Pregenerated sensors for ALKBH4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039754Ensembl transcript IDs: ENSMUST00000041100.4, ENSMUST00000100568.3, ENSMUST00000125923.2, ENSMUST00000143229.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGGCGGGCCTTGATGTGTCTGCGGTGGATGGCGTGTGTCCACTGGTaGCTCGCGGCCCCTGTAAGCACCAGCAAGGAGCGGCGGGGTACT | + |
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Preference number: 1 (lower is better) Translates to: RRALMCLRWMACVHW*LAAPVSTSKERRGT Trigger: AGTACCCCGCCGCTCCTTGCTGGTGCTTACAGGGGCCGCGAGGCACCAGTGGACACACGCCATCCACCGCAGACACATCAAGGCCCGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR CCA 90 bp | ACACGGCGGGCCTTGATGTGTCTGCGGTGGATGGCGTGTGTCCACTaGTGCCTCGCGGCCCCTGTAAGCACCAGCAAGGAGCGGCGGGGT | + |
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Preference number: 1 (lower is better) Translates to: TRRALMCLRWMACVH*CLAAPVSTSKERRG Trigger: ACCCCGCCGCTCCTTGCTGGTGCTTACAGGGGCCGCGAGGCACCAGTGGACACACGCCATCCACCGCAGACACATCAAGGCCCGCCGTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR CCA 90 bp | TCCCTGAAGGTGGCGCACACACGGCGGGCCTTGATGTGTCTGCGGTaGATGGCGTGTGTCCACTGGTGCCTCGCGGCCCCTGTAAGCACC | + |
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Preference number: 1 (lower is better) Translates to: SLKVAHTRRALMCLR*MACVHWCLAAPVST Trigger: GGTGCTTACAGGGGCCGCGAGGCACCAGTGGACACACGCCATCCACCGCAGACACATCAAGGCCCGCCGTGTGTGCGCCACCTTCAGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR CCA 90 bp | ACCAGCAAGGAGCGGCGGGGTACTGTGATGGCCACCTCCACCTCCTaGCAGGGGACAGACCTGCTAGGAGCCACAAGGCTGTCCTCAAAA | + |
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Preference number: 1 (lower is better) Translates to: TSKERRGTVMATSTS*QGTDLLGATRLSSK Trigger: TTTTGAGGACAGCCTTGTGGCTCCTAGCAGGTCTGTCCCCTGCCAGGAGGTGGAGGTGGCCATCACAGTACCCCGCCGCTCCTTGCTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR CCA 90 bp | CCAGGGGTCGCAGTCCATCAGACGCACCATCTCAGCTTCTTCCTCTaGGGTCACAAAGTCCTGTATCAGTGTCACTCCTGGGAAGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: PGVAVHQTHHLSFFL*GHKVLYQCHSWEGE Trigger: TTCCCCTTCCCAGGAGTGACACTGATACAGGACTTTGTGACCCCAGAGGAAGAAGCTGAGATGGTGCGTCTGATGGACTGCGACCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR CCA 90 bp | ATTCAAGAGGTAGAGGCAGGAGGATCCGGAGTTCAAAGTCATCCTTaGCTGGAAACAGAGTCTGAGGCCAGTCTAGGCCGGAGACCCTGT | + |
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Preference number: 1 (lower is better) Translates to: IQEVEAGGSGVQSHP*LETESEASLGRRPC Trigger: ACAGGGTCTCCGGCCTAGACTGGCCTCAGACTCTGTTTCCAGCCAAGGATGACTTTGAACTCCGGATCCTCCTGCCTCTACCTCTTGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| 3UTR TCA 90 bp | AAAATTAACTTTAGGGCCATAGTCCTGCTTCTTCCTCCCAGACTGTaGGAGCTTCCAGGGGTCGCAGTCCATCAGACGCACCATCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: KINFRAIVLLLPPRL*ELPGVAVHQTHHLS Trigger: GCTGAGATGGTGCGTCTGATGGACTGCGACCCCTGGAAGCTCTCACAGTCTGGGAGGAAGAAGCAGGACTATGGCCCTAAAGTTAATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR CCA 90 bp | AGGCCCATTCTCTGGACTACCTTCTGGCTAAAGCCAGGGAGACCCTaGAAGCCTGCCATCTTCAGCTTCTGCTTCCGAAAATTAACTTTA | + |
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Preference number: 1 (lower is better) Translates to: RPILWTTFWLKPGRP*KPAIFSFCFRKLTL Trigger: TAAAGTTAATTTTCGGAAGCAGAAGCTGAAGATGGCAGGCTTCCAGGGTCTCCCTGGCTTTAGCCAGAAGGTAGTCCAGAGAATGGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGCATCAGGTCTGACGGAGGGGGCTGAGCAGAGAAGCAGGCTGCCAGGGGCCAGAGCCCTCGGCCCCTaGGGCCCAGCCTGTGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: KASGLTEGAEQRSRLPGARALGP*GPACVW Trigger: CCAGACACAGGCTGGGCCGCAGGGGCCGAGGGCTCT...GGCCCCTGGCAGCCTGCTTCTCTGCTCAGCCCCCTCCGTCAGACCTGATGCTTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGACACCACTGTGGCTGACAGGAGGTTGAGGCTCACCAGCCGCTCGCCCCACCAGGCGTCGTCCAAGTaGGGGTCGATGGCGGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: MDTTVADRRLRLTSRSPHQASSK*GSMAEP Trigger: GGGCTCCGCCATCGACCCCCACTTGGACGACGCCTG...GTGGGGCGAGCGGCTGGTGAGCCTCAACCTCCTGTCAGCCACAGTGGTGTCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000125923.2 ENSMUST00000143229.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTGGAGACATGGACACCACTGTGGCTGACAGGAGGTTGAGGCTCACCAGCCCAAGTGGGGGTCGATaGCGGAGCCCCGCTCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: ASGDMDTTVADRRLRLTSPSGGR*RSPAQG Trigger: GCCCTGAGCGGGGCTCCGCCATCGACCCCCACTTGG...GCTGGTGAGCCTCAACCTCCTGTCAGCCACAGTGGTGTCCATGTCTCCAGAGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000125923.2 ENSMUST00000143229.2 |
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| 3UTR CAA 90 bp | AACTCACTGGACAGCTCCCTGAAGGTGGCGCACACACGGCGGGCCTaGATGTGTCTGCGGTGGATGGCGTGTGTCCACTGGTGCCTCGCG | + |
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Preference number: 2 (lower is better) Translates to: NSLDSSLKVAHTRRA*MCLRWMACVHWCLA Trigger: CGCGAGGCACCAGTGGACACACGCCATCCACCGCAGACACATCAAGGCCCGCCGTGTGTGCGCCACCTTCAGGGAGCTGTCCAGTGAGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCAGGCCCAGCAGAACCAGCTCCGGGCAGGACATACGATGCTCATGACGTCATTTTGGCCAGGCCAGTaGCAGCTCCTGGGCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: AQAQQNQLRAGHTMLMTSFWPGQ*QLLGPG Trigger: CCCAGGGCCCAGGAGCTGTCACTGGCCTGGCCAAAA...TGACGTCATGAGCATCGTATGTCCTGCCCGGAGCTGGTTCTGCTGGGCCTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| 3UTR-3UTR TCA 90 bp | AGGCTGAGGCAGGAGGATGGGGAGTTCCAGGCCAGTCTAGCCCATGTGAGGCCTTTTTGGCCAGGCCAGTaGCAGCTCCTGGGCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: RLRQEDGEFQASLAHVRPFWPGQ*QLLGPG Trigger: CCCAGGGCCCAGGAGCTGTCACTGGCCTGGCCAAAA...AGGCCTCACATGGGCTAGACTGGCCTGGAACTCCCCATCCTCCTGCCTCAGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| 3UTR-3UTR CCA 90 bp | CGTCGTCCAAGTGGGGGTCGATGGCGGAGCCCCGCTCAGGGCTGTAGTCCAGATGGCCCAGCCTGTGTCTaGGCAGTAGAGGAAACAGCA | + |
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Preference number: 2 (lower is better) Translates to: RRPSGGRWRSPAQGCSPDGPACV*AVEETA Trigger: TGCTGTTTCCTCTACTGCCCAGACACAGGCTGGGCC...ATCTGGACTACAGCCCTGAGCGGGGCTCCGCCATCGACCCCCACTTGGACGACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGGCCCAGCAGAACCAGCTCCGGGCAGGACATACGATGCTCATGACGTCAGCTGAGGCAGGAGGATaGGGAGTTCCAGGCCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: AQAQQNQLRAGHTMLMTSAEAGG*GVPGQS Trigger: AGACTGGCCTGGAACTCCCCATCCTCCTGCCTCAGC...TGACGTCATGAGCATCGTATGTCCTGCCCGGAGCTGGTTCTGCTGGGCCTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCCCAGTTCTTGCTGCTTCCCTCCAGGCAGGAACTCACTGGACAGCTCCCTGCACTGTTCCACAGGCTaGAAGTCCTCCAGCCCCGGG | + |
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Preference number: 2 (lower is better) Translates to: WPSSCCFPPGRNSLDSSLHCSTG*KSSSPG Trigger: CCCGGGGCTGGAGGACTTCCAGCCTGTGGAACAGTG...CAGGGAGCTGTCCAGTGAGTTCCTGCCTGGAGGGAAGCAGCAAGAACTGGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGCATCAGGTCTGACGGAGGGGGCTGAGCAGAGAAGCAGGCTGCCAGGGGCCTCCTGGGAAGGGGAATaGCCAACCCTCCAAGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: KASGLTEGAEQRSRLPGASWEGE*PTLQVR Trigger: TCTGACTTGGAGGGTTGGGCATTCCCCTTCCCAGGA...GGCCCCTGGCAGCCTGCTTCTCTGCTCAGCCCCCTCCGTCAGACCTGATGCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCCCGCTCAGGGCTGTAGTCCAGATTGCACTGTTCCACAGGCTGGAAGTCCTGAGACCCTGGAAGCCTaGCATCTTCAGCTTCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: SPAQGCSPDCTVPQAGSPETLEA*HLQLLL Trigger: AAGCAGAAGCTGAAGATGGCAGGCTTCCAGGGTCTC...AGGACTTCCAGCCTGTGGAACAGTGCAATCTGGACTACAGCCCTGAGCGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125923.2 ENSMUST00000143229.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGAGGCAGGAGGATGGGGAGTTCCAGGCCAGTCTAGCCCATGTGAGGCCTAAAGTCATCCTTGGCTaGAAACAGAGTCTGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: RLRQEDGEFQASLAHVRPKVILG*KQSLRP Trigger: TGGCCTCAGACTCTGTTTCCAGCCAAGGATGACTTT...AGGCCTCACATGGGCTAGACTGGCCTGGAACTCCCCATCCTCCTGCCTCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGGCCCAGCAGAACCAGCTCCGGGCAGGACATACGATGCTCATGACGTCATATGATGGTGCACGCTaGCAATCCCAGCATTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: AQAQQNQLRAGHTMLMTSYDGAR*QSQHSR Trigger: TCTTGAATGCTGGGATTGCCAGCGTGCACCATCATA...TGACGTCATGAGCATCGTATGTCCTGCCCGGAGCTGGTTCTGCTGGGCCTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| 3UTR-3UTR CCA 90 bp | GGCCCAGCAGAACCAGCTCCGGGCAGGACATACGATGCTCATGACGTCAAGGGTAAAGTCATCCTTGGCTaGAAACAGAGTCTGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: GPAEPAPGRTYDAHDVKGKVILG*KQSLRP Trigger: TGGCCTCAGACTCTGTTTCCAGCCAAGGATGACTTT...ACCCTTGACGTCATGAGCATCGTATGTCCTGCCCGGAGCTGGTTCTGCTGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| 3UTR-3UTR GCA 90 bp | CAGGAGGATCCGGAGTTCAAAGTCATCCTTGGCTGGAAACAGAGTCTGAGGCCACTCCTCCGATGGTTGTaGTGGAGCCAAGCTTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: QEDPEFKVILGWKQSLRPLLRWL*WSQAFG Trigger: GCCAAAAGCTTGGCTCCAGCACAACCATCGGAGGAG...TGGCCTCAGACTCTGTTTCCAGCCAAGGATGACTTTGAACTCCGGATCCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| 3UTR-3UTR GCA 90 bp | CATATGATGGTGCACGCTGGCAATCCCAGCATTCAAGAGGTAGAGGCAGGAGGACTCCTCCGATGGTTGTaGTGGAGCCAAGCTTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: HMMVHAGNPSIQEVEAGGLLRWL*WSQAFG Trigger: GCCAAAAGCTTGGCTCCAGCACAACCATCGGAGGAG...TCCTCCTGCCTCTACCTCTTGAATGCTGGGATTGCCAGCGTGCACCATCATATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| 3UTR-3UTR CCA 90 bp | CATATGACACTCAGTGAGCTGAGGAATGGCCGCAGCCCAGGCCCAGCAGAACCATATGATGGTGCACGCTaGCAATCCCAGCATTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: HMTLSELRNGRSPGPAEPYDGAR*QSQHSR Trigger: TCTTGAATGCTGGGATTGCCAGCGTGCACCATCATA...TGGTTCTGCTGGGCCTGGGCTGCGGCCATTCCTCAGCTCACTGAGTGTCATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| 3UTR-3UTR CCA 90 bp | CATATGACACTCAGTGAGCTGAGGAATGGCCGCAGCCCAGGCCCAGCAGAACCAAATCAAGCCAGAGCTTaGGAAGAGGAGGTAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: HMTLSELRNGRSPGPAEPNQARA*EEEVEK Trigger: CTTTTCTACCTCCTCTTCCCAAGCTCTGGCTTGATT...TGGTTCTGCTGGGCCTGGGCTGCGGCCATTCCTCAGCTCACTGAGTGTCATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| 3UTR-3UTR CCA 90 bp | CATATGACACTCAGTGAGCTGAGGAATGGCCGCAGCCCAGGCCCAGCAGAACCAGTTCAAAGTCATCCTTaGCTGGAAACAGAGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: HMTLSELRNGRSPGPAEPVQSHP*LETESE Trigger: CTCAGACTCTGTTTCCAGCCAAGGATGACTTTGAAC...TGGTTCTGCTGGGCCTGGGCTGCGGCCATTCCTCAGCTCACTGAGTGTCATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGCAGGAGGATCCGGAGTTCAAAGTCATCCTTGGCTGGAAACAGAGTCTGAGAATCAAGCCAGAGCTTaGGAAGAGGAGGTAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: EAGGSGVQSHPWLETESENQARA*EEEVEK Trigger: CTTTTCTACCTCCTCTTCCCAAGCTCTGGCTTGATT...CTCAGACTCTGTTTCCAGCCAAGGATGACTTTGAACTCCGGATCCTCCTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| 3UTR TCA 72 bp | CTGGAGACATGGACACCACTGTGGCTGACAGGAGGTTaGGGCTCACCAGCCGCTCGCCCCACAGCCAGGCGT | + |
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Preference number: 3 (lower is better) Translates to: LETWTPLWLTGG*GSPAARPTARR Trigger: ACGCCTGGCTGTGGGGCGAGCGGCTGGTGAGCCTCAACCTCCTGTCAGCCACAGTGGTGTCCATGTCTCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125923.2 ENSMUST00000143229.2 |
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| 3UTR GCA 72 bp | CGATGGCGGAGCCCCGCTCAGGGCTGTAGTCCAGATTaGACTGTTCCACAGGCTGGAAGTCCTCCAGCCCCG | + |
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Preference number: 3 (lower is better) Translates to: RWRSPAQGCSPD*TVPQAGSPPAP Trigger: CGGGGCTGGAGGACTTCCAGCCTGTGGAACAGTGCAATCTGGACTACAGCCCTGAGCGGGGCTCCGCCATCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000125923.2 ENSMUST00000143229.2 |
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| 3UTR GCA 72 bp | TTGATGTGTCTGCGGTGGATGGCGTGTGTCCACTGGTaGCTCGCGGCCCCTGTAAGCACCAGCAAGGAGCGG | + |
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Preference number: 3 (lower is better) Translates to: LMCLRWMACVHW*LAAPVSTSKER Trigger: CCGCTCCTTGCTGGTGCTTACAGGGGCCGCGAGGCACCAGTGGACACACGCCATCCACCGCAGACACATCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR CCA 72 bp | GCCTTGATGTGTCTGCGGTGGATGGCGTGTGTCCACTaGTGCCTCGCGGCCCCTGTAAGCACCAGCAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: ALMCLRWMACVH*CLAAPVSTSKE Trigger: CTCCTTGCTGGTGCTTACAGGGGCCGCGAGGCACCAGTGGACACACGCCATCCACCGCAGACACATCAAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR CCA 72 bp | CTCCCCTGGAACGAGAGTGCAGCCTGCAGCAGTTCTTaGCCCAGTTCTTGCTGCTTCCCTCCAGGCAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: LPWNESAACSSS*PSSCCFPPGRN Trigger: GTTCCTGCCTGGAGGGAAGCAGCAAGAACTGGGCCAAGAACTGCTGCAGGCTGCACTCTCGTTCCAGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR GCA 72 bp | GAGAGTGCAGCCTGCAGCAGTTCTTGGCCCAGTTCTTaGTGCTTCCCTCCAGGCAGGAACTCACTGGACAGC | + |
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Preference number: 3 (lower is better) Translates to: ESAACSSSWPSS*CFPPGRNSLDS Trigger: GCTGTCCAGTGAGTTCCTGCCTGGAGGGAAGCAGCAAGAACTGGGCCAAGAACTGCTGCAGGCTGCACTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR GCA 72 bp | TGGGAAGCATCACACCGGTCTCCCCTGGAACGAGAGTaGAGCCTGCAGCAGTTCTTGGCCCAGTTCTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: WEASHRSPLERE*SLQQFLAQFLL Trigger: CAGCAAGAACTGGGCCAAGAACTGCTGCAGGCTGCACTCTCGTTCCAGGGGAGACCGGTGTGATGCTTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR TCA 72 bp | TTTAGGGCCATAGTCCTGCTTCTTCCTCCCAGACTGTaGGAGCTTCCAGGGGTCGCAGTCCATCAGACGCAC | + |
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Preference number: 3 (lower is better) Translates to: FRAIVLLLPPRL*ELPGVAVHQTH Trigger: GTGCGTCTGATGGACTGCGACCCCTGGAAGCTCTCACAGTCTGGGAGGAAGAAGCAGGACTATGGCCCTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR CCA 72 bp | GTAGAGGCAGGAGGATCCGGAGTTCAAAGTCATCCTTaGCTGGAAACAGAGTCTGAGGCCAGTCTAGGCCGG | + |
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Preference number: 3 (lower is better) Translates to: VEAGGSGVQSHP*LETESEASLGR Trigger: CCGGCCTAGACTGGCCTCAGACTCTGTTTCCAGCCAAGGATGACTTTGAACTCCGGATCCTCCTGCCTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| 3UTR CCA 72 bp | CTCTGGGGTCACAAAGTCCTGTATCAGTGTCACTCCTaGGAAGGGGAATGCCCAACCCTCCAAGTCAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: LWGHKVLYQCHS*EGECPTLQVRA Trigger: GGCTCTGACTTGGAGGGTTGGGCATTCCCCTTCCCAGGAGTGACACTGATACAGGACTTTGTGACCCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR TCA 72 bp | CGGAGTTCAAAGTCATCCTTGGCTGGAAACAGAGTCTaGGGCCAGTCTAGGCCGGAGACCCTGTCCCAAAAA | + |
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Preference number: 3 (lower is better) Translates to: RSSKSSLAGNRV*GQSRPETLSQK Trigger: TTTTTGGGACAGGGTCTCCGGCCTAGACTGGCCTCAGACTCTGTTTCCAGCCAAGGATGACTTTGAACTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| 3UTR CCA 72 bp | GCAGTCCATCAGACGCACCATCTCAGCTTCTTCCTCTaGGGTCACAAAGTCCTGTATCAGTGTCACTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: AVHQTHHLSFFL*GHKVLYQCHSW Trigger: CCAGGAGTGACACTGATACAGGACTTTGTGACCCCAGAGGAAGAAGCTGAGATGGTGCGTCTGATGGACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| 3UTR TCA 72 bp | GCTTGCTGCCATCCCAGCACAGACAAAAATTGCATATaGTGGTGCACGCTGGCAATCCCAGCATTCAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: ACCHPSTDKNCI*WCTLAIPAFKR Trigger: CCTCTTGAATGCTGGGATTGCCAGCGTGCACCATCATATGCAATTTTTGTCTGTGCTGGGATGGCAGCAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| 3UTR CCA 72 bp | CCAGCACAGACAAAAATTGCATATGATGGTGCACGCTaGCAATCCCAGCATTCAAGAGGTAGAGGCAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: PAQTKIAYDGAR*QSQHSRGRGRR Trigger: CCTCCTGCCTCTACCTCTTGAATGCTGGGATTGCCAGCGTGCACCATCATATGCAATTTTTGTCTGTGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| 3UTR GCA 72 bp | TACCTTCTGGCTAAAGCCAGGGAGACCCTGGAAGCCTaGCATCTTCAGCTTCTGCTTCCGAAAATTAACTTT | + |
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Preference number: 3 (lower is better) Translates to: YLLAKARETLEA*HLQLLLPKINF Trigger: AAAGTTAATTTTCGGAAGCAGAAGCTGAAGATGGCAGGCTTCCAGGGTCTCCCTGGCTTTAGCCAGAAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| CDS-3UTR TCA 90 bp | CACCAGCCGCTCGCCCCACAGCCAGGCGTCGTCCAAGTGGGGGTCGATGGCGGATTCCTAGTCCGTACCTaGAGGCAGATCTGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: HQPLAPQPGVVQVGVDGGFLVRT*RQICQG Trigger: GCCCTGGCAGATCTGCCTTCAGGTACGGACTAGGAA...TCCGCCATCGACCCCCACTTGGACGACGCCTGGCTGTGGGGCGAGCGGCTGGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| CDS-3UTR CCA 90 bp | GCCCAGGCCCAGCAGAACCAGCTCCGGGCAGGACATACGATGCTCATGACGTCACCAAGTGGGGGTCGATaGCGGAGCCCCGCTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: AQAQQNQLRAGHTMLMTSPSGGR*RSPAQG Trigger: GCCCTGAGCGGGGCTCCGCCATCGACCCCCACTTGG...TGACGTCATGAGCATCGTATGTCCTGCCCGGAGCTGGTTCTGCTGGGCCTGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR GCA 90 bp | GGCCCAGCAGAACCAGCTCCGGGCAGGACATACGATGCTCATGACGTCAAGGGTAGAGCCCTCGGCCCCTaGGGCCCAGCCTGTGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GPAEPAPGRTYDAHDVKGRALGP*GPACVW Trigger: CCAGACACAGGCTGGGCCGCAGGGGCCGAGGGCTCT...ACCCTTGACGTCATGAGCATCGTATGTCCTGCCCGGAGCTGGTTCTGCTGGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041100.4 |
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| CDS-3UTR GCA 90 bp | CCAGATTGCACTGTTCCACAGGCTGGAAGTCCTCCAGCCCCGGGTAAAGGCCCAAGAGCCCTCGGCCCCTaGGGCCCAGCCTGTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PDCTVPQAGSPPAPGKGPRALGP*GPACVW Trigger: CCAGACACAGGCTGGGCCGCAGGGGCCGAGGGCTCT...TGGGCCTTTACCCGGGGCTGGAGGACTTCCAGCCTGTGGAACAGTGCAATCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143229.2 |
||
| CDS-3UTR CCA 90 bp | AGGCGTCGTCCAAGTGGGGGTCGATGGCGGAGCCCCGCTCAGGGCTGTAGTCCACAGGGCGGGTCCCTGTaGCGTTGTCTCTCGCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: RRRPSGGRWRSPAQGCSPQGGSL*RCLSQI Trigger: TATCTGCGAGAGACAACGCCACAGGGACCCGCCCTG...TGGACTACAGCCCTGAGCGGGGCTCCGCCATCGACCCCCACTTGGACGACGCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000125923.2 ENSMUST00000143229.2 |
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| CDS-3UTR CCA 90 bp | GGCCCAGCAGAACCAGCTCCGGGCAGGACATACGATGCTCATGACGTCAAGGGTCCAAGTGGGGGTCGATaGCGGAGCCCCGCTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GPAEPAPGRTYDAHDVKGPSGGR*RSPAQG Trigger: GCCCTGAGCGGGGCTCCGCCATCGACCCCCACTTGG...ACCCTTGACGTCATGAGCATCGTATGTCCTGCCCGGAGCTGGTTCTGCTGGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
||
| 3UTR CAA 72 bp | TCTGGAGACATGGACACCACTGTGGCTGACAGGAGGTaGAGGCTCACCAGCCGCTCGCCCCACAGCCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SGDMDTTVADRR*RLTSRSPHSQA Trigger: CGCCTGGCTGTGGGGCGAGCGGCTGGTGAGCCTCAACCTCCTGTCAGCCACAGTGGTGTCCATGTCTCCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125923.2 ENSMUST00000143229.2 |
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| 3UTR CAA 72 bp | GACAGCTCCCTGAAGGTGGCGCACACACGGCGGGCCTaGATGTGTCTGCGGTGGATGGCGTGTGTCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSSLKVAHTRRA*MCLRWMACVHW Trigger: CCAGTGGACACACGCCATCCACCGCAGACACATCAAGGCCCGCCGTGTGTGCGCCACCTTCAGGGAGCTGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
||
| CDS-3UTR TCA 90 bp | CGTCCAAGTGGGGGTCGATGGCGGAGCCCCGCTCAGGGCTGTAGTCCAGATTGCCTTCCTCCCAGACTGTaGGAGCTTCCAGGGGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPSGGRWRSPAQGCSPDCLPPRL*ELPGVA Trigger: TGCGACCCCTGGAAGCTCTCACAGTCTGGGAGGAAG...GCAATCTGGACTACAGCCCTGAGCGGGGCTCCGCCATCGACCCCCACTTGGACG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000143229.2 |
||
| CDS-3UTR CCA 90 bp | GCCCAGCAGAACCAGCTCCGGGCAGGACATACGATGCTCATGACGTCAAGGGTCCAGGCGTCGTCCAAGTaGGGGTCGATGGCGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AQQNQLRAGHTMLMTSRVQASSK*GSMAEP Trigger: GGGCTCCGCCATCGACCCCCACTTGGACGACGCCTG...GACCCTTGACGTCATGAGCATCGTATGTCCTGCCCGGAGCTGGTTCTGCTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
||
| CDS-3UTR TCA 90 bp | TGCTGGAGCCAAGCTTTTGGCCAGGCCAGTGACAGCTCCTGGGCCCTGGGAAGCCTTCCTCCCAGACTGTaGGAGCTTCCAGGGGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: CWSQAFGQASDSSWALGSLPPRL*ELPGVA Trigger: TGCGACCCCTGGAAGCTCTCACAGTCTGGGAGGAAG...GCTTCCCAGGGCCCAGGAGCTGTCACTGGCCTGGCCAAAAGCTTGGCTCCAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
||
| CDS-3UTR CCA 90 bp | TGCTGGAGCCAAGCTTTTGGCCAGGCCAGTGACAGCTCCTGGGCCCTGGGAAGCTGTGTCTGCGGTGGATaGCGTGTGTCCACTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CWSQAFGQASDSSWALGSCVCGG*RVSTGA Trigger: GGCACCAGTGGACACACGCCATCCACCGCAGACACA...GCTTCCCAGGGCCCAGGAGCTGTCACTGGCCTGGCCAAAAGCTTGGCTCCAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
||
| CDS-3UTR TCA 90 bp | CATATGACACTCAGTGAGCTGAGGAATGGCCGCAGCCCAGGCCCAGCAGAACCATGGCTGACAGGAGGTTaGGGCTCACCAGCCGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: HMTLSELRNGRSPGPAEPWLTGG*GSPAAR Trigger: GCGAGCGGCTGGTGAGCCTCAACCTCCTGTCAGCCA...TGGTTCTGCTGGGCCTGGGCTGCGGCCATTCCTCAGCTCACTGAGTGTCATATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
||
| CDS-3UTR TCA 90 bp | AGGCTGAGGCAGGAGGATGGGGAGTTCCAGGCCAGTCTAGCCCATGTGAGGCCTGGACACCACTGTGGCTaGCAGGAGGTTGAGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLRQEDGEFQASLAHVRPGHHCG*QEVEAH Trigger: GTGAGCCTCAACCTCCTGTCAGCCACAGTGGTGTCC...AGGCCTCACATGGGCTAGACTGGCCTGGAACTCCCCATCCTCCTGCCTCAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR CCA 90 bp | GGCCCAGCAGAACCAGCTCCGGGCAGGACATACGATGCTCATGACGTCAAGGGTGCCACCTCCACCTCCTaGCAGGGGACAGACCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GPAEPAPGRTYDAHDVKGATSTS*QGTDLL Trigger: TAGCAGGTCTGTCCCCTGCCAGGAGGTGGAGGTGGC...ACCCTTGACGTCATGAGCATCGTATGTCCTGCCCGGAGCTGGTTCTGCTGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
||
| CDS-3UTR CCA 90 bp | GAGGCTCACCAGCCGCTCGCCCCACAGCCAGGCGTCGTCCAAGTGGGGGTCGATCTCAGCTTCTTCCTCTaGGGTCACAAAGTCCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: EAHQPLAPQPGVVQVGVDLSFFL*GHKVLY Trigger: ATACAGGACTTTGTGACCCCAGAGGAAGAAGCTGAG...ATCGACCCCCACTTGGACGACGCCTGGCTGTGGGGCGAGCGGCTGGTGAGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143229.2 |
||
| CDS-3UTR CCA 90 bp | CCTTGGCTGGAAACAGAGTCTGAGGCCAGTCTAGGCCGGAGACCCTGTCCCAAAGCCACCTCCACCTCCTaGCAGGGGACAGACCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PWLETESEASLGRRPCPKATSTS*QGTDLL Trigger: TAGCAGGTCTGTCCCCTGCCAGGAGGTGGAGGTGGC...TTTGGGACAGGGTCTCCGGCCTAGACTGGCCTCAGACTCTGTTTCCAGCCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
||
| CDS-3UTR CCA 90 bp | CCTTGGCTGGAAACAGAGTCTGAGGCCAGTCTAGGCCGGAGACCCTGTCCCAAAATGGCGTGTGTCCACTaGTGCCTCGCGGCCCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PWLETESEASLGRRPCPKMACVH*CLAAPV Trigger: TACAGGGGCCGCGAGGCACCAGTGGACACACGCCAT...TTTGGGACAGGGTCTCCGGCCTAGACTGGCCTCAGACTCTGTTTCCAGCCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR TCA 90 bp | CCTTGGCTGGAAACAGAGTCTGAGGCCAGTCTAGGCCGGAGACCCTGTCCCAAAGGACACCACTGTGGCTaGCAGGAGGTTGAGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PWLETESEASLGRRPCPKGHHCG*QEVEAH Trigger: GTGAGCCTCAACCTCCTGTCAGCCACAGTGGTGTCC...TTTGGGACAGGGTCTCCGGCCTAGACTGGCCTCAGACTCTGTTTCCAGCCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
||
| CDS-3UTR CCA 90 bp | CCAGATTGCACTGTTCCACAGGCTGGAAGTCCTCCAGCCCCGGGTAAAGGCCCAGGCCCAGCCTGTGTCTaGGCAGTAGAGGAAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PDCTVPQAGSPPAPGKGPGPACV*AVEETA Trigger: TGCTGTTTCCTCTACTGCCCAGACACAGGCTGGGCC...TGGGCCTTTACCCGGGGCTGGAGGACTTCCAGCCTGTGGAACAGTGCAATCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143229.2 |
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| CDS-3UTR CCA 90 bp | GAGGCAGGAGGATCCGGAGTTCAAAGTCATCCTTGGCTGGAAACAGAGTCTGAGCAGGCGTCGTCCAAGTaGGGGTCGATGGCGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EAGGSGVQSHPWLETESEQASSK*GSMAEP Trigger: GGGCTCCGCCATCGACCCCCACTTGGACGACGCCTG...CTCAGACTCTGTTTCCAGCCAAGGATGACTTTGAACTCCGGATCCTCCTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR CCA 90 bp | CCTTGGCTGGAAACAGAGTCTGAGGCCAGTCTAGGCCGGAGACCCTGTCCCAAATGTGTCTGCGGTGGATaGCGTGTGTCCACTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PWLETESEASLGRRPCPKCVCGG*RVSTGA Trigger: GGCACCAGTGGACACACGCCATCCACCGCAGACACA...TTTGGGACAGGGTCTCCGGCCTAGACTGGCCTCAGACTCTGTTTCCAGCCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR CCA 90 bp | GCCCAGGCCCAGCAGAACCAGCTCCGGGCAGGACATACGATGCTCATGACGTCATTGATGTGTCTGCGGTaGATGGCGTGTGTCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: AQAQQNQLRAGHTMLMTSLMCLR*MACVHW Trigger: CCAGTGGACACACGCCATCCACCGCAGACACATCAA...TGACGTCATGAGCATCGTATGTCCTGCCCGGAGCTGGTTCTGCTGGGCCTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR TCA 90 bp | TATGATGGTGCACGCTGGCAATCCCAGCATTCAAGAGGTAGAGGCAGGAGGATCTGGCTGACAGGAGGTTaGGGCTCACCAGCCGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: YDGARWQSQHSRGRGRRIWLTGG*GSPAAR Trigger: GCGAGCGGCTGGTGAGCCTCAACCTCCTGTCAGCCA...GATCCTCCTGCCTCTACCTCTTGAATGCTGGGATTGCCAGCGTGCACCATCATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR GCA 90 bp | GCCCAGGCCCAGCAGAACCAGCTCCGGGCAGGACATACGATGCTCATGACGTCAGAGACCCTGGAAGCCTaGCATCTTCAGCTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AQAQQNQLRAGHTMLMTSETLEA*HLQLLL Trigger: AAGCAGAAGCTGAAGATGGCAGGCTTCCAGGGTCTC...TGACGTCATGAGCATCGTATGTCCTGCCCGGAGCTGGTTCTGCTGGGCCTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR GCA 90 bp | CCTTGGCTGGAAACAGAGTCTGAGGCCAGTCTAGGCCGGAGACCCTGTCCCAAATGGCCCAGTTCTTGCTaGTTCCCTCCAGGCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PWLETESEASLGRRPCPKWPSSC*FPPGRN Trigger: GTTCCTGCCTGGAGGGAAGCAGCAAGAACTGGGCCA...TTTGGGACAGGGTCTCCGGCCTAGACTGGCCTCAGACTCTGTTTCCAGCCAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR GCA 90 bp | CCTTGGCTGGAAACAGAGTCTGAGGCCAGTCTAGGCCGGAGACCCTGTCCCAAATCTTGGCCCAGTTCTTaGTGCTTCCCTCCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PWLETESEASLGRRPCPKSWPSS*CFPPGR Trigger: CCTGCCTGGAGGGAAGCAGCAAGAACTGGGCCAAGA...TTTGGGACAGGGTCTCCGGCCTAGACTGGCCTCAGACTCTGTTTCCAGCCAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR CCA 90 bp | CCAGGCCCAGCAGAACCAGCTCCGGGCAGGACATACGATGCTCATGACGTCAAGCTCTGGACTACCTTCTaGCTAAAGCCAGGGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: PGPAEPAPGRTYDAHDVKLWTTF*LKPGRP Trigger: GGGTCTCCCTGGCTTTAGCCAGAAGGTAGTCCAGAG...CTTGACGTCATGAGCATCGTATGTCCTGCCCGGAGCTGGTTCTGCTGGGCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR CCA 90 bp | GCAGGAGGATCCGGAGTTCAAAGTCATCCTTGGCTGGAAACAGAGTCTGAGGCCCACTGTTCCACAGGCTaGAAGTCCTCCAGCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGGSGVQSHPWLETESEAHCSTG*KSSSPG Trigger: CCCGGGGCTGGAGGACTTCCAGCCTGTGGAACAGTG...GGCCTCAGACTCTGTTTCCAGCCAAGGATGACTTTGAACTCCGGATCCTCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR TCA 90 bp | TATGATGGTGCACGCTGGCAATCCCAGCATTCAAGAGGTAGAGGCAGGAGGATCACACACGGCGGGCCTTaGTGTGTCTGCGGTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: YDGARWQSQHSRGRGRRITHGGP*CVCGGW Trigger: CCATCCACCGCAGACACATCAAGGCCCGCCGTGTGT...GATCCTCCTGCCTCTACCTCTTGAATGCTGGGATTGCCAGCGTGCACCATCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR GCA 90 bp | CCTTGGCTGGAAACAGAGTCTGAGGCCAGTCTAGGCCGGAGACCCTGTCCCAAATCCTGGGAAGGGGAATaGCCAACCCTCCAAGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PWLETESEASLGRRPCPKSWEGE*PTLQVR Trigger: TCTGACTTGGAGGGTTGGGCATTCCCCTTCCCAGGA...TTTGGGACAGGGTCTCCGGCCTAGACTGGCCTCAGACTCTGTTTCCAGCCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041100.4 |
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| CDS-3UTR TCA 90 bp | GAGGCAGGAGGATCCGGAGTTCAAAGTCATCCTTGGCTGGAAACAGAGTCTGAGCTTCCTCCCAGACTGTaGGAGCTTCCAGGGGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: EAGGSGVQSHPWLETESELPPRL*ELPGVA Trigger: TGCGACCCCTGGAAGCTCTCACAGTCTGGGAGGAAG...CTCAGACTCTGTTTCCAGCCAAGGATGACTTTGAACTCCGGATCCTCCTGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR GCA 90 bp | GCAGGAGGATCCGGAGTTCAAAGTCATCCTTGGCTGGAAACAGAGTCTGAGGCCTCTTGGCCCAGTTCTTaGTGCTTCCCTCCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGGSGVQSHPWLETESEASWPSS*CFPPGR Trigger: CCTGCCTGGAGGGAAGCAGCAAGAACTGGGCCAAGA...GGCCTCAGACTCTGTTTCCAGCCAAGGATGACTTTGAACTCCGGATCCTCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR CCA 90 bp | GAGGCAGGAGGATCCGGAGTTCAAAGTCATCCTTGGCTGGAAACAGAGTCTGAGCAGGGCGGGTCCCTGTaGCGTTGTCTCTCGCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: EAGGSGVQSHPWLETESEQGGSL*RCLSQI Trigger: TATCTGCGAGAGACAACGCCACAGGGACCCGCCCTG...CTCAGACTCTGTTTCCAGCCAAGGATGACTTTGAACTCCGGATCCTCCTGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041100.4 |
||
| CDS-3UTR CCA 90 bp | GTAGAGGCAGGAGGATCCGGAGTTCAAAGTCATCCTTGGCTGGAAACAGAGTCTATGGCGTGTGTCCACTaGTGCCTCGCGGCCCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VEAGGSGVQSHPWLETESMACVH*CLAAPV Trigger: TACAGGGGCCGCGAGGCACCAGTGGACACACGCCAT...AGACTCTGTTTCCAGCCAAGGATGACTTTGAACTCCGGATCCTCCTGCCTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR GCA 90 bp | CGGTCTCCCCTGGAACGAGAGTGCAGCCTGCAGCAGTTCTTGGCCCAGTTCTTGTTACAGCCGCACTCCTaGAAAAGAGAAACTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSPLERECSLQQFLAQFLLQPHS*KRETSA Trigger: GGCTGAAGTTTCTCTTTTGCAGGAGTGCGGCTGTAA...CAAGAACTGGGCCAAGAACTGCTGCAGGCTGCACTCTCGTTCCAGGGGAGACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| CDS-3UTR GCA 90 bp | CAGGAGGATCCGGAGTTCAAAGTCATCCTTGGCTGGAAACAGAGTCTGAGGCCATGGCCCAGTTCTTGCTaGTTCCCTCCAGGCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QEDPEFKVILGWKQSLRPWPSSC*FPPGRN Trigger: GTTCCTGCCTGGAGGGAAGCAGCAAGAACTGGGCCA...TGGCCTCAGACTCTGTTTCCAGCCAAGGATGACTTTGAACTCCGGATCCTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR CCA 90 bp | AAAGCCAGGGAGACCCTGGAAGCCTGCCATCTTCAGCTTCTGCTTCCGAAAATTCAGGGCGGGTCCCTGTaGCGTTGTCTCTCGCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: KARETLEACHLQLLLPKIQGGSL*RCLSQI Trigger: TATCTGCGAGAGACAACGCCACAGGGACCCGCCCTG...AATTTTCGGAAGCAGAAGCTGAAGATGGCAGGCTTCCAGGGTCTCCCTGGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125923.2 ENSMUST00000143229.2 |
||
| CDS-3UTR CCA 90 bp | CATATGATGGTGCACGCTGGCAATCCCAGCATTCAAGAGGTAGAGGCAGGAGGAGGCCCAGCCTGTGTCTaGGCAGTAGAGGAAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HMMVHAGNPSIQEVEAGGGPACV*AVEETA Trigger: TGCTGTTTCCTCTACTGCCCAGACACAGGCTGGGCC...TCCTCCTGCCTCTACCTCTTGAATGCTGGGATTGCCAGCGTGCACCATCATATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041100.4 |
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| CDS-3UTR CCA 90 bp | GCAGGAGGATCCGGAGTTCAAAGTCATCCTTGGCTGGAAACAGAGTCTGAGGCCCTCTGGACTACCTTCTaGCTAAAGCCAGGGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: AGGSGVQSHPWLETESEALWTTF*LKPGRP Trigger: GGGTCTCCCTGGCTTTAGCCAGAAGGTAGTCCAGAG...GGCCTCAGACTCTGTTTCCAGCCAAGGATGACTTTGAACTCCGGATCCTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
||
| CDS-3UTR GCA 90 bp | CATATGACACTCAGTGAGCTGAGGAATGGCCGCAGCCCAGGCCCAGCAGAACCATTACAGCCGCACTCCTaGAAAAGAGAAACTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HMTLSELRNGRSPGPAEPLQPHS*KRETSA Trigger: GGCTGAAGTTTCTCTTTTGCAGGAGTGCGGCTGTAA...TGGTTCTGCTGGGCCTGGGCTGCGGCCATTCCTCAGCTCACTGAGTGTCATATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041100.4 |
||
| CDS-3UTR CCA 90 bp | CATATGACACTCAGTGAGCTGAGGAATGGCCGCAGCCCAGGCCCAGCAGAACCACTCAGCTTCTTCCTCTaGGGTCACAAAGTCCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HMTLSELRNGRSPGPAEPLSFFL*GHKVLY Trigger: ATACAGGACTTTGTGACCCCAGAGGAAGAAGCTGAG...TGGTTCTGCTGGGCCTGGGCTGCGGCCATTCCTCAGCTCACTGAGTGTCATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041100.4 |
||
| CDS-3UTR CCA 90 bp | CATATGATGGTGCACGCTGGCAATCCCAGCATTCAAGAGGTAGAGGCAGGAGGATTGATGTGTCTGCGGTaGATGGCGTGTGTCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HMMVHAGNPSIQEVEAGGLMCLR*MACVHW Trigger: CCAGTGGACACACGCCATCCACCGCAGACACATCAA...TCCTCCTGCCTCTACCTCTTGAATGCTGGGATTGCCAGCGTGCACCATCATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
||
| CDS-3UTR CCA 90 bp | CATATGATGGTGCACGCTGGCAATCCCAGCATTCAAGAGGTAGAGGCAGGAGGAGCCTGCAGCAGTTCTTaGCCCAGTTCTTGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HMMVHAGNPSIQEVEAGGACSSS*PSSCCF Trigger: GAAGCAGCAAGAACTGGGCCAAGAACTGCTGCAGGC...TCCTCCTGCCTCTACCTCTTGAATGCTGGGATTGCCAGCGTGCACCATCATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
||
| CDS-3UTR CCA 90 bp | TATGATGGTGCACGCTGGCAATCCCAGCATTCAAGAGGTAGAGGCAGGAGGATCGCCTGCAGCAGTTCTTaGCCCAGTTCTTGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YDGARWQSQHSRGRGRRIACSSS*PSSCCF Trigger: GAAGCAGCAAGAACTGGGCCAAGAACTGCTGCAGGC...GATCCTCCTGCCTCTACCTCTTGAATGCTGGGATTGCCAGCGTGCACCATCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
||
| CDS-3UTR GCA 90 bp | CAGGAGGATCCGGAGTTCAAAGTCATCCTTGGCTGGAAACAGAGTCTGAGGCCAGAGACCCTGGAAGCCTaGCATCTTCAGCTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QEDPEFKVILGWKQSLRPETLEA*HLQLLL Trigger: AAGCAGAAGCTGAAGATGGCAGGCTTCCAGGGTCTC...TGGCCTCAGACTCTGTTTCCAGCCAAGGATGACTTTGAACTCCGGATCCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
||
| CDS-3UTR CCA 90 bp | CTGGAAGCCTGCCATCTTCAGCTTCTGCTTCCGAAAATTAACTTTAGGGCCATACGAGGCTTTGGTCCTTaGCTGTTTTACAGGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LEACHLQLLLPKINFRAIRGFGP*LFYRQA Trigger: AGCTTGCCTGTAAAACAGCCAAGGACCAAAGCCTCG...TATGGCCCTAAAGTTAATTTTCGGAAGCAGAAGCTGAAGATGGCAGGCTTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTGAGGCAGGAGGATGGGGAGTTCCAGGCCAGTCTAGCCCATGTGAGGCCTGTGGCTGACAGGAGGTaGAGGCTCACCAGCCGCTCG | + |
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Preference number: 5 (lower is better) Translates to: RLRQEDGEFQASLAHVRPVADRR*RLTSRS Trigger: CGAGCGGCTGGTGAGCCTCAACCTCCTGTCAGCCAC...AGGCCTCACATGGGCTAGACTGGCCTGGAACTCCCCATCCTCCTGCCTCAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR CAA 90 bp | CCAGGCCCAGCAGAACCAGCTCCGGGCAGGACATACGATGCTCATGACGTCAAGGTGGCTGACAGGAGGTaGAGGCTCACCAGCCGCTCG | + |
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Preference number: 5 (lower is better) Translates to: PGPAEPAPGRTYDAHDVKVADRR*RLTSRS Trigger: CGAGCGGCTGGTGAGCCTCAACCTCCTGTCAGCCAC...CTTGACGTCATGAGCATCGTATGTCCTGCCCGGAGCTGGTTCTGCTGGGCCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR CAA 90 bp | CCTTGGCTGGAAACAGAGTCTGAGGCCAGTCTAGGCCGGAGACCCTGTCCCAAACACACACGGCGGGCCTaGATGTGTCTGCGGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: PWLETESEASLGRRPCPKHTRRA*MCLRWM Trigger: CATCCACCGCAGACACATCAAGGCCCGCCGTGTGTG...TTTGGGACAGGGTCTCCGGCCTAGACTGGCCTCAGACTCTGTTTCCAGCCAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR CAA 90 bp | CATATGATGGTGCACGCTGGCAATCCCAGCATTCAAGAGGTAGAGGCAGGAGGACACACACGGCGGGCCTaGATGTGTCTGCGGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: HMMVHAGNPSIQEVEAGGHTRRA*MCLRWM Trigger: CATCCACCGCAGACACATCAAGGCCCGCCGTGTGTG...TCCTCCTGCCTCTACCTCTTGAATGCTGGGATTGCCAGCGTGCACCATCATATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS-3UTR CAA 90 bp | GCAGGAGGATCCGGAGTTCAAAGTCATCCTTGGCTGGAAACAGAGTCTGAGGCCTTCTTGGCCCAGTTCTaGCTGCTTCCCTCCAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: AGGSGVQSHPWLETESEAFLAQF*LLPSRQ Trigger: CTGCCTGGAGGGAAGCAGCAAGAACTGGGCCAAGAA...GGCCTCAGACTCTGTTTCCAGCCAAGGATGACTTTGAACTCCGGATCCTCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041100.4 ENSMUST00000100568.3 |
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| CDS GCA 72 bp | GGCCATAGTCCTCGGCTCAGCTCAGGCCACCGTACCTaGTTCTTCCTCCCAGACTGTGAGAGCTTCCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: GHSPRLSSGHRT*FFLPDCESFQG Trigger: CCCCTGGAAGCTCTCACAGTCTGGGAGGAAGAAGCAGGTACGGTGGCCTGAGCTGAGCCGAGGACTATGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143229.2 |
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| CDS CAA 90 bp | AGTCCGTACCTGAAGGCAGATCTGCCAGGGCGGGTCCCTGTGGCGTaGTCTCTCGCAGATAAGACAGGTCCGGATGCCCTTACAGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: SPYLKADLPGRVPVA*SLADKTGPDALTAA Trigger: TGCGGCTGTAAGGGCATCCGGACCTGTCTTATCTGCGAGAGACAACGCCACAGGGACCCGCCCTGGCAGATCTGCCTTCAGGTACGGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125923.2 |
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| CDS CAA 72 bp | CTGAAGGCAGATCTGCCAGGGCGGGTCCCTGTGGCGTaGTCTCTCGCAGATAAGACAGGTCCGGATGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: LKADLPGRVPVA*SLADKTGPDAL Trigger: AAGGGCATCCGGACCTGTCTTATCTGCGAGAGACAACGCCACAGGGACCCGCCCTGGCAGATCTGCCTTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041100.4 ENSMUST00000125923.2 ENSMUST00000143229.2 |
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