Pregenerated sensors for ALKBH6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042831Ensembl transcript IDs: ENSMUST00000060834.12, ENSMUST00000136887.8, ENSMUST00000137550.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGCGCAGCACACGGGGCACGCGGCGAATGGTCAGTGAGACACGGGTaGCGCGCACCAGGTGGGCTCCGGGCAGCGCTGACTTGCAAGCGG | + |
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Preference number: 1 (lower is better) Translates to: RAAHGARGEWSVRHG*RAPGGLRAALTCKR Trigger: CCGCTTGCAAGTCAGCGCTGCCCGGAGCCCACCTGGTGCGCGGCACCCGTGTCTCACTGACCATTCGCCGCGTGCCCCGTGTGCTGCGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| 3UTR CCA 90 bp | TGCCGCGCACCAGGTGGGCTCCGGGCAGCGCTGACTTGCAAGCGGTaGCATTGGGTGGCAGCGAGGTGGCGTCCAGCTCATCCACACGGG | + |
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Preference number: 1 (lower is better) Translates to: CRAPGGLRAALTCKR*HWVAARWRPAHPHG Trigger: CCCGTGTGGATGAGCTGGACGCCACCTCGCTGCCACCCAATGCCACCGCTTGCAAGTCAGCGCTGCCCGGAGCCCACCTGGTGCGCGGCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| 3UTR GCA 90 bp | AGACACGGGTGCCGCGCACCAGGTGGGCTCCGGGCAGCGCTGACTTaGAAGCGGTGGCATTGGGTGGCAGCGAGGTGGCGTCCAGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: RHGCRAPGGLRAALT*KRWHWVAARWRPAH Trigger: ATGAGCTGGACGCCACCTCGCTGCCACCCAATGCCACCGCTTGCAAGTCAGCGCTGCCCGGAGCCCACCTGGTGCGCGGCACCCGTGTCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| 3UTR CCA 90 bp | GAGCAGGCGTGTGTAAGCTGTGCCCCGGAGCACCAGCAGGCTCCGTaGTTCCACCAGCAGCGAGGTGATGGGCCGTTGAGGAGGCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: EQACVSCAPEHQQAP*FHQQRGDGPLRRPG Trigger: CCCAGGCCTCCTCAACGGCCCATCACCTCGCTGCTGGTGGAACCACGGAGCCTGCTGGTGCTCCGGGGCACAGCTTACACACGCCTGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| 3UTR TCA 90 bp | ATTGGGTGGCAGCGAGGTGGCGTCCAGCTCATCCACACGGGTAGCTaGGATGCCGTGGAGCAGGCGTGTGTAAGCTGTGCCCCGGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: IGWQRGGVQLIHTGS*DAVEQACVSCAPEH Trigger: GTGCTCCGGGGCACAGCTTACACACGCCTGCTCCACGGCATCTCAGCTACCCGTGTGGATGAGCTGGACGCCACCTCGCTGCCACCCAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| 3UTR TCA 90 bp | ACCAGCAGGCTCCGTGGTTCCACCAGCAGCGAGGTGATGGGCCGTTaGGGAGGCCTGGGCTGCTCCATAGGGACATCATCGTCTGGCTGT | + |
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Preference number: 1 (lower is better) Translates to: TSRLRGSTSSEVMGR*GGLGCSIGTSSSGC Trigger: ACAGCCAGACGATGATGTCCCTATGGAGCAGCCCAGGCCTCCTCAACGGCCCATCACCTCGCTGCTGGTGGAACCACGGAGCCTGCTGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| 3UTR CCA 90 bp | GGGCCGTTGAGGAGGCCTGGGCTGCTCCATAGGGACATCATCGTCTaGCTGTCGAGGTTCATAGAAATCGAGGACAGTATGGGAGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: GPLRRPGLLHRDIIV*LSRFIEIEDSMGAQ Trigger: CTGGGCTCCCATACTGTCCTCGATTTCTATGAACCTCGACAGCCAGACGATGATGTCCCTATGGAGCAGCCCAGGCCTCCTCAACGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| 3UTR CCA 90 bp | GAAATCGAGGACAGTATGGGAGCCCAGGCTGATGGTGCTGACAGTTaGGTAGTACAGTGGTCCATCTTCATGAGGCTGGGGAGGAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: EIEDSMGAQADGADS*VVQWSIFMRLGRKG Trigger: CCCCTTCCTCCCCAGCCTCATGAAGATGGACCACTGTACTACCCAACTGTCAGCACCATCAGCCTGGGCTCCCATACTGTCCTCGATTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| 3UTR-3UTR CCA 90 bp | ACACGGGTGCCGCGCACCAGGTGGGCTCCGGGCAGCGCTGACTTGCAAGCGGTGCACCAGCAGGCTCCGTaGTTCCACCAGCAGCGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: TRVPRTRWAPGSADLQAVHQQAP*FHQQRG Trigger: ACCTCGCTGCTGGTGGAACCACGGAGCCTGCTGGTG...CACCGCTTGCAAGTCAGCGCTGCCCGGAGCCCACCTGGTGCGCGGCACCCGTGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| 3UTR-3UTR CCA 90 bp | GGCACGCGGCGAATGGTCAGTGAGACACGGGTGCCGCGCACCAGGTGGGCTCCGAAATCGAGGACAGTATaGGAGCCCAGGCTGATGGTG | + |
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Preference number: 2 (lower is better) Translates to: GTRRMVSETRVPRTRWAPKSRTV*EPRLMV Trigger: CACCATCAGCCTGGGCTCCCATACTGTCCTCGATTT...CGGAGCCCACCTGGTGCGCGGCACCCGTGTCTCACTGACCATTCGCCGCGTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCCCCGGAGCACCAGCAGGCTCCGTGGTTCCACCAGCAGCGAGGTGATGGGCGATGGTGCTGACAGTTaGGTAGTACAGTGGTCCATC | + |
|
Preference number: 2 (lower is better) Translates to: VPRSTSRLRGSTSSEVMGDGADS*VVQWSI Trigger: GATGGACCACTGTACTACCCAACTGTCAGCACCATC...GCCCATCACCTCGCTGCTGGTGGAACCACGGAGCCTGCTGGTGCTCCGGGGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCACCAGCAGGCTCCGTGGTTCCACCAGCAGCGAGGTGATGGGCCGTTGAGGAGTTGGGTAGTACAGTaGTCCATCTTCATGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: EHQQAPWFHQQRGDGPLRSWVVQ*SIFMRL Trigger: CAGCCTCATGAAGATGGACCACTGTACTACCCAACT...CCTCAACGGCCCATCACCTCGCTGCTGGTGGAACCACGGAGCCTGCTGGTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| 3UTR TCA 72 bp | GGCGCGCAGCACACGGGGCACGCGGCGAATGGTCAGTaGGACACGGGTGCCGCGCACCAGGTGGGCTCCGGG | + |
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Preference number: 3 (lower is better) Translates to: GAQHTGHAANGQ*DTGAAHQVGSG Trigger: CCCGGAGCCCACCTGGTGCGCGGCACCCGTGTCTCACTGACCATTCGCCGCGTGCCCCGTGTGCTGCGCGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| 3UTR GCA 72 bp | CACGGGGCACGCGGCGAATGGTCAGTGAGACACGGGTaGCGCGCACCAGGTGGGCTCCGGGCAGCGCTGACT | + |
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Preference number: 3 (lower is better) Translates to: HGARGEWSVRHG*RAPGGLRAALT Trigger: AGTCAGCGCTGCCCGGAGCCCACCTGGTGCGCGGCACCCGTGTCTCACTGACCATTCGCCGCGTGCCCCGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| 3UTR TCA 72 bp | ACGGGTGCCGCGCACCAGGTGGGCTCCGGGCAGCGCTaGCTTGCAAGCGGTGGCATTGGGTGGCAGCGAGGT | + |
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Preference number: 3 (lower is better) Translates to: TGAAHQVGSGQR*LASGGIGWQRG Trigger: ACCTCGCTGCCACCCAATGCCACCGCTTGCAAGTCAGCGCTGCCCGGAGCCCACCTGGTGCGCGGCACCCGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| 3UTR GCA 72 bp | TGCCGCGCACCAGGTGGGCTCCGGGCAGCGCTGACTTaGAAGCGGTGGCATTGGGTGGCAGCGAGGTGGCGT | + |
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Preference number: 3 (lower is better) Translates to: CRAPGGLRAALT*KRWHWVAARWR Trigger: ACGCCACCTCGCTGCCACCCAATGCCACCGCTTGCAAGTCAGCGCTGCCCGGAGCCCACCTGGTGCGCGGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| 3UTR CCA 72 bp | TGTGTAAGCTGTGCCCCGGAGCACCAGCAGGCTCCGTaGTTCCACCAGCAGCGAGGTGATGGGCCGTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: CVSCAPEHQQAP*FHQQRGDGPLR Trigger: CCTCAACGGCCCATCACCTCGCTGCTGGTGGAACCACGGAGCCTGCTGGTGCTCCGGGGCACAGCTTACACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| 3UTR TCA 72 bp | CAGCGAGGTGGCGTCCAGCTCATCCACACGGGTAGCTaGGATGCCGTGGAGCAGGCGTGTGTAAGCTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: QRGGVQLIHTGS*DAVEQACVSCA Trigger: GGCACAGCTTACACACGCCTGCTCCACGGCATCTCAGCTACCCGTGTGGATGAGCTGGACGCCACCTCGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| 3UTR CCA 72 bp | GCCCAGGCTGATGGTGCTGACAGTTGGGTAGTACAGTaGTCCATCTTCATGAGGCTGGGGAGGAAGGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: AQADGADSWVVQ*SIFMRLGRKGA Trigger: TGCCCCCTTCCTCCCCAGCCTCATGAAGATGGACCACTGTACTACCCAACTGTCAGCACCATCAGCCTGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| CDS-3UTR TCA 90 bp | GCAGGCGTGTGTAAGCTGTGCCCCGGAGCACCAGCAGGCTCCGTGGTTCCACCAGGGAGGACCGCGCCATaGTGCCCTCCCCAGGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: AGVCKLCPGAPAGSVVPPGRTAP*CPPQAD Trigger: ATCTGCCTGGGGAGGGCATCATGGCGCGGTCCTCCC...TGGTGGAACCACGGAGCCTGCTGGTGCTCCGGGGCACAGCTTACACACGCCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| CDS-3UTR GCA 90 bp | AGACACGGGTGCCGCGCACCAGGTGGGCTCCGGGCAGCGCTGACTTGCAAGCGGCCTGAAAGGTTCCAGTaGTGGGACCCTGGCGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: RHGCRAPGGLRAALTCKRPERFQ*WDPGVL Trigger: CAGGACGCCAGGGTCCCAGCACTGGAACCTTTCAGG...CCGCTTGCAAGTCAGCGCTGCCCGGAGCCCACCTGGTGCGCGGCACCCGTGTCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| CDS-3UTR CCA 90 bp | ACACGGGTGCCGCGCACCAGGTGGGCTCCGGGCAGCGCTGACTTGCAAGCGGTGTTCCTCCCAGACAGCTaGGTCCACTTTGGCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRVPRTRWAPGSADLQAVFLPDS*VHFGFG Trigger: CCCAAAGCCAAAGTGGACCCAGCTGTCTGGGAGGAA...CACCGCTTGCAAGTCAGCGCTGCCCGGAGCCCACCTGGTGCGCGGCACCCGTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| CDS-3UTR CCA 90 bp | GAGCACCAGCAGGCTCCGTGGTTCCACCAGCAGCGAGGTGATGGGCCGTTGAGGGAAAGGTTCCAGTGCTaGGACCCTGGCGTCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: EHQQAPWFHQQRGDGPLRERFQC*DPGVLL Trigger: GAGCAGGACGCCAGGGTCCCAGCACTGGAACCTTTC...CCTCAACGGCCCATCACCTCGCTGCTGGTGGAACCACGGAGCCTGCTGGTGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| CDS-3UTR CCA 90 bp | CGGGTGCCGCGCACCAGGTGGGCTCCGGGCAGCGCTGACTTGCAAGCGGTGGCAGGTCCACTTTGGCTTTaGGGCATTGAAAACCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: RVPRTRWAPGSADLQAVAGPLWL*GIENLS Trigger: CGACAGGTTTTCAATGCCCCAAAGCCAAAGTGGACC...TGCCACCGCTTGCAAGTCAGCGCTGCCCGGAGCCCACCTGGTGCGCGGCACCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| CDS-3UTR CCA 90 bp | GCGCGCAGCACACGGGGCACGCGGCGAATGGTCAGTGAGACACGGGTGCCGCGCTCCCCAGGCAGATACTaGTTCACAAGGACATGGTTA | + |
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Preference number: 4 (lower is better) Translates to: ARSTRGTRRMVSETRVPRSPGRY*FTRTWL Trigger: TAACCATGTCCTTGTGAACCAGTATCTGCCTGGGGA...GCGCGGCACCCGTGTCTCACTGACCATTCGCCGCGTGCCCCGTGTGCTGCGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| CDS-3UTR CCA 90 bp | CCGGAGCACCAGCAGGCTCCGTGGTTCCACCAGCAGCGAGGTGATGGGCCGTTGTGGTTCACAAGGACATaGTTAGCTGGGAGACCCCCA | + |
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Preference number: 4 (lower is better) Translates to: PEHQQAPWFHQQRGDGPLWFTRT*LAGRPP Trigger: TGGGGGTCTCCCAGCTAACCATGTCCTTGTGAACCA...CAACGGCCCATCACCTCGCTGCTGGTGGAACCACGGAGCCTGCTGGTGCTCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| CDS-3UTR CCA 90 bp | TCCATGGTTTCCATAGTTACTGGGGAAATAAATAACCCTGGACAGCTACCTCTGTGCTCAGCAGGAGGCTaGCGCGCAGCACACGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SMVSIVTGEINNPGQLPLCSAGG*RAAHGA Trigger: TGCCCCGTGTGCTGCGCGCCAGCCTCCTGCTGAGCA...CAGAGGTAGCTGTCCAGGGTTATTTATTTCCCCAGTAACTATGGAAACCATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR TCA 90 bp | ATCATCGTCTGGCTGTCGAGGTTCATAGAAATCGAGGACAGTATGGGAGCCCAGGACCCCCAAAAAGGCTaGGGTCAGACACTTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: IIVWLSRFIEIEDSMGAQDPQKG*GQTLCP Trigger: TGGACAAAGTGTCTGACCTCAGCCTTTTTGGGGGTC...CTGGGCTCCCATACTGTCCTCGATTTCTATGAACCTCGACAGCCAGACGATGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| CDS-3UTR CCA 90 bp | TTCTCCATGGTTTCCATAGTTACTGGGGAAATAAATAACCCTGGACAGCTACCTGGGGCACGCGGCGAATaGTCAGTGAGACACGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: FSMVSIVTGEINNPGQLPGARGE*SVRHGC Trigger: GCACCCGTGTCTCACTGACCATTCGCCGCGTGCCCC...AGGTAGCTGTCCAGGGTTATTTATTTCCCCAGTAACTATGGAAACCATGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR TCA 90 bp | GGAGCCCAGGCTGATGGTGCTGACAGTTGGGTAGTACAGTGGTCCATCTTCATGTTGGCTTTGGGGCATTaGAAACCTGTCGAAGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: GAQADGADSWVVQWSIFMLALGH*KPVEAN Trigger: ATTTGCTTCGACAGGTTTTCAATGCCCCAAAGCCAA...CATGAAGATGGACCACTGTACTACCCAACTGTCAGCACCATCAGCCTGGGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| CDS-3UTR TCA 90 bp | TCTGTTTATTTGGAATGGTGTCTTCTCCATGGTTTCCATAGTTACTGGGGAAATGCGGCGAATGGTCAGTaGGACACGGGTGCCGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: SVYLEWCLLHGFHSYWGNAANGQ*DTGAAH Trigger: GTGCGCGGCACCCGTGTCTCACTGACCATTCGCCGC...ATTTCCCCAGTAACTATGGAAACCATGGAGAAGACACCATTCCAAATAAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR GCA 90 bp | TCCATGGTTTCCATAGTTACTGGGGAAATAAATAACCCTGGACAGCTACCTCTGCCTGAAAGGTTCCAGTaGTGGGACCCTGGCGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SMVSIVTGEINNPGQLPLPERFQ*WDPGVL Trigger: CAGGACGCCAGGGTCCCAGCACTGGAACCTTTCAGG...CAGAGGTAGCTGTCCAGGGTTATTTATTTCCCCAGTAACTATGGAAACCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR TCA 90 bp | TCCATGGTTTCCATAGTTACTGGGGAAATAAATAACCCTGGACAGCTACCTCTGCATCTTCATGAGGCATaGTGCCCTCCCCAGGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SMVSIVTGEINNPGQLPLHLHEA*CPPQAD Trigger: ATCTGCCTGGGGAGGGCATCATGCCTCATGAAGATG...CAGAGGTAGCTGTCCAGGGTTATTTATTTCCCCAGTAACTATGGAAACCATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR GCA 90 bp | GTTTATTTGGAATGGTGTCTTCTCCATGGTTTCCATAGTTACTGGGGAAATAAATCAGTGAGACACGGGTaGCGCGCACCAGGTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: VYLEWCLLHGFHSYWGNKSVRHG*RAPGGL Trigger: GAGCCCACCTGGTGCGCGGCACCCGTGTCTCACTGA...TTTATTTCCCCAGTAACTATGGAAACCATGGAGAAGACACCATTCCAAATAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR CCA 90 bp | TCTGTTTATTTGGAATGGTGTCTTCTCCATGGTTTCCATAGTTACTGGGGAAATCACCAGCAGGCTCCGTaGTTCCACCAGCAGCGAGGT | + |
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Preference number: 4 (lower is better) Translates to: SVYLEWCLLHGFHSYWGNHQQAP*FHQQRG Trigger: ACCTCGCTGCTGGTGGAACCACGGAGCCTGCTGGTG...ATTTCCCCAGTAACTATGGAAACCATGGAGAAGACACCATTCCAAATAAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR CCA 90 bp | TCTGTTTATTTGGAATGGTGTCTTCTCCATGGTTTCCATAGTTACTGGGGAAATGAAAGGTTCCAGTGCTaGGACCCTGGCGTCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: SVYLEWCLLHGFHSYWGNERFQC*DPGVLL Trigger: GAGCAGGACGCCAGGGTCCCAGCACTGGAACCTTTC...ATTTCCCCAGTAACTATGGAAACCATGGAGAAGACACCATTCCAAATAAACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR CCA 90 bp | TTCTCCATGGTTTCCATAGTTACTGGGGAAATAAATAACCCTGGACAGCTACCTTTCCTCCCAGACAGCTaGGTCCACTTTGGCTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: FSMVSIVTGEINNPGQLPFLPDS*VHFGFG Trigger: CCCAAAGCCAAAGTGGACCCAGCTGTCTGGGAGGAA...AGGTAGCTGTCCAGGGTTATTTATTTCCCCAGTAACTATGGAAACCATGGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR CCA 90 bp | TCCATGGTTTCCATAGTTACTGGGGAAATAAATAACCCTGGACAGCTACCTCTGTGGTTCACAAGGACATaGTTAGCTGGGAGACCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SMVSIVTGEINNPGQLPLWFTRT*LAGRPP Trigger: TGGGGGTCTCCCAGCTAACCATGTCCTTGTGAACCA...CAGAGGTAGCTGTCCAGGGTTATTTATTTCCCCAGTAACTATGGAAACCATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR TCA 90 bp | GTCTTCTCCATGGTTTCCATAGTTACTGGGGAAATAAATAACCCTGGACAGCTAGACCCCCAAAAAGGCTaGGGTCAGACACTTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: VFSMVSIVTGEINNPGQLDPQKG*GQTLCP Trigger: TGGACAAAGTGTCTGACCTCAGCCTTTTTGGGGGTC...TAGCTGTCCAGGGTTATTTATTTCCCCAGTAACTATGGAAACCATGGAGAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR CCA 90 bp | TTCTCCATGGTTTCCATAGTTACTGGGGAAATAAATAACCCTGGACAGCTACCTAAATCGAGGACAGTATaGGAGCCCAGGCTGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: FSMVSIVTGEINNPGQLPKSRTV*EPRLMV Trigger: CACCATCAGCCTGGGCTCCCATACTGTCCTCGATTT...AGGTAGCTGTCCAGGGTTATTTATTTCCCCAGTAACTATGGAAACCATGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR TCA 90 bp | GTCTTCTCCATGGTTTCCATAGTTACTGGGGAAATAAATAACCCTGGACAGCTATTGGCTTTGGGGCATTaGAAACCTGTCGAAGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: VFSMVSIVTGEINNPGQLLALGH*KPVEAN Trigger: ATTTGCTTCGACAGGTTTTCAATGCCCCAAAGCCAA...TAGCTGTCCAGGGTTATTTATTTCCCCAGTAACTATGGAAACCATGGAGAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR CCA 90 bp | TCTGTTTATTTGGAATGGTGTCTTCTCCATGGTTTCCATAGTTACTGGGGAAATGGTCCACTTTGGCTTTaGGGCATTGAAAACCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: SVYLEWCLLHGFHSYWGNGPLWL*GIENLS Trigger: CGACAGGTTTTCAATGCCCCAAAGCCAAAGTGGACC...ATTTCCCCAGTAACTATGGAAACCATGGAGAAGACACCATTCCAAATAAACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR CCA 90 bp | TCTGTTTATTTGGAATGGTGTCTTCTCCATGGTTTCCATAGTTACTGGGGAAATCAGCTGGGTCCACTTTaGCTTTGGGGCATTGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: SVYLEWCLLHGFHSYWGNQLGPL*LWGIEN Trigger: GTTTTCAATGCCCCAAAGCCAAAGTGGACCCAGCTG...ATTTCCCCAGTAACTATGGAAACCATGGAGAAGACACCATTCCAAATAAACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR CCA 90 bp | GTTTATTTGGAATGGTGTCTTCTCCATGGTTTCCATAGTTACTGGGGAAATAAAGATGGTGCTGACAGTTaGGTAGTACAGTGGTCCATC | + |
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Preference number: 4 (lower is better) Translates to: VYLEWCLLHGFHSYWGNKDGADS*VVQWSI Trigger: GATGGACCACTGTACTACCCAACTGTCAGCACCATC...TTTATTTCCCCAGTAACTATGGAAACCATGGAGAAGACACCATTCCAAATAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR CCA 90 bp | TTTATTTGGAATGGTGTCTTCTCCATGGTTTCCATAGTTACTGGGGAAATAAATTCCCCAGGCAGATACTaGTTCACAAGGACATGGTTA | + |
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Preference number: 4 (lower is better) Translates to: FIWNGVFSMVSIVTGEINSPGRY*FTRTWL Trigger: TAACCATGTCCTTGTGAACCAGTATCTGCCTGGGGA...ATTTATTTCCCCAGTAACTATGGAAACCATGGAGAAGACACCATTCCAAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR CCA 90 bp | GTTTATTTGGAATGGTGTCTTCTCCATGGTTTCCATAGTTACTGGGGAAATAAAAGTTGGGTAGTACAGTaGTCCATCTTCATGAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: VYLEWCLLHGFHSYWGNKSWVVQ*SIFMRH Trigger: ATGCCTCATGAAGATGGACCACTGTACTACCCAACT...TTTATTTCCCCAGTAACTATGGAAACCATGGAGAAGACACCATTCCAAATAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS CCA 90 bp | TGCTCAGCAGGAGGCTGGCGCGCAGCACACGGGGCACGCGGCGAATaGTCAGTGAGACACGGGTGCCGCGCACCAGGTGGGCTCCGGGCA | + |
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Preference number: 5 (lower is better) Translates to: CSAGGWRAAHGARGE*SVRHGCRAPGGLRA Trigger: TGCCCGGAGCCCACCTGGTGCGCGGCACCCGTGTCTCACTGACCATTCGCCGCGTGCCCCGTGTGCTGCGCGCCAGCCTCCTGCTGAGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR CAA 90 bp | GGCGTGTGTAAGCTGTGCCCCGGAGCACCAGCAGGCTCCGTGGTTCCACCAGCATTTGTCCACGTAGCGTaGAAGCCATGGAGGGAGTCG | + |
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Preference number: 5 (lower is better) Translates to: GVCKLCPGAPAGSVVPPAFVHVA*KPWRES Trigger: CGACTCCCTCCATGGCTTCAACGCTACGTGGACAAA...TGCTGGTGGAACCACGGAGCCTGCTGGTGCTCCGGGGCACAGCTTACACACGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| CDS CCA 90 bp | AAAAAGGCTGAGGTCAGACACTTTGTCCACGTAGCGTTGAAGCCATaGAGGGAGTCGCTCAGGGACCATCCCCCGAGGATGCGGGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: KKAEVRHFVHVALKP*RESLRDHPPRMREP Trigger: GGGCTCCCGCATCCTCGGGGGATGGTCCCTGAGCGACTCCCTCCATGGCTTCAACGCTACGTGGACAAAGTGTCTGACCTCAGCCTTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000060834.12 ENSMUST00000136887.8 ENSMUST00000137550.2 |
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| CDS-3UTR CAA 90 bp | CAGGCGTGTGTAAGCTGTGCCCCGGAGCACCAGCAGGCTCCGTGGTTCCACCAGTTTGGCTTTGGGGCATaGAAAACCTGTCGAAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: QACVSCAPEHQQAPWFHQFGFGA*KTCRSK Trigger: TTTGCTTCGACAGGTTTTCAATGCCCCAAAGCCAAA...CTGGTGGAACCACGGAGCCTGCTGGTGCTCCGGGGCACAGCTTACACACGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000137550.2 |
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| CDS CCA 90 bp | GAAATCGAGGACAGTATGGGAGCCCAGGCTGATGGTGCTGACAGTTaGGTAGTACAGTGGTCCATCTTCATGAGGCATGATGCCCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: EIEDSMGAQADGADS*VVQWSIFMRHDALP Trigger: GGGGAGGGCATCATGCCTCATGAAGATGGACCACTGTACTACCCAACTGTCAGCACCATCAGCCTGGGCTCCCATACTGTCCTCGATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060834.12 ENSMUST00000136887.8 |
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| CDS-3UTR CAA 90 bp | TCTGTTTATTTGGAATGGTGTCTTCTCCATGGTTTCCATAGTTACTGGGGAAATCCGGGCAGCGCTGACTaGCAAGCGGTGGCATTGGGT | + |
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Preference number: 5 (lower is better) Translates to: SVYLEWCLLHGFHSYWGNPGSAD*QAVALG Trigger: ACCCAATGCCACCGCTTGCAAGTCAGCGCTGCCCGG...ATTTCCCCAGTAACTATGGAAACCATGGAGAAGACACCATTCCAAATAAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR CAA 90 bp | TCTGTTTATTTGGAATGGTGTCTTCTCCATGGTTTCCATAGTTACTGGGGAAATTTTGTCCACGTAGCGTaGAAGCCATGGAGGGAGTCG | + |
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Preference number: 5 (lower is better) Translates to: SVYLEWCLLHGFHSYWGNFVHVA*KPWRES Trigger: CGACTCCCTCCATGGCTTCAACGCTACGTGGACAAA...ATTTCCCCAGTAACTATGGAAACCATGGAGAAGACACCATTCCAAATAAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR CAA 90 bp | TCCATGGTTTCCATAGTTACTGGGGAAATAAATAACCCTGGACAGCTACCTCTGTATTCCTCTTCTTCCTaGGAGATGAAGTCAGGGACA | + |
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Preference number: 5 (lower is better) Translates to: SMVSIVTGEINNPGQLPLYSSSS*EMKSGT Trigger: TGTCCCTGACTTCATCTCCAAGGAAGAAGAGGAATA...CAGAGGTAGCTGTCCAGGGTTATTTATTTCCCCAGTAACTATGGAAACCATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS-3UTR CAA 90 bp | TTCTCCATGGTTTCCATAGTTACTGGGGAAATAAATAACCCTGGACAGCTACCTTTTGGCTTTGGGGCATaGAAAACCTGTCGAAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: FSMVSIVTGEINNPGQLPFGFGA*KTCRSK Trigger: TTTGCTTCGACAGGTTTTCAATGCCCCAAAGCCAAA...AGGTAGCTGTCCAGGGTTATTTATTTCCCCAGTAACTATGGAAACCATGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS CCA 72 bp | GGAGGCTGGCGCGCAGCACACGGGGCACGCGGCGAATaGTCAGTGAGACACGGGTGCCGCGCACCAGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: GGWRAAHGARGE*SVRHGCRAPGG Trigger: CCCACCTGGTGCGCGGCACCCGTGTCTCACTGACCATTCGCCGCGTGCCCCGTGTGCTGCGCGCCAGCCTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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| CDS TCA 72 bp | ACCATCCCCCGAGGATGCGGGAGCCCACCCCAGTTCTaGAGCTTCCTCCCAGACAGCTGGGTCCACTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: TIPRGCGSPPQF*SFLPDSWVHFG Trigger: GCCAAAGTGGACCCAGCTGTCTGGGAGGAAGCTTCAGAACTGGGGTGGGCTCCCGCATCCTCGGGGGATGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060834.12 ENSMUST00000136887.8 ENSMUST00000137550.2 |
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| CDS CCA 72 bp | GAGGTCAGACACTTTGTCCACGTAGCGTTGAAGCCATaGAGGGAGTCGCTCAGGGACCATCCCCCGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: EVRHFVHVALKP*RESLRDHPPRM Trigger: CATCCTCGGGGGATGGTCCCTGAGCGACTCCCTCCATGGCTTCAACGCTACGTGGACAAAGTGTCTGACCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060834.12 ENSMUST00000136887.8 ENSMUST00000137550.2 |
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| CDS CCA 72 bp | GCCCAGGCTGATGGTGCTGACAGTTGGGTAGTACAGTaGTCCATCTTCATGAGGCATGATGCCCTCCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: AQADGADSWVVQ*SIFMRHDALPR Trigger: CCTGGGGAGGGCATCATGCCTCATGAAGATGGACCACTGTACTACCCAACTGTCAGCACCATCAGCCTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060834.12 ENSMUST00000136887.8 |
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| CDS CAA 72 bp | AAAAAGGCTGAGGTCAGACACTTTGTCCACGTAGCGTaGAAGCCATGGAGGGAGTCGCTCAGGGACCATCCC | + |
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Preference number: 6 (lower is better) Translates to: KKAEVRHFVHVA*KPWRESLRDHP Trigger: GGGATGGTCCCTGAGCGACTCCCTCCATGGCTTCAACGCTACGTGGACAAAGTGTCTGACCTCAGCCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060834.12 ENSMUST00000136887.8 ENSMUST00000137550.2 |
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| CDS TCA 72 bp | CCTGTCGAAGCAAATATTCCTCTTCTTCCTTGGAGATaGAGTCAGGGACATAGTAGATTAGAGGTGGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: PVEANIPLLPWR*SQGHSRLEVAP Trigger: AGGCGCCACCTCTAATCTACTATGTCCCTGACTTCATCTCCAAGGAAGAAGAGGAATATTTGCTTCGACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060834.12 |
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