Pregenerated sensors for ALKBH5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042650Ensembl transcript IDs: ENSMUST00000044250.4
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCGAGAGCCAGACCTTTGTGTACTTAGAGTGGTGGTGGCATGGCTaGTTAGAAGGCCTCTGTTTTCAGCAGGCTCAGTCCTGGCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: PESQTFVYLEWWWHG*LEGLCFQQAQSWPG Trigger: GCCAGGCCAGGACTGAGCCTGCTGAAAACAGAGGCCTTCTAAGCAGCCATGCCACCACCACTCTAAGTACACAAAGGTCTGGCTCTCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR CCA 90 bp | GAGGCCCGAGAGCCAGACCTTTGTGTACTTAGAGTGGTGGTGGCATaGCTGCTTAGAAGGCCTCTGTTTTCAGCAGGCTCAGTCCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: EAREPDLCVLRVVVA*LLRRPLFSAGSVLA Trigger: GGCCAGGACTGAGCCTGCTGAAAACAGAGGCCTTCTAAGCAGCCATGCCACCACCACTCTAAGTACACAAAGGTCTGGCTCTCGGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR CCA 90 bp | CAGCCACTGAGGCCCGAGAGCCAGACCTTTGTGTACTTAGAGTGGTaGTGGCATGGCTGCTTAGAAGGCCTCTGTTTTCAGCAGGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: QPLRPESQTFVYLEW*WHGCLEGLCFQQAQ Trigger: CTGAGCCTGCTGAAAACAGAGGCCTTCTAAGCAGCCATGCCACCACCACTCTAAGTACACAAAGGTCTGGCTCTCGGGCCTCAGTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR CCA 90 bp | AATTGGCTCAGATCACTGGAGCAGAGCTGGAGAGCTGCTGACAGTTaGCAATACCCTGGGATCCACATTAGGGACCCCAGTGGACTGGAG | + |
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Preference number: 1 (lower is better) Translates to: NWLRSLEQSWRAADS*QYPGIHIRDPSGLE Trigger: CTCCAGTCCACTGGGGTCCCTAATGTGGATCCCAGGGTATTGCCAACTGTCAGCAGCTCTCCAGCTCTGCTCCAGTGATCTGAGCCAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR TCA 90 bp | GGGGAACAGGGTATTTGCATGAGATTCCAGAGCCTGGACAGCAGGTaGGATGTATGGGCACAGCAGACCCAATGCAGGACCTGTATGGCT | + |
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Preference number: 1 (lower is better) Translates to: GEQGICMRFQSLDSR*DVWAQQTQCRTCMA Trigger: AGCCATACAGGTCCTGCATTGGGTCTGCTGTGCCCATACATCTCACCTGCTGTCCAGGCTCTGGAATCTCATGCAAATACCCTGTTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR TCA 90 bp | GCTTCTCTACCAAGCCAGGGAGAGACTGTATCTTCTAGAATTCCATaGGGTGTATCCCTGGCCACCCTCCTTGAAGGGGAGAGGGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: ASLPSQGETVSSRIP*GVSLATLLEGERAV Trigger: CACTGCCCTCTCCCCTTCAAGGAGGGTGGCCAGGGATACACCTCATGGAATTCTAGAAGATACAGTCTCTCCCTGGCTTGGTAGAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR TCA 90 bp | TATCTACCAATGTTCTACACCCAGGGAGGCCAAGAGCCTAGCTGCTaGGTACAAGAATGGCCACGTCCTCTACCTGAGCTCCTCTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: YLPMFYTQGGQEPSC*VQEWPRPLPELLCP Trigger: GGGACAGAGGAGCTCAGGTAGAGGACGTGGCCATTCTTGTACTCAGCAGCTAGGCTCTTGGCCTCCCTGGGTGTAGAACATTGGTAGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR CCA 90 bp | GCCAGGGAGAGACTGTATCTTCTAGAATTCCATGAGGTGTATCCCTaGCCACCCTCCTTGAAGGGGAGAGGGCAGTGGGCAAACACAAGT | + |
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Preference number: 1 (lower is better) Translates to: ARERLYLLEFHEVYP*PPSLKGRGQWANTS Trigger: ACTTGTGTTTGCCCACTGCCCTCTCCCCTTCAAGGAGGGTGGCCAGGGATACACCTCATGGAATTCTAGAAGATACAGTCTCTCCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR CCA 90 bp | GGGGGATGGCACTGTTTAAGCCCCATACGCAGCAAACTTGAACAGTaGGGAACAGGGTATTTGCATGAGATTCCAGAGCCTGGACAGCAG | + |
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Preference number: 1 (lower is better) Translates to: GGWHCLSPIRSKLEQ*GTGYLHEIPEPGQQ Trigger: CTGCTGTCCAGGCTCTGGAATCTCATGCAAATACCCTGTTCCCCACTGTTCAAGTTTGCTGCGTATGGGGCTTAAACAGTGCCATCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR CCA 90 bp | TGGCTGCTTAGAAGGCCTCTGTTTTCAGCAGGCTCAGTCCTGGCCTaGCTGCCAAAGTCAATCCTAATGAACCCCACCTTCCAGGATCTA | + |
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Preference number: 1 (lower is better) Translates to: WLLRRPLFSAGSVLA*LPKSILMNPTFQDL Trigger: TAGATCCTGGAAGGTGGGGTTCATTAGGATTGACTTTGGCAGCCAGGCCAGGACTGAGCCTGCTGAAAACAGAGGCCTTCTAAGCAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR CCA 90 bp | GGATTGGGATCTGCCCTTCTGCAACATCACAGCTGGGATGACATTTaGTGCTTCCTCTCAGTTCTAGTGTCATCCCAGTCCACTGCACAG | + |
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Preference number: 1 (lower is better) Translates to: GLGSALLQHHSWDDI*CFLSVLVSSQSTAQ Trigger: CTGTGCAGTGGACTGGGATGACACTAGAACTGAGAGGAAGCACCAAATGTCATCCCAGCTGTGATGTTGCAGAAGGGCAGATCCCAATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR CCA 90 bp | CCACCCAAGCATGGATTGGGATCTGCCCTTCTGCAACATCACAGCTaGGATGACATTTGGTGCTTCCTCTCAGTTCTAGTGTCATCCCAG | + |
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Preference number: 1 (lower is better) Translates to: PPKHGLGSALLQHHS*DDIWCFLSVLVSSQ Trigger: CTGGGATGACACTAGAACTGAGAGGAAGCACCAAATGTCATCCCAGCTGTGATGTTGCAGAAGGGCAGATCCCAATCCATGCTTGGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR TCA 90 bp | CTGCTGGCATTACAGACAAGCACCATGCCTGGCTGCTTTGCTTTTTaGGACAAGGCCCAGGCAGGCCTTAAACTTTTGATCCTTCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: LLALQTSTMPGCFAF*DKAQAGLKLLILLP Trigger: AGGCAGAAGGATCAAAAGTTTAAGGCCTGCCTGGGCCTTGTCTCAAAAAGCAAAGCAGCCAGGCATGGTGCTTGTCTGTAATGCCAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR GCA 90 bp | TTGGGATCTGCCCTTCTGCAACATCACAGCTGGGATGACATTTGGTaGTTCCTCTCAGTTCTAGTGTCATCCCAGTCCACTGCACAGTTC | + |
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Preference number: 1 (lower is better) Translates to: LGSALLQHHSWDDIW*FLSVLVSSQSTAQF Trigger: GAACTGTGCAGTGGACTGGGATGACACTAGAACTGAGAGGAAGCACCAAATGTCATCCCAGCTGTGATGTTGCAGAAGGGCAGATCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR TCA 90 bp | AAACCACAGAAGATCTGTGACTGCTTTAGTTATGCAGTCTCAACTTaGGGGCTCCACACTGGCAAAGGATCTGACCCCAAAGAGACTTCC | + |
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Preference number: 1 (lower is better) Translates to: KPQKICDCFSYAVST*GLHTGKGSDPKETS Trigger: GGAAGTCTCTTTGGGGTCAGATCCTTTGCCAGTGTGGAGCCCTCAAGTTGAGACTGCATAACTAAAGCAGTCACAGATCTTCTGTGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR CCA 90 bp | CCAGTCATTCTATGGGCAATGAAATGGCTTGACCAAGATTCACAGTaGCAATTTGAGCAAATTGGCTCAGATCACTGGAGCAGAGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: PVILWAMKWLDQDSQ*QFEQIGSDHWSRAG Trigger: TCCAGCTCTGCTCCAGTGATCTGAGCCAATTTGCTCAAATTGCCACTGTGAATCTTGGTCAAGCCATTTCATTGCCCATAGAATGACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR TCA 90 bp | GAAAAGGCTGGATGCAGTGGCAAGATTGCTATTTCAAGGATGGCCTaGGCTAGAGTGAGACCCTTTCTATCCTTTCTATACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: EKAGCSGKIAISRMA*ARVRPFLSFLYTHT Trigger: TGTGTGTGTGTATAGAAAGGATAGAAAGGGTCTCACTCTAGCTCAGGCCATCCTTGAAATAGCAATCTTGCCACTGCATCCAGCCTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR TCA 90 bp | ATATATGCTATATGTGGACAGAGCAGGCACATCTTCTTAGGGAGATaGTATGGGAAAAGAGGCCCAAGATGGTCAAATGAGGAGAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: IYAICGQSRHIFLGR*YGKRGPRWSNEEKE Trigger: CTCTTTCTCCTCATTTGACCATCTTGGGCCTCTTTTCCCATATCATCTCCCTAAGAAGATGTGCCTGCTCTGTCCACATATAGCATATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR CCA 90 bp | TTCAATAAACTTCCACTTGAAGACAGCTGTCCCCATTGTCTCTACTaGCTACTCTGGTGTGAACAATTCTCTACAGAAGCCAACAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: FNKLPLEDSCPHCLY*LLWCEQFSTEANSF Trigger: AAAGCTGTTGGCTTCTGTAGAGAATTGTTCACACCAGAGTAGCCAGTAGAGACAATGGGGACAGCTGTCTTCAAGTGGAAGTTTATTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR TCA 90 bp | ATTGGAAGCCAATCAGTTCCTCTAGCTAGAAACAATTCCTACAAATaGCCCACTGCAGCAAGTCTAACAGTTCCATACAATCACACACAT | + |
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Preference number: 1 (lower is better) Translates to: IGSQSVPLARNNSYK*PTAASLTVPYNHTH Trigger: ATGTGTGTGATTGTATGGAACTGTTAGACTTGCTGCAGTGGGTCATTTGTAGGAATTGTTTCTAGCTAGAGGAACTGATTGGCTTCCAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR GCA 90 bp | AGCACACTGTACATGTTATTTACACTTACAGTTAATGGGCTCTACTaGCTTCCTATACATTATAGAACACCTTTACATGCATGTAAGCAT | + |
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Preference number: 1 (lower is better) Translates to: STLYMLFTLTVNGLY*LPIHYRTPLHACKH Trigger: ATGCTTACATGCATGTAAAGGTGTTCTATAATGTATAGGAAGGCAGTAGAGCCCATTAACTGTAAGTGTAAATAACATGTACAGTGTGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR CCA 90 bp | AGGATTGGTGGGCAGAGCAAGCCAGAGGGCATGCAGAAAACCTGGGGACTCAGAAATGCAGGACCTGTATaGCTCCAAGAGACCTCATCC | + |
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Preference number: 2 (lower is better) Translates to: RIGGQSKPEGMQKTWGLRNAGPV*LQETSS Trigger: GGATGAGGTCTCTTGGAGCCATACAGGTCCTGCATT...TCTGAGTCCCCAGGTTTTCTGCATGCCCTCTGGCTTGCTCTGCCCACCAATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR CAA 90 bp | CTGTATCTTCTAGAATTCCATGAGGTGTATCCCTGGCCACCCTCCTaGAAGGGGAGAGGGCAGTGGGCAAACACAAGTCCACCTTTAGCC | + |
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Preference number: 2 (lower is better) Translates to: LYLLEFHEVYPWPPS*KGRGQWANTSPPLA Trigger: GGCTAAAGGTGGACTTGTGTTTGCCCACTGCCCTCTCCCCTTCAAGGAGGGTGGCCAGGGATACACCTCATGGAATTCTAGAAGATACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR TCA 90 bp | GCACCATGCCTGGCTGCTTTGCTTTTTGAGACAAGGCCCAGGCAGGCCTTAAACACATCACAGCTGGGATaGCATTTGGTGCTTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: APCLAALLFETRPRQALNTSQLG*HLVLPL Trigger: GAGAGGAAGCACCAAATGTCATCCCAGCTGTGATGT...GTTTAAGGCCTGCCTGGGCCTTGTCTCAAAAAGCAAAGCAGCCAGGCATGGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR TCA 90 bp | GCACCATGCCTGGCTGCTTTGCTTTTTGAGACAAGGCCCAGGCAGGCCTTAAACAACAGGGTATTTGCATaGGATTCCAGAGCCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: APCLAALLFETRPRQALNNRVFA*DSRAWT Trigger: TGTCCAGGCTCTGGAATCTCATGCAAATACCCTGTT...GTTTAAGGCCTGCCTGGGCCTTGTCTCAAAAAGCAAAGCAGCCAGGCATGGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR TCA 90 bp | GCACCATGCCTGGCTGCTTTGCTTTTTGAGACAAGGCCCAGGCAGGCCTTAAACTCAGAACAAAAGAAATaGAGCCCTACCACACACCCC | + |
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Preference number: 2 (lower is better) Translates to: APCLAALLFETRPRQALNSEQKK*SPTTHP Trigger: GGGGTGTGTGGTAGGGCTTCATTTCTTTTGTTCTGA...GTTTAAGGCCTGCCTGGGCCTTGTCTCAAAAAGCAAAGCAGCCAGGCATGGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR CCA 90 bp | GCACCATGCCTGGCTGCTTTGCTTTTTGAGACAAGGCCCAGGCAGGCCTTAAACTTACTTCATAAGGACTaGGGGCACTATCCCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: APCLAALLFETRPRQALNLLHKD*GHYPRT Trigger: TGTCCTGGGATAGTGCCCCCAGTCCTTATGAAGTAA...GTTTAAGGCCTGCCTGGGCCTTGTCTCAAAAAGCAAAGCAGCCAGGCATGGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR CAA 90 bp | TTAAGCCCCATACGCAGCAAACTTGAACAGTGGGGAACAGGGTATTaGCATGAGATTCCAGAGCCTGGACAGCAGGTGAGATGTATGGGC | + |
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Preference number: 2 (lower is better) Translates to: LSPIRSKLEQWGTGY*HEIPEPGQQVRCMG Trigger: GCCCATACATCTCACCTGCTGTCCAGGCTCTGGAATCTCATGCAAATACCCTGTTCCCCACTGTTCAAGTTTGCTGCGTATGGGGCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR CCA 90 bp | GCACCATGCCTGGCTGCTTTGCTTTTTGAGACAAGGCCCAGGCAGGCCTTAAACTTTGTGTACTTAGAGTaGTGGTGGCATGGCTGCTTA | + |
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Preference number: 2 (lower is better) Translates to: APCLAALLFETRPRQALNFVYLE*WWHGCL Trigger: TAAGCAGCCATGCCACCACCACTCTAAGTACACAAA...GTTTAAGGCCTGCCTGGGCCTTGTCTCAAAAAGCAAAGCAGCCAGGCATGGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGACAAATGCCCAACTAAGACAGACAGAAAAGGCTGGATGCAGTGGCAAGAGACTTCCTGATGACTaGGTGCTCCCACACCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: PKTNAQLRQTEKAGCSGKRLPDD*VLPHLC Trigger: GCAGAGGTGTGGGAGCACCCAGTCATCAGGAAGTCT...CTTGCCACTGCATCCAGCCTTTTCTGTCTGTCTTAGTTGGGCATTTGTCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGACAAATGCCCAACTAAGACAGACAGAAAAGGCTGGATGCAGTGGCAAGTCACTGGAGCAGAGCTaGAGAGCTGCTGACAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: PKTNAQLRQTEKAGCSGKSLEQS*RAADSW Trigger: CCAACTGTCAGCAGCTCTCCAGCTCTGCTCCAGTGA...CTTGCCACTGCATCCAGCCTTTTCTGTCTGTCTTAGTTGGGCATTTGTCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR GCA 90 bp | CCAAAGACAAATGCCCAACTAAGACAGACAGAAAAGGCTGGATGCAGTGGCAAGACACACACGGTGGGGTaGAGAGAGGCACTGAAATGT | + |
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Preference number: 2 (lower is better) Translates to: PKTNAQLRQTEKAGCSGKTHTVG*REALKC Trigger: ACATTTCAGTGCCTCTCTGCACCCCACCGTGTGTGT...CTTGCCACTGCATCCAGCCTTTTCTGTCTGTCTTAGTTGGGCATTTGTCTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGACAAATGCCCAACTAAGACAGACAGAAAAGGCTGGATGCAGTGGCAAGGGCATGCAGAAAACCTaGGGACTCAGAAATGGGATG | + |
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Preference number: 2 (lower is better) Translates to: PKTNAQLRQTEKAGCSGKGMQKT*GLRNGM Trigger: CATCCCATTTCTGAGTCCCCAGGTTTTCTGCATGCC...CTTGCCACTGCATCCAGCCTTTTCTGTCTGTCTTAGTTGGGCATTTGTCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR CCA 90 bp | GCACCATGCCTGGCTGCTTTGCTTTTTGAGACAAGGCCCAGGCAGGCCTTAAACACAAGGTTAAAGGAATaGAATGAGATCTTAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: APCLAALLFETRPRQALNTRLKE*NEILGG Trigger: CCCACCTAAGATCTCATTCCATTCCTTTAACCTTGT...GTTTAAGGCCTGCCTGGGCCTTGTCTCAAAAAGCAAAGCAGCCAGGCATGGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR GCA 90 bp | GCACCATGCCTGGCTGCTTTGCTTTTTGAGACAAGGCCCAGGCAGGCCTTAAACTCATCCTATCCTACCTaGTTTATCTACCAATGTTCT | + |
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Preference number: 2 (lower is better) Translates to: APCLAALLFETRPRQALNSSYPT*FIYQCS Trigger: AGAACATTGGTAGATAAAGCAGGTAGGATAGGATGA...GTTTAAGGCCTGCCTGGGCCTTGTCTCAAAAAGCAAAGCAGCCAGGCATGGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR TCA 90 bp | GCAAGAGGCAGGAATAGGCTTCCTACCAAAGTCTTAAGGAGAGCACAAAACAGTGCCCGGCCCCAAGACTaGGAAAGTATTAATCCAATA | + |
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Preference number: 2 (lower is better) Translates to: ARGRNRLPTKVLRRAQNSARPQD*ESINPI Trigger: TATTGGATTAATACTTTCTCAGTCTTGGGGCCGGGC...ACTGTTTTGTGCTCTCCTTAAGACTTTGGTAGGAAGCCTATTCCTGCCTCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR GCA 90 bp | GTTAATGGGCTCTACTGCCTTCCTATACATTATAGAACACCTTTACATGCATGTGCAAGCCAGAGGGCATaGAGAAAACCTGGGGACTCA | + |
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Preference number: 2 (lower is better) Translates to: VNGLYCLPIHYRTPLHACASQRA*RKPGDS Trigger: TGAGTCCCCAGGTTTTCTGCATGCCCTCTGGCTTGC...ACATGCATGTAAAGGTGTTCTATAATGTATAGGAAGGCAGTAGAGCCCATTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR GCA 90 bp | GCAAGAGGCAGGAATAGGCTTCCTACCAAAGTCTTAAGGAGAGCACAAAACAGTCTGGCCTTGGATATATaGTATATGTGGACAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: ARGRNRLPTKVLRRAQNSLALDI*YMWTEQ Trigger: CTGCTCTGTCCACATATAGCATATATCCAAGGCCAG...ACTGTTTTGTGCTCTCCTTAAGACTTTGGTAGGAAGCCTATTCCTGCCTCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR TCA 90 bp | GTTAATGGGCTCTACTGCCTTCCTATACATTATAGAACACCTTTACATGCATGTCAAGAGCCTAGCTGCTaGGTACAAGAATGGCCACGT | + |
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Preference number: 2 (lower is better) Translates to: VNGLYCLPIHYRTPLHACQEPSC*VQEWPR Trigger: ACGTGGCCATTCTTGTACTCAGCAGCTAGGCTCTTG...ACATGCATGTAAAGGTGTTCTATAATGTATAGGAAGGCAGTAGAGCCCATTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR GCA 90 bp | GTTAATGGGCTCTACTGCCTTCCTATACATTATAGAACACCTTTACATGCATGTGTCATCCCAGTCCACTaGACAGTTCATACAGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: VNGLYCLPIHYRTPLHACVIPVH*TVHTEA Trigger: GGCCTCTGTATGAACTGTGCAGTGGACTGGGATGAC...ACATGCATGTAAAGGTGTTCTATAATGTATAGGAAGGCAGTAGAGCCCATTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR CCA 90 bp | GATATGGGAAAAGAGGCCCAAGATGGTCAAATGAGGAGAAAGAGACTAAAGGGAAAGCATGAGCATCAGTaGAAGAAAAGGCTGGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: DMGKEAQDGQMRRKRLKGKHEHQ*KKRLAK Trigger: TTTTGCCAGCCTTTTCTTCCACTGATGCTCATGCTT...TCCCTTTAGTCTCTTTCTCCTCATTTGACCATCTTGGGCCTCTTTTCCCATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR CCA 90 bp | GTTAATGGGCTCTACTGCCTTCCTATACATTATAGAACACCTTTACATGCATGTAGCTGGGATGACATTTaGTGCTTCCTCTCAGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: VNGLYCLPIHYRTPLHACSWDDI*CFLSVL Trigger: TAGAACTGAGAGGAAGCACCAAATGTCATCCCAGCT...ACATGCATGTAAAGGTGTTCTATAATGTATAGGAAGGCAGTAGAGCCCATTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR TCA 90 bp | TACTGCCTTCCTATACATTATAGAACACCTTTACATGCATGTAAGCATGTCATAGGCAATGAAATGGCTTaGCCAAGATTCACAGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: YCLPIHYRTPLHACKHVIGNEMA*PRFTVA Trigger: TGCCACTGTGAATCTTGGTCAAGCCATTTCATTGCC...TATGACATGCTTACATGCATGTAAAGGTGTTCTATAATGTATAGGAAGGCAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR GCA 90 bp | GTTAATGGGCTCTACTGCCTTCCTATACATTATAGAACACCTTTACATGCATGTCAGAAGATCTGTGACTaGTTTAGTTATGCAGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: VNGLYCLPIHYRTPLHACQKICD*FSYAVS Trigger: TGAGACTGCATAACTAAAGCAGTCACAGATCTTCTG...ACATGCATGTAAAGGTGTTCTATAATGTATAGGAAGGCAGTAGAGCCCATTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR-3UTR CCA 90 bp | TACTGCCTTCCTATACATTATAGAACACCTTTACATGCATGTAAGCATGTCATATGCAGGTCTGACTTCTaGCCTTGGATATATGCTATA | + |
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Preference number: 2 (lower is better) Translates to: YCLPIHYRTPLHACKHVICRSDF*PWIYAI Trigger: TATAGCATATATCCAAGGCCAGAAGTCAGACCTGCA...TATGACATGCTTACATGCATGTAAAGGTGTTCTATAATGTATAGGAAGGCAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR GCA 72 bp | GAATGGCCACGTCCTCTACCTGAGCTCCTCTGTCCCTaGTCCAGCTCCACCTGTGTTTGTACTGGCCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: EWPRPLPELLCP*SSSTCVCTGLQ Trigger: CTGCAGGCCAGTACAAACACAGGTGGAGCTGGAGCAGGGACAGAGGAGCTCAGGTAGAGGACGTGGCCATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| 3UTR GCA 72 bp | CATCCAGGATTGGTGGGCAGAGCAAGCCAGAGGGCATaGAGAAAACCTGGGGACTCAGAAATGGGATGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: HPGLVGRASQRA*RKPGDSEMGWR Trigger: CCGCCATCCCATTTCTGAGTCCCCAGGTTTTCTGCATGCCCTCTGGCTTGCTCTGCCCACCAATCCTGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR CCA 72 bp | AATACCCTGGGATCCACATTAGGGACCCCAGTGGACTaGAGGAGCCCACTGAGTCCCAATCTCATCCTATCC | + |
|
Preference number: 3 (lower is better) Translates to: NTLGSTLGTPVD*RSPLSPNLILS Trigger: GGATAGGATGAGATTGGGACTCAGTGGGCTCCTCCAGTCCACTGGGGTCCCTAATGTGGATCCCAGGGTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR-3UTR CAA 90 bp | GCACCATGCCTGGCTGCTTTGCTTTTTGAGACAAGGCCCAGGCAGGCCTTAAACCCATACGCAGCAAACTaGAACAGTGGGGAACAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: APCLAALLFETRPRQALNPYAAN*NSGEQG Trigger: ACCCTGTTCCCCACTGTTCAAGTTTGCTGCGTATGG...GTTTAAGGCCTGCCTGGGCCTTGTCTCAAAAAGCAAAGCAGCCAGGCATGGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR TCA 72 bp | CCAAGCCAGGGAGAGACTGTATCTTCTAGAATTCCATaGGGTGTATCCCTGGCCACCCTCCTTGAAGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PSQGETVSSRIP*GVSLATLLEGE Trigger: CTCCCCTTCAAGGAGGGTGGCCAGGGATACACCTCATGGAATTCTAGAAGATACAGTCTCTCCCTGGCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR CCA 72 bp | AGAAGGCCTCTGTTTTCAGCAGGCTCAGTCCTGGCCTaGCTGCCAAAGTCAATCCTAATGAACCCCACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RRPLFSAGSVLA*LPKSILMNPTF Trigger: GAAGGTGGGGTTCATTAGGATTGACTTTGGCAGCCAGGCCAGGACTGAGCCTGCTGAAAACAGAGGCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR CCA 72 bp | AGACTGTATCTTCTAGAATTCCATGAGGTGTATCCCTaGCCACCCTCCTTGAAGGGGAGAGGGCAGTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RLYLLEFHEVYP*PPSLKGRGQWA Trigger: TGCCCACTGCCCTCTCCCCTTCAAGGAGGGTGGCCAGGGATACACCTCATGGAATTCTAGAAGATACAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR CCA 72 bp | TTCCATCCCTTGTCCCTAGGAAGAGCCACCCAAGCATaGATTGGGATCTGCCCTTCTGCAACATCACAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FHPLSLGRATQA*IGICPSATSQL Trigger: CAGCTGTGATGTTGCAGAAGGGCAGATCCCAATCCATGCTTGGGTGGCTCTTCCTAGGGACAAGGGATGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR GCA 72 bp | CAGACCTTTGTGTACTTAGAGTGGTGGTGGCATGGCTaGTTAGAAGGCCTCTGTTTTCAGCAGGCTCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QTFVYLEWWWHG*LEGLCFQQAQS Trigger: GGACTGAGCCTGCTGAAAACAGAGGCCTTCTAAGCAGCCATGCCACCACCACTCTAAGTACACAAAGGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR GCA 72 bp | GTGCTTCCTCTCAGTTCTAGTGTCATCCCAGTCCACTaGACAGTTCATACAGAGGCCCTGACCCTTCTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VLPLSSSVIPVH*TVHTEALTLLD Trigger: GTCTAGAAGGGTCAGGGCCTCTGTATGAACTGTGCAGTGGACTGGGATGACACTAGAACTGAGAGGAAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR GCA 72 bp | AAGAGCCACCCAAGCATGGATTGGGATCTGCCCTTCTaGAACATCACAGCTGGGATGACATTTGGTGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: KSHPSMDWDLPF*NITAGMTFGAS Trigger: GGAAGCACCAAATGTCATCCCAGCTGTGATGTTGCAGAAGGGCAGATCCCAATCCATGCTTGGGTGGCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR CCA 72 bp | ATGTATGGGCACAGCAGACCCAATGCAGGACCTGTATaGCTCCAAGAGACCTCATCCAAGCATGAGCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: MYGHSRPNAGPV*LQETSSKHEHQ Trigger: CTGATGCTCATGCTTGGATGAGGTCTCTTGGAGCCATACAGGTCCTGCATTGGGTCTGCTGTGCCCATACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR CCA 72 bp | AACCATTGTGCTAGTTCCTTGACCATCCAGGATTGGTaGGCAGAGCAAGCCAGAGGGCATGCAGAAAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: NHCASSLTIQDW*AEQARGHAENL Trigger: CAGGTTTTCTGCATGCCCTCTGGCTTGCTCTGCCCACCAATCCTGGATGGTCAAGGAACTAGCACAATGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR CCA 72 bp | GAGCCAGACCTTTGTGTACTTAGAGTGGTGGTGGCATaGCTGCTTAGAAGGCCTCTGTTTTCAGCAGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: EPDLCVLRVVVA*LLRRPLFSAGS Trigger: TGAGCCTGCTGAAAACAGAGGCCTTCTAAGCAGCCATGCCACCACCACTCTAAGTACACAAAGGTCTGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR CCA 72 bp | AGTCAGGGGCCAAACAAAGCTCTAGGCCCAGTGCCATaGCTAGAACAAGAAAGATTCAGAGTCAGGTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SQGPNKALGPVP*LEQERFRVRCG Trigger: CCCACACCTGACTCTGAATCTTTCTTGTTCTAGCCATGGCACTGGGCCTAGAGCTTTGTTTGGCCCCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR GCA 72 bp | GCCCTTCTGCAACATCACAGCTGGGATGACATTTGGTaGTTCCTCTCAGTTCTAGTGTCATCCCAGTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: ALLQHHSWDDIW*FLSVLVSSQST Trigger: AGTGGACTGGGATGACACTAGAACTGAGAGGAAGCACCAAATGTCATCCCAGCTGTGATGTTGCAGAAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR TCA 72 bp | TTAGCAAAAGAGGTCAGAACCATTGTGCTAGTTCCTTaGCCATCCAGGATTGGTGGGCAGAGCAAGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LAKEVRTIVLVP*PSRIGGQSKPE Trigger: CTCTGGCTTGCTCTGCCCACCAATCCTGGATGGTCAAGGAACTAGCACAATGGTTCTGACCTCTTTTGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR GCA 72 bp | CACACACACACACACACACACACACACACGGTGGGGTaGAGAGAGGCACTGAAATGTAGCATACAAAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHTHTHTVG*REALKCSIQKE Trigger: CTCTTTTTGTATGCTACATTTCAGTGCCTCTCTGCACCCCACCGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR CCA 72 bp | TCACAGTGGCAATTTGAGCAAATTGGCTCAGATCACTaGAGCAGAGCTGGAGAGCTGCTGACAGTTGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: SQWQFEQIGSDH*SRAGELLTVGN Trigger: ATTGCCAACTGTCAGCAGCTCTCCAGCTCTGCTCCAGTGATCTGAGCCAATTTGCTCAAATTGCCACTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR TCA 72 bp | TTACAGACAAGCACCATGCCTGGCTGCTTTGCTTTTTaGGACAAGGCCCAGGCAGGCCTTAAACTTTTGATC | + |
|
Preference number: 3 (lower is better) Translates to: LQTSTMPGCFAF*DKAQAGLKLLI Trigger: GATCAAAAGTTTAAGGCCTGCCTGGGCCTTGTCTCAAAAAGCAAAGCAGCCAGGCATGGTGCTTGTCTGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR CCA 72 bp | CTTCCACTTGAAGACAGCTGTCCCCATTGTCTCTACTaGCTACTCTGGTGTGAACAATTCTCTACAGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LPLEDSCPHCLY*LLWCEQFSTEA Trigger: GGCTTCTGTAGAGAATTGTTCACACCAGAGTAGCCAGTAGAGACAATGGGGACAGCTGTCTTCAAGTGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR CCA 72 bp | CACTGTTTAAGCCCCATACGCAGCAAACTTGAACAGTaGGGAACAGGGTATTTGCATGAGATTCCAGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: HCLSPIRSKLEQ*GTGYLHEIPEP Trigger: AGGCTCTGGAATCTCATGCAAATACCCTGTTCCCCACTGTTCAAGTTTGCTGCGTATGGGGCTTAAACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR TCA 72 bp | AGGACCTGTATGGCTCCAAGAGACCTCATCCAAGCATaGGCATCAGTGGAAGAAAAGGCTGGCAAAAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: RTCMAPRDLIQA*ASVEEKAGKRI Trigger: TATTCTTTTGCCAGCCTTTTCTTCCACTGATGCTCATGCTTGGATGAGGTCTCTTGGAGCCATACAGGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR TCA 72 bp | CTTCATAAGGACTGGGGGCACTATCCCAGGACAGACTaGAGCCTAGATCACTGGTATCAAAATCTCTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LHKDWGHYPRTD*SLDHWYQNLFH Trigger: ATGGAAGAGATTTTGATACCAGTGATCTAGGCTTCAGTCTGTCCTGGGATAGTGCCCCCAGTCCTTATGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR CCA 72 bp | GAAGACAGCTGTCCCCATTGTCTCTACTGGCTACTCTaGTGTGAACAATTCTCTACAGAAGCCAACAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: EDSCPHCLYWLL*CEQFSTEANSF Trigger: AAAGCTGTTGGCTTCTGTAGAGAATTGTTCACACCAGAGTAGCCAGTAGAGACAATGGGGACAGCTGTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR GCA 72 bp | GTGGAGTATATGGGAGTCCCTATATCCAAAGACAAATaGCCAACTAAGACAGACAGAAAAGGCTGGATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VEYMGVPISKDK*PTKTDRKGWMQ Trigger: CTGCATCCAGCCTTTTCTGTCTGTCTTAGTTGGGCATTTGTCTTTGGATATAGGGACTCCCATATACTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR TCA 72 bp | GAACACTCTTCACACAACAAGGTTAAAGGAATGGAATaGGATCTTAGGTGGGTAGGGCTGGTACATCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: EHSSHNKVKGME*DLRWVGLVHPV Trigger: AACTGGATGTACCAGCCCTACCCACCTAAGATCTCATTCCATTCCTTTAACCTTGTTGTGTGAAGAGTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR TCA 72 bp | GAGGAATCAATAGGCCACAGATTTAGTAACAATTTCTaGAGAAAGAGCAGCATCGTAAGCTGCATGTCGGCC | + |
|
Preference number: 3 (lower is better) Translates to: EESIGHRFSNNF*RKSSIVSCMSA Trigger: GGCCGACATGCAGCTTACGATGCTGCTCTTTCTTCAGAAATTGTTACTAAATCTGTGGCCTATTGATTCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR-3UTR CAA 90 bp | GATGATATGGGAAAAGAGGCCCAAGATGGTCAAATGAGGAGAAAGAGACTAAAGTCAATAAACTTCCACTaGAAGACAGCTGTCCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: DDMGKEAQDGQMRRKRLKSINFH*KTAVPI Trigger: AATGGGGACAGCTGTCTTCAAGTGGAAGTTTATTGA...CTTTAGTCTCTTTCTCCTCATTTGACCATCTTGGGCCTCTTTTCCCATATCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR TCA 72 bp | CAATCAGTTCCTCTAGCTAGAAACAATTCCTACAAATaGCCCACTGCAGCAAGTCTAACAGTTCCATACAAT | + |
|
Preference number: 3 (lower is better) Translates to: QSVPLARNNSYK*PTAASLTVPYN Trigger: ATTGTATGGAACTGTTAGACTTGCTGCAGTGGGTCATTTGTAGGAATTGTTTCTAGCTAGAGGAACTGATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR GCA 72 bp | TACATGTTATTTACACTTACAGTTAATGGGCTCTACTaGCTTCCTATACATTATAGAACACCTTTACATGCA | + |
|
Preference number: 3 (lower is better) Translates to: YMLFTLTVNGLY*LPIHYRTPLHA Trigger: TGCATGTAAAGGTGTTCTATAATGTATAGGAAGGCAGTAGAGCCCATTAACTGTAAGTGTAAATAACATGTA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR TCA 90 bp | AGGATTGGTGGGCAGAGCAAGCCAGAGGGCATGCAGAAAACCTGGGGACTCAGAGGGACGTCATGGACTTaGGCTTCTCCCGCAGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RIGGQSKPEGMQKTWGLRGTSWT*ASPAGR Trigger: CCGACCTGCGGGAGAAGCTCAAGTCCATGACGTCCC...TCTGAGTCCCCAGGTTTTCTGCATGCCCTCTGGCTTGCTCTGCCCACCAATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR GCA 90 bp | AGGATTGGTGGGCAGAGCAAGCCAGAGGGCATGCAGAAAACCTGGGGACTCAGAGCCCGGTCCACCGTGTaGTCGTTGTACAGGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RIGGQSKPEGMQKTWGLRARSTV*SLYRPF Trigger: GAAGGGCCTGTACAACGAGCACACGGTGGACCGGGC...TCTGAGTCCCCAGGTTTTCTGCATGCCCTCTGGCTTGCTCTGCCCACCAATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR GCA 90 bp | GCACCATGCCTGGCTGCTTTGCTTTTTGAGACAAGGCCCAGGCAGGCCTTAAACCCTTGCGGGTGGGGCTaGTGGCTGCCTCTGGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: APCLAALLFETRPRQALNPCGWG*WLPLGN Trigger: ATTGCCCAGAGGCAGCCAGCAGCCCCACCCGCAAGG...GTTTAAGGCCTGCCTGGGCCTTGTCTCAAAAAGCAAAGCAGCCAGGCATGGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR TCA 90 bp | GCACCATGCCTGGCTGCTTTGCTTTTTGAGACAAGGCCCAGGCAGGCCTTAAACCAGCAGCATACCCACTaGGCACAGTCACGCTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: APCLAALLFETRPRQALNQQHTH*AQSRSP Trigger: GGGGGAGCGTGACTGTGCTCAGTGGGTATGCTGCTG...GTTTAAGGCCTGCCTGGGCCTTGTCTCAAAAAGCAAAGCAGCCAGGCATGGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR GCA 90 bp | CCAAAGACAAATGCCCAACTAAGACAGACAGAAAAGGCTGGATGCAGTGGCAAGCCCGGCCCGCGCTTCTaGAGCTGGGCCCCGTACGTG | + |
|
Preference number: 4 (lower is better) Translates to: PKTNAQLRQTEKAGCSGKPGPRF*SWAPYV Trigger: CACGTACGGGGCCCAGCTGCAGAAGCGCGGGCCGGG...CTTGCCACTGCATCCAGCCTTTTCTGTCTGTCTTAGTTGGGCATTTGTCTTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR GCA 90 bp | AGGATTGGTGGGCAGAGCAAGCCAGAGGGCATGCAGAAAACCTGGGGACTCAGAACACCACCTCATCGATaGGGGCCTCGATCTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RIGGQSKPEGMQKTWGLRTPPHR*GPRSWS Trigger: GCTCCAAGATCGAGGCCCGCATCGATGAGGTGGTGT...TCTGAGTCCCCAGGTTTTCTGCATGCCCTCTGGCTTGCTCTGCCCACCAATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CCA 90 bp | GCACCATGCCTGGCTGCTTTGCTTTTTGAGACAAGGCCCAGGCAGGCCTTAAACGGGCGCTCGAAGATGTaGATGGGGTCAACGTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: APCLAALLFETRPRQALNGRSKM*MGSTWD Trigger: GTCCCACGTTGACCCCATCCACATCTTCGAGCGCCC...GTTTAAGGCCTGCCTGGGCCTTGTCTCAAAAAGCAAAGCAGCCAGGCATGGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR TCA 90 bp | TGTCCCCATTGTCTCTACTGGCTACTCTGGTGTGAACAATTCTCTACAGAAGCCCGAAGCCCTCGGGGATaGCGCGGTGCTCCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CPHCLYWLLWCEQFSTEARSPRG*RGAPPA Trigger: AGCTGGTGGAGCACCGCGTCATCCCCGAGGGCTTCG...GGCTTCTGTAGAGAATTGTTCACACCAGAGTAGCCAGTAGAGACAATGGGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR CAA 72 bp | CTAGAATTCCATGAGGTGTATCCCTGGCCACCCTCCTaGAAGGGGAGAGGGCAGTGGGCAAACACAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEFHEVYPWPPS*KGRGQWANTSP Trigger: TGGACTTGTGTTTGCCCACTGCCCTCTCCCCTTCAAGGAGGGTGGCCAGGGATACACCTCATGGAATTCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR GCA 90 bp | GCAAGAGGCAGGAATAGGCTTCCTACCAAAGTCTTAAGGAGAGCACAAAACAGTGCTCCTCGTAGTCGCTaGGCTCGGGGTCCGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ARGRNRLPTKVLRRAQNSAPRSR*ARGPSP Trigger: AGGACTCGGACCCCGAGCGCAGCGACTACGAGGAGC...ACTGTTTTGTGCTCTCCTTAAGACTTTGGTAGGAAGCCTATTCCTGCCTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR GCA 90 bp | GCAAACTTGAACAGTGGGGAACAGGGTATTTGCATGAGATTCCAGAGCCTGGACTCGGGGATGACGCGGTaGTCCACCAGCTTCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ANLNSGEQGICMRFQSLDSGMTR*STSFWI Trigger: GATCCAGAAGCTGGTGGAGCACCGCGTCATCCCCGA...GTCCAGGCTCTGGAATCTCATGCAAATACCCTGTTCCCCACTGTTCAAGTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR GCA 90 bp | TGTCCCCATTGTCTCTACTGGCTACTCTGGTGTGAACAATTCTCTACAGAAGCCCAACGTGGGACACGATaGAGCCGCCGGGCTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CPHCLYWLLWCEQFSTEAQRGTR*SRRAGS Trigger: ACTACCAGCCCGGCGGCTGCATCGTGTCCCACGTTG...GGCTTCTGTAGAGAATTGTTCACACCAGAGTAGCCAGTAGAGACAATGGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CCA 90 bp | GCACCATGCCTGGCTGCTTTGCTTTTTGAGACAAGGCCCAGGCAGGCCTTAAACGATCTGAAGCATAGCTaGGTGGCAATGTGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: APCLAALLFETRPRQALNDLKHS*VAMWSC Trigger: GCAGCTCCACATTGCCACCCAGCTATGCTTCAGATC...GTTTAAGGCCTGCCTGGGCCTTGTCTCAAAAAGCAAAGCAGCCAGGCATGGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR GCA 90 bp | GACAGCTGTCCCCATTGTCTCTACTGGCTACTCTGGTGTGAACAATTCTCTACATCCTCATCTTCACCTTaGGGGTGGGGCTGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DSCPHCLYWLLWCEQFSTSSSSP*GWGCWL Trigger: CAGCCAGCAGCCCCACCCGCAAGGTGAAGATGAGGA...TGTAGAGAATTGTTCACACCAGAGTAGCCAGTAGAGACAATGGGGACAGCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR GCA 90 bp | TGTCCCCATTGTCTCTACTGGCTACTCTGGTGTGAACAATTCTCTACAGAAGCCTGCCGCTCTTCACCTTaGGCGCCTCTTCCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPHCLYWLLWCEQFSTEACRSSP*APLPPS Trigger: AGAAGGAGGAAGAGGCGCGCAAGGTGAAGAGCGGCA...GGCTTCTGTAGAGAATTGTTCACACCAGAGTAGCCAGTAGAGACAATGGGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR GCA 90 bp | GATGATATGGGAAAAGAGGCCCAAGATGGTCAAATGAGGAGAAAGAGACTAAAGGCCGGATCTGCCGGATaGCGCTCTTCACCTTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: DDMGKEAQDGQMRRKRLKAGSAG*RSSPCA Trigger: CGCGCAAGGTGAAGAGCGGCATCCGGCAGATCCGGC...CTTTAGTCTCTTTCTCCTCATTTGACCATCTTGGGCCTCTTTTCCCATATCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR GCA 90 bp | GATATGGGAAAAGAGGCCCAAGATGGTCAAATGAGGAGAAAGAGACTAAAGGGAGGTGGGGCTGCTGGCTaGCTCTGGGCAATCTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: DMGKEAQDGQMRRKRLKGGGAAG*LWAIFR Trigger: TCGGAAGATTGCCCAGAGGCAGCCAGCAGCCCCACC...TCCCTTTAGTCTCTTTCTCCTCATTTGACCATCTTGGGCCTCTTTTCCCATATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CCA 90 bp | GATATGGGAAAAGAGGCCCAAGATGGTCAAATGAGGAGAAAGAGACTAAAGGGATGGATGGGGTCAACGTaGGACACGATGCAGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: DMGKEAQDGQMRRKRLKGWMGST*DTMQPP Trigger: CGGCGGCTGCATCGTGTCCCACGTTGACCCCATCCA...TCCCTTTAGTCTCTTTCTCCTCATTTGACCATCTTGGGCCTCTTTTCCCATATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CCA 90 bp | TGTCCCCATTGTCTCTACTGGCTACTCTGGTGTGAACAATTCTCTACAGAAGCCTGCGGTGGGACCTTTTaGGTTTCAGCGCAGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPHCLYWLLWCEQFSTEACGGTF*VSAQGL Trigger: GAGACCCTGCGCTGAAACCCAAAAGGTCCCACCGCA...GGCTTCTGTAGAGAATTGTTCACACCAGAGTAGCCAGTAGAGACAATGGGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CCA 90 bp | GCAAGAGGCAGGAATAGGCTTCCTACCAAAGTCTTAAGGAGAGCACAAAACAGTGGGTCCGAGTCCTCCTaGTATTTCCGCTTGGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ARGRNRLPTKVLRRAQNSGSESS*YFRLVV Trigger: GACCACCAAGCGGAAATACCAGGAGGACTCGGACCC...ACTGTTTTGTGCTCTCCTTAAGACTTTGGTAGGAAGCCTATTCCTGCCTCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| 3UTR CAA 72 bp | GGCTTGACCAAGATTCACAGTGGCAATTTGAGCAAATaGGCTCAGATCACTGGAGCAGAGCTGGAGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLTKIHSGNLSK*AQITGAELESC Trigger: GCAGCTCTCCAGCTCTGCTCCAGTGATCTGAGCCAATTTGCTCAAATTGCCACTGTGAATCTTGGTCAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR GCA 90 bp | GATGATATGGGAAAAGAGGCCCAAGATGGTCAAATGAGGAGAAAGAGACTAAAGCTGAAGAGCCGGATCTaGCGGATGCCGCTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: DDMGKEAQDGQMRRKRLKLKSRI*RMPLFT Trigger: GGTGAAGAGCGGCATCCGGCAGATCCGGCTCTTCAG...CTTTAGTCTCTTTCTCCTCATTTGACCATCTTGGGCCTCTTTTCCCATATCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CCA 90 bp | GACAGCTGTCCCCATTGTCTCTACTGGCTACTCTGGTGTGAACAATTCTCTACACGGATGGGCTTGAACTaGAACTTGCAGCCGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DSCPHCLYWLLWCEQFSTRMGLN*NLQPKQ Trigger: TTGCTTCGGCTGCAAGTTCCAGTTCAAGCCCATCCG...TGTAGAGAATTGTTCACACCAGAGTAGCCAGTAGAGACAATGGGGACAGCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CCA 90 bp | GTTAATGGGCTCTACTGCCTTCCTATACATTATAGAACACCTTTACATGCATGTAGGATCCGGGGCCTGTaGGCAGCATCAGGGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VNGLYCLPIHYRTPLHACRIRGL*AASGSA Trigger: GGCAGACCCTGATGCTGCCCACAGGCCCCGGATCCT...ACATGCATGTAAAGGTGTTCTATAATGTATAGGAAGGCAGTAGAGCCCATTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CCA 90 bp | GATGATATGGGAAAAGAGGCCCAAGATGGTCAAATGAGGAGAAAGAGACTAAAGGGGTCTGCCTTGCGGTaGGACCTTTTGGGTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DDMGKEAQDGQMRRKRLKGSALR*DLLGFS Trigger: GCTGAAACCCAAAAGGTCCCACCGCAAGGCAGACCC...CTTTAGTCTCTTTCTCCTCATTTGACCATCTTGGGCCTCTTTTCCCATATCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR TCA 90 bp | GATATGGGAAAAGAGGCCCAAGATGGTCAAATGAGGAGAAAGAGACTAAAGGGAAAAGTGCCGAGTCGCTaGAGAAAGACACGGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: DMGKEAQDGQMRRKRLKGKVPSR*RKTRTR Trigger: TCGTGTCCGTGTCTTTCTTCAGCGACTCGGCACTTT...TCCCTTTAGTCTCTTTCTCCTCATTTGACCATCTTGGGCCTCTTTTCCCATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CCA 90 bp | GATGATATGGGAAAAGAGGCCCAAGATGGTCAAATGAGGAGAAAGAGACTAAAGAAGACACGGACACGATaGGGCGCTCGAAGATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DDMGKEAQDGQMRRKRLKKTRTR*GARRCG Trigger: TCCACATCTTCGAGCGCCCCATCGTGTCCGTGTCTT...CTTTAGTCTCTTTCTCCTCATTTGACCATCTTGGGCCTCTTTTCCCATATCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR GCA 90 bp | AACATTTTGTGTGTTTCAATAAACTTCCACTTGAAGACAGCTGTCCCCATTGTCGGCAGCATCAGGGTCTaGCTTGCGGTGGGACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NILCVSINFHLKTAVPIVGSIRV*LAVGPF Trigger: AAAAGGTCCCACCGCAAGGCAGACCCTGATGCTGCC...GACAATGGGGACAGCTGTCTTCAAGTGGAAGTTTATTGAAACACACAAAATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR GCA 90 bp | CCAAAGACAAATGCCCAACTAAGACAGACAGAAAAGGCTGGATGCAGTGGCAAGAGGACTCATAGGATTTaGGCCAATAGTTCTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKTNAQLRQTEKAGCSGKRTHRI*ANSSQS Trigger: GCTCTGAGAACTATTGGCGCAAATCCTATGAGTCCT...CTTGCCACTGCATCCAGCCTTTTCTGTCTGTCTTAGTTGGGCATTTGTCTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CCA 90 bp | AAGGAGGAAAGCCAAGAACAAAAGAACCCAGGTCTTTTACCAATTCGCTCTTTAGCTCGAAGATGTGGATaGGGTCAACGTGGGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: KEESQEQKNPGLLPIRSLARRCG*GQRGTR Trigger: TCGTGTCCCACGTTGACCCCATCCACATCTTCGAGC...TAAAGAGCGAATTGGTAAAAGACCTGGGTTCTTTTGTTCTTGGCTTTCCTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR TCA 90 bp | GATGATATGGGAAAAGAGGCCCAAGATGGTCAAATGAGGAGAAAGAGACTAAAGGCCGTATGCAGTGAGTaGTTTCATCAGCAGCATACC | + |
|
Preference number: 4 (lower is better) Translates to: DDMGKEAQDGQMRRKRLKAVCSE*FHQQHT Trigger: GGTATGCTGCTGATGAAATCACTCACTGCATACGGC...CTTTAGTCTCTTTCTCCTCATTTGACCATCTTGGGCCTCTTTTCCCATATCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR GCA 90 bp | TACTGCCTTCCTATACATTATAGAACACCTTTACATGCATGTAAGCATGTCATACATCAGGGTCTGCCTTaGGGTGGGACCTTTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YCLPIHYRTPLHACKHVIHQGLP*GGTFWV Trigger: AACCCAAAAGGTCCCACCGCAAGGCAGACCCTGATG...TATGACATGCTTACATGCATGTAAAGGTGTTCTATAATGTATAGGAAGGCAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CCA 90 bp | TACTGCCTTCCTATACATTATAGAACACCTTTACATGCATGTAAGCATGTCATATCAGCGCAGGGTCTCTaGTGTTTCCTGACAGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: YCLPIHYRTPLHACKHVISAQGL*CFLTGD Trigger: ATCGCCTGTCAGGAAACACCAGAGACCCTGCGCTGA...TATGACATGCTTACATGCATGTAAAGGTGTTCTATAATGTATAGGAAGGCAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CCA 90 bp | TACTGCCTTCCTATACATTATAGAACACCTTTACATGCATGTAAGCATGTCATAAGCTGGGTGGCAATGTaGAGCTGCTCAGGGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YCLPIHYRTPLHACKHVISWVAM*SCSGIL Trigger: CAAAATCCCTGAGCAGCTCCACATTGCCACCCAGCT...TATGACATGCTTACATGCATGTAAAGGTGTTCTATAATGTATAGGAAGGCAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS TCA 90 bp | CCACCTCATCGATGCGGGCCTCGATCTTGGAGCACTCATCCTGACTaGAGAGCCGGATCTGCCGGATGCCGCTCTTCACCTTGCGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPHRCGPRSWSTHPD*RAGSAGCRSSPCAP Trigger: AGGCGCGCAAGGTGAAGAGCGGCATCCGGCAGATCCGGCTCTTCAGTCAGGATGAGTGCTCCAAGATCGAGGCCCGCATCGATGAGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS GCA 90 bp | TGCGCGCCTCTTCCTCCTTCTGCAACTGATGCTCCTCGTAGTCGCTaGGCTCGGGGTCCGAGTCCTCCTGGTATTTCCGCTTGGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CAPLPPSATDAPRSR*ARGPSPPGISAWWS Trigger: GGACCACCAAGCGGAAATACCAGGAGGACTCGGACCCCGAGCGCAGCGACTACGAGGAGCATCAGTTGCAGAAGGAGGAAGAGGCGCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS TCA 90 bp | GACACCACCTCATCGATGCGGGCCTCGATCTTGGAGCACTCATCCTaGCTGAAGAGCCGGATCTGCCGGATGCCGCTCTTCACCTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: DTTSSMRASILEHSS*LKSRICRMPLFTLR Trigger: GCGCAAGGTGAAGAGCGGCATCCGGCAGATCCGGCTCTTCAGTCAGGATGAGTGCTCCAAGATCGAGGCCCGCATCGATGAGGTGGTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS GCA 90 bp | CCATTTCCAGGATCCGGGGCCTGTGGGCAGCATCAGGGTCTGCCTTaGGGTGGGACCTTTTGGGTTTCAGCGCAGGGTCTCTGGTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PFPGSGACGQHQGLP*GGTFWVSAQGLWCF Trigger: GAAACACCAGAGACCCTGCGCTGAAACCCAAAAGGTCCCACCGCAAGGCAGACCCTGATGCTGCCCACAGGCCCCGGATCCTGGAAATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CAA 90 bp | AGGATTGGTGGGCAGAGCAAGCCAGAGGGCATGCAGAAAACCTGGGGACTCAGATCCACCGTGTGCTCGTaGTACAGGCCCTTCTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RIGGQSKPEGMQKTWGLRSTVCS*YRPFSA Trigger: CGCCGAGAAGGGCCTGTACAACGAGCACACGGTGGA...TCTGAGTCCCCAGGTTTTCTGCATGCCCTCTGGCTTGCTCTGCCCACCAATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS GCA 90 bp | CGACACCCGGATGGGCTTGAACTGGAACTTGCAGCCGAAGCAAAGTaGCGAGTCGCTGAAGAAAGACACGGACACGATGGGGCGCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: RHPDGLELELAAEAK*RVAEERHGHDGALE Trigger: TTCGAGCGCCCCATCGTGTCCGTGTCTTTCTTCAGCGACTCGGCACTTTGCTTCGGCTGCAAGTTCCAGTTCAAGCCCATCCGGGTGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CAA 90 bp | AGGATTGGTGGGCAGAGCAAGCCAGAGGGCATGCAGAAAACCTGGGGACTCAGATTGATGACCGCGCTGTaGACGAAGCCCTCGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RIGGQSKPEGMQKTWGLRLMTAL*TKPSGM Trigger: CATCCCCGAGGGCTTCGTCAACAGCGCGGTCATCAA...TCTGAGTCCCCAGGTTTTCTGCATGCCCTCTGGCTTGCTCTGCCCACCAATCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS CCA 90 bp | GGTCTGCCTTGCGGTGGGACCTTTTGGGTTTCAGCGCAGGGTCTCTaGTGTTTCCTGACAGGCGATCTGAAGCATAGCTGGGTGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: GLPCGGTFWVSAQGL*CFLTGDLKHSWVAM Trigger: CATTGCCACCCAGCTATGCTTCAGATCGCCTGTCAGGAAACACCAGAGACCCTGCGCTGAAACCCAAAAGGTCCCACCGCAAGGCAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS CCA 90 bp | ACCGGCAGAGAAAGCACAGGTTCCGACACCCGGATGGGCTTGAACTaGAACTTGCAGCCGAAGCAAAGTGCCGAGTCGCTGAAGAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TGRESTGSDTRMGLN*NLQPKQSAESLKKD Trigger: GTCTTTCTTCAGCGACTCGGCACTTTGCTTCGGCTGCAAGTTCCAGTTCAAGCCCATCCGGGTGTCGGAACCTGTGCTTTCTCTGCCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS CCA 90 bp | GCGCAGGGTCTCTGGTGTTTCCTGACAGGCGATCTGAAGCATAGCTaGGTGGCAATGTGGAGCTGCTCAGGGATTTTGTTTCCAATCGCG | + |
|
Preference number: 5 (lower is better) Translates to: AQGLWCFLTGDLKHS*VAMWSCSGILFPIA Trigger: CGCGATTGGAAACAAAATCCCTGAGCAGCTCCACATTGCCACCCAGCTATGCTTCAGATCGCCTGTCAGGAAACACCAGAGACCCTGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CAA 90 bp | GACAGCTGTCCCCATTGTCTCTACTGGCTACTCTGGTGTGAACAATTCTCTACAATGCCGCTCTTCACCTaGCGCGCCTCTTCCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DSCPHCLYWLLWCEQFSTMPLFT*RASSSF Trigger: GAAGGAGGAAGAGGCGCGCAAGGTGAAGAGCGGCAT...TGTAGAGAATTGTTCACACCAGAGTAGCCAGTAGAGACAATGGGGACAGCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CAA 90 bp | CCAAAGACAAATGCCCAACTAAGACAGACAGAAAAGGCTGGATGCAGTGGCAAGGACACCCGGATGGGCTaGAACTGGAACTTGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PKTNAQLRQTEKAGCSGKDTRMG*NWNLQP Trigger: CGGCTGCAAGTTCCAGTTCAAGCCCATCCGGGTGTC...CTTGCCACTGCATCCAGCCTTTTCTGTCTGTCTTAGTTGGGCATTTGTCTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CAA 90 bp | CCAAAGACAAATGCCCAACTAAGACAGACAGAAAAGGCTGGATGCAGTGGCAAGGCATCAGGGTCTGCCTaGCGGTGGGACCTTTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PKTNAQLRQTEKAGCSGKASGSA*RWDLLG Trigger: ACCCAAAAGGTCCCACCGCAAGGCAGACCCTGATGC...CTTGCCACTGCATCCAGCCTTTTCTGTCTGTCTTAGTTGGGCATTTGTCTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CAA 90 bp | GCAAACTTGAACAGTGGGGAACAGGGTATTTGCATGAGATTCCAGAGCCTGGACGGCTTGAACTGGAACTaGCAGCCGAAGCAAAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ANLNSGEQGICMRFQSLDGLNWN*QPKQSA Trigger: GGCACTTTGCTTCGGCTGCAAGTTCCAGTTCAAGCC...GTCCAGGCTCTGGAATCTCATGCAAATACCCTGTTCCCCACTGTTCAAGTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS CCA 90 bp | TGGTGTTTCCTGACAGGCGATCTGAAGCATAGCTGGGTGGCAATGTaGAGCTGCTCAGGGATTTTGTTTCCAATCGCGGTGCATCTAATC | + |
|
Preference number: 5 (lower is better) Translates to: WCFLTGDLKHSWVAM*SCSGILFPIAVHLI Trigger: GATTAGATGCACCGCGATTGGAAACAAAATCCCTGAGCAGCTCCACATTGCCACCCAGCTATGCTTCAGATCGCCTGTCAGGAAACACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CAA 90 bp | GATGATATGGGAAAAGAGGCCCAAGATGGTCAAATGAGGAGAAAGAGACTAAAGCGGGACGTCATGGACTaGAGCTTCTCCCGCAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: DDMGKEAQDGQMRRKRLKRDVMD*SFSRRS Trigger: CGACCTGCGGGAGAAGCTCAAGTCCATGACGTCCCG...CTTTAGTCTCTTTCTCCTCATTTGACCATCTTGGGCCTCTTTTCCCATATCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS GCA 90 bp | TTCCTGACAGGCGATCTGAAGCATAGCTGGGTGGCAATGTGGAGCTaGTCAGGGATTTTGTTTCCAATCGCGGTGCATCTAATCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FLTGDLKHSWVAMWS*SGILFPIAVHLILS Trigger: AGACAAGATTAGATGCACCGCGATTGGAAACAAAATCCCTGAGCAGCTCCACATTGCCACCCAGCTATGCTTCAGATCGCCTGTCAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CAA 90 bp | GCAAGAGGCAGGAATAGGCTTCCTACCAAAGTCTTAAGGAGAGCACAAAACAGTCGCCGGTTTTCTTCTTaGTCCATTTCCAGGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ARGRNRLPTKVLRRAQNSRRFSS*SISRIR Trigger: CCGGATCCTGGAAATGGACAAAGAAGAAAACCGGCG...ACTGTTTTGTGCTCTCCTTAAGACTTTGGTAGGAAGCCTATTCCTGCCTCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS-3UTR CAA 90 bp | TTCTCTACAGAAGCCAACAGCTTTTTCCATCAAGGAGGAAAGCCAAGAACAAAATTGCGGTGGGACCTTTaGGGTTTCAGCGCAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FSTEANSFFHQGGKPRTKLRWDL*GFSAGS Trigger: AGACCCTGCGCTGAAACCCAAAAGGTCCCACCGCAA...TTTTGTTCTTGGCTTTCCTCCTTGATGGAAAAAGCTGTTGGCTTCTGTAGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS CCA 72 bp | GCTCGGGGTCCGAGTCCTCCTGGTATTTCCGCTTGGTaGTCCCGGACGCCGGGTAAGGCTCAGCGGCGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: ARGPSPPGISAW*SRTPGKAQRRP Trigger: CGGCCGCCGCTGAGCCTTACCCGGCGTCCGGGACCACCAAGCGGAAATACCAGGAGGACTCGGACCCCGAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS CCA 72 bp | TGCGCTCGGGGTCCGAGTCCTCCTGGTATTTCCGCTTaGTGGTCCCGGACGCCGGGTAAGGCTCAGCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: CARGPSPPGISA*WSRTPGKAQRR Trigger: CCGCCGCTGAGCCTTACCCGGCGTCCGGGACCACCAAGCGGAAATACCAGGAGGACTCGGACCCCGAGCGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS TCA 72 bp | TGCCCGCCTTGTAGTTGTCCCGGGACGTCATGGACTTaGGCTTCTCCCGCAGGTCGGTGTAGCCGCTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: CPPCSCPGTSWT*ASPAGRCSRWR Trigger: CCGCCAGCGGCTACACCGACCTGCGGGAGAAGCTCAAGTCCATGACGTCCCGGGACAACTACAAGGCGGGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS GCA 72 bp | GGATCCGGGGCCTGTGGGCAGCATCAGGGTCTGCCTTaGGGTGGGACCTTTTGGGTTTCAGCGCAGGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GSGACGQHQGLP*GGTFWVSAQGL Trigger: GAGACCCTGCGCTGAAACCCAAAAGGTCCCACCGCAAGGCAGACCCTGATGCTGCCCACAGGCCCCGGATCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS GCA 72 bp | TTCCAGGATCCGGGGCCTGTGGGCAGCATCAGGGTCTaGCTTGCGGTGGGACCTTTTGGGTTTCAGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FQDPGPVGSIRV*LAVGPFGFQRR Trigger: CCTGCGCTGAAACCCAAAAGGTCCCACCGCAAGGCAGACCCTGATGCTGCCCACAGGCCCCGGATCCTGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS CCA 72 bp | AAGACACGGACACGATGGGGCGCTCGAAGATGTGGATaGGGTCAACGTGGGACACGATGCAGCCGCCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: KTRTRWGARRCG*GQRGTRCSRRA Trigger: AGCCCGGCGGCTGCATCGTGTCCCACGTTGACCCCATCCACATCTTCGAGCGCCCCATCGTGTCCGTGTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS CAA 72 bp | AGGATCCGGGGCCTGTGGGCAGCATCAGGGTCTGCCTaGCGGTGGGACCTTTTGGGTTTCAGCGCAGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RIRGLWAASGSA*RWDLLGFSAGS Trigger: AGACCCTGCGCTGAAACCCAAAAGGTCCCACCGCAAGGCAGACCCTGATGCTGCCCACAGGCCCCGGATCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS CAA 90 bp | CTCCGCCGGTGTGTGGGCAGGAGCACAGACCGCCGGTTTTCTTCTTaGTCCATTTCCAGGATCCGGGGCCTGTGGGCAGCATCAGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LRRCVGRSTDRRFSS*SISRIRGLWAASGS Trigger: AGACCCTGATGCTGCCCACAGGCCCCGGATCCTGGAAATGGACAAAGAAGAAAACCGGCGGTCTGTGCTCCTGCCCACACACCGGCGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS TCA 72 bp | CGATGCGGGCCTCGATCTTGGAGCACTCATCCTGACTaGAGAGCCGGATCTGCCGGATGCCGCTCTTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: RCGPRSWSTHPD*RAGSAGCRSSP Trigger: AGGTGAAGAGCGGCATCCGGCAGATCCGGCTCTTCAGTCAGGATGAGTGCTCCAAGATCGAGGCCCGCATCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS CCA 72 bp | AAGAAAGACACGGACACGATGGGGCGCTCGAAGATGTaGATGGGGTCAACGTGGGACACGATGCAGCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: KKDTDTMGRSKM*MGSTWDTMQPP Trigger: CGGCGGCTGCATCGTGTCCCACGTTGACCCCATCCACATCTTCGAGCGCCCCATCGTGTCCGTGTCTTTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS CAA 90 bp | CTGCGCACCGGCAGAGAAAGCACAGGTTCCGACACCCGGATGGGCTaGAACTGGAACTTGCAGCCGAAGCAAAGTGCCGAGTCGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LRTGRESTGSDTRMG*NWNLQPKQSAESLK Trigger: CTTCAGCGACTCGGCACTTTGCTTCGGCTGCAAGTTCCAGTTCAAGCCCATCCGGGTGTCGGAACCTGTGCTTTCTCTGCCGGTGCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS CAA 90 bp | TCCATTTCCAGGATCCGGGGCCTGTGGGCAGCATCAGGGTCTGCCTaGCGGTGGGACCTTTTGGGTTTCAGCGCAGGGTCTCTGGTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SISRIRGLWAASGSA*RWDLLGFSAGSLVF Trigger: AAACACCAGAGACCCTGCGCTGAAACCCAAAAGGTCCCACCGCAAGGCAGACCCTGATGCTGCCCACAGGCCCCGGATCCTGGAAATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS TCA 72 bp | TCATCGATGCGGGCCTCGATCTTGGAGCACTCATCCTaGCTGAAGAGCCGGATCTGCCGGATGCCGCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSMRASILEHSS*LKSRICRMPLF Trigger: GAAGAGCGGCATCCGGCAGATCCGGCTCTTCAGTCAGGATGAGTGCTCCAAGATCGAGGCCCGCATCGATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS GCA 72 bp | CTTCCTCCTTCTGCAACTGATGCTCCTCGTAGTCGCTaGGCTCGGGGTCCGAGTCCTCCTGGTATTTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LPPSATDAPRSR*ARGPSPPGISA Trigger: AGCGGAAATACCAGGAGGACTCGGACCCCGAGCGCAGCGACTACGAGGAGCATCAGTTGCAGAAGGAGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
||
| CDS CCA 72 bp | GGGCAGCATCAGGGTCTGCCTTGCGGTGGGACCTTTTaGGTTTCAGCGCAGGGTCTCTGGTGTTTCCTGACA | + |
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Preference number: 6 (lower is better) Translates to: GQHQGLPCGGTF*VSAQGLWCFLT Trigger: TGTCAGGAAACACCAGAGACCCTGCGCTGAAACCCAAAAGGTCCCACCGCAAGGCAGACCCTGATGCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| CDS CCA 72 bp | AGTGTCTCCTCATCTTCACCTTGCGGGTGGGGCTGCTaGCTGCCTCTGGGCAATCTTCCGAGGACTCATAGG | + |
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Preference number: 6 (lower is better) Translates to: SVSSSSPCGWGC*LPLGNLPRTHR Trigger: CCTATGAGTCCTCGGAAGATTGCCCAGAGGCAGCCAGCAGCCCCACCCGCAAGGTGAAGATGAGGAGACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| CDS CAA 72 bp | TGGGCAGCATCAGGGTCTGCCTTGCGGTGGGACCTTTaGGGTTTCAGCGCAGGGTCTCTGGTGTTTCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: WAASGSALRWDL*GFSAGSLVFPD Trigger: GTCAGGAAACACCAGAGACCCTGCGCTGAAACCCAAAAGGTCCCACCGCAAGGCAGACCCTGATGCTGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| CDS CCA 72 bp | GAAAGCACAGGTTCCGACACCCGGATGGGCTTGAACTaGAACTTGCAGCCGAAGCAAAGTGCCGAGTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: ESTGSDTRMGLN*NLQPKQSAESL Trigger: CAGCGACTCGGCACTTTGCTTCGGCTGCAAGTTCCAGTTCAAGCCCATCCGGGTGTCGGAACCTGTGCTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| CDS CAA 72 bp | GGCAGAGAAAGCACAGGTTCCGACACCCGGATGGGCTaGAACTGGAACTTGCAGCCGAAGCAAAGTGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: GRESTGSDTRMG*NWNLQPKQSAE Trigger: CTCGGCACTTTGCTTCGGCTGCAAGTTCCAGTTCAAGCCCATCCGGGTGTCGGAACCTGTGCTTTCTCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| CDS TCA 72 bp | ACTGGAACTTGCAGCCGAAGCAAAGTGCCGAGTCGCTaGAGAAAGACACGGACACGATGGGGCGCTCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: TGTCSRSKVPSR*RKTRTRWGARR Trigger: TCTTCGAGCGCCCCATCGTGTCCGTGTCTTTCTTCAGCGACTCGGCACTTTGCTTCGGCTGCAAGTTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| CDS CCA 72 bp | TGCGGTGGGACCTTTTGGGTTTCAGCGCAGGGTCTCTaGTGTTTCCTGACAGGCGATCTGAAGCATAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: CGGTFWVSAQGL*CFLTGDLKHSW Trigger: CCAGCTATGCTTCAGATCGCCTGTCAGGAAACACCAGAGACCCTGCGCTGAAACCCAAAAGGTCCCACCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| CDS CAA 90 bp | AGAGAAAGCACAGGTTCCGACACCCGGATGGGCTTGAACTGGAACTaGCAGCCGAAGCAAAGTGCCGAGTCGCTGAAGAAAGACACGGAC | + |
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Preference number: 6 (lower is better) Translates to: RESTGSDTRMGLNWN*QPKQSAESLKKDTD Trigger: GTCCGTGTCTTTCTTCAGCGACTCGGCACTTTGCTTCGGCTGCAAGTTCCAGTTCAAGCCCATCCGGGTGTCGGAACCTGTGCTTTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| CDS GCA 72 bp | GATGGGCTTGAACTGGAACTTGCAGCCGAAGCAAAGTaGCGAGTCGCTGAAGAAAGACACGGACACGATGGG | + |
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Preference number: 6 (lower is better) Translates to: DGLELELAAEAK*RVAEERHGHDG Trigger: CCCATCGTGTCCGTGTCTTTCTTCAGCGACTCGGCACTTTGCTTCGGCTGCAAGTTCCAGTTCAAGCCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| CDS CAA 72 bp | ACAGGTTCCGACACCCGGATGGGCTTGAACTGGAACTaGCAGCCGAAGCAAAGTGCCGAGTCGCTGAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: TGSDTRMGLNWN*QPKQSAESLKK Trigger: TTTCTTCAGCGACTCGGCACTTTGCTTCGGCTGCAAGTTCCAGTTCAAGCCCATCCGGGTGTCGGAACCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| CDS CCA 72 bp | CTGACAGGCGATCTGAAGCATAGCTGGGTGGCAATGTaGAGCTGCTCAGGGATTTTGTTTCCAATCGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: LTGDLKHSWVAM*SCSGILFPIAV Trigger: CACCGCGATTGGAAACAAAATCCCTGAGCAGCTCCACATTGCCACCCAGCTATGCTTCAGATCGCCTGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| CDS GCA 72 bp | GGCGATCTGAAGCATAGCTGGGTGGCAATGTGGAGCTaGTCAGGGATTTTGTTTCCAATCGCGGTGCATCTA | + |
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Preference number: 6 (lower is better) Translates to: GDLKHSWVAMWS*SGILFPIAVHL Trigger: TAGATGCACCGCGATTGGAAACAAAATCCCTGAGCAGCTCCACATTGCCACCCAGCTATGCTTCAGATCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| CDS CCA 72 bp | CTCTGGTGTTTCCTGACAGGCGATCTGAAGCATAGCTaGGTGGCAATGTGGAGCTGCTCAGGGATTTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: LWCFLTGDLKHS*VAMWSCSGILF Trigger: AAACAAAATCCCTGAGCAGCTCCACATTGCCACCCAGCTATGCTTCAGATCGCCTGTCAGGAAACACCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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| CDS CAA 72 bp | CATAGCTGGGTGGCAATGTGGAGCTGCTCAGGGATTTaGTTTCCAATCGCGGTGCATCTAATCTTGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: HSWVAMWSCSGI*FPIAVHLILSS Trigger: GGAAGACAAGATTAGATGCACCGCGATTGGAAACAAAATCCCTGAGCAGCTCCACATTGCCACCCAGCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044250.4 |
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