RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALKBH8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025899

Ensembl transcript IDs: ENSMUST00000053407.13, ENSMUST00000165105.2, ENSMUST00000211933.2, ENSMUST00000212154.2, ENSMUST00000212294.2, ENSMUST00000212358.2, ENSMUST00000212817.2

Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTTATTCAGAGGCAATaGAGGGATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGC +
Preference number: 1 (lower is better)
Translates to: LELKQVRKQELIQRQ*RDVTGLLPLACLAC
Trigger: GCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTGCCTCTGAATAAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR TCA 90 bp ACAATGCTCTGGCCACTCCTTGAACCCGTGTGTCTGCCAATGTTTTaGCAGTTCCTGGAACCCATGTGTGTGCCCACTGATGAAGCCCAT +
Preference number: 1 (lower is better)
Translates to: TMLWPLLEPVCLPMF*QFLEPMCVPTDEAH
Trigger: ATGGGCTTCATCAGTGGGCACACACATGGGTTCCAGGAACTGTCAAAACATTGGCAGACACACGGGTTCAAGGAGTGGCCAGAGCATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR GCA 90 bp TCTCAGGAGACGGGCAAGTTCTTGGAGAGCTTCCACTCTGCGCTCTaGAGTTGCAAAGTGGTGAATGACGGCAATAGAGATGCAAGCATC +
Preference number: 1 (lower is better)
Translates to: SQETGKFLESFHSAL*SCKVVNDGNRDASI
Trigger: GATGCTTGCATCTCTATTGCCGTCATTCACCACTTTGCAACTGCAGAGCGCAGAGTGGAAGCTCTCCAAGAACTTGCCCGTCTCCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR GCA 90 bp CAATGGAGGGATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTaGTTTCATATAAAACCCAAGACTGCCAGTCCAGGGATGGCACCA +
Preference number: 1 (lower is better)
Translates to: QWRDVTGLLPLACLA*FHIKPKTASPGMAP
Trigger: TGGTGCCATCCCTGGACTGGCAGTCTTGGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR GCA 90 bp AATAGAGTTACACAATGCTCTGGCCACTCCTTGAACCCGTGTGTCTaGCAATGTTTTGACAGTTCCTGGAACCCATGTGTGTGCCCACTG +
Preference number: 1 (lower is better)
Translates to: NRVTQCSGHSLNPCV*QCFDSSWNPCVCPL
Trigger: CAGTGGGCACACACATGGGTTCCAGGAACTGTCAAAACATTGGCAGACACACGGGTTCAAGGAGTGGCCAGAGCATTGTGTAACTCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR GCA 90 bp ATTCAGAGGCAATGGAGGGATGTTACTGGCTTGCTTCCCCTGGCTTaGTTAGCTTGCTTTCATATAAAACCCAAGACTGCCAGTCCAGGG +
Preference number: 1 (lower is better)
Translates to: IQRQWRDVTGLLPLA*LACFHIKPKTASPG
Trigger: CCCTGGACTGGCAGTCTTGGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTGCCTCTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR TCA 90 bp GAGAATCAGGGTTCCGGTACTCAGTTGGGCAAGGAGTCAGCAGGGTaGCAAACAGCAGAGAAAGTGTTGGATCTGAATGTAATGTCTCAA +
Preference number: 1 (lower is better)
Translates to: ENQGSGTQLGKESAG*QTAEKVLDLNVMSQ
Trigger: TTGAGACATTACATTCAGATCCAACACTTTCTCTGCTGTTTGTCACCCTGCTGACTCCTTGCCCAACTGAGTACCGGAACCCTGATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR GCA 90 bp TGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTaGTCTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTC +
Preference number: 1 (lower is better)
Translates to: CKLGRKGFIQLTLPY*SSSPRKSGLELKQV
Trigger: GACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAAGAGCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CCA 90 bp AGCTTACACTTCCATATTGCTCTTCATCACCAAGGAAGTCAGGACTaGAACTCAAGCAGGTCAGGAAGCAGGAGCTTATTCAGAGGCAAT +
Preference number: 1 (lower is better)
Translates to: SLHFHIALHHQGSQD*NSSRSGSRSLFRGN
Trigger: ATTGCCTCTGAATAAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAAGAGCAATATGGAAGTGTAAGCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CCA 90 bp ACGATGAAACACAGGACTTGGGTCAGGACATCCTGCTACACCAGATaGTTCAATAGCTTTGTCTTTACCAGGGTTTCTTTTGAGGTGCCA +
Preference number: 1 (lower is better)
Translates to: TMKHRTWVRTSCYTR*FNSFVFTRVSFEVP
Trigger: TGGCACCTCAAAAGAAACCCTGGTAAAGACAAAGCTATTGAACCATCTGGTGTAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCATCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR TCA 90 bp TCAGGAACTCTACTATGCGTGGCCATGGGCTATGTCTTGTGCTGCTaGAGTGACTTGCAATCTCATTGTACACTTGATGGACATGCTTTT +
Preference number: 1 (lower is better)
Translates to: SGTLLCVAMGYVLCC*SDLQSHCTLDGHAF
Trigger: AAAAGCATGTCCATCAAGTGTACAATGAGATTGCAAGTCACTTCAGCAGCACAAGACATAGCCCATGGCCACGCATAGTAGAGTTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR TCA 90 bp GAGTTGACAGACAATGCTGGGTCTTCATTGACCCCCTCAGGCGTTTaGTTTACTAGAAATTCTTCCGTAGATGTGGCACTGTTTAGCTCA +
Preference number: 1 (lower is better)
Translates to: ELTDNAGSSLTPSGV*FTRNSSVDVALFSS
Trigger: TGAGCTAAACAGTGCCACATCTACGGAAGAATTTCTAGTAAATCAAACGCCTGAGGGGGTCAATGAAGACCCAGCATTGTCTGTCAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR GCA 90 bp CCTCAGGAAGACCCCCAGGTAAGGGCTTGTCTTTATCCACAGTGTTaGTCTCATAGTGAAATTCATAGCCAAAATGTTTCACTCTTCTGT +
Preference number: 1 (lower is better)
Translates to: PQEDPQVRACLYPQC*SHSEIHSQNVSLFC
Trigger: ACAGAAGAGTGAAACATTTTGGCTATGAATTTCACTATGAGAGCAACACTGTGGATAAAGACAAGCCCTTACCTGGGGGTCTTCCTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212817.2
3UTR CCA 90 bp AAGTGGATATATATAGGTTCTGGGGACTCAGGGTGTCAGGATTGGTaGCACATTCCTGTACCAATTAAGCCATTTCACTGGTCTACATGT +
Preference number: 1 (lower is better)
Translates to: KWIYIGSGDSGCQDW*HIPVPIKPFHWSTC
Trigger: ACATGTAGACCAGTGAAATGGCTTAATTGGTACAGGAATGTGCCACCAATCCTGACACCCTGAGTCCCCAGAACCTATATATATCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CCA 90 bp AACAAGACAAATTTACTTAAGGTTAGACATAGCTATGAAGGTGTGTaGGAAGTCCTCAAGGGAGGCTCACAGCTGCCACCAGATTATGAC +
Preference number: 1 (lower is better)
Translates to: NKTNLLKVRHSYEGV*EVLKGGSQLPPDYD
Trigger: GTCATAATCTGGTGGCAGCTGTGAGCCTCCCTTGAGGACTTCCCACACACCTTCATAGCTATGTCTAACCTTAAGTAAATTTGTCTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR TCA 90 bp AGGCCTTGCAGGGTCAATGGACATATTTCTTCCTATACTTTTGACTaGCACCCCAGGATGCCCTTTCAAAGGAGAAGAAATGATGGAAAT +
Preference number: 1 (lower is better)
Translates to: RPCRVNGHISSYTFD*HPRMPFQRRRNDGN
Trigger: ATTTCCATCATTTCTTCTCCTTTGAAAGGGCATCCTGGGGTGTCAGTCAAAAGTATAGGAAGAAATATGTCCATTGACCCTGCAAGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR TCA 90 bp ATCGTAATAGCTCTGCAGAATGCTAACATCACCCACAGCCTGGCATaGAGCTTCCAATTCTCCATCACAGAAAACATGGTAATAACGATG +
Preference number: 1 (lower is better)
Translates to: IVIALQNANITHSLA*SFQFSITENMVITM
Trigger: CATCGTTATTACCATGTTTTCTGTGATGGAGAATTGGAAGCTTCATGCCAGGCTGTGGGTGATGTTAGCATTCTGCAGAGCTATTACGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR GCA 90 bp AAACTCCGACGAGGTAACATAACTTGTACTGTGACACCCTCTGGATaGTTGAAATCCATAACAATCGCTGACCCCAAACTGAGAGAAATA +
Preference number: 1 (lower is better)
Translates to: KLRRGNITCTVTPSG*LKSITIADPKLREI
Trigger: TATTTCTCTCAGTTTGGGGTCAGCGATTGTTATGGATTTCAAGCATCCAGAGGGTGTCACAGTACAAGTTATGTTACCTCGTCGGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212358.2
ENSMUST00000212817.2
3UTR GCA 90 bp AACATGGTAATAACGATGAAACACAGGACTTGGGTCAGGACATCCTaGTACACCAGATGGTTCAATAGCTTTGTCTTTACCAGGGTTTCT +
Preference number: 1 (lower is better)
Translates to: NMVITMKHRTWVRTS*YTRWFNSFVFTRVS
Trigger: AGAAACCCTGGTAAAGACAAAGCTATTGAACCATCTGGTGTAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCATCGTTATTACCATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR CCA 90 bp TTCTCCATCACAGAAAACATGGTAATAACGATGAAACACAGGACTTaGGTCAGGACATCCTGCTACACCAGATGGTTCAATAGCTTTGTC +
Preference number: 1 (lower is better)
Translates to: FSITENMVITMKHRT*VRTSCYTRWFNSFV
Trigger: GACAAAGCTATTGAACCATCTGGTGTAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCATCGTTATTACCATGTTTTCTGTGATGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR TCA 90 bp TACTGCAAACCTCAGGAAGACCTTATTTTTCATGTACTTGTGTCTTaGCTGACCCATCACATGAGCTTAGATATGGAGACTTTCCACTGG +
Preference number: 1 (lower is better)
Translates to: YCKPQEDLIFHVLVS*LTHHMSLDMETFHW
Trigger: CCAGTGGAAAGTCTCCATATCTAAGCTCATGTGATGGGTCAGTCAAGACACAAGTACATGAAAAATAAGGTCTTCCTGAGGTTTGCAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR TCA 90 bp CAAGGTTCTGGCTACGATCACACCCAATCATATATAAGTCCTTGTTaGTGCCAAGGTATTTTCCATTTCCACATCCGATATCTGCCACTA +
Preference number: 1 (lower is better)
Translates to: QGSGYDHTQSYISPC*CQGIFHFHIRYLPL
Trigger: TAGTGGCAGATATCGGATGTGGAAATGGAAAATACCTTGGCATCAACAAGGACTTATATATGATTGGGTGTGATCGTAGCCAGAACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR CCA 90 bp GAGCGAGGGGTTCCTCTCGGAGTCTTTCATTATGATCAGTCAACGTaGCTAACTTGCTTACTTGGAAACTTGAATTCACAAGAACAATAT +
Preference number: 1 (lower is better)
Translates to: ERGVPLGVFHYDQST*LTCLLGNLNSQEQY
Trigger: ATATTGTTCTTGTGAATTCAAGTTTCCAAGTAAGCAAGTTAGCCACGTTGACTGATCATAATGAAAGACTCCGAGAGGAACCCCTCGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CCA 90 bp TACAGCGTAAATGTTCCACAACCTCCCCAAATAGCACCACCAACCTaGGACCAAGTAGTTAAATACACAAACTGTGGGTCATTTTTCATT +
Preference number: 1 (lower is better)
Translates to: YSVNVPQPPQIAPPT*DQVVKYTNCGSFFI
Trigger: AATGAAAAATGACCCACAGTTTGTGTATTTAACTACTTGGTCCCAGGTTGGTGGTGCTATTTGGGGAGGTTGTGGAACATTTACGCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR TCA 90 bp TTGTACTGTGACACCCTCTGGATGCTTGAAATCCATAACAATCGCTaGCCCCAAACTGAGAGAAATAATCTCATCTTCAAATGCAGAATG +
Preference number: 1 (lower is better)
Translates to: LYCDTLWMLEIHNNR*PQTERNNLIFKCRM
Trigger: CATTCTGCATTTGAAGATGAGATTATTTCTCTCAGTTTGGGGTCAGCGATTGTTATGGATTTCAAGCATCCAGAGGGTGTCACAGTACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212358.2
ENSMUST00000212817.2
3UTR GCA 90 bp AAAGTCAAGTCTCCAATGTCACTGGTGATTATTCCCCCTTTAAATTaGTCAGACGCTTGGACGGTATCAAATTTTCGAGGTGTAATTCCA +
Preference number: 1 (lower is better)
Translates to: KVKSPMSLVIIPPLN*SDAWTVSNFRGVIP
Trigger: TGGAATTACACCTCGAAAATTTGATACCGTCCAAGCGTCTGAGCAATTTAAAGGGGGAATAATCACCAGTGACATTGGAGACTTGACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR TCA 90 bp TATATGTCAAATCTTTCCTTGGAGGTTCTTATAATAAAACGATACTaGAGGAAAGCACACAAATCCGTTCACCGACTGATGCAAGGACAA +
Preference number: 1 (lower is better)
Translates to: YMSNLSLEVLIIKRY*RKAHKSVHRLMQGQ
Trigger: TTGTCCTTGCATCAGTCGGTGAACGGATTTGTGTGCTTTCCTTCAGTATCGTTTTATTATAAGAACCTCCAAGGAAAGATTTGACATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CAA 90 bp GCAATGGAGGGATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTaGCTTTCATATAAAACCCAAGACTGCCAGTCCAGGGATGGCACC +
Preference number: 2 (lower is better)
Translates to: AMEGCYWLASPGLLS*LSYKTQDCQSRDGT
Trigger: GGTGCCATCCCTGGACTGGCAGTCTTGGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CAA 90 bp GGACTTGGGTCAGGACATCCTGCTACACCAGATGGTTCAATAGCTTaGTCTTTACCAGGGTTTCTTTTGAGGTGCCAGGGAACCAGCACA +
Preference number: 2 (lower is better)
Translates to: GLGSGHPATPDGSIA*SLPGFLLRCQGTST
Trigger: TGTGCTGGTTCCCTGGCACCTCAAAAGAAACCCTGGTAAAGACAAAGCTATTGAACCATCTGGTGTAGCAGGATGTCCTGACCCAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR CAA 90 bp ATGTATTTAGCTGGACATGGTGGCACTTGCCTTCAATTCCAGCACTaGGCAGAGACAGGCAGGTTTCTGTGGGTTCAAGAACAGCCTGTT +
Preference number: 2 (lower is better)
Translates to: MYLAGHGGTCLQFQH*AETGRFLWVQEQPV
Trigger: AACAGGCTGTTCTTGAACCCACAGAAACCTGCCTGTCTCTGCCAAGTGCTGGAATTGAAGGCAAGTGCCACCATGTCCAGCTAAATACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CAA 90 bp TATTCAGAGGCAATGGAGGGATGTTACTGGCTTGCTTCCCCTGGCTaGCTTAGCTTGCTTTCATATAAAACCCAAGACTGCCAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: YSEAMEGCYWLASPG*LSLLSYKTQDCQSR
Trigger: CCTGGACTGGCAGTCTTGGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTGCCTCTGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR-3UTR CCA 90 bp ATGCAAGCATCACAAGACCCACTTCTGACAGGAACAGCCAGCGCATCGCAGACTTACTGTGACACCCTCTaGATGCTTGAAATCCATAAC +
Preference number: 2 (lower is better)
Translates to: MQASQDPLLTGTASASQTYCDTL*MLEIHN
Trigger: GTTATGGATTTCAAGCATCCAGAGGGTGTCACAGTA...AGTCTGCGATGCGCTGGCTGTTCCTGTCAGAAGTGGGTCTTGTGATGCTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR-3UTR TCA 90 bp ACGATGAAACACAGGACTTGGGTCAGGACATCCTGCTACACCAGATGGTTCAATCATGTACTTGTGTCTTaGCTGACCCATCACATGAGC +
Preference number: 2 (lower is better)
Translates to: TMKHRTWVRTSCYTRWFNHVLVS*LTHHMS
Trigger: GCTCATGTGATGGGTCAGTCAAGACACAAGTACATG...ATTGAACCATCTGGTGTAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCATCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR-3UTR CCA 90 bp CCAAGATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTGCATGGAGGGATGTTACTaGCTTGCTTCCCCTGGCTTG +
Preference number: 2 (lower is better)
Translates to: PRCKLGRKGFIQLTLPYCMEGCY*LASPGL
Trigger: CAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCAT...GCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCATCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR-3UTR TCA 90 bp GGAACTTTCCTTGACTTATACTCTTCTTCCTTGGTGATACTACTGGAGTTGACACACAAGACCCACTTCTaGCAGGAACAGCCAGCGCAT +
Preference number: 2 (lower is better)
Translates to: GTFLDLYSSSLVILLELTHKTHF*QEQPAH
Trigger: ATGCGCTGGCTGTTCCTGTCAGAAGTGGGTCTTGTG...TGTCAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAAGTCAAGGAAAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR-3UTR GCA 90 bp GCTTTCAGGAACTCTACTATGCGTGGCCATGGGCTATGTCTTGTGCTGCTGAAGACAACTTCTCCAAAATaGTACTGCAAACCTCAGGAA +
Preference number: 2 (lower is better)
Translates to: AFRNSTMRGHGLCLVLLKTTSPK*YCKPQE
Trigger: TTCCTGAGGTTTGCAGTAGCATTTTGGAGAAGTTGT...CTTCAGCAGCACAAGACATAGCCCATGGCCACGCATAGTAGAGTTCCTGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR-3UTR GCA 90 bp TCCAATGCTTCTTTACTGCTCTCTGTAAGGGATGGAGGTGTGGCCTTCCTTTGTTGCGCATTCCCCTCTTaGTTAAAGTCAAGTCTCCAA +
Preference number: 2 (lower is better)
Translates to: SNASLLLSVRDGGVAFLCCAFPS*LKSSLQ
Trigger: TTGGAGACTTGACTTTAAGCAAGAGGGGAATGCGCA...ACAAAGGAAGGCCACACCTCCATCCCTTACAGAGAGCAGTAAAGAAGCATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR-3UTR CCA 90 bp GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATAAAACCCACAGGCAGGTTTCTGTaGGTTCAAGAACAGCCTGTT +
Preference number: 2 (lower is better)
Translates to: DVTGLLPLACLACFHIKPTGRFL*VQEQPV
Trigger: AACAGGCTGTTCTTGAACCCACAGAAACCTGCCTGT...GGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CAA 90 bp ATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATaGCTCTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGT +
Preference number: 2 (lower is better)
Translates to: MQVGEERVYSAYTSI*LFITKEVRTGTQAG
Trigger: ACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAAGAGCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR-3UTR TCA 90 bp TGTTTTGACAGTTCCTGGAACCCATGTGTGTGCCCACTGATGAAGCCCATTGCCTGCTTTTGGTTTCACTaGCTAGATAAAAATGCAACC +
Preference number: 2 (lower is better)
Translates to: CFDSSWNPCVCPLMKPIACFWFH*LDKNAT
Trigger: GGTTGCATTTTTATCTAGTCAGTGAAACCAAAAGCA...GGCAATGGGCTTCATCAGTGGGCACACACATGGGTTCCAGGAACTGTCAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR-3UTR CCA 90 bp CCCTTCTTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTTGTTACTGAGAATCTTCTaGCTAAAGTGTTTCTGGGCA +
Preference number: 2 (lower is better)
Translates to: PFLKVSSLGTSFLFPAGLLLRIF*LKCFWA
Trigger: TGCCCAGAAACACTTTAGCCAGAAGATTCTCAGTAA...CAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
3UTR CAA 90 bp CTCCGACGAGGTAACATAACTTGTACTGTGACACCCTCTGGATGCTaGAAATCCATAACAATCGCTGACCCCAAACTGAGAGAAATAATC +
Preference number: 2 (lower is better)
Translates to: LRRGNITCTVTPSGC*KSITIADPKLREII
Trigger: GATTATTTCTCTCAGTTTGGGGTCAGCGATTGTTATGGATTTCAAGCATCCAGAGGGTGTCACAGTACAAGTTATGTTACCTCGTCGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212358.2
ENSMUST00000212817.2
3UTR-3UTR TCA 90 bp GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATAAAACCCAGAAACAGCCAACTGTaGCTGCAAGAACAATGTTTG +
Preference number: 2 (lower is better)
Translates to: DVTGLLPLACLACFHIKPRNSQL*LQEQCL
Trigger: CAAACATTGTTCTTGCAGTCACAGTTGGCTGTTTCT...GGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR-3UTR TCA 90 bp GGTGGCACATTCCTGTACCAATTAAGCCATTTCACTGGTCTACATGTTCCTTTAACATTCCTAATGCTGTaGCCCTTCAATGTTGTGGCG +
Preference number: 2 (lower is better)
Translates to: GGTFLYQLSHFTGLHVPLTFLML*PFNVVA
Trigger: CGCCACAACATTGAAGGGTCACAGCATTAGGAATGT...TAAAGGAACATGTAGACCAGTGAAATGGCTTAATTGGTACAGGAATGTGCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR-3UTR GCA 90 bp CACCTGCACCAGACTCTTTCCTTGTACCCCTCCCATACCCATTTCTTGAGAATAACAGCCAACTGTGACTaGAAGAACAATGTTTGGTTT +
Preference number: 2 (lower is better)
Translates to: HLHQTLSLYPSHTHFLRITANCD*KNNVWF
Trigger: AAACCAAACATTGTTCTTGCAGTCACAGTTGGCTGT...TATTCTCAAGAAATGGGTATGGGAGGGGTACAAGGAAAGAGTCTGGTGCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR-3UTR GCA 90 bp AAACTCCGACGAGGTAACATAACTTGTACTGTGACACCCTCTGGATGCTTGAAACATTTCATTGTCCGATaGAGATTCAGACTGGGCACA +
Preference number: 2 (lower is better)
Translates to: KLRRGNITCTVTPSGCLKHFIVR*RFRLGT
Trigger: TGTGCCCAGTCTGAATCTGCATCGGACAATGAAATG...TTTCAAGCATCCAGAGGGTGTCACAGTACAAGTTATGTTACCTCGTCGGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212817.2
3UTR-3UTR GCA 90 bp GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATAAAACCCACTGATGAAGCCCATTaGCAGGTGTTTGTGATATTG +
Preference number: 2 (lower is better)
Translates to: DVTGLLPLACLACFHIKPTDEAH*QVFVIL
Trigger: CAATATCACAAACACCTGGCAATGGGCTTCATCAGT...GGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CAA 90 bp CATTTAGGCCTTGCAGGGTCAATGGACATATTTCTTCCTATACTTTaGACTGACACCCCAGGATGCCCTTTCAAAGGAGAAGAAATGATG +
Preference number: 2 (lower is better)
Translates to: HLGLAGSMDIFLPIL*TDTPGCPFKGEEMM
Trigger: CATCATTTCTTCTCCTTTGAAAGGGCATCCTGGGGTGTCAGTCAAAAGTATAGGAAGAAATATGTCCATTGACCCTGCAAGGCCTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR-3UTR CCA 90 bp TTTGACCCCCAAAGGGGTCATGACCTACAGGTTGAGAACTGCTGCTTTAATATAGTTCTTGTTTCCTGCTaGTTTGTCTGTGTTTGTGGT +
Preference number: 2 (lower is better)
Translates to: FDPQRGHDLQVENCCFNIVLVSC*FVCVCG
Trigger: ACCACAAACACAGACAAACCAGCAGGAAACAAGAAC...TATATTAAAGCAGCAGTTCTCAACCTGTAGGTCATGACCCCTTTGGGGGTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CAA 90 bp TTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTaGTCTGTGTTTGTGGTAATCAGTACTAAATCTAGAGCTTCAATG +
Preference number: 2 (lower is better)
Translates to: LKVSSLGTSFLFPAG*SVFVVISTKSRASM
Trigger: CATTGAAGCTCTAGATTTAGTACTGATTACCACAAACACAGACAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
3UTR CAA 90 bp CTACTGCAAACCTCAGGAAGACCTTATTTTTCATGTACTTGTGTCTaGACTGACCCATCACATGAGCTTAGATATGGAGACTTTCCACTG +
Preference number: 2 (lower is better)
Translates to: LLQTSGRPYFSCTCV*TDPSHELRYGDFPL
Trigger: CAGTGGAAAGTCTCCATATCTAAGCTCATGTGATGGGTCAGTCAAGACACAAGTACATGAAAAATAAGGTCTTCCTGAGGTTTGCAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR CAA 90 bp TCCAATGTCACTGGTGATTATTCCCCCTTTAAATTGCTCAGACGCTaGGACGGTATCAAATTTTCGAGGTGTAATTCCATGAGTCCAAAG +
Preference number: 2 (lower is better)
Translates to: SNVTGDYSPFKLLRR*DGIKFSRCNSMSPK
Trigger: CTTTGGACTCATGGAATTACACCTCGAAAATTTGATACCGTCCAAGCGTCTGAGCAATTTAAAGGGGGAATAATCACCAGTGACATTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR CAA 90 bp GGGAGTTCAGAATTAGGAACTTTCCTTGACTTATACTCTTCTTCCTaGGTGATACTACTGGAGTTGACAGACAATGCTGGGTCTTCATTG +
Preference number: 2 (lower is better)
Translates to: GSSELGTFLDLYSSS*VILLELTDNAGSSL
Trigger: CAATGAAGACCCAGCATTGTCTGTCAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAAGTCAAGGAAAGTTCCTAATTCTGAACTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR-3UTR GCA 90 bp GAGAGAAATAATCTCATCTTCAAATGCAGAATGCGTGTCAATATGGGCAGGAATTCTCCAAAATGCTACTaGAAACCTCAGGAAGACCCC +
Preference number: 2 (lower is better)
Translates to: ERNNLIFKCRMRVNMGRNSPKCY*KPQEDP
Trigger: GGGGTCTTCCTGAGGTTTGCAGTAGCATTTTGGAGA...ATTCCTGCCCATATTGACACGCATTCTGCATTTGAAGATGAGATTATTTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212817.2
3UTR-3UTR CCA 90 bp CCAAGATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTGCTGTGATATTGTTTGCTaGGGAAGAGTGGGAAAATCT +
Preference number: 2 (lower is better)
Translates to: PRCKLGRKGFIQLTLPYCCDIVC*GRVGKS
Trigger: AGATTTTCCCACTCTTCCCCAGCAAACAATATCACA...GCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCATCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CAA 90 bp TCAAAGGTGTGCGCCACCACACCCAGCTCTTCAGATACTTCCTTATaGTCCAGGAATATTCACTTCATTAAAATCTCACATAATTGCTTC +
Preference number: 2 (lower is better)
Translates to: SKVCATTPSSSDTSL*SRNIHFIKISHNCF
Trigger: GAAGCAATTATGTGAGATTTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGTGGTGGCGCACACCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
3UTR-3UTR TCA 90 bp GGAACTTTCCTTGACTTATACTCTTCTTCCTTGGTGATACTACTGGAGTTGACACGAGGTGTAATTCCATaGGTCCAAAGGTATCTAGAT +
Preference number: 2 (lower is better)
Translates to: GTFLDLYSSSLVILLELTRGVIP*VQRYLD
Trigger: ATCTAGATACCTTTGGACTCATGGAATTACACCTCG...TGTCAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAAGTCAAGGAAAGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR-3UTR GCA 90 bp GGAACTTTCCTTGACTTATACTCTTCTTCCTTGGTGATACTACTGGAGTTGACATCTCCAAAATGCTACTaGAAACCTCAGGAAGACCTT +
Preference number: 2 (lower is better)
Translates to: GTFLDLYSSSLVILLELTSPKCY*KPQEDL
Trigger: AAGGTCTTCCTGAGGTTTGCAGTAGCATTTTGGAGA...TGTCAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAAGTCAAGGAAAGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR-3UTR GCA 90 bp GTAGATGTGGCACTGTTTAGCTCATCTTTATCTCCTTGGCTAATTCTCTTTCCTGCTGCTGAAGTGACTTaGAATCTCATTGTACACTTG +
Preference number: 2 (lower is better)
Translates to: VDVALFSSSLSPWLILFPAAEVT*NLIVHL
Trigger: CAAGTGTACAATGAGATTGCAAGTCACTTCAGCAGC...AGGAAAGAGAATTAGCCAAGGAGATAAAGATGAGCTAAACAGTGCCACATCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR-3UTR CCA 90 bp GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATAAAACCCGCTAACTTGCTTACTTaGAAACTTGAATTCACAAGA +
Preference number: 2 (lower is better)
Translates to: DVTGLLPLACLACFHIKPANLLT*KLEFTR
Trigger: TCTTGTGAATTCAAGTTTCCAAGTAAGCAAGTTAGC...GGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR-3UTR GCA 90 bp GAAATAATCTCATCTTCAAATGCAGAATGCGTGTCAATATGGGCAGGAATTCCTACAACTTCTCCAAAATaGTACTGCAAACCTCAGGAA +
Preference number: 2 (lower is better)
Translates to: EIISSSNAECVSIWAGIPTTSPK*YCKPQE
Trigger: TTCCTGAGGTTTGCAGTAGCATTTTGGAGAAGTTGT...AGGAATTCCTGCCCATATTGACACGCATTCTGCATTTGAAGATGAGATTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212817.2
3UTR-3UTR CCA 90 bp TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTATTACTGAGAATCTTCTaGCTAAAGTGTTTCTGGGCA +
Preference number: 2 (lower is better)
Translates to: SIHLHPNLFYLFTTSLLVLLRIF*LKCFWA
Trigger: TGCCCAGAAACACTTTAGCCAGAAGATTCTCAGTAA...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
3UTR CCA 72 bp CCCTTTCCTCACGAGGTTGACTCCTCTACCCCTGTGTaGGATATGAGTTGTCCCCAGAGCTCTGGCTTTCCC +
Preference number: 3 (lower is better)
Translates to: PFPHEVDSSTPV*DMSCPQSSGFP
Trigger: GGGAAAGCCAGAGCTCTGGGGACAACTCATATCCCACACAGGGGTAGAGGAGTCAACCTCGTGAGGAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR GCA 72 bp GGCTTGCTTAGCTTGCTTTCATATAAAACCCAAGACTaGCAGTCCAGGGATGGCACCACCCCCTGCCAGTCC +
Preference number: 3 (lower is better)
Translates to: GLLSLLSYKTQD*QSRDGTTPCQS
Trigger: GGACTGGCAGGGGGTGGTGCCATCCCTGGACTGGCAGTCTTGGGTTTTATATGAAAGCAAGCTAAGCAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CCA 72 bp AAGCAGGTCAGGAAGCAGGAGCTTATTCAGAGGCAATaGAGGGATGTTACTGGCTTGCTTCCCCTGGCTTGC +
Preference number: 3 (lower is better)
Translates to: KQVRKQELIQRQ*RDVTGLLPLAC
Trigger: GCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTGCCTCTGAATAAGCTCCTGCTTCCTGACCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR TCA 72 bp TGGCCACTCCTTGAACCCGTGTGTCTGCCAATGTTTTaGCAGTTCCTGGAACCCATGTGTGTGCCCACTGAT +
Preference number: 3 (lower is better)
Translates to: WPLLEPVCLPMF*QFLEPMCVPTD
Trigger: ATCAGTGGGCACACACATGGGTTCCAGGAACTGTCAAAACATTGGCAGACACACGGGTTCAAGGAGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR-3UTR CAA 90 bp CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATCAGATACTTCCTTATaGTCCAGGAATATTCACTTC +
Preference number: 3 (lower is better)
Translates to: QAGLELRNSPASASRVLGSDTSL*SRNIHF
Trigger: GAAGTGAATATTCCTGGACAATAAGGAAGTATCTGA...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
3UTR-3UTR CAA 90 bp CACCTGCACCAGACTCTTTCCTTGTACCCCTCCCATACCCATTTCTTGAGAATAACCAGCCATCCCTTCTaGAAGGTCAGCTCCCTAGGT +
Preference number: 3 (lower is better)
Translates to: HLHQTLSLYPSHTHFLRITSHPF*KVSSLG
Trigger: ACCTAGGGAGCTGACCTTCAAGAAGGGATGGCTGGT...TATTCTCAAGAAATGGGTATGGGAGGGGTACAAGGAAAGAGTCTGGTGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR GCA 72 bp ACACAATGCTCTGGCCACTCCTTGAACCCGTGTGTCTaGCAATGTTTTGACAGTTCCTGGAACCCATGTGTG +
Preference number: 3 (lower is better)
Translates to: TQCSGHSLNPCV*QCFDSSWNPCV
Trigger: CACACATGGGTTCCAGGAACTGTCAAAACATTGGCAGACACACGGGTTCAAGGAGTGGCCAGAGCATTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR GCA 72 bp TGCCTCAGAATGGCGTCCAAGCTTTTGGGCCAGTCATaGAGTTTCCACAGGAATAGGTGTGGCACAGTTAGA +
Preference number: 3 (lower is better)
Translates to: CLRMASKLLGQS*SFHRNRCGTVR
Trigger: TCTAACTGTGCCACACCTATTCCTGTGGAAACTGCATGACTGGCCCAAAAGCTTGGACGCCATTCTGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CCA 72 bp GCAGGAGCTTATTCAGAGGCAATGGAGGGATGTTACTaGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCA +
Preference number: 3 (lower is better)
Translates to: AGAYSEAMEGCY*LASPGLLSLLS
Trigger: TGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTGCCTCTGAATAAGCTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR-3UTR CAA 90 bp ATGCAAGCATCACAAGACCCACTTCTGACAGGAACAGCCAGCGCATCGCAGACTACACCCTCTGGATGCTaGAAATCCATAACAATCGCT +
Preference number: 3 (lower is better)
Translates to: MQASQDPLLTGTASASQTTPSGC*KSITIA
Trigger: AGCGATTGTTATGGATTTCAAGCATCCAGAGGGTGT...AGTCTGCGATGCGCTGGCTGTTCCTGTCAGAAGTGGGTCTTGTGATGCTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR TCA 72 bp GGTTCCGGTACTCAGTTGGGCAAGGAGTCAGCAGGGTaGCAAACAGCAGAGAAAGTGTTGGATCTGAATGTA +
Preference number: 3 (lower is better)
Translates to: GSGTQLGKESAG*QTAEKVLDLNV
Trigger: TACATTCAGATCCAACACTTTCTCTGCTGTTTGTCACCCTGCTGACTCCTTGCCCAACTGAGTACCGGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR TCA 72 bp AGAGCTTCCACTCTGCGCTCTGCAGTTGCAAAGTGGTaGATGACGGCAATAGAGATGCAAGCATCACAAGAC +
Preference number: 3 (lower is better)
Translates to: RASTLRSAVAKW*MTAIEMQASQD
Trigger: GTCTTGTGATGCTTGCATCTCTATTGCCGTCATTCACCACTTTGCAACTGCAGAGCGCAGAGTGGAAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR GCA 72 bp CACACACACACACACACACACTTACAAACTTCAGCCTaGTGTGATGGTACATGTAACCCCAGGACTGGAGAG +
Preference number: 3 (lower is better)
Translates to: HTHTHTHLQTSA*CDGTCNPRTGE
Trigger: CTCTCCAGTCCTGGGGTTACATGTACCATCACAGCAGGCTGAAGTTTGTAAGTGTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR GCA 72 bp GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTaGTTTCATATAAAACCCAAGACTGCCAGTCCAGGG +
Preference number: 3 (lower is better)
Translates to: DVTGLLPLACLA*FHIKPKTASPG
Trigger: CCCTGGACTGGCAGTCTTGGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR GCA 72 bp AAGTTCTTGGAGAGCTTCCACTCTGCGCTCTGCAGTTaGAAAGTGGTGAATGACGGCAATAGAGATGCAAGC +
Preference number: 3 (lower is better)
Translates to: KFLESFHSALCS*KVVNDGNRDAS
Trigger: GCTTGCATCTCTATTGCCGTCATTCACCACTTTGCAACTGCAGAGCGCAGAGTGGAAGCTCTCCAAGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR-3UTR CAA 90 bp CACCTGCACCAGACTCTTTCCTTGTACCCCTCCCATACCCATTTCTTGAGAATACTTCAATTCCAGCACTaGGCAGAGACAGGCAGGTTT +
Preference number: 3 (lower is better)
Translates to: HLHQTLSLYPSHTHFLRILQFQH*AETGRF
Trigger: AAACCTGCCTGTCTCTGCCAAGTGCTGGAATTGAAG...TATTCTCAAGAAATGGGTATGGGAGGGGTACAAGGAAAGAGTCTGGTGCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR GCA 72 bp CACCGACTGATGCAAGGACAAAGTTTGGAGCATTCGTaGTATGGGATGCCAAGACTCCAGGAGACTAAGTTT +
Preference number: 3 (lower is better)
Translates to: HRLMQGQSLEHS*YGMPRLQETKF
Trigger: AAACTTAGTCTCCTGGAGTCTTGGCATCCCATAGCACGAATGCTCCAAACTTTGTCCTTGCATCAGTCGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR GCA 72 bp CAATGGAGGGATGTTACTGGCTTGCTTCCCCTGGCTTaGTTAGCTTGCTTTCATATAAAACCCAAGACTGCC +
Preference number: 3 (lower is better)
Translates to: QWRDVTGLLPLA*LACFHIKPKTA
Trigger: GGCAGTCTTGGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR TCA 72 bp AGTCCATCATGGCACCAGATTTCTATAGTAGGAAGCTaGGCGATCACATCTCATCCACATACACGAAGCAGG +
Preference number: 3 (lower is better)
Translates to: SPSWHQISIVGS*AITSHPHTRSR
Trigger: CCTGCTTCGTGTATGTGGATGAGATGTGATCGCTCAGCTTCCTACTATAGAAATCTGGTGCCATGATGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR TCA 72 bp CTACTATGCGTGGCCATGGGCTATGTCTTGTGCTGCTaGAGTGACTTGCAATCTCATTGTACACTTGATGGA +
Preference number: 3 (lower is better)
Translates to: LLCVAMGYVLCC*SDLQSHCTLDG
Trigger: TCCATCAAGTGTACAATGAGATTGCAAGTCACTTCAGCAGCACAAGACATAGCCCATGGCCACGCATAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR TCA 72 bp GACAATGCTGGGTCTTCATTGACCCCCTCAGGCGTTTaGTTTACTAGAAATTCTTCCGTAGATGTGGCACTG +
Preference number: 3 (lower is better)
Translates to: DNAGSSLTPSGV*FTRNSSVDVAL
Trigger: CAGTGCCACATCTACGGAAGAATTTCTAGTAAATCAAACGCCTGAGGGGGTCAATGAAGACCCAGCATTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR GCA 72 bp TTCTTCCTTGGTGATACTACTGGAGTTGACAGACAATaGTGGGTCTTCATTGACCCCCTCAGGCGTTTGATT +
Preference number: 3 (lower is better)
Translates to: FFLGDTTGVDRQ*WVFIDPLRRLI
Trigger: AATCAAACGCCTGAGGGGGTCAATGAAGACCCAGCATTGTCTGTCAACTCCAGTAGTATCACCAAGGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR CCA 72 bp TATATAGGTTCTGGGGACTCAGGGTGTCAGGATTGGTaGCACATTCCTGTACCAATTAAGCCATTTCACTGG +
Preference number: 3 (lower is better)
Translates to: YIGSGDSGCQDW*HIPVPIKPFHW
Trigger: CCAGTGAAATGGCTTAATTGGTACAGGAATGTGCCACCAATCCTGACACCCTGAGTCCCCAGAACCTATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CCA 72 bp AATAAAGCCTCATGTGGTCTCTCATGGAATCAAGCTTaGTCTCTCATGAGTTCTAGGGGGTCCACTACTGTC +
Preference number: 3 (lower is better)
Translates to: NKASCGLSWNQA*SLMSSRGSTTV
Trigger: GACAGTAGTGGACCCCCTAGAACTCATGAGAGACCAAGCTTGATTCCATGAGAGACCACATGAGGCTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CCA 72 bp TTCCATATTGCTCTTCATCACCAAGGAAGTCAGGACTaGAACTCAAGCAGGTCAGGAAGCAGGAGCTTATTC +
Preference number: 3 (lower is better)
Translates to: FHIALHHQGSQD*NSSRSGSRSLF
Trigger: GAATAAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAAGAGCAATATGGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CCA 72 bp AATTTACTTAAGGTTAGACATAGCTATGAAGGTGTGTaGGAAGTCCTCAAGGGAGGCTCACAGCTGCCACCA +
Preference number: 3 (lower is better)
Translates to: NLLKVRHSYEGV*EVLKGGSQLPP
Trigger: TGGTGGCAGCTGTGAGCCTCCCTTGAGGACTTCCCACACACCTTCATAGCTATGTCTAACCTTAAGTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CCA 72 bp TTCCTTGGTGATACTACTGGAGTTGACAGACAATGCTaGGTCTTCATTGACCCCCTCAGGCGTTTGATTTAC +
Preference number: 3 (lower is better)
Translates to: FLGDTTGVDRQC*VFIDPLRRLIY
Trigger: GTAAATCAAACGCCTGAGGGGGTCAATGAAGACCCAGCATTGTCTGTCAACTCCAGTAGTATCACCAAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR-3UTR CAA 90 bp CACCTGCACCAGACTCTTTCCTTGTACCCCTCCCATACCCATTTCTTGAGAATAGTCAACGTGGCTAACTaGCTTACTTGGAAACTTGAA +
Preference number: 3 (lower is better)
Translates to: HLHQTLSLYPSHTHFLRIVNVAN*LTWKLE
Trigger: TTCAAGTTTCCAAGTAAGCAAGTTAGCCACGTTGAC...TATTCTCAAGAAATGGGTATGGGAGGGGTACAAGGAAAGAGTCTGGTGCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR TCA 72 bp TTCCACAGGAATAGGTGTGGCACAGTTAGATCTCATTaGGGGAATTCCTCAAGAGAGGCTCCATTATCTGTG +
Preference number: 3 (lower is better)
Translates to: FHRNRCGTVRSH*GNSSREAPLSV
Trigger: CACAGATAATGGAGCCTCTCTTGAGGAATTCCCTCAATGAGATCTAACTGTGCCACACCTATTCCTGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR TCA 72 bp TATGGGATGCCAAGACTCCAGGAGACTAAGTTTCCGTaGAACTTTTTGCCTCAGAATGGCGTCCAAGCTTTT +
Preference number: 3 (lower is better)
Translates to: YGMPRLQETKFP*NFLPQNGVQAF
Trigger: AAAAGCTTGGACGCCATTCTGAGGCAAAAAGTTTCACGGAAACTTAGTCTCCTGGAGTCTTGGCATCCCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR TCA 72 bp GATACTGAAGGAAAGCACACAAATCCGTTCACCGACTaGTGCAAGGACAAAGTTTGGAGCATTCGTGCTATG +
Preference number: 3 (lower is better)
Translates to: DTEGKHTNPFTD*CKDKVWSIRAM
Trigger: CATAGCACGAATGCTCCAAACTTTGTCCTTGCATCAGTCGGTGAACGGATTTGTGTGCTTTCCTTCAGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR GCA 72 bp TGGCCATGGGCTATGTCTTGTGCTGCTGAAGTGACTTaGAATCTCATTGTACACTTGATGGACATGCTTTTG +
Preference number: 3 (lower is better)
Translates to: WPWAMSCAAEVT*NLIVHLMDMLL
Trigger: CAAAAGCATGTCCATCAAGTGTACAATGAGATTGCAAGTCACTTCAGCAGCACAAGACATAGCCCATGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR CCA 72 bp AATGTTCCACAACCTCCCCAAATAGCACCACCAACCTaGGACCAAGTAGTTAAATACACAAACTGTGGGTCA +
Preference number: 3 (lower is better)
Translates to: NVPQPPQIAPPT*DQVVKYTNCGS
Trigger: TGACCCACAGTTTGTGTATTTAACTACTTGGTCCCAGGTTGGTGGTGCTATTTGGGGAGGTTGTGGAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR-3UTR CAA 90 bp TGCAACCCCTGTCCTGAACTGAGACAAACTGTGAGTAAGAAACAGCCAACTGTGCCCAACCTCTTTTACTaGTTTACAACTTCACTCCTA +
Preference number: 3 (lower is better)
Translates to: CNPCPELRQTVSKKQPTVPNLFY*FTTSLL
Trigger: TAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGG...CACAGTTGGCTGTTTCTTACTCACAGTTTGTCTCAGTTCAGGACAGGGGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
3UTR TCA 72 bp TTGCAGGGTCAATGGACATATTTCTTCCTATACTTTTaGCTGACACCCCAGGATGCCCTTTCAAAGGAGAAG +
Preference number: 3 (lower is better)
Translates to: LQGQWTYFFLYF*LTPQDALSKEK
Trigger: CTTCTCCTTTGAAAGGGCATCCTGGGGTGTCAGTCAAAAGTATAGGAAGAAATATGTCCATTGACCCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR GCA 72 bp TATAACCTTCTTTCAACAACTTCTCCAAAATGCTACTaGAAACCTCAGGAAGACCCCCAGGTAAGGGCTTGT +
Preference number: 3 (lower is better)
Translates to: YNLLSTTSPKCY*KPQEDPQVRAC
Trigger: ACAAGCCCTTACCTGGGGGTCTTCCTGAGGTTTGCAGTAGCATTTTGGAGAAGTTGTTGAAAGAAGGTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212817.2
3UTR GCA 72 bp ATAACGATGAAACACAGGACTTGGGTCAGGACATCCTaGTACACCAGATGGTTCAATAGCTTTGTCTTTACC +
Preference number: 3 (lower is better)
Translates to: ITMKHRTWVRTS*YTRWFNSFVFT
Trigger: GGTAAAGACAAAGCTATTGAACCATCTGGTGTAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCATCGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR CCA 72 bp ATATATATAGGTTCTGGGGACTCAGGGTGTCAGGATTaGTGGCACATTCCTGTACCAATTAAGCCATTTCAC +
Preference number: 3 (lower is better)
Translates to: IYIGSGDSGCQD*WHIPVPIKPFH
Trigger: GTGAAATGGCTTAATTGGTACAGGAATGTGCCACCAATCCTGACACCCTGAGTCCCCAGAACCTATATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR-3UTR CAA 90 bp CCAAGATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTGCCCTGGCTTGCTTAGCTaGCTTTCATATAAAACCCAA +
Preference number: 3 (lower is better)
Translates to: PRCKLGRKGFIQLTLPYCPGLLS*LSYKTQ
Trigger: TTGGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGG...GCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCATCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR GCA 72 bp GACCCCCAGGTAAGGGCTTGTCTTTATCCACAGTGTTaGTCTCATAGTGAAATTCATAGCCAAAATGTTTCA +
Preference number: 3 (lower is better)
Translates to: DPQVRACLYPQC*SHSEIHSQNVS
Trigger: TGAAACATTTTGGCTATGAATTTCACTATGAGAGCAACACTGTGGATAAAGACAAGCCCTTACCTGGGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212817.2
3UTR GCA 72 bp TCTCCAATGTCACTGGTGATTATTCCCCCTTTAAATTaGTCAGACGCTTGGACGGTATCAAATTTTCGAGGT +
Preference number: 3 (lower is better)
Translates to: SPMSLVIIPPLN*SDAWTVSNFRG
Trigger: ACCTCGAAAATTTGATACCGTCCAAGCGTCTGAGCAATTTAAAGGGGGAATAATCACCAGTGACATTGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR CCA 72 bp GGTGAAAGTAGGAGAATCAGGTTTCAAGATGATCCTTaGTTACATAGCAAGATTGAGGTCAACCTGGACCAT +
Preference number: 3 (lower is better)
Translates to: GESRRIRFQDDP*LHSKIEVNLDH
Trigger: ATGGTCCAGGTTGACCTCAATCTTGCTATGTAACCAAGGATCATCTTGAAACCTGATTCTCCTACTTTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR-3UTR CAA 90 bp GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATAAAACCCGTATATGGGAGTGACTaGGCTGTTATTCTAAGTTTA +
Preference number: 3 (lower is better)
Translates to: DVTGLLPLACLACFHIKPVYGSD*AVILSL
Trigger: TAAACTTAGAATAACAGCCAAGTCACTCCCATATAC...GGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR TCA 72 bp GACACCCTCTGGATGCTTGAAATCCATAACAATCGCTaGCCCCAAACTGAGAGAAATAATCTCATCTTCAAA +
Preference number: 3 (lower is better)
Translates to: DTLWMLEIHNNR*PQTERNNLIFK
Trigger: TTTGAAGATGAGATTATTTCTCTCAGTTTGGGGTCAGCGATTGTTATGGATTTCAAGCATCCAGAGGGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212358.2
ENSMUST00000212817.2
3UTR TCA 72 bp AGGGTCAATGGACATATTTCTTCCTATACTTTTGACTaGCACCCCAGGATGCCCTTTCAAAGGAGAAGAAAT +
Preference number: 3 (lower is better)
Translates to: RVNGHISSYTFD*HPRMPFQRRRN
Trigger: ATTTCTTCTCCTTTGAAAGGGCATCCTGGGGTGTCAGTCAAAAGTATAGGAAGAAATATGTCCATTGACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR TCA 72 bp CCTCAGGAAGACCTTATTTTTCATGTACTTGTGTCTTaGCTGACCCATCACATGAGCTTAGATATGGAGACT +
Preference number: 3 (lower is better)
Translates to: PQEDLIFHVLVS*LTHHMSLDMET
Trigger: AGTCTCCATATCTAAGCTCATGTGATGGGTCAGTCAAGACACAAGTACATGAAAAATAAGGTCTTCCTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR CCA 72 bp TGGTGGCACATTCCTGTACCAATTAAGCCATTTCACTaGTCTACATGTTCCTTTAATACAGTGGTTCTCAAC +
Preference number: 3 (lower is better)
Translates to: WWHIPVPIKPFH*STCSFNTVVLN
Trigger: GTTGAGAACCACTGTATTAAAGGAACATGTAGACCAGTGAAATGGCTTAATTGGTACAGGAATGTGCCACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR TCA 72 bp GGCTACGATCACACCCAATCATATATAAGTCCTTGTTaGTGCCAAGGTATTTTCCATTTCCACATCCGATAT +
Preference number: 3 (lower is better)
Translates to: GYDHTQSYISPC*CQGIFHFHIRY
Trigger: ATATCGGATGTGGAAATGGAAAATACCTTGGCATCAACAAGGACTTATATATGATTGGGTGTGATCGTAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR CCA 72 bp GTTCCTCTCGGAGTCTTTCATTATGATCAGTCAACGTaGCTAACTTGCTTACTTGGAAACTTGAATTCACAA +
Preference number: 3 (lower is better)
Translates to: VPLGVFHYDQST*LTCLLGNLNSQ
Trigger: TTGTGAATTCAAGTTTCCAAGTAAGCAAGTTAGCCACGTTGACTGATCATAATGAAAGACTCCGAGAGGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR-3UTR CAA 90 bp GCATTTATGATCACCACACACACCATGTTTACTTATTTGTTCGCTTGTACCAGCTCAGATACTTCCTTATaGTCCAGGAATATTCACTTC +
Preference number: 3 (lower is better)
Translates to: AFMITTHTMFTYLFACTSSDTSL*SRNIHF
Trigger: GAAGTGAATATTCCTGGACAATAAGGAAGTATCTGA...GCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATCATAAATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
3UTR TCA 72 bp AATCTTTCCTTGGAGGTTCTTATAATAAAACGATACTaGAGGAAAGCACACAAATCCGTTCACCGACTGATG +
Preference number: 3 (lower is better)
Translates to: NLSLEVLIIKRY*RKAHKSVHRLM
Trigger: CATCAGTCGGTGAACGGATTTGTGTGCTTTCCTTCAGTATCGTTTTATTATAAGAACCTCCAAGGAAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR TCA 72 bp GGGATTTCTAGCTCTTATCTAGTAAATTGTAATGCCTaGTTTCTTTCACTATCTACACTGGTGGCATTTCGT +
Preference number: 3 (lower is better)
Translates to: GISSSYLVNCNA*FLSLSTLVAFR
Trigger: ACGAAATGCCACCAGTGTAGATAGTGAAAGAAATCAGGCATTACAATTTACTAGATAAGAGCTAGAAATCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR-3UTR CAA 90 bp ATGACAAACATAGGTTCTTCAATTCATCTACACCCCAACCTCTTTTACTTGTTTTCAGATACTTCCTTATaGTCCAGGAATATTCACTTC +
Preference number: 3 (lower is better)
Translates to: MTNIGSSIHLHPNLFYLFSDTSL*SRNIHF
Trigger: GAAGTGAATATTCCTGGACAATAAGGAAGTATCTGA...AAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGAAGAACCTATGTTTGTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
3UTR TCA 72 bp AAGTTAGGTGATACATTAAGATCAACCAAGGTATACTaGGGTAGCCCGATGCAAAATAACTCTTTACACAAA +
Preference number: 3 (lower is better)
Translates to: KLGDTLRSTKVY*GSPMQNNSLHK
Trigger: TTTGTGTAAAGAGTTATTTTGCATCGGGCTACCTCAGTATACCTTGGTTGATCTTAATGTATCACCTAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR TCA 72 bp TATATGAATAGGGAGTTCAGAATTAGGAACTTTCCTTaGCTTATACTCTTCTTCCTTGGTGATACTACTGGA +
Preference number: 3 (lower is better)
Translates to: YMNREFRIRNFP*LILFFLGDTTG
Trigger: TCCAGTAGTATCACCAAGGAAGAAGAGTATAAGTCAAGGAAAGTTCCTAATTCTGAACTCCCTATTCATATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR CCA 72 bp AAAGACTTTAGGAGAAACTTAGCAAGGTTTTCACACTaGCAGTTCCTATTTAGTCTCAAGAAAACTCTAGTT +
Preference number: 3 (lower is better)
Translates to: KDFRRNLARFSH*QFLFSLKKTLV
Trigger: AACTAGAGTTTTCTTGAGACTAAATAGGAACTGCCAGTGTGAAAACCTTGCTAAGTTTCTCCTAAAGTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR GCA 72 bp TATAACCTTCTTTCAACAACTTCTCCAAAATGCTACTaGAAACCTCAGGAAGACCTTATTTTTCATGTACTT +
Preference number: 3 (lower is better)
Translates to: YNLLSTTSPKCY*KPQEDLIFHVL
Trigger: AAGTACATGAAAAATAAGGTCTTCCTGAGGTTTGCAGTAGCATTTTGGAGAAGTTGTTGAAAGAAGGTTATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR CAA 72 bp GGCCTGCCCACCAGGTCTCAGGAGACGGGCAAGTTCTaGGAGAGCTTCCACTCTGCGCTCTGCAGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: GLPTRSQETGKF*ESFHSALCSCK
Trigger: TTTGCAACTGCAGAGCGCAGAGTGGAAGCTCTCCAAGAACTTGCCCGTCTCCTGAGACCTGGTGGGCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
CDS-3UTR TCA 90 bp ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGCACAAGACCCACTTCTaGCAGGAACAGCCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: TRLALNSEIRLPLPPECWHKTHF*QEQPAH
Trigger: ATGCGCTGGCTGTTCCTGTCAGAAGTGGGTCTTGTG...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR TCA 90 bp ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGATGCTGGGTCTTCATTaGCCCCCTCAGGCGTTTGAT +
Preference number: 4 (lower is better)
Translates to: TRLALNSEIRLPLPPECWMLGLH*PPQAFD
Trigger: ATCAAACGCCTGAGGGGGTCAATGAAGACCCAGCAT...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGGAGAGCTTCCACTCTaGGCTCTGCAGTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TRLALNSEIRLPLPPECWGELPL*ALQLQS
Trigger: ACTTTGCAACTGCAGAGCGCAGAGTGGAAGCTCTCC...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGGAGTTGACAGACAATaGTGGGTCTTCATTGACCCC +
Preference number: 4 (lower is better)
Translates to: TRLALNSEIRLPLPPECWGVDRQ*WVFIDP
Trigger: GGGGTCAATGAAGACCCAGCATTGTCTGTCAACTCC...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATCGCAGACTAAGGCCTaGAACTGCCTCTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: QAGLELRNSPASASRVLGSQTKA*NCLSLQ
Trigger: TTGTAGAGAGAGGCAGTTCCAGGCCTTAGTCTGCGA...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGATGAAACACAGGACTTaGGTCAGGACATCCTGCTAC +
Preference number: 4 (lower is better)
Translates to: TRLALNSEIRLPLPPECWMKHRT*VRTSCY
Trigger: GTAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCAT...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGACATCACCCACAGCCTaGCATGAAGCTTCCAATTCT +
Preference number: 4 (lower is better)
Translates to: TRLALNSEIRLPLPPECWTSPTA*HEASNS
Trigger: AGAATTGGAAGCTTCATGCCAGGCTGTGGGTGATGT...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR TCA 90 bp CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGACTTGTGCTGCTGAAGTaGCTTGCAATCTCATTGTAC +
Preference number: 4 (lower is better)
Translates to: QAGLELRNSPASASRVLGLVLLK*LAISLY
Trigger: GTACAATGAGATTGCAAGTCACTTCAGCAGCACAAG...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR TCA 90 bp CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGAACCCCCTCAGGCGTTTaGTTTACTAGAAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: QAGLELRNSPASASRVLGTPSGV*FTRNSS
Trigger: GGAAGAATTTCTAGTAAATCAAACGCCTGAGGGGGT...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGATTCCCCCTTTAAATTaGTCAGACGCTTGGACGGTA +
Preference number: 4 (lower is better)
Translates to: TRLALNSEIRLPLPPECWIPPLN*SDAWTV
Trigger: TACCGTCCAAGCGTCTGAGCAATTTAAAGGGGGAAT...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATGCGCATTCCCCTCTTaGTTAAAGTCAAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: QAGLELRNSPASASRVLGCAFPS*LKSSLQ
Trigger: TTGGAGACTTGACTTTAAGCAAGAGGGGAATGCGCA...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR TCA 90 bp ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGCGAGGTGTAATTCCATaGGTCCAAAGGTATCTAGAT +
Preference number: 4 (lower is better)
Translates to: TRLALNSEIRLPLPPECWRGVIP*VQRYLD
Trigger: ATCTAGATACCTTTGGACTCATGGAATTACACCTCG...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR TCA 90 bp ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGTATGTCTTGTGCTGCTaGAGTGACTTGCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: TRLALNSEIRLPLPPECWYVLCC*SDLQSH
Trigger: ATGAGATTGCAAGTCACTTCAGCAGCACAAGACATA...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGAAAGACACTGCTTGGATaGCTTCATGTTTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: QAGLELRNSPASASRVLGKTLLG*LHVSAT
Trigger: TGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTT...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATCTTCAAATGCAGAATaGGTGTCAATATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: QAGLELRNSPASASRVLGSSNAE*VSIWAG
Trigger: TCCTGCCCATATTGACACGCATTCTGCATTTGAAGA...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGAGCTGCTGAAGTGACTTaGAATCTCATTGTACACTTG +
Preference number: 4 (lower is better)
Translates to: QAGLELRNSPASASRVLGAAEVT*NLIVHL
Trigger: CAAGTGTACAATGAGATTGCAAGTCACTTCAGCAGC...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATCAGCAACACATGCCTaGCTTTACTCTGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: QAGLELRNSPASASRVLGSATHA*LYSVSL
Trigger: TAAGGAAACAGAGTAAAGCCAGGCATGTGTTGCTGA...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATACTGTGACACCCTCTaGATGCTTGAAATCCATAAC +
Preference number: 4 (lower is better)
Translates to: QAGLELRNSPASASRVLGYCDTL*MLEIHN
Trigger: GTTATGGATTTCAAGCATCCAGAGGGTGTCACAGTA...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR TCA 90 bp CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGAAGCACATCTTGGGAATaGAAGCAGGTCCTATTTATA +
Preference number: 4 (lower is better)
Translates to: QAGLELRNSPASASRVLGSTSWE*KQVLFI
Trigger: TATAAATAGGACCTGCTTTCATTCCCAAGATGTGCT...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGAAATTGCTCAGACGCTTaGACGGTATCAAATTTTCGA +
Preference number: 4 (lower is better)
Translates to: QAGLELRNSPASASRVLGNCSDA*TVSNFR
Trigger: TCGAAAATTTGATACCGTCCAAGCGTCTGAGCAATT...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR TCA 90 bp CACCTGCACCAGACTCTTTCCTTGTACCCCTCCCATACCCATTTCTTGAGAATACACAAGACCCACTTCTaGCAGGAACAGCCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: HLHQTLSLYPSHTHFLRIHKTHF*QEQPAH
Trigger: ATGCGCTGGCTGTTCCTGTCAGAAGTGGGTCTTGTG...TATTCTCAAGAAATGGGTATGGGAGGGGTACAAGGAAAGAGTCTGGTGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
CDS-3UTR GCA 90 bp CCCTTCTTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTTGGGAGAGCTTCCACTCTaGGCTCTGCAGTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: PFLKVSSLGTSFLFPAGLGELPL*ALQLQS
Trigger: ACTTTGCAACTGCAGAGCGCAGAGTGGAAGCTCTCC...CAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR GCA 90 bp CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGACTTTATCCACAGTGTTaGTCTCATAGTGAAATTCAT +
Preference number: 4 (lower is better)
Translates to: QAGLELRNSPASASRVLGLYPQC*SHSEIH
Trigger: ATGAATTTCACTATGAGAGCAACACTGTGGATAAAG...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATATTACAAATGCATATaGCTTATTAGGTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: QAGLELRNSPASASRVLGYYKCI*LIRWHE
Trigger: CTCATGCCACCTAATAAGCCATATGCATTTGTAATA...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATCATCTTTATCTCCTTaGCTAATTCTCTTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: QAGLELRNSPASASRVLGSSLSP*LILFPL
Trigger: TAGAGGAAAGAGAATTAGCCAAGGAGATAAAGATGA...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGTCATCTTTATCTCCTTaGCTAATTCTCTTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: TRLALNSEIRLPLPPECWSSLSP*LILFPL
Trigger: TAGAGGAAAGAGAATTAGCCAAGGAGATAAAGATGA...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
3UTR CAA 72 bp GGATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTaGCTTTCATATAAAACCCAAGACTGCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GCYWLASPGLLS*LSYKTQDCQSR
Trigger: CCTGGACTGGCAGTCTTGGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
CDS-3UTR TCA 90 bp GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATAAAACCCATGCTGGGTCTTCATTaGCCCCCTCAGGCGTTTGAT +
Preference number: 4 (lower is better)
Translates to: DVTGLLPLACLACFHIKPMLGLH*PPQAFD
Trigger: ATCAAACGCCTGAGGGGGTCAATGAAGACCCAGCAT...GGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
CDS-3UTR GCA 90 bp ATGCAAGCATCACAAGACCCACTTCTGACAGGAACAGCCAGCGCATCGCAGACTAGTGGGATAAGACACTaGTTGGATGCCTTCATGTTT +
Preference number: 4 (lower is better)
Translates to: MQASQDPLLTGTASASQTSGIRH*LDAFMF
Trigger: AAACATGAAGGCATCCAAGCAGTGTCTTATCCCACT...AGTCTGCGATGCGCTGGCTGTTCCTGTCAGAAGTGGGTCTTGTGATGCTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
CDS-3UTR GCA 90 bp CCCTTCTTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTTGTCTCCAAAATGCTACTaGAAACCTCAGGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: PFLKVSSLGTSFLFPAGLSPKCY*KPQEDP
Trigger: GGGGTCTTCCTGAGGTTTGCAGTAGCATTTTGGAGA...CAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
3UTR CAA 72 bp GCAATGGAGGGATGTTACTGGCTTGCTTCCCCTGGCTaGCTTAGCTTGCTTTCATATAAAACCCAAGACTGC +
Preference number: 4 (lower is better)
Translates to: AMEGCYWLASPG*LSLLSYKTQDC
Trigger: GCAGTCTTGGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
CDS-3UTR TCA 90 bp CCCTTCTTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTTGCTTGTGCTGCTGAAGTaGCTTGCAATCTCATTGTAC +
Preference number: 4 (lower is better)
Translates to: PFLKVSSLGTSFLFPAGLLVLLK*LAISLY
Trigger: GTACAATGAGATTGCAAGTCACTTCAGCAGCACAAG...CAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR TCA 90 bp CCAAGATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTGCTACCAGGGTTTCTTTTaGGGTGCCAGGGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: PRCKLGRKGFIQLTLPYCYQGFF*GAREPA
Trigger: TGCTGGTTCCCTGGCACCTCAAAAGAAACCCTGGTA...GCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCATCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
CDS-3UTR CCA 90 bp CCCTTCTTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTTGCACTATGGAACCACTTaGCAAAGCTTTCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: PFLKVSSLGTSFLFPAGLHYGTT*QSFQEL
Trigger: GAGTTCCTGAAAGCTTTGCCAAGTGGTTCCATAGTG...CAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CCA 90 bp CACCTGCACCAGACTCTTTCCTTGTACCCCTCCCATACCCATTTCTTGAGAATAATGAAACACAGGACTTaGGTCAGGACATCCTGCTAC +
Preference number: 4 (lower is better)
Translates to: HLHQTLSLYPSHTHFLRIMKHRT*VRTSCY
Trigger: GTAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCAT...TATTCTCAAGAAATGGGTATGGGAGGGGTACAAGGAAAGAGTCTGGTGCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
CDS-3UTR TCA 90 bp CCCTTCTTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTTGTATGTCTTGTGCTGCTaGAGTGACTTGCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: PFLKVSSLGTSFLFPAGLYVLCC*SDLQSH
Trigger: ATGAGATTGCAAGTCACTTCAGCAGCACAAGACATA...CAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR GCA 90 bp TGCAACCCCTGTCCTGAACTGAGACAAACTGTGAGTAAGAAACAGCCAACTGTGTGCGCATTCCCCTCTTaGTTAAAGTCAAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: CNPCPELRQTVSKKQPTVCAFPS*LKSSLQ
Trigger: TTGGAGACTTGACTTTAAGCAAGAGGGGAATGCGCA...CACAGTTGGCTGTTTCTTACTCACAGTTTGTCTCAGTTCAGGACAGGGGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR GCA 90 bp CACCTGCACCAGACTCTTTCCTTGTACCCCTCCCATACCCATTTCTTGAGAATATGCGCATTCCCCTCTTaGTTAAAGTCAAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: HLHQTLSLYPSHTHFLRICAFPS*LKSSLQ
Trigger: TTGGAGACTTGACTTTAAGCAAGAGGGGAATGCGCA...TATTCTCAAGAAATGGGTATGGGAGGGGTACAAGGAAAGAGTCTGGTGCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
CDS-3UTR CCA 90 bp CCCTTCTTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTTGTCAGCAACACATGCCTaGCTTTACTCTGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: PFLKVSSLGTSFLFPAGLSATHA*LYSVSL
Trigger: TAAGGAAACAGAGTAAAGCCAGGCATGTGTTGCTGA...CAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CCA 90 bp CCCTTCTTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTTGTACTGTGACACCCTCTaGATGCTTGAAATCCATAAC +
Preference number: 4 (lower is better)
Translates to: PFLKVSSLGTSFLFPAGLYCDTL*MLEIHN
Trigger: GTTATGGATTTCAAGCATCCAGAGGGTGTCACAGTA...CAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CCA 90 bp TTCTGGCTAAAGTGTTTCTGGGCAGGCATCCAGAATGTAATAGCAAGATGCAGTTACTATGCGTGGCCATaGGCTATGTCTTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FWLKCFWAGIQNVIARCSYYAWP*AMSCAA
Trigger: AGCAGCACAAGACATAGCCCATGGCCACGCATAGTA...ACTGCATCTTGCTATTACATTCTGGATGCCTGCCCAGAAACACTTTAGCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CCA 90 bp TGCAACCCCTGTCCTGAACTGAGACAAACTGTGAGTAAGAAACAGCCAACTGTGCACTATGGAACCACTTaGCAAAGCTTTCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: CNPCPELRQTVSKKQPTVHYGTT*QSFQEL
Trigger: GAGTTCCTGAAAGCTTTGCCAAGTGGTTCCATAGTG...CACAGTTGGCTGTTTCTTACTCACAGTTTGTCTCAGTTCAGGACAGGGGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
3UTR CAA 72 bp GATCACCACACACACCATGTTTACTTATTTGTTCGCTaGTACCAGCCATCCCTTCTTGAAGGTCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: DHHTHHVYLFVR*YQPSLLEGQLP
Trigger: AGGGAGCTGACCTTCAAGAAGGGATGGCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
3UTR CAA 72 bp GAGCTTATTCAGAGGCAATGGAGGGATGTTACTGGCTaGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATA +
Preference number: 4 (lower is better)
Translates to: ELIQRQWRDVTG*LPLACLACFHI
Trigger: TATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATCCCTCCATTGCCTCTGAATAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CAA 72 bp TCAGGACATCCTGCTACACCAGATGGTTCAATAGCTTaGTCTTTACCAGGGTTTCTTTTGAGGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SGHPATPDGSIA*SLPGFLLRCQG
Trigger: TCCCTGGCACCTCAAAAGAAACCCTGGTAAAGACAAAGCTATTGAACCATCTGGTGTAGCAGGATGTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
CDS-3UTR TCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAACACAAGACCCACTTCTaGCAGGAACAGCCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQREHKTHF*QEQPAH
Trigger: ATGCGCTGGCTGTTCCTGTCAGAAGTGGGTCTTGTG...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR TCA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGTACCAGGGTTTCTTTTaGGGTGCCAGGGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRYQGFF*GAREPA
Trigger: TGCTGGTTCCCTGGCACCTCAAAAGAAACCCTGGTA...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR TCA 90 bp GCATTTATGATCACCACACACACCATGTTTACTTATTTGTTCGCTTGTACCAGCACCCACAGCCTGGCATaGAGCTTCCAATTCTCCATC +
Preference number: 4 (lower is better)
Translates to: AFMITTHTMFTYLFACTSTHSLA*SFQFSI
Trigger: GATGGAGAATTGGAAGCTTCATGCCAGGCTGTGGGT...GCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATCATAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR TCA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGACCCACAGCCTGGCATaGAGCTTCCAATTCTCCATC +
Preference number: 4 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRTHSLA*SFQFSI
Trigger: GATGGAGAATTGGAAGCTTCATGCCAGGCTGTGGGT...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp TGCAACCCCTGTCCTGAACTGAGACAAACTGTGAGTAAGAAACAGCCAACTGTGAGTGGGATAAGACACTaGTTGGATGCCTTCATGTTT +
Preference number: 4 (lower is better)
Translates to: CNPCPELRQTVSKKQPTVSGIRH*LDAFMF
Trigger: AAACATGAAGGCATCCAAGCAGTGTCTTATCCCACT...CACAGTTGGCTGTTTCTTACTCACAGTTTGTCTCAGTTCAGGACAGGGGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR GCA 90 bp GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATAAAACCCATTCCCCCTTTAAATTaGTCAGACGCTTGGACGGTA +
Preference number: 4 (lower is better)
Translates to: DVTGLLPLACLACFHIKPIPPLN*SDAWTV
Trigger: TACCGTCCAAGCGTCTGAGCAATTTAAAGGGGGAAT...GGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
CDS-3UTR GCA 90 bp CCAAGATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTGCTCCACATCCGATATCTaGCACTATGGAACCACTTGG +
Preference number: 4 (lower is better)
Translates to: PRCKLGRKGFIQLTLPYCSTSDI*HYGTTW
Trigger: CCAAGTGGTTCCATAGTGGCAGATATCGGATGTGGA...GCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCATCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
CDS-3UTR GCA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGGAGAGCTTCCACTCTaGGCTCTGCAGTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRGELPL*ALQLQS
Trigger: ACTTTGCAACTGCAGAGCGCAGAGTGGAAGCTCTCC...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
3UTR CAA 72 bp GGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATaGCTCTTCATCACCAAGGAAGTCAGGACTGGAACT +
Preference number: 4 (lower is better)
Translates to: GEERVYSAYTSI*LFITKEVRTGT
Trigger: AGTTCCAGTCCTGACTTCCTTGGTGATGAAGAGCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
3UTR CAA 72 bp GACTTATACTCTTCTTCCTTGGTGATACTACTGGAGTaGACAGACAATGCTGGGTCTTCATTGACCCCCTCA +
Preference number: 4 (lower is better)
Translates to: DLYSSSLVILLE*TDNAGSSLTPS
Trigger: TGAGGGGGTCAATGAAGACCCAGCATTGTCTGTCAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
CDS-3UTR TCA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTCACAAGACCCACTTCTaGCAGGAACAGCCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVHKTHF*QEQPAH
Trigger: ATGCGCTGGCTGTTCCTGTCAGAAGTGGGTCTTGTG...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR TCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAATGCTGGGTCTTCATTaGCCCCCTCAGGCGTTTGAT +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQREMLGLH*PPQAFD
Trigger: ATCAAACGCCTGAGGGGGTCAATGAAGACCCAGCAT...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR TCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAATACCAGGGTTTCTTTTaGGGTGCCAGGGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQREYQGFF*GAREPA
Trigger: TGCTGGTTCCCTGGCACCTCAAAAGAAACCCTGGTA...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp GCATTTATGATCACCACACACACCATGTTTACTTATTTGTTCGCTTGTACCAGCGGAGTTGACAGACAATaGTGGGTCTTCATTGACCCC +
Preference number: 4 (lower is better)
Translates to: AFMITTHTMFTYLFACTSGVDRQ*WVFIDP
Trigger: GGGGTCAATGAAGACCCAGCATTGTCTGTCAACTCC...GCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATCATAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CCA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGTACTATGCGTGGCCATaGGCTATGTCTTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRYYAWP*AMSCAA
Trigger: AGCAGCACAAGACATAGCCCATGGCCACGCATAGTA...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGTCGCAGACTAAGGCCTaGAACTGCCTCTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRSQTKA*NCLSLQ
Trigger: TTGTAGAGAGAGGCAGTTCCAGGCCTTAGTCTGCGA...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp GCATTTATGATCACCACACACACCATGTTTACTTATTTGTTCGCTTGTACCAGCTCGCAGACTAAGGCCTaGAACTGCCTCTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: AFMITTHTMFTYLFACTSSQTKA*NCLSLQ
Trigger: TTGTAGAGAGAGGCAGTTCCAGGCCTTAGTCTGCGA...GCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATCATAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
3UTR CAA 72 bp GGTCGTTTGACCCCCAAAGGGGTCATGACCTACAGGTaGAGAACTGCTGCTTTAATATATAACCAACATCTT +
Preference number: 4 (lower is better)
Translates to: GRLTPKGVMTYR*RTAALIYNQHL
Trigger: AAGATGTTGGTTATATATTAAAGCAGCAGTTCTCAACCTGTAGGTCATGACCCCTTTGGGGGTCAAACGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
CDS-3UTR TCA 90 bp CCAAGATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTGCCGAGGTGTAATTCCATaGGTCCAAAGGTATCTAGAT +
Preference number: 4 (lower is better)
Translates to: PRCKLGRKGFIQLTLPYCRGVIP*VQRYLD
Trigger: ATCTAGATACCTTTGGACTCATGGAATTACACCTCG...GCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCATCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
CDS-3UTR TCA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTATGCTGGGTCTTCATTaGCCCCCTCAGGCGTTTGAT +
Preference number: 4 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVMLGLH*PPQAFD
Trigger: ATCAAACGCCTGAGGGGGTCAATGAAGACCCAGCAT...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR TCA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTACCCACAGCCTGGCATaGAGCTTCCAATTCTCCATC +
Preference number: 4 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVTHSLA*SFQFSI
Trigger: GATGGAGAATTGGAAGCTTCATGCCAGGCTGTGGGT...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp CTGATTGCCTGTATCTTCTGTCCAATTCACACTCTCCAGAAGCTTTTTCTCCTCAGTGGGATAAGACACTaGTTGGATGCCTTCATGTTT +
Preference number: 4 (lower is better)
Translates to: LIACIFCPIHTLQKLFLLSGIRH*LDAFMF
Trigger: AAACATGAAGGCATCCAAGCAGTGTCTTATCCCACT...GAGGAGAAAAAGCTTCTGGAGAGTGTGAATTGGACAGAAGATACAGGCAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212817.2
CDS-3UTR GCA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGTCTCCAAAATGCTACTaGAAACCTCAGGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRSPKCY*KPQEDP
Trigger: GGGGTCTTCCTGAGGTTTGCAGTAGCATTTTGGAGA...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
CDS-3UTR GCA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGTCCACATCCGATATCTaGCACTATGGAACCACTTGG +
Preference number: 4 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRSTSDI*HYGTTW
Trigger: CCAAGTGGTTCCATAGTGGCAGATATCGGATGTGGA...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTGGAGAGCTTCCACTCTaGGCTCTGCAGTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVGELPL*ALQLQS
Trigger: ACTTTGCAACTGCAGAGCGCAGAGTGGAAGCTCTCC...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAGGAGTTGACAGACAATaGTGGGTCTTCATTGACCCC +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQREGVDRQ*WVFIDP
Trigger: GGGGTCAATGAAGACCCAGCATTGTCTGTCAACTCC...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAATACTATGCGTGGCCATaGGCTATGTCTTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQREYYAWP*AMSCAA
Trigger: AGCAGCACAAGACATAGCCCATGGCCACGCATAGTA...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATAAAACCCTCCTGCTACACCAGATaGTTCAATAGCTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: DVTGLLPLACLACFHIKPSCYTR*FNSFVF
Trigger: AAAGACAAAGCTATTGAACCATCTGGTGTAGCAGGA...GGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
CDS-3UTR CCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAGAATGCGTGTCAATATaGGCAGGAATTCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQREECVSI*AGIPPG
Trigger: ACCTGGGGGAATTCCTGCCCATATTGACACGCATTC...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212294.2
3UTR CAA 72 bp TTTACTTATTTGTTCGCTTGTACCAGCCATCCCTTCTaGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: FTYLFACTSHPF*KVSSLGTSFLF
Trigger: AAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGGATGGCTGGTACAAGCGAACAAATAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR TCA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGACCCCCTCAGGCGTTTaGTTTACTAGAAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRTPSGV*FTRNSS
Trigger: GGAAGAATTTCTAGTAAATCAAACGCCTGAGGGGGT...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR TCA 90 bp TTCTGGCTAAAGTGTTTCTGGGCAGGCATCCAGAATGTAATAGCAAGATGCAGTAGCACATCTTGGGAATaGAAGCAGGTCCTATTTATA +
Preference number: 4 (lower is better)
Translates to: FWLKCFWAGIQNVIARCSSTSWE*KQVLFI
Trigger: TATAAATAGGACCTGCTTTCATTCCCAAGATGTGCT...ACTGCATCTTGCTATTACATTCTGGATGCCTGCCCAGAAACACTTTAGCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR GCA 90 bp TTCTGGCTAAAGTGTTTCTGGGCAGGCATCCAGAATGTAATAGCAAGATGCAGTACAACTTCTCCAAAATaGTACTGCAAACCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: FWLKCFWAGIQNVIARCSTTSPK*YCKPQE
Trigger: TTCCTGAGGTTTGCAGTAGCATTTTGGAGAAGTTGT...ACTGCATCTTGCTATTACATTCTGGATGCCTGCCCAGAAACACTTTAGCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR GCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAATCCACATCCGATATCTaGCACTATGGAACCACTTGG +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQRESTSDI*HYGTTW
Trigger: CCAAGTGGTTCCATAGTGGCAGATATCGGATGTGGA...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAAGGAGTTGACAGACAATaGTGGGTCTTCATTGACCCC +
Preference number: 4 (lower is better)
Translates to: TPSSSDTSLLSRNIHFIKGVDRQ*WVFIDP
Trigger: GGGGTCAATGAAGACCCAGCATTGTCTGTCAACTCC...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAATACTATGCGTGGCCATaGGCTATGTCTTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TPSSSDTSLLSRNIHFIKYYAWP*AMSCAA
Trigger: AGCAGCACAAGACATAGCCCATGGCCACGCATAGTA...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp TTCTGGCTAAAGTGTTTCTGGGCAGGCATCCAGAATGTAATAGCAAGATGCAGTTCCTGCTACACCAGATaGTTCAATAGCTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: FWLKCFWAGIQNVIARCSSCYTR*FNSFVF
Trigger: AAAGACAAAGCTATTGAACCATCTGGTGTAGCAGGA...ACTGCATCTTGCTATTACATTCTGGATGCCTGCCCAGAAACACTTTAGCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAATGAAACACAGGACTTaGGTCAGGACATCCTGCTAC +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQREMKHRT*VRTSCY
Trigger: GTAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCAT...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
3UTR CAA 72 bp TGCGCCACCACACCCAGCTCTTCAGATACTTCCTTATaGTCCAGGAATATTCACTTCATTAAAATCTCACAT +
Preference number: 4 (lower is better)
Translates to: CATTPSSSDTSL*SRNIHFIKISH
Trigger: ATGTGAGATTTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGTGGTGGCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
3UTR CAA 72 bp AGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTaGTCTGTGTTTGTGGTAATCAGTACTAAATCTAGA +
Preference number: 4 (lower is better)
Translates to: SSLGTSFLFPAG*SVFVVISTKSR
Trigger: TCTAGATTTAGTACTGATTACCACAAACACAGACAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
3UTR CAA 72 bp ACTGGTGATTATTCCCCCTTTAAATTGCTCAGACGCTaGGACGGTATCAAATTTTCGAGGTGTAATTCCATG +
Preference number: 4 (lower is better)
Translates to: TGDYSPFKLLRR*DGIKFSRCNSM
Trigger: CATGGAATTACACCTCGAAAATTTGATACCGTCCAAGCGTCTGAGCAATTTAAAGGGGGAATAATCACCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
3UTR CAA 72 bp GAATTAGGAACTTTCCTTGACTTATACTCTTCTTCCTaGGTGATACTACTGGAGTTGACAGACAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: ELGTFLDLYSSS*VILLELTDNAG
Trigger: CCCAGCATTGTCTGTCAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAAGTCAAGGAAAGTTCCTAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
CDS-3UTR TCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAACTTGTGCTGCTGAAGTaGCTTGCAATCTCATTGTAC +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQRELVLLK*LAISLY
Trigger: GTACAATGAGATTGCAAGTCACTTCAGCAGCACAAG...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR TCA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGTATGTCTTGTGCTGCTaGAGTGACTTGCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRYVLCC*SDLQSH
Trigger: ATGAGATTGCAAGTCACTTCAGCAGCACAAGACATA...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp GCATTTATGATCACCACACACACCATGTTTACTTATTTGTTCGCTTGTACCAGCAAGACACTGCTTGGATaGCTTCATGTTTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: AFMITTHTMFTYLFACTSKTLLG*LHVSAT
Trigger: TGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTT...GCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATCATAAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR GCA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGAGTGGGATAAGACACTaGTTGGATGCCTTCATGTTT +
Preference number: 4 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRSGIRH*LDAFMF
Trigger: AAACATGAAGGCATCCAAGCAGTGTCTTATCCCACT...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
ENSMUST00000212358.2
CDS-3UTR GCA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGTCTTCAAATGCAGAATaGGTGTCAATATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRSSNAE*VSIWAG
Trigger: TCCTGCCCATATTGACACGCATTCTGCATTTGAAGA...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGTGACACCCTCTGGATaGTTGAAATCCATAACAATC +
Preference number: 4 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRVTPSG*LKSITI
Trigger: GATTGTTATGGATTTCAAGCATCCAGAGGGTGTCAC...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAATTCCCCCTTTAAATTaGTCAGACGCTTGGACGGTA +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQREIPPLN*SDAWTV
Trigger: TACCGTCCAAGCGTCTGAGCAATTTAAAGGGGGAAT...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGCTGCTGAAGTGACTTaGAATCTCATTGTACACTTG +
Preference number: 4 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRAAEVT*NLIVHL
Trigger: CAAGTGTACAATGAGATTGCAAGTCACTTCAGCAGC...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp GCATTTATGATCACCACACACACCATGTTTACTTATTTGTTCGCTTGTACCAGCTACTGTGACACCCTCTaGATGCTTGAAATCCATAAC +
Preference number: 4 (lower is better)
Translates to: AFMITTHTMFTYLFACTSYCDTL*MLEIHN
Trigger: GTTATGGATTTCAAGCATCCAGAGGGTGTCACAGTA...GCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATCATAAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CCA 90 bp TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTAATGAAACACAGGACTTaGGTCAGGACATCCTGCTAC +
Preference number: 4 (lower is better)
Translates to: SIHLHPNLFYLFTTSLLVMKHRT*VRTSCY
Trigger: GTAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCAT...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CCA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTACATCACCCACAGCCTaGCATGAAGCTTCCAATTCT +
Preference number: 4 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVTSPTA*HEASNS
Trigger: AGAATTGGAAGCTTCATGCCAGGCTGTGGGTGATGT...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTAACATCACCCACAGCCTaGCATGAAGCTTCCAATTCT +
Preference number: 4 (lower is better)
Translates to: SIHLHPNLFYLFTTSLLVTSPTA*HEASNS
Trigger: AGAATTGGAAGCTTCATGCCAGGCTGTGGGTGATGT...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR TCA 90 bp GCATTTATGATCACCACACACACCATGTTTACTTATTTGTTCGCTTGTACCAGCATCTCATTGTACACTTaGTGGACATGCTTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: AFMITTHTMFTYLFACTSISLYT*WTCFCS
Trigger: AGAGCAAAAGCATGTCCATCAAGTGTACAATGAGAT...GCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATCATAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR TCA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGATCTCATTGTACACTTaGTGGACATGCTTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRISLYT*WTCFCS
Trigger: AGAGCAAAAGCATGTCCATCAAGTGTACAATGAGAT...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR TCA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTACCCCCTCAGGCGTTTaGTTTACTAGAAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVTPSGV*FTRNSS
Trigger: GGAAGAATTTCTAGTAAATCAAACGCCTGAGGGGGT...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR TCA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGAGCACATCTTGGGAATaGAAGCAGGTCCTATTTATA +
Preference number: 4 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRSTSWE*KQVLFI
Trigger: TATAAATAGGACCTGCTTTCATTCCCAAGATGTGCT...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAAAGACACTGCTTGGATaGCTTCATGTTTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQREKTLLG*LHVSAT
Trigger: TGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTT...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
ENSMUST00000212358.2
CDS-3UTR GCA 90 bp TTCTGGCTAAAGTGTTTCTGGGCAGGCATCCAGAATGTAATAGCAAGATGCAGTCTTTATCCACAGTGTTaGTCTCATAGTGAAATTCAT +
Preference number: 4 (lower is better)
Translates to: FWLKCFWAGIQNVIARCSLYPQC*SHSEIH
Trigger: ATGAATTTCACTATGAGAGCAACACTGTGGATAAAG...ACTGCATCTTGCTATTACATTCTGGATGCCTGCCCAGAAACACTTTAGCCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR GCA 90 bp ATGACAAACATAGGTTCTTCAATTCATCTACACCCCAACCTCTTTTACTTGTTTTCTCCAAAATGCTACTaGAAACCTCAGGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: MTNIGSSIHLHPNLFYLFSPKCY*KPQEDP
Trigger: GGGGTCTTCCTGAGGTTTGCAGTAGCATTTTGGAGA...AAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGAAGAACCTATGTTTGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR GCA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTGCGCATTCCCCTCTTaGTTAAAGTCAAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVCAFPS*LKSSLQ
Trigger: TTGGAGACTTGACTTTAAGCAAGAGGGGAATGCGCA...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAATCAGCAACACATGCCTaGCTTTACTCTGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQRESATHA*LYSVSL
Trigger: TAAGGAAACAGAGTAAAGCCAGGCATGTGTTGCTGA...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
ENSMUST00000212358.2
CDS-3UTR CCA 90 bp GAGAGAAATAATCTCATCTTCAAATGCAGAATGCGTGTCAATATGGGCAGGAATTCAGCAACACATGCCTaGCTTTACTCTGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: ERNNLIFKCRMRVNMGRNSATHA*LYSVSL
Trigger: TAAGGAAACAGAGTAAAGCCAGGCATGTGTTGCTGA...ATTCCTGCCCATATTGACACGCATTCTGCATTTGAAGATGAGATTATTTCTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212358.2
ENSMUST00000212817.2
CDS-3UTR CCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAATACTGTGACACCCTCTaGATGCTTGAAATCCATAAC +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQREYCDTL*MLEIHN
Trigger: GTTATGGATTTCAAGCATCCAGAGGGTGTCACAGTA...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp GCATTTATGATCACCACACACACCATGTTTACTTATTTGTTCGCTTGTACCAGCAATTGCTCAGACGCTTaGACGGTATCAAATTTTCGA +
Preference number: 4 (lower is better)
Translates to: AFMITTHTMFTYLFACTSNCSDA*TVSNFR
Trigger: TCGAAAATTTGATACCGTCCAAGCGTCTGAGCAATT...GCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATCATAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CCA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTCACTATGGAACCACTTaGCAAAGCTTTCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVHYGTT*QSFQEL
Trigger: GAGTTCCTGAAAGCTTTGCCAAGTGGTTCCATAGTG...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAACACTATGGAACCACTTaGCAAAGCTTTCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: TPSSSDTSLLSRNIHFIKHYGTT*QSFQEL
Trigger: GAGTTCCTGAAAGCTTTGCCAAGTGGTTCCATAGTG...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
3UTR CAA 72 bp TGGCTACGATCACACCCAATCATATATAAGTCCTTGTaGATGCCAAGGTATTTTCCATTTCCACATCCGATA +
Preference number: 4 (lower is better)
Translates to: WLRSHPIIYKSL*MPRYFPFPHPI
Trigger: TATCGGATGTGGAAATGGAAAATACCTTGGCATCAACAAGGACTTATATATGATTGGGTGTGATCGTAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
CDS-3UTR TCA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTCGAGGTGTAATTCCATaGGTCCAAAGGTATCTAGAT +
Preference number: 4 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVRGVIP*VQRYLD
Trigger: ATCTAGATACCTTTGGACTCATGGAATTACACCTCG...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR TCA 90 bp TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTATATGTCTTGTGCTGCTaGAGTGACTTGCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: SIHLHPNLFYLFTTSLLVYVLCC*SDLQSH
Trigger: ATGAGATTGCAAGTCACTTCAGCAGCACAAGACATA...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR TCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAAGCACATCTTGGGAATaGAAGCAGGTCCTATTTATA +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQRESTSWE*KQVLFI
Trigger: TATAAATAGGACCTGCTTTCATTCCCAAGATGTGCT...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTAAGACACTGCTTGGATaGCTTCATGTTTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVKTLLG*LHVSAT
Trigger: TGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTT...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
ENSMUST00000212358.2
CDS-3UTR GCA 90 bp ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAAAGTGGGATAAGACACTaGTTGGATGCCTTCATGTTT +
Preference number: 4 (lower is better)
Translates to: TPSSSDTSLLSRNIHFIKSGIRH*LDAFMF
Trigger: AAACATGAAGGCATCCAAGCAGTGTCTTATCCCACT...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTAGTGGGATAAGACACTaGTTGGATGCCTTCATGTTT +
Preference number: 4 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVSGIRH*LDAFMF
Trigger: AAACATGAAGGCATCCAAGCAGTGTCTTATCCCACT...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
ENSMUST00000212358.2
CDS-3UTR GCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAACAACTTCTCCAAAATaGTACTGCAAACCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQRETTSPK*YCKPQE
Trigger: TTCCTGAGGTTTGCAGTAGCATTTTGGAGAAGTTGT...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
CDS-3UTR GCA 90 bp TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTAGTGACACCCTCTGGATaGTTGAAATCCATAACAATC +
Preference number: 4 (lower is better)
Translates to: SIHLHPNLFYLFTTSLLVVTPSG*LKSITI
Trigger: GATTGTTATGGATTTCAAGCATCCAGAGGGTGTCAC...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR GCA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTGTGACACCCTCTGGATaGTTGAAATCCATAACAATC +
Preference number: 4 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVVTPSG*LKSITI
Trigger: GATTGTTATGGATTTCAAGCATCCAGAGGGTGTCAC...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTGCTGCTGAAGTGACTTaGAATCTCATTGTACACTTG +
Preference number: 4 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVAAEVT*NLIVHL
Trigger: CAAGTGTACAATGAGATTGCAAGTCACTTCAGCAGC...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAAGCTGCTGAAGTGACTTaGAATCTCATTGTACACTTG +
Preference number: 4 (lower is better)
Translates to: TPSSSDTSLLSRNIHFIKAAEVT*NLIVHL
Trigger: CAAGTGTACAATGAGATTGCAAGTCACTTCAGCAGC...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTATCAGCAACACATGCCTaGCTTTACTCTGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: SIHLHPNLFYLFTTSLLVSATHA*LYSVSL
Trigger: TAAGGAAACAGAGTAAAGCCAGGCATGTGTTGCTGA...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAATCCTGCTACACCAGATaGTTCAATAGCTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQRESCYTR*FNSFVF
Trigger: AAAGACAAAGCTATTGAACCATCTGGTGTAGCAGGA...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp ATGACAAACATAGGTTCTTCAATTCATCTACACCCCAACCTCTTTTACTTGTTTAAGACACTGCTTGGATaGCTTCATGTTTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: MTNIGSSIHLHPNLFYLFKTLLG*LHVSAT
Trigger: TGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTT...AAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGAAGAACCTATGTTTGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR GCA 90 bp GGAACTTTCCTTGACTTATACTCTTCTTCCTTGGTGATACTACTGGAGTTGACACTTTATCCACAGTGTTaGTCTCATAGTGAAATTCAT +
Preference number: 4 (lower is better)
Translates to: GTFLDLYSSSLVILLELTLYPQC*SHSEIH
Trigger: ATGAATTTCACTATGAGAGCAACACTGTGGATAAAG...TGTCAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAAGTCAAGGAAAGTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
CDS-3UTR CCA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGTATTACAAATGCATATaGCTTATTAGGTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRYYKCI*LIRWHE
Trigger: CTCATGCCACCTAATAAGCCATATGCATTTGTAATA...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
ENSMUST00000212358.2
CDS-3UTR CCA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTAATTGCTCAGACGCTTaGACGGTATCAAATTTTCGA +
Preference number: 4 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVNCSDA*TVSNFR
Trigger: TCGAAAATTTGATACCGTCCAAGCGTCTGAGCAATT...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTCCTGCTACACCAGATaGTTCAATAGCTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVSCYTR*FNSFVF
Trigger: AAAGACAAAGCTATTGAACCATCTGGTGTAGCAGGA...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAACTTTATCCACAGTGTTaGTCTCATAGTGAAATTCAT +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQRELYPQC*SHSEIH
Trigger: ATGAATTTCACTATGAGAGCAACACTGTGGATAAAG...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
ENSMUST00000212358.2
CDS-3UTR CCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAATATTACAAATGCATATaGCTTATTAGGTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQREYYKCI*LIRWHE
Trigger: CTCATGCCACCTAATAAGCCATATGCATTTGTAATA...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
ENSMUST00000212358.2
CDS-3UTR CCA 90 bp ATGACAAACATAGGTTCTTCAATTCATCTACACCCCAACCTCTTTTACTTGTTTAATTGCTCAGACGCTTaGACGGTATCAAATTTTCGA +
Preference number: 4 (lower is better)
Translates to: MTNIGSSIHLHPNLFYLFNCSDA*TVSNFR
Trigger: TCGAAAATTTGATACCGTCCAAGCGTCTGAGCAATT...AAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGAAGAACCTATGTTTGTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CCA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAATCATCTTTATCTCCTTaGCTAATTCTCTTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: ILKRHVRGTYVYEVRQRESSLSP*LILFPL
Trigger: TAGAGGAAAGAGAATTAGCCAAGGAGATAAAGATGA...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR GCA 90 bp ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAACTTTATCCACAGTGTTaGTCTCATAGTGAAATTCAT +
Preference number: 4 (lower is better)
Translates to: TPSSSDTSLLSRNIHFIKLYPQC*SHSEIH
Trigger: ATGAATTTCACTATGAGAGCAACACTGTGGATAAAG...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CCA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATTACAAATGCATATaGCTTATTAGGTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVYYKCI*LIRWHE
Trigger: CTCATGCCACCTAATAAGCCATATGCATTTGTAATA...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
ENSMUST00000212358.2
3UTR CAA 72 bp GGTTCTTCAATTCATCTACACCCCAACCTCTTTTACTaGTTTACAACTTCACTCCTAGTATTTAATACTACT +
Preference number: 4 (lower is better)
Translates to: GSSIHLHPNLFY*FTTSLLVFNTT
Trigger: AGTAGTATTAAATACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGAAGAACC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CCA 90 bp ATGACAAACATAGGTTCTTCAATTCATCTACACCCCAACCTCTTTTACTTGTTTTATTACAAATGCATATaGCTTATTAGGTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: MTNIGSSIHLHPNLFYLFYYKCI*LIRWHE
Trigger: CTCATGCCACCTAATAAGCCATATGCATTTGTAATA...AAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGAAGAACCTATGTTTGTCAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CAA 90 bp CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGAGGGATAAGACACTGCTaGGATGCCTTCATGTTTCAG +
Preference number: 5 (lower is better)
Translates to: QAGLELRNSPASASRVLGGIRHC*DAFMFQ
Trigger: CTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCC...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGAAAATTGCTCAGACGCTaGGACGGTATCAAATTTTCG +
Preference number: 5 (lower is better)
Translates to: QAGLELRNSPASASRVLGKLLRR*DGIKFS
Trigger: CGAAAATTTGATACCGTCCAAGCGTCTGAGCAATTT...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp CAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTATACTCTTCTTCCTaGGTGATACTACTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: QAGLELRNSPASASRVLGLYSSS*VILLEL
Trigger: CAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAA...TCCCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp ACCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATGGTTCAATAGCTTaGTCTTTACCAGGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: TRLALNSEIRLPLPPECWDGSIA*SLPGFL
Trigger: AAGAAACCCTGGTAAAGACAAAGCTATTGAACCATC...CCAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp CCCTTCTTGAAGGTCAGCTCCCTAGGTACTTCGTTCTTGTTTCCTGCTGGTTTGGTGATACTACTGGAGTaGACAGACAATGCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: PFLKVSSLGTSFLFPAGLVILLE*TDNAGS
Trigger: AGACCCAGCATTGTCTGTCAACTCCAGTAGTATCAC...CAAACCAGCAGGAAACAAGAACGAAGTACCTAGGGAGCTGACCTTCAAGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS CCA 90 bp CCTGGAGGTAAGGCTTCAAGGCCCATGTTTTTCCATTGTGCTGAGTaGGATAAGACACTGCTTGGATGCCTTCATGTTTCAGCAACACAT +
Preference number: 5 (lower is better)
Translates to: PGGKASRPMFFHCAE*DKTLLGCLHVSATH
Trigger: ATGTGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCCACTCAGCACAATGGAAAAACATGGGCCTTGAAGCCTTACCTCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212817.2
CDS GCA 90 bp CTTCAAGGCCCATGTTTTTCCATTGTGCTGAGTGGGATAAGACACTaGTTGGATGCCTTCATGTTTCAGCAACACATGCCTGGCTTTACT +
Preference number: 5 (lower is better)
Translates to: LQGPCFSIVLSGIRH*LDAFMFQQHMPGFT
Trigger: AGTAAAGCCAGGCATGTGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCCACTCAGCACAATGGAAAAACATGGGCCTTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212817.2
CDS-3UTR CAA 90 bp CCAAGATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTGCGATGAAACACAGGACTaGGGTCAGGACATCCTGCTA +
Preference number: 5 (lower is better)
Translates to: PRCKLGRKGFIQLTLPYCDETQD*GQDILL
Trigger: TAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCATC...GCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCATCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
CDS-3UTR CAA 90 bp CCAAGATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTGCGTGATACTACTGGAGTaGACAGACAATGCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: PRCKLGRKGFIQLTLPYCVILLE*TDNAGS
Trigger: AGACCCAGCATTGTCTGTCAACTCCAGTAGTATCAC...GCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCATCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
CDS-3UTR CAA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGGGAACCAGCACATCTaGGGAATGAAAGCAGGTCCT +
Preference number: 5 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRGNQHI*GMKAGP
Trigger: AGGACCTGCTTTCATTCCCAAGATGTGCTGGTTCCC...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGTTACCAGGGTTTCTTTaGAGGTGCCAGGGAACCAGC +
Preference number: 5 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRLPGFL*RCQGTS
Trigger: GCTGGTTCCCTGGCACCTCAAAAGAAACCCTGGTAA...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS GCA 90 bp GGGCAGGAATTCCCCCAGGTAAGGGCTTGTCTTTATCCACAGTGTTaGTCTCATAGTGAAATTCATAGCCAAAATGTTTCACTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: GQEFPQVRACLYPQC*SHSEIHSQNVSLFC
Trigger: ACAGAAGAGTGAAACATTTTGGCTATGAATTTCACTATGAGAGCAACACTGTGGATAAAGACAAGCCCTTACCTGGGGGAATTCCTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212294.2
CDS CCA 90 bp CTGAGAGAAATAATCTCATCTTCAAATGCAGAATGCGTGTCAATATaGGCAGGAATTCCCCCAGGTAAGGGCTTGTCTTTATCCACAGTG +
Preference number: 5 (lower is better)
Translates to: LREIISSSNAECVSI*AGIPPGKGLSLSTV
Trigger: CACTGTGGATAAAGACAAGCCCTTACCTGGGGGAATTCCTGCCCATATTGACACGCATTCTGCATTTGAAGATGAGATTATTTCTCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGGGATAAGACACTGCTaGGATGCCTTCATGTTTCAG +
Preference number: 5 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRGIRHC*DAFMFQ
Trigger: CTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCC...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
ENSMUST00000212358.2
CDS-3UTR CAA 90 bp GGAACTTTCCTTGACTTATACTCTTCTTCCTTGGTGATACTACTGGAGTTGACAGGGATAAGACACTGCTaGGATGCCTTCATGTTTCAG +
Preference number: 5 (lower is better)
Translates to: GTFLDLYSSSLVILLELTGIRHC*DAFMFQ
Trigger: CTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCC...TGTCAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAAGTCAAGGAAAGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
CDS-3UTR CAA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGTGATACTACTGGAGTaGACAGACAATGCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRVILLE*TDNAGS
Trigger: AGACCCAGCATTGTCTGTCAACTCCAGTAGTATCAC...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp GATGTTACTGGCTTGCTTCCCCTGGCTTGCTTAGCTTGCTTTCATATAAAACCCTTATACTCTTCTTCCTaGGTGATACTACTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: DVTGLLPLACLACFHIKPLYSSS*VILLEL
Trigger: CAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAA...GGGTTTTATATGAAAGCAAGCTAAGCAAGCCAGGGGAAGCAAGCCAGTAACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
CDS-3UTR CAA 90 bp TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTAGGGAACCAGCACATCTaGGGAATGAAAGCAGGTCCT +
Preference number: 5 (lower is better)
Translates to: SIHLHPNLFYLFTTSLLVGNQHI*GMKAGP
Trigger: AGGACCTGCTTTCATTCCCAAGATGTGCTGGTTCCC...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CAA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTGGGAACCAGCACATCTaGGGAATGAAAGCAGGTCCT +
Preference number: 5 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVGNQHI*GMKAGP
Trigger: AGGACCTGCTTTCATTCCCAAGATGTGCTGGTTCCC...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAAGGGAACCAGCACATCTaGGGAATGAAAGCAGGTCCT +
Preference number: 5 (lower is better)
Translates to: TPSSSDTSLLSRNIHFIKGNQHI*GMKAGP
Trigger: AGGACCTGCTTTCATTCCCAAGATGTGCTGGTTCCC...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTTACCAGGGTTTCTTTaGAGGTGCCAGGGAACCAGC +
Preference number: 5 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVLPGFL*RCQGTS
Trigger: GCTGGTTCCCTGGCACCTCAAAAGAAACCCTGGTAA...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAGATGAAACACAGGACTaGGGTCAGGACATCCTGCTA +
Preference number: 5 (lower is better)
Translates to: ILKRHVRGTYVYEVRQREDETQD*GQDILL
Trigger: TAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCATC...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp TTCTGGCTAAAGTGTTTCTGGGCAGGCATCCAGAATGTAATAGCAAGATGCAGTAATCTCATTGTACACTaGATGGACATGCTTTTGCTC +
Preference number: 5 (lower is better)
Translates to: FWLKCFWAGIQNVIARCSNLIVH*MDMLLL
Trigger: GAGCAAAAGCATGTCCATCAAGTGTACAATGAGATT...ACTGCATCTTGCTATTACATTCTGGATGCCTGCCCAGAAACACTTTAGCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CAA 90 bp CCAAGATGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATATTGCAATCTCATTGTACACTaGATGGACATGCTTTTGCTC +
Preference number: 5 (lower is better)
Translates to: PRCKLGRKGFIQLTLPYCNLIVH*MDMLLL
Trigger: GAGCAAAAGCATGTCCATCAAGTGTACAATGAGATT...GCAATATGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCATCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211933.2
CDS-3UTR CAA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTGATGAAACACAGGACTaGGGTCAGGACATCCTGCTA +
Preference number: 5 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVDETQD*GQDILL
Trigger: TAGCAGGATGTCCTGACCCAAGTCCTGTGTTTCATC...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTAGGGATAAGACACTGCTaGGATGCCTTCATGTTTCAG +
Preference number: 5 (lower is better)
Translates to: SIHLHPNLFYLFTTSLLVGIRHC*DAFMFQ
Trigger: CTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCC...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CAA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTGGGATAAGACACTGCTaGGATGCCTTCATGTTTCAG +
Preference number: 5 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVGIRHC*DAFMFQ
Trigger: CTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCC...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
ENSMUST00000212358.2
CDS-3UTR CAA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGCAAAGTCAAAAGCAGTaGTTTCCTACTCACGCCATT +
Preference number: 5 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRQSQKQ*FPTHAI
Trigger: AATGGCGTGAGTAGGAAACAACTGCTTTTGACTTTG...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
ENSMUST00000212358.2
CDS-3UTR CAA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGAAATTGCTCAGACGCTaGGACGGTATCAAATTTTCG +
Preference number: 5 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRKLLRR*DGIKFS
Trigger: CGAAAATTTGATACCGTCCAAGCGTCTGAGCAATTT...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp GCATTTATGATCACCACACACACCATGTTTACTTATTTGTTCGCTTGTACCAGCAAATTGCTCAGACGCTaGGACGGTATCAAATTTTCG +
Preference number: 5 (lower is better)
Translates to: AFMITTHTMFTYLFACTSKLLRR*DGIKFS
Trigger: CGAAAATTTGATACCGTCCAAGCGTCTGAGCAATTT...GCTGGTACAAGCGAACAAATAAGTAAACATGGTGTGTGTGGTGATCATAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CAA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAACAAAGTCAAAAGCAGTaGTTTCCTACTCACGCCATT +
Preference number: 5 (lower is better)
Translates to: ILKRHVRGTYVYEVRQREQSQKQ*FPTHAI
Trigger: AATGGCGTGAGTAGGAAACAACTGCTTTTGACTTTG...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
ENSMUST00000212358.2
CDS-3UTR CAA 90 bp TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTAACACCCTCTGGATGCTaGAAATCCATAACAATCGCT +
Preference number: 5 (lower is better)
Translates to: SIHLHPNLFYLFTTSLLVTPSGC*KSITIA
Trigger: AGCGATTGTTATGGATTTCAAGCATCCAGAGGGTGT...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CAA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTACACCCTCTGGATGCTaGAAATCCATAACAATCGCT +
Preference number: 5 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVTPSGC*KSITIA
Trigger: AGCGATTGTTATGGATTTCAAGCATCCAGAGGGTGT...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAAACACCCTCTGGATGCTaGAAATCCATAACAATCGCT +
Preference number: 5 (lower is better)
Translates to: TPSSSDTSLLSRNIHFIKTPSGC*KSITIA
Trigger: AGCGATTGTTATGGATTTCAAGCATCCAGAGGGTGT...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp ACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGATGGTTCAATAGCTTaGTCTTTACCAGGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: TILKRHVRGTYVYEVRQRDGSIA*SLPGFL
Trigger: AAGAAACCCTGGTAAAGACAAAGCTATTGAACCATC...CCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS CCA 90 bp TGCTTTCTTGGATTCTTCAATAGTTTGGAATATTACAAATGCATATaGCTTATTAGGTGGCATGAGGAGAGCTTCCACAGGTCCACATTT +
Preference number: 5 (lower is better)
Translates to: CFLGFFNSLEYYKCI*LIRWHEESFHRSTF
Trigger: AAATGTGGACCTGTGGAAGCTCTCCTCATGCCACCTAATAAGCCATATGCATTTGTAATATTCCAAACTATTGAAGAATCCAAGAAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212154.2
ENSMUST00000212294.2
ENSMUST00000212358.2
CDS-3UTR CAA 90 bp ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAACAAAGTCAAAAGCAGTaGTTTCCTACTCACGCCATT +
Preference number: 5 (lower is better)
Translates to: TPSSSDTSLLSRNIHFIKQSQKQ*FPTHAI
Trigger: AATGGCGTGAGTAGGAAACAACTGCTTTTGACTTTG...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTCAAAGTCAAAAGCAGTaGTTTCCTACTCACGCCATT +
Preference number: 5 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVQSQKQ*FPTHAI
Trigger: AATGGCGTGAGTAGGAAACAACTGCTTTTGACTTTG...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
ENSMUST00000212358.2
CDS-3UTR CAA 90 bp ATGACAAACATAGGTTCTTCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACACCCTCTGGATGCTaGAAATCCATAACAATCGCT +
Preference number: 5 (lower is better)
Translates to: MTNIGSSIHLHPNLFYLFTPSGC*KSITIA
Trigger: AGCGATTGTTATGGATTTCAAGCATCCAGAGGGTGT...AAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGAAGAACCTATGTTTGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CAA 90 bp ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAAAAATTGCTCAGACGCTaGGACGGTATCAAATTTTCG +
Preference number: 5 (lower is better)
Translates to: TPSSSDTSLLSRNIHFIKKLLRR*DGIKFS
Trigger: CGAAAATTTGATACCGTCCAAGCGTCTGAGCAATTT...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAATTATACTCTTCTTCCTaGGTGATACTACTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: ILKRHVRGTYVYEVRQRELYSSS*VILLEL
Trigger: CAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAA...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp ATACTTAAAAGGCATGTAAGAGGAACCTACGTTTATGAAGTCAGACAACGGGAAGATGGTTCAATAGCTTaGTCTTTACCAGGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: ILKRHVRGTYVYEVRQREDGSIA*SLPGFL
Trigger: AAGAAACCCTGGTAAAGACAAAGCTATTGAACCATC...TTCCCGTTGTCTGACTTCATAAACGTAGGTTCCTCTTACATGCCTTTTAAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS GCA 90 bp AAAATATGCTTTCTTGGATTCTTCAATAGTTTGGAATATTACAAATaGATATGGCTTATTAGGTGGCATGAGGAGAGCTTCCACAGGTCC +
Preference number: 5 (lower is better)
Translates to: KICFLGFFNSLEYYK*IWLIRWHEESFHRS
Trigger: GGACCTGTGGAAGCTCTCCTCATGCCACCTAATAAGCCATATGCATTTGTAATATTCCAAACTATTGAAGAATCCAAGAAAGCATATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212154.2
ENSMUST00000212294.2
ENSMUST00000212358.2
CDS-3UTR CAA 90 bp CACAAGTTAATGTCAAACACCATACTTAAAAGGCATGTAAGAGGAACCTACGTTAATCTCATTGTACACTaGATGGACATGCTTTTGCTC +
Preference number: 5 (lower is better)
Translates to: HKLMSNTILKRHVRGTYVNLIVH*MDMLLL
Trigger: GAGCAAAAGCATGTCCATCAAGTGTACAATGAGATT...AACGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS-3UTR CAA 90 bp TCAATTCATCTACACCCCAACCTCTTTTACTTGTTTACAACTTCACTCCTAGTATTATACTCTTCTTCCTaGGTGATACTACTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: SIHLHPNLFYLFTTSLLVLYSSS*VILLEL
Trigger: CAACTCCAGTAGTATCACCAAGGAAGAAGAGTATAA...TACTAGGAGTGAAGTTGTAAACAAGTAAAAGAGGTTGGGGTGTAGATGAATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
CDS-3UTR CAA 90 bp ACACCCAGCTCTTCAGATACTTCCTTATTGTCCAGGAATATTCACTTCATTAAAGATGGTTCAATAGCTTaGTCTTTACCAGGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: TPSSSDTSLLSRNIHFIKDGSIA*SLPGFL
Trigger: AAGAAACCCTGGTAAAGACAAAGCTATTGAACCATC...TTTAATGAAGTGAATATTCCTGGACAATAAGGAAGTATCTGAAGAGCTGGGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053407.13
ENSMUST00000211933.2
ENSMUST00000212294.2
CDS CAA 90 bp CAAGGCCCATGTTTTTCCATTGTGCTGAGTGGGATAAGACACTGCTaGGATGCCTTCATGTTTCAGCAACACATGCCTGGCTTTACTCTG +
Preference number: 6 (lower is better)
Translates to: QGPCFSIVLSGIRHC*DAFMFQQHMPGFTL
Trigger: CAGAGTAAAGCCAGGCATGTGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCCACTCAGCACAATGGAAAAACATGGGCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212817.2
CDS GCA 72 bp ATTGGCAATAACCAGGCTCTGAGTGGGATAAGACACTaGTTGGATGCCTTCATGTTTCAGCAACACATGCCT +
Preference number: 6 (lower is better)
Translates to: IGNNQALSGIRH*LDAFMFQQHMP
Trigger: AGGCATGTGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCCACTCAGAGCCTGGTTATTGCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212154.2
ENSMUST00000212294.2
ENSMUST00000212358.2
CDS GCA 72 bp CCATGTTTTTCCATTGTGCTGAGTGGGATAAGACACTaGTTGGATGCCTTCATGTTTCAGCAACACATGCCT +
Preference number: 6 (lower is better)
Translates to: PCFSIVLSGIRH*LDAFMFQQHMP
Trigger: AGGCATGTGTTGCTGAAACATGAAGGCATCCAAGCAGTGTCTTATCCCACTCAGCACAATGGAAAAACATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212817.2
CDS GCA 72 bp GACACTGCTTGGATGCCTTCATGTTTCAGCAACACATaGCTGGCTTTACTCTGTTTCCTTAAGAACTTCTTT +
Preference number: 6 (lower is better)
Translates to: DTAWMPSCFSNT*LALLCFLKNFF
Trigger: AAAGAAGTTCTTAAGGAAACAGAGTAAAGCCAGGCATGTGTTGCTGAAACATGAAGGCATCCAAGCAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212154.2
ENSMUST00000212294.2
ENSMUST00000212358.2
ENSMUST00000212817.2
CDS CCA 72 bp CTGCTTGGATGCCTTCATGTTTCAGCAACACATGCCTaGCTTTACTCTGTTTCCTTAAGAACTTCTTTTCCA +
Preference number: 6 (lower is better)
Translates to: LLGCLHVSATHA*LYSVSLRTSFP
Trigger: TGGAAAAGAAGTTCTTAAGGAAACAGAGTAAAGCCAGGCATGTGTTGCTGAAACATGAAGGCATCCAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000053407.13
ENSMUST00000165105.2
ENSMUST00000211933.2
ENSMUST00000212154.2
ENSMUST00000212294.2
ENSMUST00000212358.2
ENSMUST00000212817.2
CDS CCA 72 bp ATAATCTCATCTTCAAATGCAGAATGCGTGTCAATATaGGCAGGAATTCCCCCAGGTAAGGGCTTGTCTTTA +
Preference number: 6 (lower is better)
Translates to: IISSSNAECVSI*AGIPPGKGLSL
Trigger: TAAAGACAAGCCCTTACCTGGGGGAATTCCTGCCCATATTGACACGCATTCTGCATTTGAAGATGAGATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212294.2
CDS GCA 72 bp AACCCCCAGGTAAGGGCTTGTCTTTATCCACAGTGTTaGTCTCATAGTGAAATTCATAGCCAAAATGTTTCA +
Preference number: 6 (lower is better)
Translates to: NPQVRACLYPQC*SHSEIHSQNVS
Trigger: TGAAACATTTTGGCTATGAATTTCACTATGAGAGCAACACTGTGGATAAAGACAAGCCCTTACCTGGGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212358.2
CDS GCA 72 bp TTCCCCCAGGTAAGGGCTTGTCTTTATCCACAGTGTTaGTCTCATAGTGAAATTCATAGCCAAAATGTTTCA +
Preference number: 6 (lower is better)
Translates to: FPQVRACLYPQC*SHSEIHSQNVS
Trigger: TGAAACATTTTGGCTATGAATTTCACTATGAGAGCAACACTGTGGATAAAGACAAGCCCTTACCTGGGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212294.2