Pregenerated sensors for ALKBH8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025899Ensembl transcript IDs: ENSMUST00000053407.13, ENSMUST00000165105.2, ENSMUST00000211933.2, ENSMUST00000212154.2, ENSMUST00000212294.2, ENSMUST00000212358.2, ENSMUST00000212817.2
Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR CCA 90 bp | CTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTTATTCAGAGGCAATaGAGGGATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGC | + |
Preference number: 1 (lower is better) Translates to: LELKQVRKQELIQRQ*RDVTGLLPLACLAC Trigger: GCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTGCCTCTGAATAAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR TCA 90 bp | ACAATGCTCTGGCCACTCCTTGAACCCGTGTGTCTGCCAATGTTTTaGCAGTTCCTGGAACCCATGTGTGTGCCCACTGATGAAGCCCAT | + |
Preference number: 1 (lower is better) Translates to: TMLWPLLEPVCLPMF*QFLEPMCVPTDEAH Trigger: ATGGGCTTCATCAGTGGGCACACACATGGGTTCCAGGAACTGTCAAAACATTGGCAGACACACGGGTTCAAGGAGTGGCCAGAGCATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR GCA 90 bp | TCTCAGGAGACGGGCAAGTTCTTGGAGAGCTTCCACTCTGCGCTCTaGAGTTGCAAAGTGGTGAATGACGGCAATAGAGATGCAAGCATC | + |
Preference number: 1 (lower is better) Translates to: SQETGKFLESFHSAL*SCKVVNDGNRDASI Trigger: GATGCTTGCATCTCTATTGCCGTCATTCACCACTTTGCAACTGCAGAGCGCAGAGTGGAAGCTCTCCAAGAACTTGCCCGTCTCCTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR GCA 90 bp | CAATGGAGGGATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTaGTTTCATATAAAACCCAAGACTGCCAGTCCAGGGATGGCACCA | + |
Preference number: 1 (lower is better) Translates to: QWRDVTGLLPLACLA*FHIKPKTASPGMAP Trigger: TGGTGCCATCCCTGGACTGGCAGTCTTGGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR GCA 90 bp | AATAGAGTTACACAATGCTCTGGCCACTCCTTGAACCCGTGTGTCTaGCAATGTTTTGACAGTTCCTGGAACCCATGTGTGTGCCCACTG | + |
Preference number: 1 (lower is better) Translates to: NRVTQCSGHSLNPCV*QCFDSSWNPCVCPL Trigger: CAGTGGGCACACACATGGGTTCCAGGAACTGTCAAAACATTGGCAGACACACGGGTTCAAGGAGTGGCCAGAGCATTGTGTAACTCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR GCA 90 bp | ATTCAGAGGCAATGGAGGGATGTTACTGGCTTGCTTCCCCTGGCTTaGTTAGCTTGCTTTCATATAAAACCCAAGACTGCCAGTCCAGGG | + |
Preference number: 1 (lower is better) Translates to: IQRQWRDVTGLLPLA*LACFHIKPKTASPG Trigger: CCCTGGACTGGCAGTCTTGGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTGCCTCTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR TCA 90 bp | GAGAATCAGGGTTCCGGTACTCAGTTGGGCAAGGAGTCAGCAGGGTaGCAAACAGCAGAGAAAGTGTTGGATCTGAATGTAATGTCTCAA | + |
Preference number: 1 (lower is better) Translates to: ENQGSGTQLGKESAG*QTAEKVLDLNVMSQ Trigger: TTGAGACATTACATTCAGATCCAACACTTTCTCTGCTGTTTGTCACCCTGCTGACTCCTTGCCCAACTGAGTACCGGAACCCTGATTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR GCA 90 bp | TGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTaGTCTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTC | + |
Preference number: 1 (lower is better) Translates to: CKLGRKGFIQLTLPY*SSSPRKSGLELKQV Trigger: GACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAAGAGCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CCA 90 bp | AGCTTACACTTCCATATTGCTCTTCATCACCAAGGAAGTCAGGACTaGAACTCAAGCAGGTCAGGAAGCAGGAGCTTATTCAGAGGCAAT | + |
Preference number: 1 (lower is better) Translates to: SLHFHIALHHQGSQD*NSSRSGSRSLFRGN Trigger: ATTGCCTCTGAATAAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAAGAGCAATATGGAAGTGTAAGCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CCA 90 bp | ACGATGAAACACAGGACTTGGGTCAGGACATCCTGCTACACCAGATaGTTCAATAGCTTTGTCTTTACCAGGGTTTCTTTTGAGGTGCCA | + |
Preference number: 1 (lower is better) Translates to: TMKHRTWVRTSCYTR*FNSFVFTRVSFEVP Trigger: TGGCACCTCAAAAGAAACCCTGGTAAAGACAAAGCTATTGAACCATCTGGTGTAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCATCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR TCA 90 bp | TCAGGAACTCTACTATGCGTGGCCATGGGCTATGTCTTGTGCTGCTaGAGTGACTTGCAATCTCATTGTACACTTGATGGACATGCTTTT | + |
Preference number: 1 (lower is better) Translates to: SGTLLCVAMGYVLCC*SDLQSHCTLDGHAF Trigger: AAAAGCATGTCCATCAAGTGTACAATGAGATTGCAAGTCACTTCAGCAGCACAAGACATAGCCCATGGCCACGCATAGTAGAGTTCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR TCA 90 bp | GAGTTGACAGACAATGCTGGGTCTTCATTGACCCCCTCAGGCGTTTaGTTTACTAGAAATTCTTCCGTAGATGTGGCACTGTTTAGCTCA | + |
Preference number: 1 (lower is better) Translates to: ELTDNAGSSLTPSGV*FTRNSSVDVALFSS Trigger: TGAGCTAAACAGTGCCACATCTACGGAAGAATTTCTAGTAAATCAAACGCCTGAGGGGGTCAATGAAGACCCAGCATTGTCTGTCAACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR GCA 90 bp | CCTCAGGAAGACCCCCAGGTAAGGGCTTGTCTTTATCCACAGTGTTaGTCTCATAGTGAAATTCATAGCCAAAATGTTTCACTCTTCTGT | + |
Preference number: 1 (lower is better) Translates to: PQEDPQVRACLYPQC*SHSEIHSQNVSLFC Trigger: ACAGAAGAGTGAAACATTTTGGCTATGAATTTCACTATGAGAGCAACACTGTGGATAAAGACAAGCCCTTACCTGGGGGTCTTCCTGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212817.2 |
||
3UTR CCA 90 bp | AAGTGGATATATATAGGTTCTGGGGACTCAGGGTGTCAGGATTGGTaGCACATTCCTGTACCAATTAAGCCATTTCACTGGTCTACATGT | + |
Preference number: 1 (lower is better) Translates to: KWIYIGSGDSGCQDW*HIPVPIKPFHWSTC Trigger: ACATGTAGACCAGTGAAATGGCTTAATTGGTACAGGAATGTGCCACCAATCCTGACACCCTGAGTCCCCAGAACCTATATATATCCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CCA 90 bp | AACAAGACAAATTTACTTAAGGTTAGACATAGCTATGAAGGTGTGTaGGAAGTCCTCAAGGGAGGCTCACAGCTGCCACCAGATTATGAC | + |
Preference number: 1 (lower is better) Translates to: NKTNLLKVRHSYEGV*EVLKGGSQLPPDYD Trigger: GTCATAATCTGGTGGCAGCTGTGAGCCTCCCTTGAGGACTTCCCACACACCTTCATAGCTATGTCTAACCTTAAGTAAATTTGTCTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR TCA 90 bp | AGGCCTTGCAGGGTCAATGGACATATTTCTTCCTATACTTTTGACTaGCACCCCAGGATGCCCTTTCAAAGGAGAAGAAATGATGGAAAT | + |
Preference number: 1 (lower is better) Translates to: RPCRVNGHISSYTFD*HPRMPFQRRRNDGN Trigger: ATTTCCATCATTTCTTCTCCTTTGAAAGGGCATCCTGGGGTGTCAGTCAAAAGTATAGGAAGAAATATGTCCATTGACCCTGCAAGGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR TCA 90 bp | ATCGTAATAGCTCTGCAGAATGCTAACATCACCCACAGCCTGGCATaGAGCTTCCAATTCTCCATCACAGAAAACATGGTAATAACGATG | + |
Preference number: 1 (lower is better) Translates to: IVIALQNANITHSLA*SFQFSITENMVITM Trigger: CATCGTTATTACCATGTTTTCTGTGATGGAGAATTGGAAGCTTCATGCCAGGCTGTGGGTGATGTTAGCATTCTGCAGAGCTATTACGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR GCA 90 bp | AAACTCCGACGAGGTAACATAACTTGTACTGTGACACCCTCTGGATaGTTGAAATCCATAACAATCGCTGACCCCAAACTGAGAGAAATA | + |
Preference number: 1 (lower is better) Translates to: KLRRGNITCTVTPSG*LKSITIADPKLREI Trigger: TATTTCTCTCAGTTTGGGGTCAGCGATTGTTATGGATTTCAAGCATCCAGAGGGTGTCACAGTACAAGTTATGTTACCTCGTCGGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212358.2 ENSMUST00000212817.2 |
||
3UTR GCA 90 bp | AACATGGTAATAACGATGAAACACAGGACTTGGGTCAGGACATCCTaGTACACCAGATGGTTCAATAGCTTTGTCTTTACCAGGGTTTCT | + |
Preference number: 1 (lower is better) Translates to: NMVITMKHRTWVRTS*YTRWFNSFVFTRVS Trigger: AGAAACCCTGGTAAAGACAAAGCTATTGAACCATCTGGTGTAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCATCGTTATTACCATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR CCA 90 bp | TTCTCCATCACAGAAAACATGGTAATAACGATGAAACACAGGACTTaGGTCAGGACATCCTGCTACACCAGATGGTTCAATAGCTTTGTC | + |
Preference number: 1 (lower is better) Translates to: FSITENMVITMKHRT*VRTSCYTRWFNSFV Trigger: GACAAAGCTATTGAACCATCTGGTGTAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCATCGTTATTACCATGTTTTCTGTGATGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR TCA 90 bp | TACTGCAAACCTCAGGAAGACCTTATTTTTCATGTACTTGTGTCTTaGCTGACCCATCACATGAGCTTAGATATGGAGACTTTCCACTGG | + |
Preference number: 1 (lower is better) Translates to: YCKPQEDLIFHVLVS*LTHHMSLDMETFHW Trigger: CCAGTGGAAAGTCTCCATATCTAAGCTCATGTGATGGGTCAGTCAAGACACAAGTACATGAAAAATAAGGTCTTCCTGAGGTTTGCAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR TCA 90 bp | CAAGGTTCTGGCTACGATCACACCCAATCATATATAAGTCCTTGTTaGTGCCAAGGTATTTTCCATTTCCACATCCGATATCTGCCACTA | + |
Preference number: 1 (lower is better) Translates to: QGSGYDHTQSYISPC*CQGIFHFHIRYLPL Trigger: TAGTGGCAGATATCGGATGTGGAAATGGAAAATACCTTGGCATCAACAAGGACTTATATATGATTGGGTGTGATCGTAGCCAGAACCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR CCA 90 bp | GAGCGAGGGGTTCCTCTCGGAGTCTTTCATTATGATCAGTCAACGTaGCTAACTTGCTTACTTGGAAACTTGAATTCACAAGAACAATAT | + |
Preference number: 1 (lower is better) Translates to: ERGVPLGVFHYDQST*LTCLLGNLNSQEQY Trigger: ATATTGTTCTTGTGAATTCAAGTTTCCAAGTAAGCAAGTTAGCCACGTTGACTGATCATAATGAAAGACTCCGAGAGGAACCCCTCGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CCA 90 bp | TACAGCGTAAATGTTCCACAACCTCCCCAAATAGCACCACCAACCTaGGACCAAGTAGTTAAATACACAAACTGTGGGTCATTTTTCATT | + |
Preference number: 1 (lower is better) Translates to: YSVNVPQPPQIAPPT*DQVVKYTNCGSFFI Trigger: AATGAAAAATGACCCACAGTTTGTGTATTTAACTACTTGGTCCCAGGTTGGTGGTGCTATTTGGGGAGGTTGTGGAACATTTACGCTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR TCA 90 bp | TTGTACTGTGACACCCTCTGGATGCTTGAAATCCATAACAATCGCTaGCCCCAAACTGAGAGAAATAATCTCATCTTCAAATGCAGAATG | + |
Preference number: 1 (lower is better) Translates to: LYCDTLWMLEIHNNR*PQTERNNLIFKCRM Trigger: CATTCTGCATTTGAAGATGAGATTATTTCTCTCAGTTTGGGGTCAGCGATTGTTATGGATTTCAAGCATCCAGAGGGTGTCACAGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212358.2 ENSMUST00000212817.2 |
||
3UTR GCA 90 bp | AAAGTCAAGTCTCCAATGTCACTGGTGATTATTCCCCCTTTAAATTaGTCAGACGCTTGGACGGTATCAAATTTTCGAGGTGTAATTCCA | + |
Preference number: 1 (lower is better) Translates to: KVKSPMSLVIIPPLN*SDAWTVSNFRGVIP Trigger: TGGAATTACACCTCGAAAATTTGATACCGTCCAAGCGTCTGAGCAATTTAAAGGGGGAATAATCACCAGTGACATTGGAGACTTGACTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR TCA 90 bp | TATATGTCAAATCTTTCCTTGGAGGTTCTTATAATAAAACGATACTaGAGGAAAGCACACAAATCCGTTCACCGACTGATGCAAGGACAA | + |
Preference number: 1 (lower is better) Translates to: YMSNLSLEVLIIKRY*RKAHKSVHRLMQGQ Trigger: TTGTCCTTGCATCAGTCGGTGAACGGATTTGTGTGCTTTCCTTCAGTATCGTTTTATTATAAGAACCTCCAAGGAAAGATTTGACATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CAA 90 bp | GCAATGGAGGGATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTaGCTTTCATATAAAACCCAAGACTGCCAGTCCAGGGATGGCACC | + |
Preference number: 2 (lower is better) Translates to: AMEGCYWLASPGLLS*LSYKTQDCQSRDGT Trigger: GGTGCCATCCCTGGACTGGCAGTCTTGGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CAA 90 bp | GGACTTGGGTCAGGACATCCTGCTACACCAGATGGTTCAATAGCTTaGTCTTTACCAGGGTTTCTTTTGAGGTGCCAGGGAACCAGCACA | + |
Preference number: 2 (lower is better) Translates to: GLGSGHPATPDGSIA*SLPGFLLRCQGTST Trigger: TGTGCTGGTTCCCTGGCACCTCAAAAGAAACCCTGGTAAAGACAAAGCTATTGAACCATCTGGTGTAGCAGGATGTCCTGACCCAAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR CAA 90 bp | ATGTATTTAGCTGGACATGGTGGCACTTGCCTTCAATTCCAGCACTaGGCAGAGACAGGCAGGTTTCTGTGGGTTCAAGAACAGCCTGTT | + |
Preference number: 2 (lower is better) Translates to: MYLAGHGGTCLQFQH*AETGRFLWVQEQPV Trigger: AACAGGCTGTTCTTGAACCCACAGAAACCTGCCTGTCTCTGCCAAGTGCTGGAATTGAAGGCAAGTGCCACCATGTCCAGCTAAATACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CAA 90 bp | TATTCAGAGGCAATGGAGGGATGTTACTGGCTTGCTTCCCCTGGCTaGCTTAGCTTGCTTTCATATAAAACCCAAGACTGCCAGTCCAGG | + |
Preference number: 2 (lower is better) Translates to: YSEAMEGCYWLASPG*LSLLSYKTQDCQSR Trigger: CCTGGACTGGCAGTCTTGGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTGCCTCTGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR-3UTR CCA 90 bp | ATGCAAGCATCACAAGACCCACTTCTGACAGGAACAGCCAGCGCATCGCAGACTTACTGTGACACCCTCTaGATGCTTGAAATCCATAAC | + |
Preference number: 2 (lower is better) Translates to: MQASQDPLLTGTASASQTYCDTL*MLEIHN Trigger: GTTATGGATTTCAAGCATCCAGAGGGTGTCACAGTA...AGTCTGCGATGCGCTGGCTGTTCCTGTCAGAAGTGGGTCTTGTGATGCTTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR-3UTR TCA 90 bp | ACGATGAAACACAGGACTTGGGTCAGGACATCCTGCTACACCAGATGGTTCAATCATGTACTTGTGTCTTaGCTGACCCATCACATGAGC | + |
Preference number: 2 (lower is better) Translates to: TMKHRTWVRTSCYTRWFNHVLVS*LTHHMS Trigger: GCTCATGTGATGGGTCAGTCAAGACACAAGTACATG...ATTGAACCATCTGGTGTAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCATCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR-3UTR CCA 90 bp | CCAAGATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTGCATGGAGGGATGTTACTaGCTTGCTTCCCCTGGCTTG | + |
Preference number: 2 (lower is better) Translates to: PRCKLGRKGFIQLTLPYCMEGCY*LASPGL Trigger: CAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCAT...GCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCATCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR-3UTR TCA 90 bp | GGAACTTTCCTTGACTTATACTCTTCTTCCTTGGTGATACTACTGGAGTTGACACACAAGACCCACTTCTaGCAGGAACAGCCAGCGCAT | + |
Preference number: 2 (lower is better) Translates to: GTFLDLYSSSLVILLELTHKTHF*QEQPAH Trigger: ATGCGCTGGCTGTTCCTGTCAGAAGTGGGTCTTGTG...TGTCAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAAGTCAAGGAAAGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR-3UTR GCA 90 bp | GCTTTCAGGAACTCTACTATGCGTGGCCATGGGCTATGTCTTGTGCTGCTGAAGACAACTTCTCCAAAATaGTACTGCAAACCTCAGGAA | + |
Preference number: 2 (lower is better) Translates to: AFRNSTMRGHGLCLVLLKTTSPK*YCKPQE Trigger: TTCCTGAGGTTTGCAGTAGCATTTTGGAGAAGTTGT...CTTCAGCAGCACAAGACATAGCCCATGGCCACGCATAGTAGAGTTCCTGAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR-3UTR GCA 90 bp | TCCAATGCTTCTTTACTGCTCTCTGTAAGGGATGGAGGTGTGGCCTTCCTTTGTTGCGCATTCCCCTCTTaGTTAAAGTCAAGTCTCCAA | + |
Preference number: 2 (lower is better) Translates to: SNASLLLSVRDGGVAFLCCAFPS*LKSSLQ Trigger: TTGGAGACTTGACTTTAAGCAAGAGGGGAATGCGCA...ACAAAGGAAGGCCACACCTCCATCCCTTACAGAGAGCAGTAAAGAAGCATTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR-3UTR CCA 90 bp | GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATAAAACCCACAGGCAGGTTTCTGTaGGTTCAAGAACAGCCTGTT | + |
Preference number: 2 (lower is better) Translates to: DVTGLLPLACLACFHIKPTGRFL*VQEQPV Trigger: AACAGGCTGTTCTTGAACCCACAGAAACCTGCCTGT...GGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CAA 90 bp | ATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATaGCTCTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGT | + |
Preference number: 2 (lower is better) Translates to: MQVGEERVYSAYTSI*LFITKEVRTGTQAG Trigger: ACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAAGAGCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR-3UTR TCA 90 bp | TGTTTTGACAGTTCCTGGAACCCATGTGTGTGCCCACTGATGAAGCCCATTGCCTGCTTTTGGTTTCACTaGCTAGATAAAAATGCAACC | + |
Preference number: 2 (lower is better) Translates to: CFDSSWNPCVCPLMKPIACFWFH*LDKNAT Trigger: GGTTGCATTTTTATCTAGTCAGTGAAACCAAAAGCA...GGCAATGGGCTTCATCAGTGGGCACACACATGGGTTCCAGGAACTGTCAAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR-3UTR CCA 90 bp | CCCTTCTTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTTGTTACTGAGAATCTTCTaGCTAAAGTGTTTCTGGGCA | + |
Preference number: 2 (lower is better) Translates to: PFLKVSSLGTSFLFPAGLLLRIF*LKCFWA Trigger: TGCCCAGAAACACTTTAGCCAGAAGATTCTCAGTAA...CAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
3UTR CAA 90 bp | CTCCGACGAGGTAACATAACTTGTACTGTGACACCCTCTGGATGCTaGAAATCCATAACAATCGCTGACCCCAAACTGAGAGAAATAATC | + |
Preference number: 2 (lower is better) Translates to: LRRGNITCTVTPSGC*KSITIADPKLREII Trigger: GATTATTTCTCTCAGTTTGGGGTCAGCGATTGTTATGGATTTCAAGCATCCAGAGGGTGTCACAGTACAAGTTATGTTACCTCGTCGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212358.2 ENSMUST00000212817.2 |
||
3UTR-3UTR TCA 90 bp | GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATAAAACCCAGAAACAGCCAACTGTaGCTGCAAGAACAATGTTTG | + |
Preference number: 2 (lower is better) Translates to: DVTGLLPLACLACFHIKPRNSQL*LQEQCL Trigger: CAAACATTGTTCTTGCAGTCACAGTTGGCTGTTTCT...GGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR-3UTR TCA 90 bp | GGTGGCACATTCCTGTACCAATTAAGCCATTTCACTGGTCTACATGTTCCTTTAACATTCCTAATGCTGTaGCCCTTCAATGTTGTGGCG | + |
Preference number: 2 (lower is better) Translates to: GGTFLYQLSHFTGLHVPLTFLML*PFNVVA Trigger: CGCCACAACATTGAAGGGTCACAGCATTAGGAATGT...TAAAGGAACATGTAGACCAGTGAAATGGCTTAATTGGTACAGGAATGTGCCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR-3UTR GCA 90 bp | CACCTGCACCAGACTCTTTCCTTGTACCCCTCCCATACCCATTTCTTGAGAATAACAGCCAACTGTGACTaGAAGAACAATGTTTGGTTT | + |
Preference number: 2 (lower is better) Translates to: HLHQTLSLYPSHTHFLRITANCD*KNNVWF Trigger: AAACCAAACATTGTTCTTGCAGTCACAGTTGGCTGT...TATTCTCAAGAAATGGGTATGGGAGGGGTACAAGGAAAGAGTCTGGTGCAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR-3UTR GCA 90 bp | AAACTCCGACGAGGTAACATAACTTGTACTGTGACACCCTCTGGATGCTTGAAACATTTCATTGTCCGATaGAGATTCAGACTGGGCACA | + |
Preference number: 2 (lower is better) Translates to: KLRRGNITCTVTPSGCLKHFIVR*RFRLGT Trigger: TGTGCCCAGTCTGAATCTGCATCGGACAATGAAATG...TTTCAAGCATCCAGAGGGTGTCACAGTACAAGTTATGTTACCTCGTCGGAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212817.2 |
||
3UTR-3UTR GCA 90 bp | GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATAAAACCCACTGATGAAGCCCATTaGCAGGTGTTTGTGATATTG | + |
Preference number: 2 (lower is better) Translates to: DVTGLLPLACLACFHIKPTDEAH*QVFVIL Trigger: CAATATCACAAACACCTGGCAATGGGCTTCATCAGT...GGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CAA 90 bp | CATTTAGGCCTTGCAGGGTCAATGGACATATTTCTTCCTATACTTTaGACTGACACCCCAGGATGCCCTTTCAAAGGAGAAGAAATGATG | + |
Preference number: 2 (lower is better) Translates to: HLGLAGSMDIFLPIL*TDTPGCPFKGEEMM Trigger: CATCATTTCTTCTCCTTTGAAAGGGCATCCTGGGGTGTCAGTCAAAAGTATAGGAAGAAATATGTCCATTGACCCTGCAAGGCCTAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR-3UTR CCA 90 bp | TTTGACCCCCAAAGGGGTCATGACCTACAGGTTGAGAACTGCTGCTTTAATATAGTTCTTGTTTCCTGCTaGTTTGTCTGTGTTTGTGGT | + |
Preference number: 2 (lower is better) Translates to: FDPQRGHDLQVENCCFNIVLVSC*FVCVCG Trigger: ACCACAAACACAGACAAACCAGCAGGAAACAAGAAC...TATATTAAAGCAGCAGTTCTCAACCTGTAGGTCATGACCCCTTTGGGGGTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CAA 90 bp | TTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTaGTCTGTGTTTGTGGTAATCAGTACTAAATCTAGAGCTTCAATG | + |
Preference number: 2 (lower is better) Translates to: LKVSSLGTSFLFPAG*SVFVVISTKSRASM Trigger: CATTGAAGCTCTAGATTTAGTACTGATTACCACAAACACAGACAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
3UTR CAA 90 bp | CTACTGCAAACCTCAGGAAGACCTTATTTTTCATGTACTTGTGTCTaGACTGACCCATCACATGAGCTTAGATATGGAGACTTTCCACTG | + |
Preference number: 2 (lower is better) Translates to: LLQTSGRPYFSCTCV*TDPSHELRYGDFPL Trigger: CAGTGGAAAGTCTCCATATCTAAGCTCATGTGATGGGTCAGTCAAGACACAAGTACATGAAAAATAAGGTCTTCCTGAGGTTTGCAGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR CAA 90 bp | TCCAATGTCACTGGTGATTATTCCCCCTTTAAATTGCTCAGACGCTaGGACGGTATCAAATTTTCGAGGTGTAATTCCATGAGTCCAAAG | + |
Preference number: 2 (lower is better) Translates to: SNVTGDYSPFKLLRR*DGIKFSRCNSMSPK Trigger: CTTTGGACTCATGGAATTACACCTCGAAAATTTGATACCGTCCAAGCGTCTGAGCAATTTAAAGGGGGAATAATCACCAGTGACATTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR CAA 90 bp | GGGAGTTCAGAATTAGGAACTTTCCTTGACTTATACTCTTCTTCCTaGGTGATACTACTGGAGTTGACAGACAATGCTGGGTCTTCATTG | + |
Preference number: 2 (lower is better) Translates to: GSSELGTFLDLYSSS*VILLELTDNAGSSL Trigger: CAATGAAGACCCAGCATTGTCTGTCAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAAGTCAAGGAAAGTTCCTAATTCTGAACTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR-3UTR GCA 90 bp | GAGAGAAATAATCTCATCTTCAAATGCAGAATGCGTGTCAATATGGGCAGGAATTCTCCAAAATGCTACTaGAAACCTCAGGAAGACCCC | + |
Preference number: 2 (lower is better) Translates to: ERNNLIFKCRMRVNMGRNSPKCY*KPQEDP Trigger: GGGGTCTTCCTGAGGTTTGCAGTAGCATTTTGGAGA...ATTCCTGCCCATATTGACACGCATTCTGCATTTGAAGATGAGATTATTTCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212817.2 |
||
3UTR-3UTR CCA 90 bp | CCAAGATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTGCTGTGATATTGTTTGCTaGGGAAGAGTGGGAAAATCT | + |
Preference number: 2 (lower is better) Translates to: PRCKLGRKGFIQLTLPYCCDIVC*GRVGKS Trigger: AGATTTTCCCACTCTTCCCCAGCAAACAATATCACA...GCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCATCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CAA 90 bp | TCAAAGGTGTGCGCCACCACACCCAGCTCTTCAGATACTTCCTTATaGTCCAGGAATATTCACTTCATTAAAATCTCACATAATTGCTTC | + |
Preference number: 2 (lower is better) Translates to: SKVCATTPSSSDTSL*SRNIHFIKISHNCF Trigger: GAAGCAATTATGTGAGATTTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGTGGTGGCGCACACCTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
3UTR-3UTR TCA 90 bp | GGAACTTTCCTTGACTTATACTCTTCTTCCTTGGTGATACTACTGGAGTTGACACGAGGTGTAATTCCATaGGTCCAAAGGTATCTAGAT | + |
Preference number: 2 (lower is better) Translates to: GTFLDLYSSSLVILLELTRGVIP*VQRYLD Trigger: ATCTAGATACCTTTGGACTCATGGAATTACACCTCG...TGTCAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAAGTCAAGGAAAGTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR-3UTR GCA 90 bp | GGAACTTTCCTTGACTTATACTCTTCTTCCTTGGTGATACTACTGGAGTTGACATCTCCAAAATGCTACTaGAAACCTCAGGAAGACCTT | + |
Preference number: 2 (lower is better) Translates to: GTFLDLYSSSLVILLELTSPKCY*KPQEDL Trigger: AAGGTCTTCCTGAGGTTTGCAGTAGCATTTTGGAGA...TGTCAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAAGTCAAGGAAAGTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR-3UTR GCA 90 bp | GTAGATGTGGCACTGTTTAGCTCATCTTTATCTCCTTGGCTAATTCTCTTTCCTGCTGCTGAAGTGACTTaGAATCTCATTGTACACTTG | + |
Preference number: 2 (lower is better) Translates to: VDVALFSSSLSPWLILFPAAEVT*NLIVHL Trigger: CAAGTGTACAATGAGATTGCAAGTCACTTCAGCAGC...AGGAAAGAGAATTAGCCAAGGAGATAAAGATGAGCTAAACAGTGCCACATCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR-3UTR CCA 90 bp | GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATAAAACCCGCTAACTTGCTTACTTaGAAACTTGAATTCACAAGA | + |
Preference number: 2 (lower is better) Translates to: DVTGLLPLACLACFHIKPANLLT*KLEFTR Trigger: TCTTGTGAATTCAAGTTTCCAAGTAAGCAAGTTAGC...GGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR-3UTR GCA 90 bp | GAAATAATCTCATCTTCAAATGCAGAATGCGTGTCAATATGGGCAGGAATTCCTACAACTTCTCCAAAATaGTACTGCAAACCTCAGGAA | + |
Preference number: 2 (lower is better) Translates to: EIISSSNAECVSIWAGIPTTSPK*YCKPQE Trigger: TTCCTGAGGTTTGCAGTAGCATTTTGGAGAAGTTGT...AGGAATTCCTGCCCATATTGACACGCATTCTGCATTTGAAGATGAGATTATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212817.2 |
||
3UTR-3UTR CCA 90 bp | TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTATTACTGAGAATCTTCTaGCTAAAGTGTTTCTGGGCA | + |
Preference number: 2 (lower is better) Translates to: SIHLHPNLFYLFTTSLLVLLRIF*LKCFWA Trigger: TGCCCAGAAACACTTTAGCCAGAAGATTCTCAGTAA...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
3UTR CCA 72 bp | CCCTTTCCTCACGAGGTTGACTCCTCTACCCCTGTGTaGGATATGAGTTGTCCCCAGAGCTCTGGCTTTCCC | + |
Preference number: 3 (lower is better) Translates to: PFPHEVDSSTPV*DMSCPQSSGFP Trigger: GGGAAAGCCAGAGCTCTGGGGACAACTCATATCCCACACAGGGGTAGAGGAGTCAACCTCGTGAGGAAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR GCA 72 bp | GGCTTGCTTAGCTTGCTTTCATATAAAACCCAAGACTaGCAGTCCAGGGATGGCACCACCCCCTGCCAGTCC | + |
Preference number: 3 (lower is better) Translates to: GLLSLLSYKTQD*QSRDGTTPCQS Trigger: GGACTGGCAGGGGGTGGTGCCATCCCTGGACTGGCAGTCTTGGGTTTTATATGAAAGCAAGCTAAGCAAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CCA 72 bp | AAGCAGGTCAGGAAGCAGGAGCTTATTCAGAGGCAATaGAGGGATGTTACTGGCTTGCTTCCCCTGGCTTGC | + |
Preference number: 3 (lower is better) Translates to: KQVRKQELIQRQ*RDVTGLLPLAC Trigger: GCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTGCCTCTGAATAAGCTCCTGCTTCCTGACCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR TCA 72 bp | TGGCCACTCCTTGAACCCGTGTGTCTGCCAATGTTTTaGCAGTTCCTGGAACCCATGTGTGTGCCCACTGAT | + |
Preference number: 3 (lower is better) Translates to: WPLLEPVCLPMF*QFLEPMCVPTD Trigger: ATCAGTGGGCACACACATGGGTTCCAGGAACTGTCAAAACATTGGCAGACACACGGGTTCAAGGAGTGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR-3UTR CAA 90 bp | CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATCAGATACTTCCTTATaGTCCAGGAATATTCACTTC | + |
Preference number: 3 (lower is better) Translates to: QAGLELRNSPASASRVLGSDTSL*SRNIHF Trigger: GAAGTGAATATTCCTGGACAATAAGGAAGTATCTGA...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
3UTR-3UTR CAA 90 bp | CACCTGCACCAGACTCTTTCCTTGTACCCCTCCCATACCCATTTCTTGAGAATAACCAGCCATCCCTTCTaGAAGGTCAGCTCCCTAGGT | + |
Preference number: 3 (lower is better) Translates to: HLHQTLSLYPSHTHFLRITSHPF*KVSSLG Trigger: ACCTAGGGAGCTGACCTTCAAGAAGGGATGGCTGGT...TATTCTCAAGAAATGGGTATGGGAGGGGTACAAGGAAAGAGTCTGGTGCAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR GCA 72 bp | ACACAATGCTCTGGCCACTCCTTGAACCCGTGTGTCTaGCAATGTTTTGACAGTTCCTGGAACCCATGTGTG | + |
Preference number: 3 (lower is better) Translates to: TQCSGHSLNPCV*QCFDSSWNPCV Trigger: CACACATGGGTTCCAGGAACTGTCAAAACATTGGCAGACACACGGGTTCAAGGAGTGGCCAGAGCATTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR GCA 72 bp | TGCCTCAGAATGGCGTCCAAGCTTTTGGGCCAGTCATaGAGTTTCCACAGGAATAGGTGTGGCACAGTTAGA | + |
Preference number: 3 (lower is better) Translates to: CLRMASKLLGQS*SFHRNRCGTVR Trigger: TCTAACTGTGCCACACCTATTCCTGTGGAAACTGCATGACTGGCCCAAAAGCTTGGACGCCATTCTGAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CCA 72 bp | GCAGGAGCTTATTCAGAGGCAATGGAGGGATGTTACTaGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCA | + |
Preference number: 3 (lower is better) Translates to: AGAYSEAMEGCY*LASPGLLSLLS Trigger: TGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTGCCTCTGAATAAGCTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR-3UTR CAA 90 bp | ATGCAAGCATCACAAGACCCACTTCTGACAGGAACAGCCAGCGCATCGCAGACTACACCCTCTGGATGCTaGAAATCCATAACAATCGCT | + |
Preference number: 3 (lower is better) Translates to: MQASQDPLLTGTASASQTTPSGC*KSITIA Trigger: AGCGATTGTTATGGATTTCAAGCATCCAGAGGGTGT...AGTCTGCGATGCGCTGGCTGTTCCTGTCAGAAGTGGGTCTTGTGATGCTTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR TCA 72 bp | GGTTCCGGTACTCAGTTGGGCAAGGAGTCAGCAGGGTaGCAAACAGCAGAGAAAGTGTTGGATCTGAATGTA | + |
Preference number: 3 (lower is better) Translates to: GSGTQLGKESAG*QTAEKVLDLNV Trigger: TACATTCAGATCCAACACTTTCTCTGCTGTTTGTCACCCTGCTGACTCCTTGCCCAACTGAGTACCGGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR TCA 72 bp | AGAGCTTCCACTCTGCGCTCTGCAGTTGCAAAGTGGTaGATGACGGCAATAGAGATGCAAGCATCACAAGAC | + |
Preference number: 3 (lower is better) Translates to: RASTLRSAVAKW*MTAIEMQASQD Trigger: GTCTTGTGATGCTTGCATCTCTATTGCCGTCATTCACCACTTTGCAACTGCAGAGCGCAGAGTGGAAGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR GCA 72 bp | CACACACACACACACACACACTTACAAACTTCAGCCTaGTGTGATGGTACATGTAACCCCAGGACTGGAGAG | + |
Preference number: 3 (lower is better) Translates to: HTHTHTHLQTSA*CDGTCNPRTGE Trigger: CTCTCCAGTCCTGGGGTTACATGTACCATCACAGCAGGCTGAAGTTTGTAAGTGTGTGTGTGTGTGTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR GCA 72 bp | GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTaGTTTCATATAAAACCCAAGACTGCCAGTCCAGGG | + |
Preference number: 3 (lower is better) Translates to: DVTGLLPLACLA*FHIKPKTASPG Trigger: CCCTGGACTGGCAGTCTTGGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR GCA 72 bp | AAGTTCTTGGAGAGCTTCCACTCTGCGCTCTGCAGTTaGAAAGTGGTGAATGACGGCAATAGAGATGCAAGC | + |
Preference number: 3 (lower is better) Translates to: KFLESFHSALCS*KVVNDGNRDAS Trigger: GCTTGCATCTCTATTGCCGTCATTCACCACTTTGCAACTGCAGAGCGCAGAGTGGAAGCTCTCCAAGAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR-3UTR CAA 90 bp | CACCTGCACCAGACTCTTTCCTTGTACCCCTCCCATACCCATTTCTTGAGAATACTTCAATTCCAGCACTaGGCAGAGACAGGCAGGTTT | + |
Preference number: 3 (lower is better) Translates to: HLHQTLSLYPSHTHFLRILQFQH*AETGRF Trigger: AAACCTGCCTGTCTCTGCCAAGTGCTGGAATTGAAG...TATTCTCAAGAAATGGGTATGGGAGGGGTACAAGGAAAGAGTCTGGTGCAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR GCA 72 bp | CACCGACTGATGCAAGGACAAAGTTTGGAGCATTCGTaGTATGGGATGCCAAGACTCCAGGAGACTAAGTTT | + |
Preference number: 3 (lower is better) Translates to: HRLMQGQSLEHS*YGMPRLQETKF Trigger: AAACTTAGTCTCCTGGAGTCTTGGCATCCCATAGCACGAATGCTCCAAACTTTGTCCTTGCATCAGTCGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR GCA 72 bp | CAATGGAGGGATGTTACTGGCTTGCTTCCCCTGGCTTaGTTAGCTTGCTTTCATATAAAACCCAAGACTGCC | + |
Preference number: 3 (lower is better) Translates to: QWRDVTGLLPLA*LACFHIKPKTA Trigger: GGCAGTCTTGGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR TCA 72 bp | AGTCCATCATGGCACCAGATTTCTATAGTAGGAAGCTaGGCGATCACATCTCATCCACATACACGAAGCAGG | + |
Preference number: 3 (lower is better) Translates to: SPSWHQISIVGS*AITSHPHTRSR Trigger: CCTGCTTCGTGTATGTGGATGAGATGTGATCGCTCAGCTTCCTACTATAGAAATCTGGTGCCATGATGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR TCA 72 bp | CTACTATGCGTGGCCATGGGCTATGTCTTGTGCTGCTaGAGTGACTTGCAATCTCATTGTACACTTGATGGA | + |
Preference number: 3 (lower is better) Translates to: LLCVAMGYVLCC*SDLQSHCTLDG Trigger: TCCATCAAGTGTACAATGAGATTGCAAGTCACTTCAGCAGCACAAGACATAGCCCATGGCCACGCATAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR TCA 72 bp | GACAATGCTGGGTCTTCATTGACCCCCTCAGGCGTTTaGTTTACTAGAAATTCTTCCGTAGATGTGGCACTG | + |
Preference number: 3 (lower is better) Translates to: DNAGSSLTPSGV*FTRNSSVDVAL Trigger: CAGTGCCACATCTACGGAAGAATTTCTAGTAAATCAAACGCCTGAGGGGGTCAATGAAGACCCAGCATTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR GCA 72 bp | TTCTTCCTTGGTGATACTACTGGAGTTGACAGACAATaGTGGGTCTTCATTGACCCCCTCAGGCGTTTGATT | + |
Preference number: 3 (lower is better) Translates to: FFLGDTTGVDRQ*WVFIDPLRRLI Trigger: AATCAAACGCCTGAGGGGGTCAATGAAGACCCAGCATTGTCTGTCAACTCCAGTAGTATCACCAAGGAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR CCA 72 bp | TATATAGGTTCTGGGGACTCAGGGTGTCAGGATTGGTaGCACATTCCTGTACCAATTAAGCCATTTCACTGG | + |
Preference number: 3 (lower is better) Translates to: YIGSGDSGCQDW*HIPVPIKPFHW Trigger: CCAGTGAAATGGCTTAATTGGTACAGGAATGTGCCACCAATCCTGACACCCTGAGTCCCCAGAACCTATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CCA 72 bp | AATAAAGCCTCATGTGGTCTCTCATGGAATCAAGCTTaGTCTCTCATGAGTTCTAGGGGGTCCACTACTGTC | + |
Preference number: 3 (lower is better) Translates to: NKASCGLSWNQA*SLMSSRGSTTV Trigger: GACAGTAGTGGACCCCCTAGAACTCATGAGAGACCAAGCTTGATTCCATGAGAGACCACATGAGGCTTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CCA 72 bp | TTCCATATTGCTCTTCATCACCAAGGAAGTCAGGACTaGAACTCAAGCAGGTCAGGAAGCAGGAGCTTATTC | + |
Preference number: 3 (lower is better) Translates to: FHIALHHQGSQD*NSSRSGSRSLF Trigger: GAATAAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAAGAGCAATATGGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CCA 72 bp | AATTTACTTAAGGTTAGACATAGCTATGAAGGTGTGTaGGAAGTCCTCAAGGGAGGCTCACAGCTGCCACCA | + |
Preference number: 3 (lower is better) Translates to: NLLKVRHSYEGV*EVLKGGSQLPP Trigger: TGGTGGCAGCTGTGAGCCTCCCTTGAGGACTTCCCACACACCTTCATAGCTATGTCTAACCTTAAGTAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CCA 72 bp | TTCCTTGGTGATACTACTGGAGTTGACAGACAATGCTaGGTCTTCATTGACCCCCTCAGGCGTTTGATTTAC | + |
Preference number: 3 (lower is better) Translates to: FLGDTTGVDRQC*VFIDPLRRLIY Trigger: GTAAATCAAACGCCTGAGGGGGTCAATGAAGACCCAGCATTGTCTGTCAACTCCAGTAGTATCACCAAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR-3UTR CAA 90 bp | CACCTGCACCAGACTCTTTCCTTGTACCCCTCCCATACCCATTTCTTGAGAATAGTCAACGTGGCTAACTaGCTTACTTGGAAACTTGAA | + |
Preference number: 3 (lower is better) Translates to: HLHQTLSLYPSHTHFLRIVNVAN*LTWKLE Trigger: TTCAAGTTTCCAAGTAAGCAAGTTAGCCACGTTGAC...TATTCTCAAGAAATGGGTATGGGAGGGGTACAAGGAAAGAGTCTGGTGCAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR TCA 72 bp | TTCCACAGGAATAGGTGTGGCACAGTTAGATCTCATTaGGGGAATTCCTCAAGAGAGGCTCCATTATCTGTG | + |
Preference number: 3 (lower is better) Translates to: FHRNRCGTVRSH*GNSSREAPLSV Trigger: CACAGATAATGGAGCCTCTCTTGAGGAATTCCCTCAATGAGATCTAACTGTGCCACACCTATTCCTGTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR TCA 72 bp | TATGGGATGCCAAGACTCCAGGAGACTAAGTTTCCGTaGAACTTTTTGCCTCAGAATGGCGTCCAAGCTTTT | + |
Preference number: 3 (lower is better) Translates to: YGMPRLQETKFP*NFLPQNGVQAF Trigger: AAAAGCTTGGACGCCATTCTGAGGCAAAAAGTTTCACGGAAACTTAGTCTCCTGGAGTCTTGGCATCCCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR TCA 72 bp | GATACTGAAGGAAAGCACACAAATCCGTTCACCGACTaGTGCAAGGACAAAGTTTGGAGCATTCGTGCTATG | + |
Preference number: 3 (lower is better) Translates to: DTEGKHTNPFTD*CKDKVWSIRAM Trigger: CATAGCACGAATGCTCCAAACTTTGTCCTTGCATCAGTCGGTGAACGGATTTGTGTGCTTTCCTTCAGTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR GCA 72 bp | TGGCCATGGGCTATGTCTTGTGCTGCTGAAGTGACTTaGAATCTCATTGTACACTTGATGGACATGCTTTTG | + |
Preference number: 3 (lower is better) Translates to: WPWAMSCAAEVT*NLIVHLMDMLL Trigger: CAAAAGCATGTCCATCAAGTGTACAATGAGATTGCAAGTCACTTCAGCAGCACAAGACATAGCCCATGGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR CCA 72 bp | AATGTTCCACAACCTCCCCAAATAGCACCACCAACCTaGGACCAAGTAGTTAAATACACAAACTGTGGGTCA | + |
Preference number: 3 (lower is better) Translates to: NVPQPPQIAPPT*DQVVKYTNCGS Trigger: TGACCCACAGTTTGTGTATTTAACTACTTGGTCCCAGGTTGGTGGTGCTATTTGGGGAGGTTGTGGAACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR-3UTR CAA 90 bp | TGCAACCCCTGTCCTGAACTGAGACAAACTGTGAGTAAGAAACAGCCAACTGTGCCCAACCTCTTTTACTaGTTTACAACTTCACTCCTA | + |
Preference number: 3 (lower is better) Translates to: CNPCPELRQTVSKKQPTVPNLFY*FTTSLL Trigger: TAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGG...CACAGTTGGCTGTTTCTTACTCACAGTTTGTCTCAGTTCAGGACAGGGGTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
3UTR TCA 72 bp | TTGCAGGGTCAATGGACATATTTCTTCCTATACTTTTaGCTGACACCCCAGGATGCCCTTTCAAAGGAGAAG | + |
Preference number: 3 (lower is better) Translates to: LQGQWTYFFLYF*LTPQDALSKEK Trigger: CTTCTCCTTTGAAAGGGCATCCTGGGGTGTCAGTCAAAAGTATAGGAAGAAATATGTCCATTGACCCTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR GCA 72 bp | TATAACCTTCTTTCAACAACTTCTCCAAAATGCTACTaGAAACCTCAGGAAGACCCCCAGGTAAGGGCTTGT | + |
Preference number: 3 (lower is better) Translates to: YNLLSTTSPKCY*KPQEDPQVRAC Trigger: ACAAGCCCTTACCTGGGGGTCTTCCTGAGGTTTGCAGTAGCATTTTGGAGAAGTTGTTGAAAGAAGGTTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212817.2 |
||
3UTR GCA 72 bp | ATAACGATGAAACACAGGACTTGGGTCAGGACATCCTaGTACACCAGATGGTTCAATAGCTTTGTCTTTACC | + |
Preference number: 3 (lower is better) Translates to: ITMKHRTWVRTS*YTRWFNSFVFT Trigger: GGTAAAGACAAAGCTATTGAACCATCTGGTGTAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCATCGTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR CCA 72 bp | ATATATATAGGTTCTGGGGACTCAGGGTGTCAGGATTaGTGGCACATTCCTGTACCAATTAAGCCATTTCAC | + |
Preference number: 3 (lower is better) Translates to: IYIGSGDSGCQD*WHIPVPIKPFH Trigger: GTGAAATGGCTTAATTGGTACAGGAATGTGCCACCAATCCTGACACCCTGAGTCCCCAGAACCTATATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR-3UTR CAA 90 bp | CCAAGATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTGCCCTGGCTTGCTTAGCTaGCTTTCATATAAAACCCAA | + |
Preference number: 3 (lower is better) Translates to: PRCKLGRKGFIQLTLPYCPGLLS*LSYKTQ Trigger: TTGGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGG...GCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCATCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR GCA 72 bp | GACCCCCAGGTAAGGGCTTGTCTTTATCCACAGTGTTaGTCTCATAGTGAAATTCATAGCCAAAATGTTTCA | + |
Preference number: 3 (lower is better) Translates to: DPQVRACLYPQC*SHSEIHSQNVS Trigger: TGAAACATTTTGGCTATGAATTTCACTATGAGAGCAACACTGTGGATAAAGACAAGCCCTTACCTGGGGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212817.2 |
||
3UTR GCA 72 bp | TCTCCAATGTCACTGGTGATTATTCCCCCTTTAAATTaGTCAGACGCTTGGACGGTATCAAATTTTCGAGGT | + |
Preference number: 3 (lower is better) Translates to: SPMSLVIIPPLN*SDAWTVSNFRG Trigger: ACCTCGAAAATTTGATACCGTCCAAGCGTCTGAGCAATTTAAAGGGGGAATAATCACCAGTGACATTGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR CCA 72 bp | GGTGAAAGTAGGAGAATCAGGTTTCAAGATGATCCTTaGTTACATAGCAAGATTGAGGTCAACCTGGACCAT | + |
Preference number: 3 (lower is better) Translates to: GESRRIRFQDDP*LHSKIEVNLDH Trigger: ATGGTCCAGGTTGACCTCAATCTTGCTATGTAACCAAGGATCATCTTGAAACCTGATTCTCCTACTTTCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR-3UTR CAA 90 bp | GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATAAAACCCGTATATGGGAGTGACTaGGCTGTTATTCTAAGTTTA | + |
Preference number: 3 (lower is better) Translates to: DVTGLLPLACLACFHIKPVYGSD*AVILSL Trigger: TAAACTTAGAATAACAGCCAAGTCACTCCCATATAC...GGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR TCA 72 bp | GACACCCTCTGGATGCTTGAAATCCATAACAATCGCTaGCCCCAAACTGAGAGAAATAATCTCATCTTCAAA | + |
Preference number: 3 (lower is better) Translates to: DTLWMLEIHNNR*PQTERNNLIFK Trigger: TTTGAAGATGAGATTATTTCTCTCAGTTTGGGGTCAGCGATTGTTATGGATTTCAAGCATCCAGAGGGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212358.2 ENSMUST00000212817.2 |
||
3UTR TCA 72 bp | AGGGTCAATGGACATATTTCTTCCTATACTTTTGACTaGCACCCCAGGATGCCCTTTCAAAGGAGAAGAAAT | + |
Preference number: 3 (lower is better) Translates to: RVNGHISSYTFD*HPRMPFQRRRN Trigger: ATTTCTTCTCCTTTGAAAGGGCATCCTGGGGTGTCAGTCAAAAGTATAGGAAGAAATATGTCCATTGACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR TCA 72 bp | CCTCAGGAAGACCTTATTTTTCATGTACTTGTGTCTTaGCTGACCCATCACATGAGCTTAGATATGGAGACT | + |
Preference number: 3 (lower is better) Translates to: PQEDLIFHVLVS*LTHHMSLDMET Trigger: AGTCTCCATATCTAAGCTCATGTGATGGGTCAGTCAAGACACAAGTACATGAAAAATAAGGTCTTCCTGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR CCA 72 bp | TGGTGGCACATTCCTGTACCAATTAAGCCATTTCACTaGTCTACATGTTCCTTTAATACAGTGGTTCTCAAC | + |
Preference number: 3 (lower is better) Translates to: WWHIPVPIKPFH*STCSFNTVVLN Trigger: GTTGAGAACCACTGTATTAAAGGAACATGTAGACCAGTGAAATGGCTTAATTGGTACAGGAATGTGCCACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR TCA 72 bp | GGCTACGATCACACCCAATCATATATAAGTCCTTGTTaGTGCCAAGGTATTTTCCATTTCCACATCCGATAT | + |
Preference number: 3 (lower is better) Translates to: GYDHTQSYISPC*CQGIFHFHIRY Trigger: ATATCGGATGTGGAAATGGAAAATACCTTGGCATCAACAAGGACTTATATATGATTGGGTGTGATCGTAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR CCA 72 bp | GTTCCTCTCGGAGTCTTTCATTATGATCAGTCAACGTaGCTAACTTGCTTACTTGGAAACTTGAATTCACAA | + |
Preference number: 3 (lower is better) Translates to: VPLGVFHYDQST*LTCLLGNLNSQ Trigger: TTGTGAATTCAAGTTTCCAAGTAAGCAAGTTAGCCACGTTGACTGATCATAATGAAAGACTCCGAGAGGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR-3UTR CAA 90 bp | GCATTTATGATCACCACACACACCATGTTTACTTATTTGTTCGCTTGTACCAGCTCAGATACTTCCTTATaGTCCAGGAATATTCACTTC | + |
Preference number: 3 (lower is better) Translates to: AFMITTHTMFTYLFACTSSDTSL*SRNIHF Trigger: GAAGTGAATATTCCTGGACAATAAGGAAGTATCTGA...GCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATCATAAATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
3UTR TCA 72 bp | AATCTTTCCTTGGAGGTTCTTATAATAAAACGATACTaGAGGAAAGCACACAAATCCGTTCACCGACTGATG | + |
Preference number: 3 (lower is better) Translates to: NLSLEVLIIKRY*RKAHKSVHRLM Trigger: CATCAGTCGGTGAACGGATTTGTGTGCTTTCCTTCAGTATCGTTTTATTATAAGAACCTCCAAGGAAAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR TCA 72 bp | GGGATTTCTAGCTCTTATCTAGTAAATTGTAATGCCTaGTTTCTTTCACTATCTACACTGGTGGCATTTCGT | + |
Preference number: 3 (lower is better) Translates to: GISSSYLVNCNA*FLSLSTLVAFR Trigger: ACGAAATGCCACCAGTGTAGATAGTGAAAGAAATCAGGCATTACAATTTACTAGATAAGAGCTAGAAATCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR-3UTR CAA 90 bp | ATGACAAACATAGGTTCTTCAATTCATCTACACCCCAACCTCTTTTACTTGTTTTCAGATACTTCCTTATaGTCCAGGAATATTCACTTC | + |
Preference number: 3 (lower is better) Translates to: MTNIGSSIHLHPNLFYLFSDTSL*SRNIHF Trigger: GAAGTGAATATTCCTGGACAATAAGGAAGTATCTGA...AAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGAAGAACCTATGTTTGTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
3UTR TCA 72 bp | AAGTTAGGTGATACATTAAGATCAACCAAGGTATACTaGGGTAGCCCGATGCAAAATAACTCTTTACACAAA | + |
Preference number: 3 (lower is better) Translates to: KLGDTLRSTKVY*GSPMQNNSLHK Trigger: TTTGTGTAAAGAGTTATTTTGCATCGGGCTACCTCAGTATACCTTGGTTGATCTTAATGTATCACCTAACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR TCA 72 bp | TATATGAATAGGGAGTTCAGAATTAGGAACTTTCCTTaGCTTATACTCTTCTTCCTTGGTGATACTACTGGA | + |
Preference number: 3 (lower is better) Translates to: YMNREFRIRNFP*LILFFLGDTTG Trigger: TCCAGTAGTATCACCAAGGAAGAAGAGTATAAGTCAAGGAAAGTTCCTAATTCTGAACTCCCTATTCATATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR CCA 72 bp | AAAGACTTTAGGAGAAACTTAGCAAGGTTTTCACACTaGCAGTTCCTATTTAGTCTCAAGAAAACTCTAGTT | + |
Preference number: 3 (lower is better) Translates to: KDFRRNLARFSH*QFLFSLKKTLV Trigger: AACTAGAGTTTTCTTGAGACTAAATAGGAACTGCCAGTGTGAAAACCTTGCTAAGTTTCTCCTAAAGTCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR GCA 72 bp | TATAACCTTCTTTCAACAACTTCTCCAAAATGCTACTaGAAACCTCAGGAAGACCTTATTTTTCATGTACTT | + |
Preference number: 3 (lower is better) Translates to: YNLLSTTSPKCY*KPQEDLIFHVL Trigger: AAGTACATGAAAAATAAGGTCTTCCTGAGGTTTGCAGTAGCATTTTGGAGAAGTTGTTGAAAGAAGGTTATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR CAA 72 bp | GGCCTGCCCACCAGGTCTCAGGAGACGGGCAAGTTCTaGGAGAGCTTCCACTCTGCGCTCTGCAGTTGCAAA | + |
Preference number: 4 (lower is better) Translates to: GLPTRSQETGKF*ESFHSALCSCK Trigger: TTTGCAACTGCAGAGCGCAGAGTGGAAGCTCTCCAAGAACTTGCCCGTCTCCTGAGACCTGGTGGGCAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
CDS-3UTR TCA 90 bp | ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGCACAAGACCCACTTCTaGCAGGAACAGCCAGCGCAT | + |
Preference number: 4 (lower is better) Translates to: TRLALNSEIRLPLPPECWHKTHF*QEQPAH Trigger: ATGCGCTGGCTGTTCCTGTCAGAAGTGGGTCTTGTG...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR TCA 90 bp | ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGATGCTGGGTCTTCATTaGCCCCCTCAGGCGTTTGAT | + |
Preference number: 4 (lower is better) Translates to: TRLALNSEIRLPLPPECWMLGLH*PPQAFD Trigger: ATCAAACGCCTGAGGGGGTCAATGAAGACCCAGCAT...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGGAGAGCTTCCACTCTaGGCTCTGCAGTTGCAAAGT | + |
Preference number: 4 (lower is better) Translates to: TRLALNSEIRLPLPPECWGELPL*ALQLQS Trigger: ACTTTGCAACTGCAGAGCGCAGAGTGGAAGCTCTCC...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGGAGTTGACAGACAATaGTGGGTCTTCATTGACCCC | + |
Preference number: 4 (lower is better) Translates to: TRLALNSEIRLPLPPECWGVDRQ*WVFIDP Trigger: GGGGTCAATGAAGACCCAGCATTGTCTGTCAACTCC...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATCGCAGACTAAGGCCTaGAACTGCCTCTCTCTACAA | + |
Preference number: 4 (lower is better) Translates to: QAGLELRNSPASASRVLGSQTKA*NCLSLQ Trigger: TTGTAGAGAGAGGCAGTTCCAGGCCTTAGTCTGCGA...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGATGAAACACAGGACTTaGGTCAGGACATCCTGCTAC | + |
Preference number: 4 (lower is better) Translates to: TRLALNSEIRLPLPPECWMKHRT*VRTSCY Trigger: GTAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCAT...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGACATCACCCACAGCCTaGCATGAAGCTTCCAATTCT | + |
Preference number: 4 (lower is better) Translates to: TRLALNSEIRLPLPPECWTSPTA*HEASNS Trigger: AGAATTGGAAGCTTCATGCCAGGCTGTGGGTGATGT...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR TCA 90 bp | CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGACTTGTGCTGCTGAAGTaGCTTGCAATCTCATTGTAC | + |
Preference number: 4 (lower is better) Translates to: QAGLELRNSPASASRVLGLVLLK*LAISLY Trigger: GTACAATGAGATTGCAAGTCACTTCAGCAGCACAAG...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR TCA 90 bp | CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGAACCCCCTCAGGCGTTTaGTTTACTAGAAATTCTTCC | + |
Preference number: 4 (lower is better) Translates to: QAGLELRNSPASASRVLGTPSGV*FTRNSS Trigger: GGAAGAATTTCTAGTAAATCAAACGCCTGAGGGGGT...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGATTCCCCCTTTAAATTaGTCAGACGCTTGGACGGTA | + |
Preference number: 4 (lower is better) Translates to: TRLALNSEIRLPLPPECWIPPLN*SDAWTV Trigger: TACCGTCCAAGCGTCTGAGCAATTTAAAGGGGGAAT...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATGCGCATTCCCCTCTTaGTTAAAGTCAAGTCTCCAA | + |
Preference number: 4 (lower is better) Translates to: QAGLELRNSPASASRVLGCAFPS*LKSSLQ Trigger: TTGGAGACTTGACTTTAAGCAAGAGGGGAATGCGCA...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR TCA 90 bp | ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGCGAGGTGTAATTCCATaGGTCCAAAGGTATCTAGAT | + |
Preference number: 4 (lower is better) Translates to: TRLALNSEIRLPLPPECWRGVIP*VQRYLD Trigger: ATCTAGATACCTTTGGACTCATGGAATTACACCTCG...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR TCA 90 bp | ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGTATGTCTTGTGCTGCTaGAGTGACTTGCAATCTCAT | + |
Preference number: 4 (lower is better) Translates to: TRLALNSEIRLPLPPECWYVLCC*SDLQSH Trigger: ATGAGATTGCAAGTCACTTCAGCAGCACAAGACATA...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGAAAGACACTGCTTGGATaGCTTCATGTTTCAGCAACA | + |
Preference number: 4 (lower is better) Translates to: QAGLELRNSPASASRVLGKTLLG*LHVSAT Trigger: TGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTT...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATCTTCAAATGCAGAATaGGTGTCAATATGGGCAGGA | + |
Preference number: 4 (lower is better) Translates to: QAGLELRNSPASASRVLGSSNAE*VSIWAG Trigger: TCCTGCCCATATTGACACGCATTCTGCATTTGAAGA...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGAGCTGCTGAAGTGACTTaGAATCTCATTGTACACTTG | + |
Preference number: 4 (lower is better) Translates to: QAGLELRNSPASASRVLGAAEVT*NLIVHL Trigger: CAAGTGTACAATGAGATTGCAAGTCACTTCAGCAGC...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATCAGCAACACATGCCTaGCTTTACTCTGTTTCCTTA | + |
Preference number: 4 (lower is better) Translates to: QAGLELRNSPASASRVLGSATHA*LYSVSL Trigger: TAAGGAAACAGAGTAAAGCCAGGCATGTGTTGCTGA...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATACTGTGACACCCTCTaGATGCTTGAAATCCATAAC | + |
Preference number: 4 (lower is better) Translates to: QAGLELRNSPASASRVLGYCDTL*MLEIHN Trigger: GTTATGGATTTCAAGCATCCAGAGGGTGTCACAGTA...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR TCA 90 bp | CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGAAGCACATCTTGGGAATaGAAGCAGGTCCTATTTATA | + |
Preference number: 4 (lower is better) Translates to: QAGLELRNSPASASRVLGSTSWE*KQVLFI Trigger: TATAAATAGGACCTGCTTTCATTCCCAAGATGTGCT...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGAAATTGCTCAGACGCTTaGACGGTATCAAATTTTCGA | + |
Preference number: 4 (lower is better) Translates to: QAGLELRNSPASASRVLGNCSDA*TVSNFR Trigger: TCGAAAATTTGATACCGTCCAAGCGTCTGAGCAATT...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR TCA 90 bp | CACCTGCACCAGACTCTTTCCTTGTACCCCTCCCATACCCATTTCTTGAGAATACACAAGACCCACTTCTaGCAGGAACAGCCAGCGCAT | + |
Preference number: 4 (lower is better) Translates to: HLHQTLSLYPSHTHFLRIHKTHF*QEQPAH Trigger: ATGCGCTGGCTGTTCCTGTCAGAAGTGGGTCTTGTG...TATTCTCAAGAAATGGGTATGGGAGGGGTACAAGGAAAGAGTCTGGTGCAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
CDS-3UTR GCA 90 bp | CCCTTCTTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTTGGGAGAGCTTCCACTCTaGGCTCTGCAGTTGCAAAGT | + |
Preference number: 4 (lower is better) Translates to: PFLKVSSLGTSFLFPAGLGELPL*ALQLQS Trigger: ACTTTGCAACTGCAGAGCGCAGAGTGGAAGCTCTCC...CAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR GCA 90 bp | CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGACTTTATCCACAGTGTTaGTCTCATAGTGAAATTCAT | + |
Preference number: 4 (lower is better) Translates to: QAGLELRNSPASASRVLGLYPQC*SHSEIH Trigger: ATGAATTTCACTATGAGAGCAACACTGTGGATAAAG...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATATTACAAATGCATATaGCTTATTAGGTGGCATGAG | + |
Preference number: 4 (lower is better) Translates to: QAGLELRNSPASASRVLGYYKCI*LIRWHE Trigger: CTCATGCCACCTAATAAGCCATATGCATTTGTAATA...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATCATCTTTATCTCCTTaGCTAATTCTCTTTCCTCTA | + |
Preference number: 4 (lower is better) Translates to: QAGLELRNSPASASRVLGSSLSP*LILFPL Trigger: TAGAGGAAAGAGAATTAGCCAAGGAGATAAAGATGA...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGTCATCTTTATCTCCTTaGCTAATTCTCTTTCCTCTA | + |
Preference number: 4 (lower is better) Translates to: TRLALNSEIRLPLPPECWSSLSP*LILFPL Trigger: TAGAGGAAAGAGAATTAGCCAAGGAGATAAAGATGA...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
3UTR CAA 72 bp | GGATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTaGCTTTCATATAAAACCCAAGACTGCCAGTCCAGG | + |
Preference number: 4 (lower is better) Translates to: GCYWLASPGLLS*LSYKTQDCQSR Trigger: CCTGGACTGGCAGTCTTGGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
CDS-3UTR TCA 90 bp | GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATAAAACCCATGCTGGGTCTTCATTaGCCCCCTCAGGCGTTTGAT | + |
Preference number: 4 (lower is better) Translates to: DVTGLLPLACLACFHIKPMLGLH*PPQAFD Trigger: ATCAAACGCCTGAGGGGGTCAATGAAGACCCAGCAT...GGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
CDS-3UTR GCA 90 bp | ATGCAAGCATCACAAGACCCACTTCTGACAGGAACAGCCAGCGCATCGCAGACTAGTGGGATAAGACACTaGTTGGATGCCTTCATGTTT | + |
Preference number: 4 (lower is better) Translates to: MQASQDPLLTGTASASQTSGIRH*LDAFMF Trigger: AAACATGAAGGCATCCAAGCAGTGTCTTATCCCACT...AGTCTGCGATGCGCTGGCTGTTCCTGTCAGAAGTGGGTCTTGTGATGCTTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
CDS-3UTR GCA 90 bp | CCCTTCTTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTTGTCTCCAAAATGCTACTaGAAACCTCAGGAAGACCCC | + |
Preference number: 4 (lower is better) Translates to: PFLKVSSLGTSFLFPAGLSPKCY*KPQEDP Trigger: GGGGTCTTCCTGAGGTTTGCAGTAGCATTTTGGAGA...CAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
3UTR CAA 72 bp | GCAATGGAGGGATGTTACTGGCTTGCTTCCCCTGGCTaGCTTAGCTTGCTTTCATATAAAACCCAAGACTGC | + |
Preference number: 4 (lower is better) Translates to: AMEGCYWLASPG*LSLLSYKTQDC Trigger: GCAGTCTTGGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
CDS-3UTR TCA 90 bp | CCCTTCTTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTTGCTTGTGCTGCTGAAGTaGCTTGCAATCTCATTGTAC | + |
Preference number: 4 (lower is better) Translates to: PFLKVSSLGTSFLFPAGLLVLLK*LAISLY Trigger: GTACAATGAGATTGCAAGTCACTTCAGCAGCACAAG...CAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR TCA 90 bp | CCAAGATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTGCTACCAGGGTTTCTTTTaGGGTGCCAGGGAACCAGCA | + |
Preference number: 4 (lower is better) Translates to: PRCKLGRKGFIQLTLPYCYQGFF*GAREPA Trigger: TGCTGGTTCCCTGGCACCTCAAAAGAAACCCTGGTA...GCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCATCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
CDS-3UTR CCA 90 bp | CCCTTCTTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTTGCACTATGGAACCACTTaGCAAAGCTTTCAGGAACTC | + |
Preference number: 4 (lower is better) Translates to: PFLKVSSLGTSFLFPAGLHYGTT*QSFQEL Trigger: GAGTTCCTGAAAGCTTTGCCAAGTGGTTCCATAGTG...CAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CCA 90 bp | CACCTGCACCAGACTCTTTCCTTGTACCCCTCCCATACCCATTTCTTGAGAATAATGAAACACAGGACTTaGGTCAGGACATCCTGCTAC | + |
Preference number: 4 (lower is better) Translates to: HLHQTLSLYPSHTHFLRIMKHRT*VRTSCY Trigger: GTAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCAT...TATTCTCAAGAAATGGGTATGGGAGGGGTACAAGGAAAGAGTCTGGTGCAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
CDS-3UTR TCA 90 bp | CCCTTCTTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTTGTATGTCTTGTGCTGCTaGAGTGACTTGCAATCTCAT | + |
Preference number: 4 (lower is better) Translates to: PFLKVSSLGTSFLFPAGLYVLCC*SDLQSH Trigger: ATGAGATTGCAAGTCACTTCAGCAGCACAAGACATA...CAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR GCA 90 bp | TGCAACCCCTGTCCTGAACTGAGACAAACTGTGAGTAAGAAACAGCCAACTGTGTGCGCATTCCCCTCTTaGTTAAAGTCAAGTCTCCAA | + |
Preference number: 4 (lower is better) Translates to: CNPCPELRQTVSKKQPTVCAFPS*LKSSLQ Trigger: TTGGAGACTTGACTTTAAGCAAGAGGGGAATGCGCA...CACAGTTGGCTGTTTCTTACTCACAGTTTGTCTCAGTTCAGGACAGGGGTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR GCA 90 bp | CACCTGCACCAGACTCTTTCCTTGTACCCCTCCCATACCCATTTCTTGAGAATATGCGCATTCCCCTCTTaGTTAAAGTCAAGTCTCCAA | + |
Preference number: 4 (lower is better) Translates to: HLHQTLSLYPSHTHFLRICAFPS*LKSSLQ Trigger: TTGGAGACTTGACTTTAAGCAAGAGGGGAATGCGCA...TATTCTCAAGAAATGGGTATGGGAGGGGTACAAGGAAAGAGTCTGGTGCAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
CDS-3UTR CCA 90 bp | CCCTTCTTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTTGTCAGCAACACATGCCTaGCTTTACTCTGTTTCCTTA | + |
Preference number: 4 (lower is better) Translates to: PFLKVSSLGTSFLFPAGLSATHA*LYSVSL Trigger: TAAGGAAACAGAGTAAAGCCAGGCATGTGTTGCTGA...CAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CCA 90 bp | CCCTTCTTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTTGTACTGTGACACCCTCTaGATGCTTGAAATCCATAAC | + |
Preference number: 4 (lower is better) Translates to: PFLKVSSLGTSFLFPAGLYCDTL*MLEIHN Trigger: GTTATGGATTTCAAGCATCCAGAGGGTGTCACAGTA...CAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CCA 90 bp | TTCTGGCTAAAGTGTTTCTGGGCAGGCATCCAGAATGTAATAGCAAGATGCAGTTACTATGCGTGGCCATaGGCTATGTCTTGTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: FWLKCFWAGIQNVIARCSYYAWP*AMSCAA Trigger: AGCAGCACAAGACATAGCCCATGGCCACGCATAGTA...ACTGCATCTTGCTATTACATTCTGGATGCCTGCCCAGAAACACTTTAGCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CCA 90 bp | TGCAACCCCTGTCCTGAACTGAGACAAACTGTGAGTAAGAAACAGCCAACTGTGCACTATGGAACCACTTaGCAAAGCTTTCAGGAACTC | + |
Preference number: 4 (lower is better) Translates to: CNPCPELRQTVSKKQPTVHYGTT*QSFQEL Trigger: GAGTTCCTGAAAGCTTTGCCAAGTGGTTCCATAGTG...CACAGTTGGCTGTTTCTTACTCACAGTTTGTCTCAGTTCAGGACAGGGGTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
3UTR CAA 72 bp | GATCACCACACACACCATGTTTACTTATTTGTTCGCTaGTACCAGCCATCCCTTCTTGAAGGTCAGCTCCCT | + |
Preference number: 4 (lower is better) Translates to: DHHTHHVYLFVR*YQPSLLEGQLP Trigger: AGGGAGCTGACCTTCAAGAAGGGATGGCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
3UTR CAA 72 bp | GAGCTTATTCAGAGGCAATGGAGGGATGTTACTGGCTaGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATA | + |
Preference number: 4 (lower is better) Translates to: ELIQRQWRDVTG*LPLACLACFHI Trigger: TATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTGCCTCTGAATAAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CAA 72 bp | TCAGGACATCCTGCTACACCAGATGGTTCAATAGCTTaGTCTTTACCAGGGTTTCTTTTGAGGTGCCAGGGA | + |
Preference number: 4 (lower is better) Translates to: SGHPATPDGSIA*SLPGFLLRCQG Trigger: TCCCTGGCACCTCAAAAGAAACCCTGGTAAAGACAAAGCTATTGAACCATCTGGTGTAGCAGGATGTCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
CDS-3UTR TCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAACACAAGACCCACTTCTaGCAGGAACAGCCAGCGCAT | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQREHKTHF*QEQPAH Trigger: ATGCGCTGGCTGTTCCTGTCAGAAGTGGGTCTTGTG...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR TCA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGTACCAGGGTTTCTTTTaGGGTGCCAGGGAACCAGCA | + |
Preference number: 4 (lower is better) Translates to: TILKRHVRGTYVYEVRQRYQGFF*GAREPA Trigger: TGCTGGTTCCCTGGCACCTCAAAAGAAACCCTGGTA...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR TCA 90 bp | GCATTTATGATCACCACACACACCATGTTTACTTATTTGTTCGCTTGTACCAGCACCCACAGCCTGGCATaGAGCTTCCAATTCTCCATC | + |
Preference number: 4 (lower is better) Translates to: AFMITTHTMFTYLFACTSTHSLA*SFQFSI Trigger: GATGGAGAATTGGAAGCTTCATGCCAGGCTGTGGGT...GCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATCATAAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR TCA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGACCCACAGCCTGGCATaGAGCTTCCAATTCTCCATC | + |
Preference number: 4 (lower is better) Translates to: TILKRHVRGTYVYEVRQRTHSLA*SFQFSI Trigger: GATGGAGAATTGGAAGCTTCATGCCAGGCTGTGGGT...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | TGCAACCCCTGTCCTGAACTGAGACAAACTGTGAGTAAGAAACAGCCAACTGTGAGTGGGATAAGACACTaGTTGGATGCCTTCATGTTT | + |
Preference number: 4 (lower is better) Translates to: CNPCPELRQTVSKKQPTVSGIRH*LDAFMF Trigger: AAACATGAAGGCATCCAAGCAGTGTCTTATCCCACT...CACAGTTGGCTGTTTCTTACTCACAGTTTGTCTCAGTTCAGGACAGGGGTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR GCA 90 bp | GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATAAAACCCATTCCCCCTTTAAATTaGTCAGACGCTTGGACGGTA | + |
Preference number: 4 (lower is better) Translates to: DVTGLLPLACLACFHIKPIPPLN*SDAWTV Trigger: TACCGTCCAAGCGTCTGAGCAATTTAAAGGGGGAAT...GGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
CDS-3UTR GCA 90 bp | CCAAGATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTGCTCCACATCCGATATCTaGCACTATGGAACCACTTGG | + |
Preference number: 4 (lower is better) Translates to: PRCKLGRKGFIQLTLPYCSTSDI*HYGTTW Trigger: CCAAGTGGTTCCATAGTGGCAGATATCGGATGTGGA...GCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCATCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
CDS-3UTR GCA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGGAGAGCTTCCACTCTaGGCTCTGCAGTTGCAAAGT | + |
Preference number: 4 (lower is better) Translates to: TILKRHVRGTYVYEVRQRGELPL*ALQLQS Trigger: ACTTTGCAACTGCAGAGCGCAGAGTGGAAGCTCTCC...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
3UTR CAA 72 bp | GGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATaGCTCTTCATCACCAAGGAAGTCAGGACTGGAACT | + |
Preference number: 4 (lower is better) Translates to: GEERVYSAYTSI*LFITKEVRTGT Trigger: AGTTCCAGTCCTGACTTCCTTGGTGATGAAGAGCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
3UTR CAA 72 bp | GACTTATACTCTTCTTCCTTGGTGATACTACTGGAGTaGACAGACAATGCTGGGTCTTCATTGACCCCCTCA | + |
Preference number: 4 (lower is better) Translates to: DLYSSSLVILLE*TDNAGSSLTPS Trigger: TGAGGGGGTCAATGAAGACCCAGCATTGTCTGTCAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
CDS-3UTR TCA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTCACAAGACCCACTTCTaGCAGGAACAGCCAGCGCAT | + |
Preference number: 4 (lower is better) Translates to: HKLMSNTILKRHVRGTYVHKTHF*QEQPAH Trigger: ATGCGCTGGCTGTTCCTGTCAGAAGTGGGTCTTGTG...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR TCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAATGCTGGGTCTTCATTaGCCCCCTCAGGCGTTTGAT | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQREMLGLH*PPQAFD Trigger: ATCAAACGCCTGAGGGGGTCAATGAAGACCCAGCAT...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR TCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAATACCAGGGTTTCTTTTaGGGTGCCAGGGAACCAGCA | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQREYQGFF*GAREPA Trigger: TGCTGGTTCCCTGGCACCTCAAAAGAAACCCTGGTA...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | GCATTTATGATCACCACACACACCATGTTTACTTATTTGTTCGCTTGTACCAGCGGAGTTGACAGACAATaGTGGGTCTTCATTGACCCC | + |
Preference number: 4 (lower is better) Translates to: AFMITTHTMFTYLFACTSGVDRQ*WVFIDP Trigger: GGGGTCAATGAAGACCCAGCATTGTCTGTCAACTCC...GCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATCATAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CCA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGTACTATGCGTGGCCATaGGCTATGTCTTGTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: TILKRHVRGTYVYEVRQRYYAWP*AMSCAA Trigger: AGCAGCACAAGACATAGCCCATGGCCACGCATAGTA...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGTCGCAGACTAAGGCCTaGAACTGCCTCTCTCTACAA | + |
Preference number: 4 (lower is better) Translates to: TILKRHVRGTYVYEVRQRSQTKA*NCLSLQ Trigger: TTGTAGAGAGAGGCAGTTCCAGGCCTTAGTCTGCGA...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | GCATTTATGATCACCACACACACCATGTTTACTTATTTGTTCGCTTGTACCAGCTCGCAGACTAAGGCCTaGAACTGCCTCTCTCTACAA | + |
Preference number: 4 (lower is better) Translates to: AFMITTHTMFTYLFACTSSQTKA*NCLSLQ Trigger: TTGTAGAGAGAGGCAGTTCCAGGCCTTAGTCTGCGA...GCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATCATAAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
3UTR CAA 72 bp | GGTCGTTTGACCCCCAAAGGGGTCATGACCTACAGGTaGAGAACTGCTGCTTTAATATATAACCAACATCTT | + |
Preference number: 4 (lower is better) Translates to: GRLTPKGVMTYR*RTAALIYNQHL Trigger: AAGATGTTGGTTATATATTAAAGCAGCAGTTCTCAACCTGTAGGTCATGACCCCTTTGGGGGTCAAACGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
CDS-3UTR TCA 90 bp | CCAAGATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTGCCGAGGTGTAATTCCATaGGTCCAAAGGTATCTAGAT | + |
Preference number: 4 (lower is better) Translates to: PRCKLGRKGFIQLTLPYCRGVIP*VQRYLD Trigger: ATCTAGATACCTTTGGACTCATGGAATTACACCTCG...GCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCATCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
CDS-3UTR TCA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTATGCTGGGTCTTCATTaGCCCCCTCAGGCGTTTGAT | + |
Preference number: 4 (lower is better) Translates to: HKLMSNTILKRHVRGTYVMLGLH*PPQAFD Trigger: ATCAAACGCCTGAGGGGGTCAATGAAGACCCAGCAT...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR TCA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTACCCACAGCCTGGCATaGAGCTTCCAATTCTCCATC | + |
Preference number: 4 (lower is better) Translates to: HKLMSNTILKRHVRGTYVTHSLA*SFQFSI Trigger: GATGGAGAATTGGAAGCTTCATGCCAGGCTGTGGGT...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | CTGATTGCCTGTATCTTCTGTCCAATTCACACTCTCCAGAAGCTTTTTCTCCTCAGTGGGATAAGACACTaGTTGGATGCCTTCATGTTT | + |
Preference number: 4 (lower is better) Translates to: LIACIFCPIHTLQKLFLLSGIRH*LDAFMF Trigger: AAACATGAAGGCATCCAAGCAGTGTCTTATCCCACT...GAGGAGAAAAAGCTTCTGGAGAGTGTGAATTGGACAGAAGATACAGGCAATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212817.2 |
||
CDS-3UTR GCA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGTCTCCAAAATGCTACTaGAAACCTCAGGAAGACCCC | + |
Preference number: 4 (lower is better) Translates to: TILKRHVRGTYVYEVRQRSPKCY*KPQEDP Trigger: GGGGTCTTCCTGAGGTTTGCAGTAGCATTTTGGAGA...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 |
||
CDS-3UTR GCA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGTCCACATCCGATATCTaGCACTATGGAACCACTTGG | + |
Preference number: 4 (lower is better) Translates to: TILKRHVRGTYVYEVRQRSTSDI*HYGTTW Trigger: CCAAGTGGTTCCATAGTGGCAGATATCGGATGTGGA...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTGGAGAGCTTCCACTCTaGGCTCTGCAGTTGCAAAGT | + |
Preference number: 4 (lower is better) Translates to: HKLMSNTILKRHVRGTYVGELPL*ALQLQS Trigger: ACTTTGCAACTGCAGAGCGCAGAGTGGAAGCTCTCC...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAGGAGTTGACAGACAATaGTGGGTCTTCATTGACCCC | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQREGVDRQ*WVFIDP Trigger: GGGGTCAATGAAGACCCAGCATTGTCTGTCAACTCC...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAATACTATGCGTGGCCATaGGCTATGTCTTGTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQREYYAWP*AMSCAA Trigger: AGCAGCACAAGACATAGCCCATGGCCACGCATAGTA...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATAAAACCCTCCTGCTACACCAGATaGTTCAATAGCTTTGTCTTT | + |
Preference number: 4 (lower is better) Translates to: DVTGLLPLACLACFHIKPSCYTR*FNSFVF Trigger: AAAGACAAAGCTATTGAACCATCTGGTGTAGCAGGA...GGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
CDS-3UTR CCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAGAATGCGTGTCAATATaGGCAGGAATTCCCCCAGGT | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQREECVSI*AGIPPG Trigger: ACCTGGGGGAATTCCTGCCCATATTGACACGCATTC...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212294.2 |
||
3UTR CAA 72 bp | TTTACTTATTTGTTCGCTTGTACCAGCCATCCCTTCTaGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTT | + |
Preference number: 4 (lower is better) Translates to: FTYLFACTSHPF*KVSSLGTSFLF Trigger: AAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGGATGGCTGGTACAAGCGAACAAATAAGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR TCA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGACCCCCTCAGGCGTTTaGTTTACTAGAAATTCTTCC | + |
Preference number: 4 (lower is better) Translates to: TILKRHVRGTYVYEVRQRTPSGV*FTRNSS Trigger: GGAAGAATTTCTAGTAAATCAAACGCCTGAGGGGGT...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR TCA 90 bp | TTCTGGCTAAAGTGTTTCTGGGCAGGCATCCAGAATGTAATAGCAAGATGCAGTAGCACATCTTGGGAATaGAAGCAGGTCCTATTTATA | + |
Preference number: 4 (lower is better) Translates to: FWLKCFWAGIQNVIARCSSTSWE*KQVLFI Trigger: TATAAATAGGACCTGCTTTCATTCCCAAGATGTGCT...ACTGCATCTTGCTATTACATTCTGGATGCCTGCCCAGAAACACTTTAGCCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR GCA 90 bp | TTCTGGCTAAAGTGTTTCTGGGCAGGCATCCAGAATGTAATAGCAAGATGCAGTACAACTTCTCCAAAATaGTACTGCAAACCTCAGGAA | + |
Preference number: 4 (lower is better) Translates to: FWLKCFWAGIQNVIARCSTTSPK*YCKPQE Trigger: TTCCTGAGGTTTGCAGTAGCATTTTGGAGAAGTTGT...ACTGCATCTTGCTATTACATTCTGGATGCCTGCCCAGAAACACTTTAGCCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR GCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAATCCACATCCGATATCTaGCACTATGGAACCACTTGG | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQRESTSDI*HYGTTW Trigger: CCAAGTGGTTCCATAGTGGCAGATATCGGATGTGGA...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAAGGAGTTGACAGACAATaGTGGGTCTTCATTGACCCC | + |
Preference number: 4 (lower is better) Translates to: TPSSSDTSLLSRNIHFIKGVDRQ*WVFIDP Trigger: GGGGTCAATGAAGACCCAGCATTGTCTGTCAACTCC...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAATACTATGCGTGGCCATaGGCTATGTCTTGTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: TPSSSDTSLLSRNIHFIKYYAWP*AMSCAA Trigger: AGCAGCACAAGACATAGCCCATGGCCACGCATAGTA...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | TTCTGGCTAAAGTGTTTCTGGGCAGGCATCCAGAATGTAATAGCAAGATGCAGTTCCTGCTACACCAGATaGTTCAATAGCTTTGTCTTT | + |
Preference number: 4 (lower is better) Translates to: FWLKCFWAGIQNVIARCSSCYTR*FNSFVF Trigger: AAAGACAAAGCTATTGAACCATCTGGTGTAGCAGGA...ACTGCATCTTGCTATTACATTCTGGATGCCTGCCCAGAAACACTTTAGCCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAATGAAACACAGGACTTaGGTCAGGACATCCTGCTAC | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQREMKHRT*VRTSCY Trigger: GTAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCAT...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
3UTR CAA 72 bp | TGCGCCACCACACCCAGCTCTTCAGATACTTCCTTATaGTCCAGGAATATTCACTTCATTAAAATCTCACAT | + |
Preference number: 4 (lower is better) Translates to: CATTPSSSDTSL*SRNIHFIKISH Trigger: ATGTGAGATTTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGTGGTGGCGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
3UTR CAA 72 bp | AGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTaGTCTGTGTTTGTGGTAATCAGTACTAAATCTAGA | + |
Preference number: 4 (lower is better) Translates to: SSLGTSFLFPAG*SVFVVISTKSR Trigger: TCTAGATTTAGTACTGATTACCACAAACACAGACAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
3UTR CAA 72 bp | ACTGGTGATTATTCCCCCTTTAAATTGCTCAGACGCTaGGACGGTATCAAATTTTCGAGGTGTAATTCCATG | + |
Preference number: 4 (lower is better) Translates to: TGDYSPFKLLRR*DGIKFSRCNSM Trigger: CATGGAATTACACCTCGAAAATTTGATACCGTCCAAGCGTCTGAGCAATTTAAAGGGGGAATAATCACCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
3UTR CAA 72 bp | GAATTAGGAACTTTCCTTGACTTATACTCTTCTTCCTaGGTGATACTACTGGAGTTGACAGACAATGCTGGG | + |
Preference number: 4 (lower is better) Translates to: ELGTFLDLYSSS*VILLELTDNAG Trigger: CCCAGCATTGTCTGTCAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAAGTCAAGGAAAGTTCCTAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
CDS-3UTR TCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAACTTGTGCTGCTGAAGTaGCTTGCAATCTCATTGTAC | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQRELVLLK*LAISLY Trigger: GTACAATGAGATTGCAAGTCACTTCAGCAGCACAAG...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR TCA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGTATGTCTTGTGCTGCTaGAGTGACTTGCAATCTCAT | + |
Preference number: 4 (lower is better) Translates to: TILKRHVRGTYVYEVRQRYVLCC*SDLQSH Trigger: ATGAGATTGCAAGTCACTTCAGCAGCACAAGACATA...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | GCATTTATGATCACCACACACACCATGTTTACTTATTTGTTCGCTTGTACCAGCAAGACACTGCTTGGATaGCTTCATGTTTCAGCAACA | + |
Preference number: 4 (lower is better) Translates to: AFMITTHTMFTYLFACTSKTLLG*LHVSAT Trigger: TGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTT...GCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATCATAAATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR GCA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGAGTGGGATAAGACACTaGTTGGATGCCTTCATGTTT | + |
Preference number: 4 (lower is better) Translates to: TILKRHVRGTYVYEVRQRSGIRH*LDAFMF Trigger: AAACATGAAGGCATCCAAGCAGTGTCTTATCCCACT...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 ENSMUST00000212358.2 |
||
CDS-3UTR GCA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGTCTTCAAATGCAGAATaGGTGTCAATATGGGCAGGA | + |
Preference number: 4 (lower is better) Translates to: TILKRHVRGTYVYEVRQRSSNAE*VSIWAG Trigger: TCCTGCCCATATTGACACGCATTCTGCATTTGAAGA...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGTGACACCCTCTGGATaGTTGAAATCCATAACAATC | + |
Preference number: 4 (lower is better) Translates to: TILKRHVRGTYVYEVRQRVTPSG*LKSITI Trigger: GATTGTTATGGATTTCAAGCATCCAGAGGGTGTCAC...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAATTCCCCCTTTAAATTaGTCAGACGCTTGGACGGTA | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQREIPPLN*SDAWTV Trigger: TACCGTCCAAGCGTCTGAGCAATTTAAAGGGGGAAT...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGCTGCTGAAGTGACTTaGAATCTCATTGTACACTTG | + |
Preference number: 4 (lower is better) Translates to: TILKRHVRGTYVYEVRQRAAEVT*NLIVHL Trigger: CAAGTGTACAATGAGATTGCAAGTCACTTCAGCAGC...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | GCATTTATGATCACCACACACACCATGTTTACTTATTTGTTCGCTTGTACCAGCTACTGTGACACCCTCTaGATGCTTGAAATCCATAAC | + |
Preference number: 4 (lower is better) Translates to: AFMITTHTMFTYLFACTSYCDTL*MLEIHN Trigger: GTTATGGATTTCAAGCATCCAGAGGGTGTCACAGTA...GCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATCATAAATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CCA 90 bp | TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTAATGAAACACAGGACTTaGGTCAGGACATCCTGCTAC | + |
Preference number: 4 (lower is better) Translates to: SIHLHPNLFYLFTTSLLVMKHRT*VRTSCY Trigger: GTAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCAT...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CCA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTACATCACCCACAGCCTaGCATGAAGCTTCCAATTCT | + |
Preference number: 4 (lower is better) Translates to: HKLMSNTILKRHVRGTYVTSPTA*HEASNS Trigger: AGAATTGGAAGCTTCATGCCAGGCTGTGGGTGATGT...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTAACATCACCCACAGCCTaGCATGAAGCTTCCAATTCT | + |
Preference number: 4 (lower is better) Translates to: SIHLHPNLFYLFTTSLLVTSPTA*HEASNS Trigger: AGAATTGGAAGCTTCATGCCAGGCTGTGGGTGATGT...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR TCA 90 bp | GCATTTATGATCACCACACACACCATGTTTACTTATTTGTTCGCTTGTACCAGCATCTCATTGTACACTTaGTGGACATGCTTTTGCTCT | + |
Preference number: 4 (lower is better) Translates to: AFMITTHTMFTYLFACTSISLYT*WTCFCS Trigger: AGAGCAAAAGCATGTCCATCAAGTGTACAATGAGAT...GCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATCATAAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR TCA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGATCTCATTGTACACTTaGTGGACATGCTTTTGCTCT | + |
Preference number: 4 (lower is better) Translates to: TILKRHVRGTYVYEVRQRISLYT*WTCFCS Trigger: AGAGCAAAAGCATGTCCATCAAGTGTACAATGAGAT...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR TCA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTACCCCCTCAGGCGTTTaGTTTACTAGAAATTCTTCC | + |
Preference number: 4 (lower is better) Translates to: HKLMSNTILKRHVRGTYVTPSGV*FTRNSS Trigger: GGAAGAATTTCTAGTAAATCAAACGCCTGAGGGGGT...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR TCA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGAGCACATCTTGGGAATaGAAGCAGGTCCTATTTATA | + |
Preference number: 4 (lower is better) Translates to: TILKRHVRGTYVYEVRQRSTSWE*KQVLFI Trigger: TATAAATAGGACCTGCTTTCATTCCCAAGATGTGCT...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAAAGACACTGCTTGGATaGCTTCATGTTTCAGCAACA | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQREKTLLG*LHVSAT Trigger: TGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTT...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 ENSMUST00000212358.2 |
||
CDS-3UTR GCA 90 bp | TTCTGGCTAAAGTGTTTCTGGGCAGGCATCCAGAATGTAATAGCAAGATGCAGTCTTTATCCACAGTGTTaGTCTCATAGTGAAATTCAT | + |
Preference number: 4 (lower is better) Translates to: FWLKCFWAGIQNVIARCSLYPQC*SHSEIH Trigger: ATGAATTTCACTATGAGAGCAACACTGTGGATAAAG...ACTGCATCTTGCTATTACATTCTGGATGCCTGCCCAGAAACACTTTAGCCAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR GCA 90 bp | ATGACAAACATAGGTTCTTCAATTCATCTACACCCCAACCTCTTTTACTTGTTTTCTCCAAAATGCTACTaGAAACCTCAGGAAGACCCC | + |
Preference number: 4 (lower is better) Translates to: MTNIGSSIHLHPNLFYLFSPKCY*KPQEDP Trigger: GGGGTCTTCCTGAGGTTTGCAGTAGCATTTTGGAGA...AAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGAAGAACCTATGTTTGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR GCA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTGCGCATTCCCCTCTTaGTTAAAGTCAAGTCTCCAA | + |
Preference number: 4 (lower is better) Translates to: HKLMSNTILKRHVRGTYVCAFPS*LKSSLQ Trigger: TTGGAGACTTGACTTTAAGCAAGAGGGGAATGCGCA...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAATCAGCAACACATGCCTaGCTTTACTCTGTTTCCTTA | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQRESATHA*LYSVSL Trigger: TAAGGAAACAGAGTAAAGCCAGGCATGTGTTGCTGA...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 ENSMUST00000212358.2 |
||
CDS-3UTR CCA 90 bp | GAGAGAAATAATCTCATCTTCAAATGCAGAATGCGTGTCAATATGGGCAGGAATTCAGCAACACATGCCTaGCTTTACTCTGTTTCCTTA | + |
Preference number: 4 (lower is better) Translates to: ERNNLIFKCRMRVNMGRNSATHA*LYSVSL Trigger: TAAGGAAACAGAGTAAAGCCAGGCATGTGTTGCTGA...ATTCCTGCCCATATTGACACGCATTCTGCATTTGAAGATGAGATTATTTCTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212358.2 ENSMUST00000212817.2 |
||
CDS-3UTR CCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAATACTGTGACACCCTCTaGATGCTTGAAATCCATAAC | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQREYCDTL*MLEIHN Trigger: GTTATGGATTTCAAGCATCCAGAGGGTGTCACAGTA...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | GCATTTATGATCACCACACACACCATGTTTACTTATTTGTTCGCTTGTACCAGCAATTGCTCAGACGCTTaGACGGTATCAAATTTTCGA | + |
Preference number: 4 (lower is better) Translates to: AFMITTHTMFTYLFACTSNCSDA*TVSNFR Trigger: TCGAAAATTTGATACCGTCCAAGCGTCTGAGCAATT...GCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATCATAAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CCA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTCACTATGGAACCACTTaGCAAAGCTTTCAGGAACTC | + |
Preference number: 4 (lower is better) Translates to: HKLMSNTILKRHVRGTYVHYGTT*QSFQEL Trigger: GAGTTCCTGAAAGCTTTGCCAAGTGGTTCCATAGTG...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAACACTATGGAACCACTTaGCAAAGCTTTCAGGAACTC | + |
Preference number: 4 (lower is better) Translates to: TPSSSDTSLLSRNIHFIKHYGTT*QSFQEL Trigger: GAGTTCCTGAAAGCTTTGCCAAGTGGTTCCATAGTG...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
3UTR CAA 72 bp | TGGCTACGATCACACCCAATCATATATAAGTCCTTGTaGATGCCAAGGTATTTTCCATTTCCACATCCGATA | + |
Preference number: 4 (lower is better) Translates to: WLRSHPIIYKSL*MPRYFPFPHPI Trigger: TATCGGATGTGGAAATGGAAAATACCTTGGCATCAACAAGGACTTATATATGATTGGGTGTGATCGTAGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
CDS-3UTR TCA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTCGAGGTGTAATTCCATaGGTCCAAAGGTATCTAGAT | + |
Preference number: 4 (lower is better) Translates to: HKLMSNTILKRHVRGTYVRGVIP*VQRYLD Trigger: ATCTAGATACCTTTGGACTCATGGAATTACACCTCG...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR TCA 90 bp | TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTATATGTCTTGTGCTGCTaGAGTGACTTGCAATCTCAT | + |
Preference number: 4 (lower is better) Translates to: SIHLHPNLFYLFTTSLLVYVLCC*SDLQSH Trigger: ATGAGATTGCAAGTCACTTCAGCAGCACAAGACATA...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR TCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAAGCACATCTTGGGAATaGAAGCAGGTCCTATTTATA | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQRESTSWE*KQVLFI Trigger: TATAAATAGGACCTGCTTTCATTCCCAAGATGTGCT...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTAAGACACTGCTTGGATaGCTTCATGTTTCAGCAACA | + |
Preference number: 4 (lower is better) Translates to: HKLMSNTILKRHVRGTYVKTLLG*LHVSAT Trigger: TGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTT...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 ENSMUST00000212358.2 |
||
CDS-3UTR GCA 90 bp | ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAAAGTGGGATAAGACACTaGTTGGATGCCTTCATGTTT | + |
Preference number: 4 (lower is better) Translates to: TPSSSDTSLLSRNIHFIKSGIRH*LDAFMF Trigger: AAACATGAAGGCATCCAAGCAGTGTCTTATCCCACT...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTAGTGGGATAAGACACTaGTTGGATGCCTTCATGTTT | + |
Preference number: 4 (lower is better) Translates to: HKLMSNTILKRHVRGTYVSGIRH*LDAFMF Trigger: AAACATGAAGGCATCCAAGCAGTGTCTTATCCCACT...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 ENSMUST00000212358.2 |
||
CDS-3UTR GCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAACAACTTCTCCAAAATaGTACTGCAAACCTCAGGAA | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQRETTSPK*YCKPQE Trigger: TTCCTGAGGTTTGCAGTAGCATTTTGGAGAAGTTGT...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 |
||
CDS-3UTR GCA 90 bp | TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTAGTGACACCCTCTGGATaGTTGAAATCCATAACAATC | + |
Preference number: 4 (lower is better) Translates to: SIHLHPNLFYLFTTSLLVVTPSG*LKSITI Trigger: GATTGTTATGGATTTCAAGCATCCAGAGGGTGTCAC...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR GCA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTGTGACACCCTCTGGATaGTTGAAATCCATAACAATC | + |
Preference number: 4 (lower is better) Translates to: HKLMSNTILKRHVRGTYVVTPSG*LKSITI Trigger: GATTGTTATGGATTTCAAGCATCCAGAGGGTGTCAC...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTGCTGCTGAAGTGACTTaGAATCTCATTGTACACTTG | + |
Preference number: 4 (lower is better) Translates to: HKLMSNTILKRHVRGTYVAAEVT*NLIVHL Trigger: CAAGTGTACAATGAGATTGCAAGTCACTTCAGCAGC...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAAGCTGCTGAAGTGACTTaGAATCTCATTGTACACTTG | + |
Preference number: 4 (lower is better) Translates to: TPSSSDTSLLSRNIHFIKAAEVT*NLIVHL Trigger: CAAGTGTACAATGAGATTGCAAGTCACTTCAGCAGC...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTATCAGCAACACATGCCTaGCTTTACTCTGTTTCCTTA | + |
Preference number: 4 (lower is better) Translates to: SIHLHPNLFYLFTTSLLVSATHA*LYSVSL Trigger: TAAGGAAACAGAGTAAAGCCAGGCATGTGTTGCTGA...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAATCCTGCTACACCAGATaGTTCAATAGCTTTGTCTTT | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQRESCYTR*FNSFVF Trigger: AAAGACAAAGCTATTGAACCATCTGGTGTAGCAGGA...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | ATGACAAACATAGGTTCTTCAATTCATCTACACCCCAACCTCTTTTACTTGTTTAAGACACTGCTTGGATaGCTTCATGTTTCAGCAACA | + |
Preference number: 4 (lower is better) Translates to: MTNIGSSIHLHPNLFYLFKTLLG*LHVSAT Trigger: TGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTT...AAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGAAGAACCTATGTTTGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR GCA 90 bp | GGAACTTTCCTTGACTTATACTCTTCTTCCTTGGTGATACTACTGGAGTTGACACTTTATCCACAGTGTTaGTCTCATAGTGAAATTCAT | + |
Preference number: 4 (lower is better) Translates to: GTFLDLYSSSLVILLELTLYPQC*SHSEIH Trigger: ATGAATTTCACTATGAGAGCAACACTGTGGATAAAG...TGTCAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAAGTCAAGGAAAGTTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
CDS-3UTR CCA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGTATTACAAATGCATATaGCTTATTAGGTGGCATGAG | + |
Preference number: 4 (lower is better) Translates to: TILKRHVRGTYVYEVRQRYYKCI*LIRWHE Trigger: CTCATGCCACCTAATAAGCCATATGCATTTGTAATA...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 ENSMUST00000212358.2 |
||
CDS-3UTR CCA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTAATTGCTCAGACGCTTaGACGGTATCAAATTTTCGA | + |
Preference number: 4 (lower is better) Translates to: HKLMSNTILKRHVRGTYVNCSDA*TVSNFR Trigger: TCGAAAATTTGATACCGTCCAAGCGTCTGAGCAATT...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTCCTGCTACACCAGATaGTTCAATAGCTTTGTCTTT | + |
Preference number: 4 (lower is better) Translates to: HKLMSNTILKRHVRGTYVSCYTR*FNSFVF Trigger: AAAGACAAAGCTATTGAACCATCTGGTGTAGCAGGA...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAACTTTATCCACAGTGTTaGTCTCATAGTGAAATTCAT | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQRELYPQC*SHSEIH Trigger: ATGAATTTCACTATGAGAGCAACACTGTGGATAAAG...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 ENSMUST00000212358.2 |
||
CDS-3UTR CCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAATATTACAAATGCATATaGCTTATTAGGTGGCATGAG | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQREYYKCI*LIRWHE Trigger: CTCATGCCACCTAATAAGCCATATGCATTTGTAATA...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 ENSMUST00000212358.2 |
||
CDS-3UTR CCA 90 bp | ATGACAAACATAGGTTCTTCAATTCATCTACACCCCAACCTCTTTTACTTGTTTAATTGCTCAGACGCTTaGACGGTATCAAATTTTCGA | + |
Preference number: 4 (lower is better) Translates to: MTNIGSSIHLHPNLFYLFNCSDA*TVSNFR Trigger: TCGAAAATTTGATACCGTCCAAGCGTCTGAGCAATT...AAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGAAGAACCTATGTTTGTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CCA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAATCATCTTTATCTCCTTaGCTAATTCTCTTTCCTCTA | + |
Preference number: 4 (lower is better) Translates to: ILKRHVRGTYVYEVRQRESSLSP*LILFPL Trigger: TAGAGGAAAGAGAATTAGCCAAGGAGATAAAGATGA...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR GCA 90 bp | ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAACTTTATCCACAGTGTTaGTCTCATAGTGAAATTCAT | + |
Preference number: 4 (lower is better) Translates to: TPSSSDTSLLSRNIHFIKLYPQC*SHSEIH Trigger: ATGAATTTCACTATGAGAGCAACACTGTGGATAAAG...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CCA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATTACAAATGCATATaGCTTATTAGGTGGCATGAG | + |
Preference number: 4 (lower is better) Translates to: HKLMSNTILKRHVRGTYVYYKCI*LIRWHE Trigger: CTCATGCCACCTAATAAGCCATATGCATTTGTAATA...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 ENSMUST00000212358.2 |
||
3UTR CAA 72 bp | GGTTCTTCAATTCATCTACACCCCAACCTCTTTTACTaGTTTACAACTTCACTCCTAGTATTTAATACTACT | + |
Preference number: 4 (lower is better) Translates to: GSSIHLHPNLFY*FTTSLLVFNTT Trigger: AGTAGTATTAAATACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGAAGAACC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CCA 90 bp | ATGACAAACATAGGTTCTTCAATTCATCTACACCCCAACCTCTTTTACTTGTTTTATTACAAATGCATATaGCTTATTAGGTGGCATGAG | + |
Preference number: 4 (lower is better) Translates to: MTNIGSSIHLHPNLFYLFYYKCI*LIRWHE Trigger: CTCATGCCACCTAATAAGCCATATGCATTTGTAATA...AAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGAAGAACCTATGTTTGTCAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CAA 90 bp | CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGAGGGATAAGACACTGCTaGGATGCCTTCATGTTTCAG | + |
Preference number: 5 (lower is better) Translates to: QAGLELRNSPASASRVLGGIRHC*DAFMFQ Trigger: CTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCC...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGAAAATTGCTCAGACGCTaGGACGGTATCAAATTTTCG | + |
Preference number: 5 (lower is better) Translates to: QAGLELRNSPASASRVLGKLLRR*DGIKFS Trigger: CGAAAATTTGATACCGTCCAAGCGTCTGAGCAATTT...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTATACTCTTCTTCCTaGGTGATACTACTGGAGTTG | + |
Preference number: 5 (lower is better) Translates to: QAGLELRNSPASASRVLGLYSSS*VILLEL Trigger: CAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAA...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATGGTTCAATAGCTTaGTCTTTACCAGGGTTTCTT | + |
Preference number: 5 (lower is better) Translates to: TRLALNSEIRLPLPPECWDGSIA*SLPGFL Trigger: AAGAAACCCTGGTAAAGACAAAGCTATTGAACCATC...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | CCCTTCTTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTTGGTGATACTACTGGAGTaGACAGACAATGCTGGGTCT | + |
Preference number: 5 (lower is better) Translates to: PFLKVSSLGTSFLFPAGLVILLE*TDNAGS Trigger: AGACCCAGCATTGTCTGTCAACTCCAGTAGTATCAC...CAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS CCA 90 bp | CCTGGAGGTAAGGCTTCAAGGCCCATGTTTTTCCATTGTGCTGAGTaGGATAAGACACTGCTTGGATGCCTTCATGTTTCAGCAACACAT | + |
Preference number: 5 (lower is better) Translates to: PGGKASRPMFFHCAE*DKTLLGCLHVSATH Trigger: ATGTGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCCACTCAGCACAATGGAAAAACATGGGCCTTGAAGCCTTACCTCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212817.2 |
||
CDS GCA 90 bp | CTTCAAGGCCCATGTTTTTCCATTGTGCTGAGTGGGATAAGACACTaGTTGGATGCCTTCATGTTTCAGCAACACATGCCTGGCTTTACT | + |
Preference number: 5 (lower is better) Translates to: LQGPCFSIVLSGIRH*LDAFMFQQHMPGFT Trigger: AGTAAAGCCAGGCATGTGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCCACTCAGCACAATGGAAAAACATGGGCCTTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212817.2 |
||
CDS-3UTR CAA 90 bp | CCAAGATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTGCGATGAAACACAGGACTaGGGTCAGGACATCCTGCTA | + |
Preference number: 5 (lower is better) Translates to: PRCKLGRKGFIQLTLPYCDETQD*GQDILL Trigger: TAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCATC...GCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCATCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
CDS-3UTR CAA 90 bp | CCAAGATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTGCGTGATACTACTGGAGTaGACAGACAATGCTGGGTCT | + |
Preference number: 5 (lower is better) Translates to: PRCKLGRKGFIQLTLPYCVILLE*TDNAGS Trigger: AGACCCAGCATTGTCTGTCAACTCCAGTAGTATCAC...GCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCATCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
CDS-3UTR CAA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGGGAACCAGCACATCTaGGGAATGAAAGCAGGTCCT | + |
Preference number: 5 (lower is better) Translates to: TILKRHVRGTYVYEVRQRGNQHI*GMKAGP Trigger: AGGACCTGCTTTCATTCCCAAGATGTGCTGGTTCCC...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGTTACCAGGGTTTCTTTaGAGGTGCCAGGGAACCAGC | + |
Preference number: 5 (lower is better) Translates to: TILKRHVRGTYVYEVRQRLPGFL*RCQGTS Trigger: GCTGGTTCCCTGGCACCTCAAAAGAAACCCTGGTAA...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS GCA 90 bp | GGGCAGGAATTCCCCCAGGTAAGGGCTTGTCTTTATCCACAGTGTTaGTCTCATAGTGAAATTCATAGCCAAAATGTTTCACTCTTCTGT | + |
Preference number: 5 (lower is better) Translates to: GQEFPQVRACLYPQC*SHSEIHSQNVSLFC Trigger: ACAGAAGAGTGAAACATTTTGGCTATGAATTTCACTATGAGAGCAACACTGTGGATAAAGACAAGCCCTTACCTGGGGGAATTCCTGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212294.2 |
||
CDS CCA 90 bp | CTGAGAGAAATAATCTCATCTTCAAATGCAGAATGCGTGTCAATATaGGCAGGAATTCCCCCAGGTAAGGGCTTGTCTTTATCCACAGTG | + |
Preference number: 5 (lower is better) Translates to: LREIISSSNAECVSI*AGIPPGKGLSLSTV Trigger: CACTGTGGATAAAGACAAGCCCTTACCTGGGGGAATTCCTGCCCATATTGACACGCATTCTGCATTTGAAGATGAGATTATTTCTCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGGGATAAGACACTGCTaGGATGCCTTCATGTTTCAG | + |
Preference number: 5 (lower is better) Translates to: TILKRHVRGTYVYEVRQRGIRHC*DAFMFQ Trigger: CTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCC...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 ENSMUST00000212358.2 |
||
CDS-3UTR CAA 90 bp | GGAACTTTCCTTGACTTATACTCTTCTTCCTTGGTGATACTACTGGAGTTGACAGGGATAAGACACTGCTaGGATGCCTTCATGTTTCAG | + |
Preference number: 5 (lower is better) Translates to: GTFLDLYSSSLVILLELTGIRHC*DAFMFQ Trigger: CTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCC...TGTCAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAAGTCAAGGAAAGTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
CDS-3UTR CAA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGTGATACTACTGGAGTaGACAGACAATGCTGGGTCT | + |
Preference number: 5 (lower is better) Translates to: TILKRHVRGTYVYEVRQRVILLE*TDNAGS Trigger: AGACCCAGCATTGTCTGTCAACTCCAGTAGTATCAC...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATAAAACCCTTATACTCTTCTTCCTaGGTGATACTACTGGAGTTG | + |
Preference number: 5 (lower is better) Translates to: DVTGLLPLACLACFHIKPLYSSS*VILLEL Trigger: CAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAA...GGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
CDS-3UTR CAA 90 bp | TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTAGGGAACCAGCACATCTaGGGAATGAAAGCAGGTCCT | + |
Preference number: 5 (lower is better) Translates to: SIHLHPNLFYLFTTSLLVGNQHI*GMKAGP Trigger: AGGACCTGCTTTCATTCCCAAGATGTGCTGGTTCCC...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CAA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTGGGAACCAGCACATCTaGGGAATGAAAGCAGGTCCT | + |
Preference number: 5 (lower is better) Translates to: HKLMSNTILKRHVRGTYVGNQHI*GMKAGP Trigger: AGGACCTGCTTTCATTCCCAAGATGTGCTGGTTCCC...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAAGGGAACCAGCACATCTaGGGAATGAAAGCAGGTCCT | + |
Preference number: 5 (lower is better) Translates to: TPSSSDTSLLSRNIHFIKGNQHI*GMKAGP Trigger: AGGACCTGCTTTCATTCCCAAGATGTGCTGGTTCCC...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTTACCAGGGTTTCTTTaGAGGTGCCAGGGAACCAGC | + |
Preference number: 5 (lower is better) Translates to: HKLMSNTILKRHVRGTYVLPGFL*RCQGTS Trigger: GCTGGTTCCCTGGCACCTCAAAAGAAACCCTGGTAA...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAGATGAAACACAGGACTaGGGTCAGGACATCCTGCTA | + |
Preference number: 5 (lower is better) Translates to: ILKRHVRGTYVYEVRQREDETQD*GQDILL Trigger: TAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCATC...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | TTCTGGCTAAAGTGTTTCTGGGCAGGCATCCAGAATGTAATAGCAAGATGCAGTAATCTCATTGTACACTaGATGGACATGCTTTTGCTC | + |
Preference number: 5 (lower is better) Translates to: FWLKCFWAGIQNVIARCSNLIVH*MDMLLL Trigger: GAGCAAAAGCATGTCCATCAAGTGTACAATGAGATT...ACTGCATCTTGCTATTACATTCTGGATGCCTGCCCAGAAACACTTTAGCCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CAA 90 bp | CCAAGATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTGCAATCTCATTGTACACTaGATGGACATGCTTTTGCTC | + |
Preference number: 5 (lower is better) Translates to: PRCKLGRKGFIQLTLPYCNLIVH*MDMLLL Trigger: GAGCAAAAGCATGTCCATCAAGTGTACAATGAGATT...GCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCATCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211933.2 |
||
CDS-3UTR CAA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTGATGAAACACAGGACTaGGGTCAGGACATCCTGCTA | + |
Preference number: 5 (lower is better) Translates to: HKLMSNTILKRHVRGTYVDETQD*GQDILL Trigger: TAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCATC...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTAGGGATAAGACACTGCTaGGATGCCTTCATGTTTCAG | + |
Preference number: 5 (lower is better) Translates to: SIHLHPNLFYLFTTSLLVGIRHC*DAFMFQ Trigger: CTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCC...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CAA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTGGGATAAGACACTGCTaGGATGCCTTCATGTTTCAG | + |
Preference number: 5 (lower is better) Translates to: HKLMSNTILKRHVRGTYVGIRHC*DAFMFQ Trigger: CTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCC...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 ENSMUST00000212358.2 |
||
CDS-3UTR CAA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGCAAAGTCAAAAGCAGTaGTTTCCTACTCACGCCATT | + |
Preference number: 5 (lower is better) Translates to: TILKRHVRGTYVYEVRQRQSQKQ*FPTHAI Trigger: AATGGCGTGAGTAGGAAACAACTGCTTTTGACTTTG...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 ENSMUST00000212358.2 |
||
CDS-3UTR CAA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGAAATTGCTCAGACGCTaGGACGGTATCAAATTTTCG | + |
Preference number: 5 (lower is better) Translates to: TILKRHVRGTYVYEVRQRKLLRR*DGIKFS Trigger: CGAAAATTTGATACCGTCCAAGCGTCTGAGCAATTT...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | GCATTTATGATCACCACACACACCATGTTTACTTATTTGTTCGCTTGTACCAGCAAATTGCTCAGACGCTaGGACGGTATCAAATTTTCG | + |
Preference number: 5 (lower is better) Translates to: AFMITTHTMFTYLFACTSKLLRR*DGIKFS Trigger: CGAAAATTTGATACCGTCCAAGCGTCTGAGCAATTT...GCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATCATAAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CAA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAACAAAGTCAAAAGCAGTaGTTTCCTACTCACGCCATT | + |
Preference number: 5 (lower is better) Translates to: ILKRHVRGTYVYEVRQREQSQKQ*FPTHAI Trigger: AATGGCGTGAGTAGGAAACAACTGCTTTTGACTTTG...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 ENSMUST00000212358.2 |
||
CDS-3UTR CAA 90 bp | TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTAACACCCTCTGGATGCTaGAAATCCATAACAATCGCT | + |
Preference number: 5 (lower is better) Translates to: SIHLHPNLFYLFTTSLLVTPSGC*KSITIA Trigger: AGCGATTGTTATGGATTTCAAGCATCCAGAGGGTGT...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CAA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTACACCCTCTGGATGCTaGAAATCCATAACAATCGCT | + |
Preference number: 5 (lower is better) Translates to: HKLMSNTILKRHVRGTYVTPSGC*KSITIA Trigger: AGCGATTGTTATGGATTTCAAGCATCCAGAGGGTGT...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAAACACCCTCTGGATGCTaGAAATCCATAACAATCGCT | + |
Preference number: 5 (lower is better) Translates to: TPSSSDTSLLSRNIHFIKTPSGC*KSITIA Trigger: AGCGATTGTTATGGATTTCAAGCATCCAGAGGGTGT...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGATGGTTCAATAGCTTaGTCTTTACCAGGGTTTCTT | + |
Preference number: 5 (lower is better) Translates to: TILKRHVRGTYVYEVRQRDGSIA*SLPGFL Trigger: AAGAAACCCTGGTAAAGACAAAGCTATTGAACCATC...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS CCA 90 bp | TGCTTTCTTGGATTCTTCAATAGTTTGGAATATTACAAATGCATATaGCTTATTAGGTGGCATGAGGAGAGCTTCCACAGGTCCACATTT | + |
Preference number: 5 (lower is better) Translates to: CFLGFFNSLEYYKCI*LIRWHEESFHRSTF Trigger: AAATGTGGACCTGTGGAAGCTCTCCTCATGCCACCTAATAAGCCATATGCATTTGTAATATTCCAAACTATTGAAGAATCCAAGAAAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212154.2 ENSMUST00000212294.2 ENSMUST00000212358.2 |
||
CDS-3UTR CAA 90 bp | ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAACAAAGTCAAAAGCAGTaGTTTCCTACTCACGCCATT | + |
Preference number: 5 (lower is better) Translates to: TPSSSDTSLLSRNIHFIKQSQKQ*FPTHAI Trigger: AATGGCGTGAGTAGGAAACAACTGCTTTTGACTTTG...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTCAAAGTCAAAAGCAGTaGTTTCCTACTCACGCCATT | + |
Preference number: 5 (lower is better) Translates to: HKLMSNTILKRHVRGTYVQSQKQ*FPTHAI Trigger: AATGGCGTGAGTAGGAAACAACTGCTTTTGACTTTG...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 ENSMUST00000212358.2 |
||
CDS-3UTR CAA 90 bp | ATGACAAACATAGGTTCTTCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACACCCTCTGGATGCTaGAAATCCATAACAATCGCT | + |
Preference number: 5 (lower is better) Translates to: MTNIGSSIHLHPNLFYLFTPSGC*KSITIA Trigger: AGCGATTGTTATGGATTTCAAGCATCCAGAGGGTGT...AAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGAAGAACCTATGTTTGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CAA 90 bp | ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAAAAATTGCTCAGACGCTaGGACGGTATCAAATTTTCG | + |
Preference number: 5 (lower is better) Translates to: TPSSSDTSLLSRNIHFIKKLLRR*DGIKFS Trigger: CGAAAATTTGATACCGTCCAAGCGTCTGAGCAATTT...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAATTATACTCTTCTTCCTaGGTGATACTACTGGAGTTG | + |
Preference number: 5 (lower is better) Translates to: ILKRHVRGTYVYEVRQRELYSSS*VILLEL Trigger: CAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAA...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAGATGGTTCAATAGCTTaGTCTTTACCAGGGTTTCTT | + |
Preference number: 5 (lower is better) Translates to: ILKRHVRGTYVYEVRQREDGSIA*SLPGFL Trigger: AAGAAACCCTGGTAAAGACAAAGCTATTGAACCATC...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS GCA 90 bp | AAAATATGCTTTCTTGGATTCTTCAATAGTTTGGAATATTACAAATaGATATGGCTTATTAGGTGGCATGAGGAGAGCTTCCACAGGTCC | + |
Preference number: 5 (lower is better) Translates to: KICFLGFFNSLEYYK*IWLIRWHEESFHRS Trigger: GGACCTGTGGAAGCTCTCCTCATGCCACCTAATAAGCCATATGCATTTGTAATATTCCAAACTATTGAAGAATCCAAGAAAGCATATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212154.2 ENSMUST00000212294.2 ENSMUST00000212358.2 |
||
CDS-3UTR CAA 90 bp | CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTAATCTCATTGTACACTaGATGGACATGCTTTTGCTC | + |
Preference number: 5 (lower is better) Translates to: HKLMSNTILKRHVRGTYVNLIVH*MDMLLL Trigger: GAGCAAAAGCATGTCCATCAAGTGTACAATGAGATT...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS-3UTR CAA 90 bp | TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTATTATACTCTTCTTCCTaGGTGATACTACTGGAGTTG | + |
Preference number: 5 (lower is better) Translates to: SIHLHPNLFYLFTTSLLVLYSSS*VILLEL Trigger: CAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAA...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 |
||
CDS-3UTR CAA 90 bp | ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAAGATGGTTCAATAGCTTaGTCTTTACCAGGGTTTCTT | + |
Preference number: 5 (lower is better) Translates to: TPSSSDTSLLSRNIHFIKDGSIA*SLPGFL Trigger: AAGAAACCCTGGTAAAGACAAAGCTATTGAACCATC...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053407.13 ENSMUST00000211933.2 ENSMUST00000212294.2 |
||
CDS CAA 90 bp | CAAGGCCCATGTTTTTCCATTGTGCTGAGTGGGATAAGACACTGCTaGGATGCCTTCATGTTTCAGCAACACATGCCTGGCTTTACTCTG | + |
Preference number: 6 (lower is better) Translates to: QGPCFSIVLSGIRHC*DAFMFQQHMPGFTL Trigger: CAGAGTAAAGCCAGGCATGTGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCCACTCAGCACAATGGAAAAACATGGGCCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212817.2 |
||
CDS GCA 72 bp | ATTGGCAATAACCAGGCTCTGAGTGGGATAAGACACTaGTTGGATGCCTTCATGTTTCAGCAACACATGCCT | + |
Preference number: 6 (lower is better) Translates to: IGNNQALSGIRH*LDAFMFQQHMP Trigger: AGGCATGTGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCCACTCAGAGCCTGGTTATTGCCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212154.2 ENSMUST00000212294.2 ENSMUST00000212358.2 |
||
CDS GCA 72 bp | CCATGTTTTTCCATTGTGCTGAGTGGGATAAGACACTaGTTGGATGCCTTCATGTTTCAGCAACACATGCCT | + |
Preference number: 6 (lower is better) Translates to: PCFSIVLSGIRH*LDAFMFQQHMP Trigger: AGGCATGTGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCCACTCAGCACAATGGAAAAACATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212817.2 |
||
CDS GCA 72 bp | GACACTGCTTGGATGCCTTCATGTTTCAGCAACACATaGCTGGCTTTACTCTGTTTCCTTAAGAACTTCTTT | + |
Preference number: 6 (lower is better) Translates to: DTAWMPSCFSNT*LALLCFLKNFF Trigger: AAAGAAGTTCTTAAGGAAACAGAGTAAAGCCAGGCATGTGTTGCTGAAACATGAAGGCATCCAAGCAGTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212154.2 ENSMUST00000212294.2 ENSMUST00000212358.2 ENSMUST00000212817.2 |
||
CDS CCA 72 bp | CTGCTTGGATGCCTTCATGTTTCAGCAACACATGCCTaGCTTTACTCTGTTTCCTTAAGAACTTCTTTTCCA | + |
Preference number: 6 (lower is better) Translates to: LLGCLHVSATHA*LYSVSLRTSFP Trigger: TGGAAAAGAAGTTCTTAAGGAAACAGAGTAAAGCCAGGCATGTGTTGCTGAAACATGAAGGCATCCAAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000053407.13 ENSMUST00000165105.2 ENSMUST00000211933.2 ENSMUST00000212154.2 ENSMUST00000212294.2 ENSMUST00000212358.2 ENSMUST00000212817.2 |
||
CDS CCA 72 bp | ATAATCTCATCTTCAAATGCAGAATGCGTGTCAATATaGGCAGGAATTCCCCCAGGTAAGGGCTTGTCTTTA | + |
Preference number: 6 (lower is better) Translates to: IISSSNAECVSI*AGIPPGKGLSL Trigger: TAAAGACAAGCCCTTACCTGGGGGAATTCCTGCCCATATTGACACGCATTCTGCATTTGAAGATGAGATTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212294.2 |
||
CDS GCA 72 bp | AACCCCCAGGTAAGGGCTTGTCTTTATCCACAGTGTTaGTCTCATAGTGAAATTCATAGCCAAAATGTTTCA | + |
Preference number: 6 (lower is better) Translates to: NPQVRACLYPQC*SHSEIHSQNVS Trigger: TGAAACATTTTGGCTATGAATTTCACTATGAGAGCAACACTGTGGATAAAGACAAGCCCTTACCTGGGGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212358.2 |
||
CDS GCA 72 bp | TTCCCCCAGGTAAGGGCTTGTCTTTATCCACAGTGTTaGTCTCATAGTGAAATTCATAGCCAAAATGTTTCA | + |
Preference number: 6 (lower is better) Translates to: FPQVRACLYPQC*SHSEIHSQNVS Trigger: TGAAACATTTTGGCTATGAATTTCACTATGAGAGCAACACTGTGGATAAAGACAAGCCCTTACCTGGGGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212294.2 |