TATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTTTCTGTGGAATCCAATaGAGCCCAGTCCCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YWNHQVFRTLKTVGMYYGFCGIQ*SPVPLS Trigger: GGACAGAGGGACTGGGCTGCATTGGATTCCACAGAA...ACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR GCA 90 bp | TTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGGATGACTCCAGGATGTaGCAATCGGAACACTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLEPPGVQNTEDSGYVLWDDSRM*QSEHCP Trigger: TGGGCAGTGTTCCGATTGGCACATCCTGGAGTCATC...CCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR TCA 90 bp | GTGATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGACTGTCGCTCTTTATaGGATTCTCTGCAGGACCGA | + |
|
Preference number: 4 (lower is better) Translates to: VIVLLEPPGVQNTEDSGYDCRSL*DSLQDR Trigger: TCGGTCCTGCAGAGAATCTCATAAAGAGCGACAGTC...ATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR TCA 90 bp | CCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGGATGAGCCATCTGGGAAGATGTTaGGTCTTATATGAGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PPGVQNTEDSGYVLWWMSHLGRC*VLYESI Trigger: GATGGACTCATATAAGACTCAACATCTTCCCAGATG...GCTCATCCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CCA 90 bp | TATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTCACCCCCAAAAGCAATaGCTACCAGGTCTACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YWNHQVFRTLKTVGMYYGHPQKQ*LPGLQV Trigger: AACCTGTAGACCTGGTAGCCATTGCTTTTGGGGGTG...ACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CCA 90 bp | ATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTTCCTCTTCCAGTGTaGTCAGGATGCACCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: IVLLEPPGVQNTEDSGYVLPLPV*SGCTHP Trigger: TGGATGGGTGCATCCTGACCACACTGGAAGAGGAAG...TACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR TCA 90 bp | ATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTAGACTGTCGCTCTTTATaGGATTCTCTGCAGGACCGA | + |
|
Preference number: 4 (lower is better) Translates to: IVLLEPPGVQNTEDSGYVDCRSL*DSLQDR Trigger: TCGGTCCTGCAGAGAATCTCATAAAGAGCGACAGTC...TACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR TCA 90 bp | GTGATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATAGGAGCATGGTTCCCTaGGAAGTAAGAAATGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VIVLLEPPGVQNTEDSGYRSMVP*EVRNVH Trigger: GTGGACATTTCTTACTTCTCAGGGAACCATGCTCCT...ATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR GCA 90 bp | CCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGGATGAGCCTTTATGAGATTCTCTaGAGGACCGAAAAAGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PPGVQNTEDSGYVLWWMSLYEIL*RTEKVI Trigger: GATGACTTTTTCGGTCCTGCAGAGAATCTCATAAAG...GCTCATCCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR GCA 90 bp | TTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATCTGCTTGGATTGACATaGGAGGAGCATGGTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FYWNHQVFRTLKTVGMYYLLGLT*EEHGSL Trigger: CAGGGAACCATGCTCCTCGCATGTCAATCCAAGCAG...ATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTGGATGTCCAAAGTGTaGATTACTAAATCCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: GVIVLLEPPGVQNTEDSGWMSKV*ITKSHT Trigger: TGTGTGGGATTTAGTAATGCACACTTTGGACATCCA...CCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGATCACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CCA 90 bp | GAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGGATGTGCAACACCACCATCTaGGAAGATGTTGAGTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: EPPGVQNTEDSGYVLWWMCNTTI*EDVESY Trigger: ATAAGACTCAACATCTTCCCAGATGGTGGTGTTGCA...CATCCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR GCA 90 bp | TTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGGCCAAATCAATCAGCTaGGTGAAGTCCAGAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLEPPGVQNTEDSGYVLWAKSIS*VKSRNL Trigger: CAGATTTCTGGACTTCACGCAGCTGATTGATTTGGC...CCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR GCA 90 bp | TCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACGCCAAATCAATCAGCTaGGTGAAGTCCAGAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFYWNHQVFRTLKTVGMYAKSIS*VKSRNL Trigger: CAGATTTCTGGACTTCACGCAGCTGATTGATTTGGC...GTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR GCA 90 bp | TTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGGCTTTATGAGATTCTCTaGAGGACCGAAAAAGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LEPPGVQNTEDSGYVLWWLYEIL*RTEKVI Trigger: GATGACTTTTTCGGTCCTGCAGAGAATCTCATAAAG...CCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR GCA 90 bp | TGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGGAATCCATCCACCCATTTaGCAAACTCAGTGTATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WNHQVFRTLKTVGMYYGGIHPPI*QTQCIH Trigger: ATGAATACACTGAGTTTGGCAAATGGGTGGATGGAT...TCCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR TCA 90 bp | TATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTCCTTGGTGGGATGTTTaGCATTGTATCTTCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: YWNHQVFRTLKTVGMYYGPWWDV*HCIFFT Trigger: AGTGAAGAAGATACAATGTCAAACATCCCACCAAGG...ACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR TCA 90 bp | GTGATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATATGTTGAGTCTTATATaGGTCCATCTCTGCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VIVLLEPPGVQNTEDSGYMLSLI*VHLCWE Trigger: TTCCCAGCAGAGATGGACTCATATAAGACTCAACAT...ATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR TCA 90 bp | TCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACCATCTGGGAAGATGTTaGGTCTTATATGAGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SFYWNHQVFRTLKTVGMYHLGRC*VLYESI Trigger: GATGGACTCATATAAGACTCAACATCTTCCCAGATG...GTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR TCA 90 bp | TGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGGAGTATCAATTTCAATTTaGGTGATGACTCCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: WNHQVFRTLKTVGMYYGGVSISI*VMTPGC Trigger: ACATCCTGGAGTCATCACTCAAATTGAAATTGATAC...TCCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR TCA 90 bp | TCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACGATTCCAATTATGCCTaGTCATGTCTTCCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFYWNHQVFRTLKTVGMYDSNYA*SCLPLP Trigger: TGGAAGAGGAAGACATGATCAGGCATAATTGGAATC...GTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CCA 90 bp | TTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGCAACACCACCATCTaGGAAGATGTTGAGTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLEPPGVQNTEDSGYVLWCNTTI*EDVESY Trigger: ATAAGACTCAACATCTTCCCAGATGGTGGTGTTGCA...CCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGGGTGATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTAACGACTTCCACTTATaGGCAGGAAGATTCCAATTA | + |
|
Preference number: 4 (lower is better) Translates to: CGVIVLLEPPGVQNTEDSNDFHL*AGRFQL Trigger: TAATTGGAATCTTCCTGCCCATAAGTGGAAGTCGTT...ACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGATCACCCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR TCA 90 bp | ATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACCTTGGTGGGATGTTTaGCATTGTATCTTCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: IVLLEPPGVQNTEDSGYVPWWDV*HCIFFT Trigger: AGTGAAGAAGATACAATGTCAAACATCCCACCAAGG...TACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR TCA 90 bp | ATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTAATGTTGAGTCTTATATaGGTCCATCTCTGCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IVLLEPPGVQNTEDSGYVMLSLI*VHLCWE Trigger: TTCCCAGCAGAGATGGACTCATATAAGACTCAACAT...TACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGGGTGATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGTATCAATTTCAATTTaGGTGATGACTCCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: CGVIVLLEPPGVQNTEDSVSISI*VMTPGC Trigger: ACATCCTGGAGTCATCACTCAAATTGAAATTGATAC...ACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGATCACCCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR TCA 90 bp | ATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTAGATTCCAATTATGCCTaGTCATGTCTTCCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IVLLEPPGVQNTEDSGYVDSNYA*SCLPLP Trigger: TGGAAGAGGAAGACATGATCAGGCATAATTGGAATC...TACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR GCA 90 bp | ATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTATGGATGTCCAAAGTGTaGATTACTAAATCCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: IVLLEPPGVQNTEDSGYVWMSKV*ITKSHT Trigger: TGTGTGGGATTTAGTAATGCACACTTTGGACATCCA...TACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS GCA 90 bp | CCCAAAAGCAATGGCTACCAGGTCTACAGGTTCTGTGGAATCCAATaGAGCCCAGTCCCTCTGTCCAGTACCGTATACTCGAAGGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PKSNGYQVYRFCGIQ*SPVPLSSTVYSKAC Trigger: GCACGCCTTCGAGTATACGGTACTGGACAGAGGGACTGGGCTGCATTGGATTCCACAGAACCTGTAGACCTGGTAGCCATTGCTTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CCA 90 bp | CACAGACACCCCCAAAAGCAATGGCTACCAGGTCTACAGGTTCTGTaGAATCCAATGCAGCCCAGTCCCTCTGTCCAGTACCGTATACTC | + |
|
Preference number: 5 (lower is better) Translates to: HRHPQKQWLPGLQVL*NPMQPSPSVQYRIL Trigger: GAGTATACGGTACTGGACAGAGGGACTGGGCTGCATTGGATTCCACAGAACCTGTAGACCTGGTAGCCATTGCTTTTGGGGGTGTCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS TCA 90 bp | CCACGAATAATGCCCTGTATCCCCAGTTGGATGACACACCAGTCATaGCCTGGAATTCGCTTACGTCTGGTCTCCCATCCATCCACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PRIMPCIPSWMTHQS*PGIRLRLVSHPSTH Trigger: ATGGGTGGATGGATGGGAGACCAGACGTAAGCGAATTCCAGGTCATGACTGGTGTGTCATCCAACTGGGGATACAGGGCATTATTCGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS GCA 90 bp | AATTTCAATTTGAGTGATGACTCCAGGATGTGCCAATCGGAACACTaGCCACTCACAACCCGGGACCAGGAGAAGGCCATTCTCACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: NFNLSDDSRMCQSEH*PLTTRDQEKAILTS Trigger: GCTAGTGAGAATGGCCTTCTCCTGGTCCCGGGTTGTGAGTGGGCAGTGTTCCGATTGGCACATCCTGGAGTCATCACTCAAATTGAAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CAA 90 bp | TCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACGAACTAGGGAAACCCTaGAGCCGAAGGCGGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: SFYWNHQVFRTLKTVGMYELGKP*SRRRLT Trigger: TGTCAGCCGCCTTCGGCTCAAGGGTTTCCCTAGTTC...GTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS TCA 90 bp | GAAGCAACGACTTCCACTTATGGGCAGGAAGATTCCAATTATGCCTaGTCATGTCTTCCTCTTCCAGTGTGGTCAGGATGCACCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: EATTSTYGQEDSNYA*SCLPLPVWSGCTHP Trigger: TGGATGGGTGCATCCTGACCACACTGGAAGAGGAAGACATGATCAGGCATAATTGGAATCTTCCTGCCCATAAGTGGAAGTCGTTGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS GCA 90 bp | ACTGGAAGCAACGACTTCCACTTATGGGCAGGAAGATTCCAATTATaGCTGATCATGTCTTCCTCTTCCAGTGTGGTCAGGATGCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: TGSNDFHLWAGRFQL*LIMSSSSSVVRMHP Trigger: TGGGTGCATCCTGACCACACTGGAAGAGGAAGACATGATCAGGCATAATTGGAATCTTCCTGCCCATAAGTGGAAGTCGTTGCTTCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CCA 90 bp | CCGGGGGTCTGTCCAGTCTTCTTGCAGTTTCCCAACCATCTGCTATaGACTTGGGTTCACCGACACCTATCATATTATTTGGATGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PGVCPVFLQFPNHLL*TWVHRHLSYYLDVQ Trigger: TTGGACATCCAAATAATATGATAGGTGTCGGTGAACCCAAGTCCATAGCAGATGGTTGGGAAACTGCAAGAAGACTGGACAGACCCCCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CAA 90 bp | ATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTAGAACTAGGGAAACCCTaGAGCCGAAGGCGGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: IVLLEPPGVQNTEDSGYVELGKP*SRRRLT Trigger: TGTCAGCCGCCTTCGGCTCAAGGGTTTCCCTAGTTC...TACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS TCA 90 bp | GGGTCAGGCTGTCCAACAAGTGATTTTGGTTGGGAATTAGCTTGGTaGCTGGAAGCAACGACTTCCACTTATGGGCAGGAAGATTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GSGCPTSDFGWELAW*LEATTSTYGQEDSN Trigger: ATTGGAATCTTCCTGCCCATAAGTGGAAGTCGTTGCTTCCAGTCACCAAGCTAATTCCCAACCAAAATCACTTGTTGGACAGCCTGACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS GCA 90 bp | AAAGTACTTCGTATCAATTTCAATTTGAGTGATGACTCCAGGATGTaGCAATCGGAACACTGCCCACTCACAACCCGGGACCAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KVLRINFNLSDDSRM*QSEHCPLTTRDQEK Trigger: CTTCTCCTGGTCCCGGGTTGTGAGTGGGCAGTGTTCCGATTGGCACATCCTGGAGTCATCACTCAAATTGAAATTGATACGAAGTACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGCATCCATCCACCCATTaGCCAAACTCAGTGTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: GVIVLLEPPGVQNTEDSGHPSTH*PNSVYS Trigger: TGAATACACTGAGTTTGGCAAATGGGTGGATGGATG...CCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGATCACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CAA 90 bp | TGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGGATCCACTTTGCAGCTGTaGGGACAGTTGCCTTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: WNHQVFRTLKTVGMYYGGSTLQL*GQLPLK Trigger: CTTTAAAGGCAACTGTCCCAACAGCTGCAAAGTGGA...TCCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CAA 90 bp | TTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGATGCACCCATCCACTTaGCAGCTGTTGGGACAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLEPPGVQNTEDSGYVLWMHPST*QLLGQL Trigger: CAACTGTCCCAACAGCTGCAAAGTGGATGGGTGCAT...CCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CAA 90 bp | TCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACATGCACCCATCCACTTaGCAGCTGTTGGGACAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SFYWNHQVFRTLKTVGMYMHPST*QLLGQL Trigger: CAACTGTCCCAACAGCTGCAAAGTGGATGGGTGCAT...GTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS GCA 90 bp | TTGACATTGTATCTTCTTCACTCAGGTTCGCTGCTTGGATTGACATaGGAGGAGCATGGTTCCCTGAGAAGTAAGAAATGTCCACGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LTLYLLHSGSLLGLT*EEHGSLRSKKCPRR Trigger: TCGACGTGGACATTTCTTACTTCTCAGGGAACCATGCTCCTCGCATGTCAATCCAAGCAGCGAACCTGAGTGAAGAAGATACAATGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGGATGAGCTCTCAGCTGTTGGGACAGTaGCCTTTAAAGTACTTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: PGVQNTEDSGYVLWWMSSQLLGQ*PLKYFV Trigger: TACGAAGTACTTTAAAGGCAACTGTCCCAACAGCTG...AGAGCTCATCCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CAA 90 bp | GAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGGATGCAGCTGTTGGGACAGTaGCCTTTAAAGTACTTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: EPPGVQNTEDSGYVLWWMQLLGQ*PLKYFV Trigger: TACGAAGTACTTTAAAGGCAACTGTCCCAACAGCTG...CATCCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CCA 90 bp | GTCTGTCCAGTCTTCTTGCAGTTTCCCAACCATCTGCTATGGACTTaGGTTCACCGACACCTATCATATTATTTGGATGTCCAAAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VCPVFLQFPNHLLWT*VHRHLSYYLDVQSV Trigger: CACACTTTGGACATCCAAATAATATGATAGGTGTCGGTGAACCCAAGTCCATAGCAGATGGTTGGGAAACTGCAAGAAGACTGGACAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CAA 90 bp | CCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGGTGGATGAGCCACCTATCATATTATTaGGATGTCCAAAGTGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PPGVQNTEDSGYVLWWMSHLSYY*DVQSVH Trigger: ATGCACACTTTGGACATCCAAATAATATGATAGGTG...GCTCATCCACCATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGCACCTATCATATTATTaGGATGTCCAAAGTGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GVIVLLEPPGVQNTEDSGHLSYY*DVQSVH Trigger: ATGCACACTTTGGACATCCAAATAATATGATAGGTG...CCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGATCACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CAA 90 bp | TTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATGTCTGTCCAGTCTTCTaGCAGTTTCCCAACCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: FYWNHQVFRTLKTVGMYYVCPVF*QFPNHL Trigger: CAGATGGTTGGGAAACTGCAAGAAGACTGGACAGAC...ATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CAA 90 bp | ATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACATCCATCCACCCATTaGCCAAACTCAGTGTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: IVLLEPPGVQNTEDSGYVHPSTH*PNSVYS Trigger: TGAATACACTGAGTTTGGCAAATGGGTGGATGGATG...TACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CAA 90 bp | TTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACTATTCCACTTTGCAGCTGTaGGGACAGTTGCCTTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FYWNHQVFRTLKTVGMYYSTLQL*GQLPLK Trigger: CTTTAAAGGCAACTGTCCCAACAGCTGCAAAGTGGA...ATAGTACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CCA 90 bp | ATCCACCCATTTGCCAAACTCAGTGTATTCATGTTCCTTAAAAGTTaGACTGTCGCTCTTTATGAGATTCTCTGCAGGACCGAAAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: IHPFAKLSVFMFLKS*TVALYEILCRTEKV Trigger: GACTTTTTCGGTCCTGCAGAGAATCTCATAAAGAGCGACAGTCCAACTTTTAAGGAACATGAATACACTGAGTTTGGCAAATGGGTGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CAA 90 bp | GTGATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATCGTATCAATTTCAATTaGAGTGATGACTCCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: VIVLLEPPGVQNTEDSGYRINFN*SDDSRM Trigger: CATCCTGGAGTCATCACTCAAATTGAAATTGATACG...ATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS-3UTR CAA 90 bp | ATCGTTTTATTGGAACCACCAGGTGTTCAGAACACTGAAGACAGTGGGTATGTACGTATCAATTTCAATTaGAGTGATGACTCCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: IVLLEPPGVQNTEDSGYVRINFN*SDDSRM Trigger: CATCCTGGAGTCATCACTCAAATTGAAATTGATACG...TACATACCCACTGTCTTCAGTGTTCTGAACACCTGGTGGTTCCAATAAAACGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CAA 90 bp | TTCTCCCGGAGGGGCCGCAGCAAACAGATGGAACTAGGGAAACCCTaGAGCCGAAGGCGGCTGACACCGCCATCAGGGGCAATGGTAATC | + |
|
Preference number: 6 (lower is better) Translates to: FSRRGRSKQMELGKP*SRRRLTPPSGAMVI Trigger: GATTACCATTGCCCCTGATGGCGGTGTCAGCCGCCTTCGGCTCAAGGGTTTCCCTAGTTCCATCTGTTTGCTGCGGCCCCTCCGGGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS GCA 72 bp | TTGAGTGATGACTCCAGGATGTGCCAATCGGAACACTaGCCACTCACAACCCGGGACCAGGAGAAGGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: LSDDSRMCQSEH*PLTTRDQEKAI Trigger: AATGGCCTTCTCCTGGTCCCGGGTTGTGAGTGGGCAGTGTTCCGATTGGCACATCCTGGAGTCATCACTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS GCA 72 bp | AATGGCTACCAGGTCTACAGGTTCTGTGGAATCCAATaGAGCCCAGTCCCTCTGTCCAGTACCGTATACTCG | + |
|
Preference number: 6 (lower is better) Translates to: NGYQVYRFCGIQ*SPVPLSSTVYS Trigger: CGAGTATACGGTACTGGACAGAGGGACTGGGCTGCATTGGATTCCACAGAACCTGTAGACCTGGTAGCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CCA 72 bp | CTGTATCCCCAGTTGGATGACACACCAGTCATGACCTaGAATTCGCTTACGTCTGGTCTCCCATCCATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LYPQLDDTPVMT*NSLTSGLPSIH Trigger: GTGGATGGATGGGAGACCAGACGTAAGCGAATTCCAGGTCATGACTGGTGTGTCATCCAACTGGGGATACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS TCA 72 bp | AAGCTCCGACATGGGAACCAGGTAATCCCAGGAGTGTaGTTTCAGCTCAGTAACGGCTTCAAACTCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KLRHGNQVIPGV*FQLSNGFKLLR Trigger: CCTGAGGAGTTTGAAGCCGTTACTGAGCTGAAATCACACTCCTGGGATTACCTGGTTCCCATGTCGGAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS GCA 72 bp | TTTCCTCCCACGCACTCAGAGGCCAAATCAATCAGCTaGGTGAAGTCCAGAAATCTGGTCAGTTTTCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FPPTHSEAKSIS*VKSRNLVSFPS Trigger: GGAGGGAAAACTGACCAGATTTCTGGACTTCACGCAGCTGATTGATTTGGCCTCTGAGTGCGTGGGAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS GCA 72 bp | CCAGTCCCTCTGTCCAGTACCGTATACTCGAAGGCGTaGAACACCACCATCTGGGAAGATGTTGAGTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: PVPLSSTVYSKA*NTTIWEDVESY Trigger: ATAAGACTCAACATCTTCCCAGATGGTGGTGTTGCACGCCTTCGAGTATACGGTACTGGACAGAGGGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS GCA 72 bp | CGTATCAATTTCAATTTGAGTGATGACTCCAGGATGTaGCAATCGGAACACTGCCCACTCACAACCCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RINFNLSDDSRM*QSEHCPLTTRD Trigger: GTCCCGGGTTGTGAGTGGGCAGTGTTCCGATTGGCACATCCTGGAGTCATCACTCAAATTGAAATTGATACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CAA 72 bp | CACGTCGATACCACGAATAATGCCCTGTATCCCCAGTaGGATGACACACCAGTCATGACCTGGAATTCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: HVDTTNNALYPQ*DDTPVMTWNSL Trigger: AAGCGAATTCCAGGTCATGACTGGTGTGTCATCCAACTGGGGATACAGGGCATTATTCGTGGTATCGACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CAA 72 bp | TCCTCTTCCAGTGTGGTCAGGATGCACCCATCCACTTaGCAGCTGTTGGGACAGTTGCCTTTAAAGTACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSVVRMHPST*QLLGQLPLKYF Trigger: GAAGTACTTTAAAGGCAACTGTCCCAACAGCTGCAAAGTGGATGGGTGCATCCTGACCACACTGGAAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CAA 90 bp | AGAAATGTCCACGTCGATACCACGAATAATGCCCTGTATCCCCAGTaGGATGACACACCAGTCATGACCTGGAATTCGCTTACGTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RNVHVDTTNNALYPQ*DDTPVMTWNSLTSG Trigger: ACCAGACGTAAGCGAATTCCAGGTCATGACTGGTGTGTCATCCAACTGGGGATACAGGGCATTATTCGTGGTATCGACGTGGACATTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS TCA 72 bp | TGCAGTTCCCATCCTAACTCCCCTTGGTGGGATGTTTaGCATTGTATCTTCTTCACTCAGGTTCGCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CSSHPNSPWWDV*HCIFFTQVRCL Trigger: CAAGCAGCGAACCTGAGTGAAGAAGATACAATGTCAAACATCCCACCAAGGGGAGTTAGGATGGGAACTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS GCA 72 bp | GGGTCTGTCCAGTCTTCTTGCAGTTTCCCAACCATCTaGTATGGACTTGGGTTCACCGACACCTATCATATT | + |
|
Preference number: 6 (lower is better) Translates to: GSVQSSCSFPTI*YGLGFTDTYHI Trigger: AATATGATAGGTGTCGGTGAACCCAAGTCCATAGCAGATGGTTGGGAAACTGCAAGAAGACTGGACAGACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS TCA 72 bp | ACTTCCACTTATGGGCAGGAAGATTCCAATTATGCCTaGTCATGTCTTCCTCTTCCAGTGTGGTCAGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: TSTYGQEDSNYA*SCLPLPVWSGC Trigger: GCATCCTGACCACACTGGAAGAGGAAGACATGATCAGGCATAATTGGAATCTTCCTGCCCATAAGTGGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS GCA 72 bp | AACGACTTCCACTTATGGGCAGGAAGATTCCAATTATaGCTGATCATGTCTTCCTCTTCCAGTGTGGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: NDFHLWAGRFQL*LIMSSSSSVVR Trigger: CCTGACCACACTGGAAGAGGAAGACATGATCAGGCATAATTGGAATCTTCCTGCCCATAAGTGGAAGTCGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CCA 72 bp | TTTGACATTGTATCTTCTTCACTCAGGTTCGCTGCTTaGATTGACATGCGAGGAGCATGGTTCCCTGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FDIVSSSLRFAA*IDMRGAWFPEK Trigger: CTTCTCAGGGAACCATGCTCCTCGCATGTCAATCCAAGCAGCGAACCTGAGTGAAGAAGATACAATGTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CAA 90 bp | GGATGTTTGACATTGTATCTTCTTCACTCAGGTTCGCTGCTTGGATaGACATGCGAGGAGCATGGTTCCCTGAGAAGTAAGAAATGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GCLTLYLLHSGSLLG*TCEEHGSLRSKKCP Trigger: TGGACATTTCTTACTTCTCAGGGAACCATGCTCCTCGCATGTCAATCCAAGCAGCGAACCTGAGTGAAGAAGATACAATGTCAAACATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CAA 90 bp | GGTCTGTCCAGTCTTCTTGCAGTTTCCCAACCATCTGCTATGGACTaGGGTTCACCGACACCTATCATATTATTTGGATGTCCAAAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GLSSLLAVSQPSAMD*GSPTPIILFGCPKC Trigger: ACACTTTGGACATCCAAATAATATGATAGGTGTCGGTGAACCCAAGTCCATAGCAGATGGTTGGGAAACTGCAAGAAGACTGGACAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CAA 90 bp | GCTGTTGGGACAGTTGCCTTTAAAGTACTTCGTATCAATTTCAATTaGAGTGATGACTCCAGGATGTGCCAATCGGAACACTGCCCACTC | + |
|
Preference number: 6 (lower is better) Translates to: AVGTVAFKVLRINFN*SDDSRMCQSEHCPL Trigger: GAGTGGGCAGTGTTCCGATTGGCACATCCTGGAGTCATCACTCAAATTGAAATTGATACGAAGTACTTTAAAGGCAACTGTCCCAACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CAA 90 bp | ATCATGTCTTCCTCTTCCAGTGTGGTCAGGATGCACCCATCCACTTaGCAGCTGTTGGGACAGTTGCCTTTAAAGTACTTCGTATCAATT | + |
|
Preference number: 6 (lower is better) Translates to: IMSSSSSVVRMHPST*QLLGQLPLKYFVSI Trigger: AATTGATACGAAGTACTTTAAAGGCAACTGTCCCAACAGCTGCAAAGTGGATGGGTGCATCCTGACCACACTGGAAGAGGAAGACATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CAA 72 bp | AGTGTGGTCAGGATGCACCCATCCACTTTGCAGCTGTaGGGACAGTTGCCTTTAAAGTACTTCGTATCAATT | + |
|
Preference number: 6 (lower is better) Translates to: SVVRMHPSTLQL*GQLPLKYFVSI Trigger: AATTGATACGAAGTACTTTAAAGGCAACTGTCCCAACAGCTGCAAAGTGGATGGGTGCATCCTGACCACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CCA 72 bp | GTCTTCTTGCAGTTTCCCAACCATCTGCTATGGACTTaGGTTCACCGACACCTATCATATTATTTGGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: VFLQFPNHLLWT*VHRHLSYYLDV Trigger: GACATCCAAATAATATGATAGGTGTCGGTGAACCCAAGTCCATAGCAGATGGTTGGGAAACTGCAAGAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CCA 72 bp | ATTAGCTTGGTGACTGGAAGCAACGACTTCCACTTATaGGCAGGAAGATTCCAATTATGCCTGATCATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ISLVTGSNDFHL*AGRFQLCLIMS Trigger: AGACATGATCAGGCATAATTGGAATCTTCCTGCCCATAAGTGGAAGTCGTTGCTTCCAGTCACCAAGCTAAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CAA 72 bp | AGTCTTCTTGCAGTTTCCCAACCATCTGCTATGGACTaGGGTTCACCGACACCTATCATATTATTTGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: SLLAVSQPSAMD*GSPTPIILFGC Trigger: ACATCCAAATAATATGATAGGTGTCGGTGAACCCAAGTCCATAGCAGATGGTTGGGAAACTGCAAGAAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||
| CDS CCA 72 bp | TTTGCCAAACTCAGTGTATTCATGTTCCTTAAAAGTTaGACTGTCGCTCTTTATGAGATTCTCTGCAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: FAKLSVFMFLKS*TVALYEILCRT Trigger: GGTCCTGCAGAGAATCTCATAAAGAGCGACAGTCCAACTTTTAAGGAACATGAATACACTGAGTTTGGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020965.14 ENSMUST00000110917.2 |
||