Pregenerated sensors for ALKBH3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040174Ensembl transcript IDs: ENSMUST00000040005.13, ENSMUST00000111240.8, ENSMUST00000126378.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GATAACCTTGATTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGAGTGCTTGCGGGAGATaGGGAGGGGCTGTTAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: DNLDLEICLKVSVPVVDMSACGR*GGAVRC Trigger: GCACCTAACAGCCCCTCCCCATCTCCCGCAAGCACT...CATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAATCAAGGTTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| 3UTR CCA 72 bp | TCTGAACAGCCACATCACGGAAGTGCTTGCGGGAGATaGGGAGGGGCTGTTAGGTGCATAGCCCTCCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SEQPHHGSACGR*GGAVRCIALPS Trigger: TGAGGGGAGGGCTATGCACCTAACAGCCCCTCCCCATCTCCCGCAAGCACTTCCGTGATGTGGCTGTTCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGCAGCTCTCATTCAGGAGGAGTAGAACCTGAGAAGCAAACACCACGCTTTACATCACGGAAGTGCTaGCGGGAGATGGGGAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: AGSSHSGGVEPEKQTPRFTSRKC*REMGRG Trigger: GCCCCTCCCCATCTCCCGCAAGCACTTCCGTGATGT...AAAGCGTGGTGTTTGCTTCTCAGGTTCTACTCCTCCTGAATGAGAGCTGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| 3UTR-3UTR CAA 90 bp | AACCTTGATTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGTTGACATCACGGAAGTGCTaGCGGGAGATGGGGAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: NLDLEICLKVSVPVVDMLTSRKC*REMGRG Trigger: GCCCCTCCCCATCTCCCGCAAGCACTTCCGTGATGT...CAACATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAATCAAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| 3UTR TCA 72 bp | AAAGTAAGTGTTCCTGTAGTAGACATGTTGACAAGGTaGCGTGCTGGCAGCTCTCATTCAGGAGGAGTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KVSVPVVDMLTR*RAGSSHSGGVE Trigger: TTCTACTCCTCCTGAATGAGAGCTGCCAGCACGTCACCTTGTCAACATGTCTACTACAGGAACACTTACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR TCA 90 bp | AACAGCCACATCACGGAAGTGCTTGCGGGAGATGGGGAGGGGCTGTTAGGTGCAGCAGGGGAAGCTGGCTaGGTAGCAGACTGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NSHITEVLAGDGEGLLGAAGEAG*VADWLL Trigger: CAAGAGCCAGTCTGCTACTCAGCCAGCTTCCCCTGC...TGCACCTAACAGCCCCTCCCCATCTCCCGCAAGCACTTCCGTGATGTGGCTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040005.13 |
||
| CDS-3UTR CCA 90 bp | AACAGCCACATCACGGAAGTGCTTGCGGGAGATGGGGAGGGGCTGTTAGGTGCATGGAGTGGTATTCCTTaGGCACTCGGTGCTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSHITEVLAGDGEGLLGAWSGIP*ALGAAS Trigger: ACTGGCAGCACCGAGTGCCCAAGGAATACCACTCCA...TGCACCTAACAGCCCCTCCCCATCTCCCGCAAGCACTTCCGTGATGTGGCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CCA 90 bp | CTGAACAGCCACATCACGGAAGTGCTTGCGGGAGATGGGGAGGGGCTGTTAGGTCTCGGTTGTCTGGAGTaGTATTCCTTGGGCACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LNSHITEVLAGDGEGLLGLGCLE*YSLGTR Trigger: CCGAGTGCCCAAGGAATACCACTCCAGACAACCGAG...ACCTAACAGCCCCTCCCCATCTCCCGCAAGCACTTCCGTGATGTGGCTGTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR TCA 90 bp | CTGAACAGCCACATCACGGAAGTGCTTGCGGGAGATGGGGAGGGGCTGTTAGGTTACACAGCAAGGAGTTaGAGGTGTGGCTGGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNSHITEVLAGDGEGLLGYTARS*RCGWCS Trigger: AGAACACCAGCCACACCTTCAACTCCTTGCTGTGTA...ACCTAACAGCCCCTCCCCATCTCCCGCAAGCACTTCCGTGATGTGGCTGTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR GCA 90 bp | AACAGCCACATCACGGAAGTGCTTGCGGGAGATGGGGAGGGGCTGTTAGGTGCATGGTGTTCTCTTCAATaGGGCTCTTCAGAGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: NSHITEVLAGDGEGLLGAWCSLQ*GSSEST Trigger: TGTGGACTCTGAAGAGCCGCATTGAAGAGAACACCA...TGCACCTAACAGCCCCTCCCCATCTCCCGCAAGCACTTCCGTGATGTGGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGTAAGTGTTCCTGTAGTAGACATGTTGACAAGGTGACGTGCTGGCAGCTCATTGCTGCTGTTCCTTaGTCCTCCAGGCTGGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QSKCSCSRHVDKVTCWQLIAAVP*SSRLAP Trigger: CGGGGCCAGCCTGGAGGAGCAAGGAACAGCAGCAAT...GAGCTGCCAGCACGTCACCTTGTCAACATGTCTACTACAGGAACACTTACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGCTCTCATTCAGGAGGAGTAGAACCTGAGAAGCAAACACCACGCTTTCTGGGTTCATCGTCGCTGTaGCAGTCCACACTGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSHSGGVEPEKQTPRFLGSSSL*QSTLSF Trigger: GAAGGACAGTGTGGACTGGCACAGCGACGATGAACC...CAGAAAGCGTGGTGTTTGCTTCTCAGGTTCTACTCCTCCTGAATGAGAGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGTAAGTGTTCCTGTAGTAGACATGTTGACAAGGTGACGTGCTGGCAGCTCCCCTGTCAATCACTCTaGGTTCTGGGGCTGCACGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSKCSCSRHVDKVTCWQLPCQSL*VLGLHG Trigger: TCCGTGCAGCCCCAGAACCCAGAGTGATTGACAGGG...GAGCTGCCAGCACGTCACCTTGTCAACATGTCTACTACAGGAACACTTACTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGCTCTCATTCAGGAGGAGTAGAACCTGAGAAGCAAACACCACGCTTTCTGGGCTCCTCTTGGGTCTaGATAAACGGTCCGAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSHSGGVEPEKQTPRFLGSSWV*INGPKG Trigger: ACCTTTCGGACCGTTTATCCAGACCCAAGAGGAGCC...CAGAAAGCGTGGTGTTTGCTTCTCAGGTTCTACTCCTCCTGAATGAGAGCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGCAGCTCTCATTCAGGAGGAGTAGAACCTGAGAAGCAAACACCACGCTTTTACACAGCAAGGAGTTaGAGGTGTGGCTGGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGSSHSGGVEPEKQTPRFYTARS*RCGWCS Trigger: AGAACACCAGCCACACCTTCAACTCCTTGCTGTGTA...AAAGCGTGGTGTTTGCTTCTCAGGTTCTACTCCTCCTGAATGAGAGCTGCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCAGGAGGCAAAAAGCTTTTGGATCAAATCATCTGTGAGTACAGCCAGACCCTGTCAATCACTCTaGGTTCTGGGGCTGCACGGA | + |
|
Preference number: 4 (lower is better) Translates to: AEQEAKSFWIKSSVSTARPCQSL*VLGLHG Trigger: TCCGTGCAGCCCCAGAACCCAGAGTGATTGACAGGG...TCTGGCTGTACTCACAGATGATTTGATCCAAAAGCTTTTTGCCTCCTGCTCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111240.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCAGCTCTCATTCAGGAGGAGTAGAACCTGAGAAGCAAACACCACGCTTTGGTCCCGTGATCCAATaGTATCTTCACTCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGSSHSGGVEPEKQTPRFGPVIQ*YLHSLH Trigger: GTGGAGAGAGTGAAGATACCATTGGATCACGGGACC...AAAGCGTGGTGTTTGCTTCTCAGGTTCTACTCCTCCTGAATGAGAGCTGCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGTAAGTGTTCCTGTAGTAGACATGTTGACAAGGTGACGTGCTGGCAGCTCTGTCGGTCACATTGCTaGTGTTCCTTGCTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSKCSCSRHVDKVTCWQLCRSHC*CSLLLQ Trigger: CTGGAGGAGCAAGGAACAGCAGCAATGTGACCGACA...GAGCTGCCAGCACGTCACCTTGTCAACATGTCTACTACAGGAACACTTACTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGCTCTCATTCAGGAGGAGTAGAACCTGAGAAGCAAACACCACGCTTTCTGAAGCTCTCCATACCATaGTGTAAGTCTTGGTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GSSHSGGVEPEKQTPRFLKLSIP*CKSWLR Trigger: CCGCAACCAAGACTTACAGCATGGTATGGAGAGCTT...CAGAAAGCGTGGTGTTTGCTTCTCAGGTTCTACTCCTCCTGAATGAGAGCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGCTCTCATTCAGGAGGAGTAGAACCTGAGAAGCAAACACCACGCTTTCTGATTAGCAAGGTCCCGTaGTCCAATGGTATCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GSSHSGGVEPEKQTPRFLISKVP*SNGIFT Trigger: AGTGAAGATACCATTGGATCACGGGACCTTGCTAAT...CAGAAAGCGTGGTGTTTGCTTCTCAGGTTCTACTCCTCCTGAATGAGAGCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGTTGACAAGGTGGTAGCCCAGCCTCCCTaGACTCGGGCTCGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FRDLSQSKCSCSRHVDKVVAQPP*TRARCL Trigger: GAGACAGCGAGCCCGAGTGCAGGGAGGCTGGGCTAC...CACCTTGTCAACATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGAGGCAAAAAGCTTTTGGATCAAATCATCTGTGAGTACAGCCAGAGCAATTGGAGTGGTATTCCTTaGGCACTCGGTGCTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGGKKLLDQIICEYSQSNWSGIP*ALGAAS Trigger: ACTGGCAGCACCGAGTGCCCAAGGAATACCACTCCA...ATTGCTCTGGCTGTACTCACAGATGATTTGATCCAAAAGCTTTTTGCCTCCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111240.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGTAAGTGTTCCTGTAGTAGACATGTTGACAAGGTGACGTGCTGGCAGCTCCCAGCTGAGGTTCTTTaGACACAAATTGTCGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QSKCSCSRHVDKVTCWQLPAEVL*TQIVGH Trigger: GTGACCGACAATTTGTGTTCAAAGAACCTCAGCTGG...GAGCTGCCAGCACGTCACCTTGTCAACATGTCTACTACAGGAACACTTACTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGAGCAGGAGGCAAAAAGCTTTTGGATCAAATCATCTGTGAGTACAGCCAGCCAGCTGAGGTTCTTTaGACACAAATTGTCGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GRAGGKKLLDQIICEYSQPAEVL*TQIVGH Trigger: GTGACCGACAATTTGTGTTCAAAGAACCTCAGCTGG...CTGGCTGTACTCACAGATGATTTGATCCAAAAGCTTTTTGCCTCCTGCTCTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111240.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGAGCAGGAGGCAAAAAGCTTTTGGATCAAATCATCTGTGAGTACAGCCAGAGACACACCAGTAGGTaGCAGGCTGATTTCATACAC | + |
|
Preference number: 4 (lower is better) Translates to: GRAGGKKLLDQIICEYSQRHTSR*QADFIH Trigger: GTGTATGAAATCAGCCTGTCACCTACTGGTGTGTCT...CTGGCTGTACTCACAGATGATTTGATCCAAAAGCTTTTTGCCTCCTGCTCTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111240.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGTAAGTGTTCCTGTAGTAGACATGTTGACAAGGTGACGTGCTGGCAGCTCAAGTTACATCCTCTCTaGTGCCCATCCTCTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSKCSCSRHVDKVTCWQLKLHPL*CPSSVS Trigger: GGAAACAGAGGATGGGCATCAGAGAGGATGTAACTT...GAGCTGCCAGCACGTCACCTTGTCAACATGTCTACTACAGGAACACTTACTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR GCA 90 bp | AACCTTGATTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGTTGGTAGCCCAGCCTCCCTaGACTCGGGCTCGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NLDLEICLKVSVPVVDMLVAQPP*TRARCL Trigger: GAGACAGCGAGCCCGAGTGCAGGGAGGCTGGGCTAC...CAACATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAATCAAGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGTAAGTGTTCCTGTAGTAGACATGTTGACAAGGTGACGTGCTGGCAGCTCTGGTGTTCTCTTCAATaGGGCTCTTCAGAGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QSKCSCSRHVDKVTCWQLWCSLQ*GSSEST Trigger: TGTGGACTCTGAAGAGCCGCATTGAAGAGAACACCA...GAGCTGCCAGCACGTCACCTTGTCAACATGTCTACTACAGGAACACTTACTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGCTCTCATTCAGGAGGAGTAGAACCTGAGAAGCAAACACCACGCTTTCTGCCATGCTGTAAGTCTTaGTTGCGGATAAGTTACATC | + |
|
Preference number: 4 (lower is better) Translates to: GSSHSGGVEPEKQTPRFLPCCKS*LRISYI Trigger: GATGTAACTTATCCGCAACCAAGACTTACAGCATGG...CAGAAAGCGTGGTGTTTGCTTCTCAGGTTCTACTCCTCCTGAATGAGAGCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGCTCTCATTCAGGAGGAGTAGAACCTGAGAAGCAAACACCACGCTTTCTGAAGCCAGTGAGGATTTaGTTCCATAGTGATTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GSSHSGGVEPEKQTPRFLKPVRI*FHSDSR Trigger: TCGAGAATCACTATGGAACCAAATCCTCACTGGCTT...CAGAAAGCGTGGTGTTTGCTTCTCAGGTTCTACTCCTCCTGAATGAGAGCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGTAAGTGTTCCTGTAGTAGACATGTTGACAAGGTGACGTGCTGGCAGCTCTTACTCTCGGTTGTCTaGAGTGGTATTCCTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSKCSCSRHVDKVTCWQLLLSVV*SGIPWA Trigger: TGCCCAAGGAATACCACTCCAGACAACCGAGAGTAA...GAGCTGCCAGCACGTCACCTTGTCAACATGTCTACTACAGGAACACTTACTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGTAAGTGTTCCTGTAGTAGACATGTTGACAAGGTGACGTGCTGGCAGCTCAAGGAGTTGAAGGTGTaGCTGGTGTTCTCTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: QSKCSCSRHVDKVTCWQLKELKV*LVFSSM Trigger: CATTGAAGAGAACACCAGCCACACCTTCAACTCCTT...GAGCTGCCAGCACGTCACCTTGTCAACATGTCTACTACAGGAACACTTACTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR GCA 90 bp | GATAACCTTGATTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGATTGCTGCTGTTCCTTaGTCCTCCAGGCTGGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DNLDLEICLKVSVPVVDMIAAVP*SSRLAP Trigger: CGGGGCCAGCCTGGAGGAGCAAGGAACAGCAGCAAT...CATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAATCAAGGTTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CCA 90 bp | TTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGTTGACAAGGTGCCTAGCAGGGGAAGCTaGCTGAGTAGCAGACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRDLSQSKCSCSRHVDKVPSRGS*LSSRLA Trigger: AGCCAGTCTGCTACTCAGCCAGCTTCCCCTGCTAGG...CACCTTGTCAACATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040005.13 |
||
| CDS-3UTR GCA 90 bp | TTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGTTGACAAGGTGGGTTCATCGTCGCTGTaGCAGTCCACACTGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRDLSQSKCSCSRHVDKVGSSSL*QSTLSF Trigger: GAAGGACAGTGTGGACTGGCACAGCGACGATGAACC...CACCTTGTCAACATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| 3UTR CAA 72 bp | CAAATTAAAGGGGGCAGAGCAGGAGGCAAAAAGCTTTaGGATCAAATCATCTGTGAGTACAGCCAGAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QIKGGRAGGKKL*DQIICEYSQSN Trigger: ATTGCTCTGGCTGTACTCACAGATGATTTGATCCAAAAGCTTTTTGCCTCCTGCTCTGCCCCCTTTAATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111240.8 |
||
| CDS-3UTR TCA 90 bp | TTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGTTGACAAGGTGGTGTGGCTCCTTCCATaGTTAGCAAGGTCCCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FRDLSQSKCSCSRHVDKVVWLLP*LARSRD Trigger: ATCACGGGACCTTGCTAATCATGGAAGGAGCCACAC...CACCTTGTCAACATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CCA 90 bp | GATAACCTTGATTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGCTCGGTTGTCTGGAGTaGTATTCCTTGGGCACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: DNLDLEICLKVSVPVVDMLGCLE*YSLGTR Trigger: CCGAGTGCCCAAGGAATACCACTCCAGACAACCGAG...CATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAATCAAGGTTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CCA 90 bp | GATAACCTTGATTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGGGCTCCTCTTGGGTCTaGATAAACGGTCCGAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DNLDLEICLKVSVPVVDMGSSWV*INGPKG Trigger: ACCTTTCGGACCGTTTATCCAGACCCAAGAGGAGCC...CATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAATCAAGGTTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR TCA 90 bp | TTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGTTGACAAGGTGAAGTTACATCCTCTCTaGTGCCCATCCTCTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRDLSQSKCSCSRHVDKVKLHPL*CPSSVS Trigger: GGAAACAGAGGATGGGCATCAGAGAGGATGTAACTT...CACCTTGTCAACATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CCA 90 bp | GATAACCTTGATTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGGGTCCCGTGATCCAATaGTATCTTCACTCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DNLDLEICLKVSVPVVDMGPVIQ*YLHSLH Trigger: GTGGAGAGAGTGAAGATACCATTGGATCACGGGACC...CATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAATCAAGGTTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR TCA 90 bp | GATAACCTTGATTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGAGACACACCAGTAGGTaGCAGGCTGATTTCATACAC | + |
|
Preference number: 4 (lower is better) Translates to: DNLDLEICLKVSVPVVDMRHTSR*QADFIH Trigger: GTGTATGAAATCAGCCTGTCACCTACTGGTGTGTCT...CATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAATCAAGGTTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR GCA 90 bp | AACCTTGATTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGTTGAAGCTCTCCATACCATaGTGTAAGTCTTGGTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NLDLEICLKVSVPVVDMLKLSIP*CKSWLR Trigger: CCGCAACCAAGACTTACAGCATGGTATGGAGAGCTT...CAACATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAATCAAGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CCA 90 bp | AACCTTGATTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGTTGTTACTCTCGGTTGTCTaGAGTGGTATTCCTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLDLEICLKVSVPVVDMLLLSVV*SGIPWA Trigger: TGCCCAAGGAATACCACTCCAGACAACCGAGAGTAA...CAACATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAATCAAGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR TCA 90 bp | AACCTTGATTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGTTGATTAGCAAGGTCCCGTaGTCCAATGGTATCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: NLDLEICLKVSVPVVDMLISKVP*SNGIFT Trigger: AGTGAAGATACCATTGGATCACGGGACCTTGCTAAT...CAACATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAATCAAGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CCA 90 bp | AACCTTGATTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGTTGAAGGAGTTGAAGGTGTaGCTGGTGTTCTCTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: NLDLEICLKVSVPVVDMLKELKV*LVFSSM Trigger: CATTGAAGAGAACACCAGCCACACCTTCAACTCCTT...CAACATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAATCAAGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS CCA 90 bp | TGGCCCCGCGGTCTGGGAAAGACGGAGTCTCTGCAGGTTCTTGCCTaGCTGAGTAGCAGACTGGCTCTTGGTAGGTGTAGCCCAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WPRGLGKTESLQVLA*LSSRLALGRCSPAS Trigger: GGAGGCTGGGCTACACCTACCAAGAGCCAGTCTGCTACTCAGCCAGGCAAGAACCTGCAGAGACTCCGTCTTTCCCAGACCGCGGGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111240.8 ENSMUST00000126378.8 |
||
| CDS-3UTR CAA 90 bp | AACAGCCACATCACGGAAGTGCTTGCGGGAGATGGGGAGGGGCTGTTAGGTGCACATTGCTGCTGTTCCTaGCTCCTCCAGGCTGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: NSHITEVLAGDGEGLLGAHCCCS*LLQAGP Trigger: GGGGCCAGCCTGGAGGAGCAAGGAACAGCAGCAATG...TGCACCTAACAGCCCCTCCCCATCTCCCGCAAGCACTTCCGTGATGTGGCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CAA 90 bp | CTGAACAGCCACATCACGGAAGTGCTTGCGGGAGATGGGGAGGGGCTGTTAGGTACCGAGGGGCTCCTCTaGGGTCTGGATAAACGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LNSHITEVLAGDGEGLLGTEGLL*GLDKRS Trigger: GGACCGTTTATCCAGACCCAAGAGGAGCCCCTCGGT...ACCTAACAGCCCCTCCCCATCTCCCGCAAGCACTTCCGTGATGTGGCTGTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS CCA 90 bp | CACAAATTGTCGGTCACATTGCTGCTGTTCCTTGCTCCTCCAGGCTaGCCCCGCGGTCTGGGAAAGACGGAGTCTCTGCAGGTTCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HKLSVTLLLFLAPPG*PRGLGKTESLQVLA Trigger: GGCAAGAACCTGCAGAGACTCCGTCTTTCCCAGACCGCGGGGCCAGCCTGGAGGAGCAAGGAACAGCAGCAATGTGACCGACAATTTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111240.8 ENSMUST00000126378.8 |
||
| CDS TCA 90 bp | CCTTGGGCACTCGGTGCTGCCAGTCGGCTTGTGTGGCTCCTTCCATaGTTAGCAAGGTCCCGTGATCCAATGGTATCTTCACTCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PWALGAASRLVWLLP*LARSRDPMVSSLSP Trigger: TGGAGAGAGTGAAGATACCATTGGATCACGGGACCTTGCTAATCATGGAAGGAGCCACACAAGCCGACTGGCAGCACCGAGTGCCCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGCAGCTCTCATTCAGGAGGAGTAGAACCTGAGAAGCAAACACCACGCTTTCTGGAGTGGTATTCCTaGGGCACTCGGTGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGSSHSGGVEPEKQTPRFLEWYS*GTRCCQ Trigger: CTGGCAGCACCGAGTGCCCAAGGAATACCACTCCAG...AAAGCGTGGTGTTTGCTTCTCAGGTTCTACTCCTCCTGAATGAGAGCTGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CAA 90 bp | AGTAAGTGTTCCTGTAGTAGACATGTTGACAAGGTGACGTGCTGGCAGCTCTCACATTGCTGCTGTTCCTaGCTCCTCCAGGCTGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SKCSCSRHVDKVTCWQLSHCCCS*LLQAGP Trigger: GGGGCCAGCCTGGAGGAGCAAGGAACAGCAGCAATG...TGAGAGCTGCCAGCACGTCACCTTGTCAACATGTCTACTACAGGAACACTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS CCA 90 bp | GGTCTGGATAAACGGTCCGAAAGGTTAAGTTTACTCTCGGTTGTCTaGAGTGGTATTCCTTGGGCACTCGGTGCTGCCAGTCGGCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLDKRSERLSLLSVV*SGIPWALGAASRLV Trigger: CACAAGCCGACTGGCAGCACCGAGTGCCCAAGGAATACCACTCCAGACAACCGAGAGTAAACTTAACCTTTCGGACCGTTTATCCAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGTAAGTGTTCCTGTAGTAGACATGTTGACAAGGTGACGTGCTGGCAGCTCCTGGAGTGGTATTCCTaGGGCACTCGGTGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QSKCSCSRHVDKVTCWQLLEWYS*GTRCCQ Trigger: CTGGCAGCACCGAGTGCCCAAGGAATACCACTCCAG...GAGCTGCCAGCACGTCACCTTGTCAACATGTCTACTACAGGAACACTTACTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGTAAGTGTTCCTGTAGTAGACATGTTGACAAGGTGACGTGCTGGCAGCTCGTGCTGCCAGTCGGCTaGTGTGGCTCCTTCCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: QSKCSCSRHVDKVTCWQLVLPVG*CGSFHD Trigger: ATCATGGAAGGAGCCACACAAGCCGACTGGCAGCAC...GAGCTGCCAGCACGTCACCTTGTCAACATGTCTACTACAGGAACACTTACTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS GCA 90 bp | GATTTCATACACACCCTCCCTGTCAATCACTCTGGGTTCTGGGGCTaGACGGACAACCAGCTGAGGTTCTTTGAACACAAATTGTCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: DFIHTLPVNHSGFWG*TDNQLRFFEHKLSV Trigger: GACCGACAATTTGTGTTCAAAGAACCTCAGCTGGTTGTCCGTGCAGCCCCAGAACCCAGAGTGATTGACAGGGAGGGTGTGTATGAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 ENSMUST00000126378.8 |
||
| CDS GCA 90 bp | TCTCTGATGCCCATCCTCTGTTTCCAGGGGACATCCTTACAAAGCTaGTCCAAGATCCAGTCAGCTTCCTTCAAGTCCACAAAGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLMPILCFQGTSLQS*SKIQSASFKSTKPG Trigger: TCCTGGCTTTGTGGACTTGAAGGAAGCTGACTGGATCTTGGAGCAGCTTTGTAAGGATGTCCCCTGGAAACAGAGGATGGGCATCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 ENSMUST00000126378.8 |
||
| CDS TCA 90 bp | CCACACTGTCCTTCTCATCCCGGTAAAAATTACACAGCAAGGAGTTaGAGGTGTGGCTGGTGTTCTCTTCAATGCGGCTCTTCAGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PHCPSHPGKNYTARS*RCGWCSLQCGSSES Trigger: GGACTCTGAAGAGCCGCATTGAAGAGAACACCAGCCACACCTTCAACTCCTTGCTGTGTAATTTTTACCGGGATGAGAAGGACAGTGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 ENSMUST00000126378.8 |
||
| CDS CCA 90 bp | AATGCGGCTCTTCAGAGTCCACAGCACAGGAAGCCAGTGAGGATTTaGTTCCATAGTGATTCTCGAGTAAGTGTAAGGAAGCTCTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: NAALQSPQHRKPVRI*FHSDSRVSVRKLSI Trigger: TATGGAGAGCTTCCTTACACTTACTCGAGAATCACTATGGAACCAAATCCTCACTGGCTTCCTGTGCTGTGGACTCTGAAGAGCCGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 ENSMUST00000126378.8 |
||
| CDS-3UTR CAA 90 bp | GCAGAGCAGGAGGCAAAAAGCTTTTGGATCAAATCATCTGTGAGTACAGCCAGATGCTGTAAGTCTTGGTaGCGGATAAGTTACATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AEQEAKSFWIKSSVSTARCCKSW*RISYIL Trigger: GAGGATGTAACTTATCCGCAACCAAGACTTACAGCA...TCTGGCTGTACTCACAGATGATTTGATCCAAAAGCTTTTTGCCTCCTGCTCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111240.8 |
||
| CDS-3UTR CAA 90 bp | AACCTTGATTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGTTGACCGAGGGGCTCCTCTaGGGTCTGGATAAACGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NLDLEICLKVSVPVVDMLTEGLL*GLDKRS Trigger: GGACCGTTTATCCAGACCCAAGAGGAGCCCCTCGGT...CAACATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAATCAAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS GCA 90 bp | TTCCATAGTGATTCTCGAGTAAGTGTAAGGAAGCTCTCCATACCATaGTGTAAGTCTTGGTTGCGGATAAGTTACATCCTCTCTGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: FHSDSRVSVRKLSIP*CKSWLRISYILSDA Trigger: GGCATCAGAGAGGATGTAACTTATCCGCAACCAAGACTTACAGCATGGTATGGAGAGCTTCCTTACACTTACTCGAGAATCACTATGGAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 ENSMUST00000126378.8 |
||
| CDS-3UTR CAA 90 bp | GATTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGTTGACAAGGTTACACAGCAAGGAGTaGAAGGTGTGGCTGGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: DLEICLKVSVPVVDMLTRLHSKE*KVWLVF Trigger: GAACACCAGCCACACCTTCAACTCCTTGCTGTGTAA...CCTTGTCAACATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS-3UTR CAA 90 bp | AACCTTGATTTAGAGATTTGTCTCAAAGTAAGTGTTCCTGTAGTAGACATGTTGTGCTGTAAGTCTTGGTaGCGGATAAGTTACATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NLDLEICLKVSVPVVDMLCCKSW*RISYIL Trigger: GAGGATGTAACTTATCCGCAACCAAGACTTACAGCA...CAACATGTCTACTACAGGAACACTTACTTTGAGACAAATCTCTAAATCAAGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS CCA 72 bp | TGCTGTTCCTTGCTCCTCCAGGCTGGCCCCGCGGTCTaGGAAAGACGGAGTCTCTGCAGGTTCTTGCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: CCSLLLQAGPAV*ERRSLCRFLPG Trigger: GCCAGGCAAGAACCTGCAGAGACTCCGTCTTTCCCAGACCGCGGGGCCAGCCTGGAGGAGCAAGGAACAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111240.8 ENSMUST00000126378.8 |
||
| CDS CCA 72 bp | CGCGGTCTGGGAAAGACGGCTCCTAGCAGGGGAAGCTaGCTGAGTAGCAGACTGGCTCTTGGTAGGTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: RGLGKTAPSRGS*LSSRLALGRCS Trigger: GCTACACCTACCAAGAGCCAGTCTGCTACTCAGCCAGCTTCCCCTGCTAGGAGCCGTCTTTCCCAGACCGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040005.13 |
||
| CDS TCA 72 bp | GTCTGGGAAAGACGGCTCCTAGCAGGGGAAGCTGGCTaGGTAGCAGACTGGCTCTTGGTAGGTGTAGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VWERRLLAGEAG*VADWLLVGVAQ Trigger: CTGGGCTACACCTACCAAGAGCCAGTCTGCTACTCAGCCAGCTTCCCCTGCTAGGAGCCGTCTTTCCCAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040005.13 |
||
| CDS CCA 72 bp | ACTGAGGGAAGCAATGACGGGGCAGCTCCCCAGGGATaGTTCATCGTCGCTGTGCCAGTCCACACTGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: TEGSNDGAAPQG*FIVAVPVHTVL Trigger: AAGGACAGTGTGGACTGGCACAGCGACGATGAACCATCCCTGGGGAGCTGCCCCGTCATTGCTTCCCTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS CAA 90 bp | ACGGACAACCAGCTGAGGTTCTTTGAACACAAATTGTCGGTCACATaGCTGCTGTTCCTTGCTCCTCCAGGCTGGCCCCGCGGTCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: TDNQLRFFEHKLSVT*LLFLAPPGWPRGLG Trigger: TCCCAGACCGCGGGGCCAGCCTGGAGGAGCAAGGAACAGCAGCAATGTGACCGACAATTTGTGTTCAAAGAACCTCAGCTGGTTGTCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 ENSMUST00000126378.8 |
||
| CDS TCA 72 bp | TGGGAAAGACGGAGTCTCTGCAGGTTCTTGCCTGGCTaGGTAGCAGACTGGCTCTTGGTAGGTGTAGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WERRSLCRFLPG*VADWLLVGVAQ Trigger: CTGGGCTACACCTACCAAGAGCCAGTCTGCTACTCAGCCAGGCAAGAACCTGCAGAGACTCCGTCTTTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111240.8 ENSMUST00000126378.8 |
||
| CDS CCA 72 bp | GGTCTGGGAAAGACGGAGTCTCTGCAGGTTCTTGCCTaGCTGAGTAGCAGACTGGCTCTTGGTAGGTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: GLGKTESLQVLA*LSSRLALGRCS Trigger: GCTACACCTACCAAGAGCCAGTCTGCTACTCAGCCAGGCAAGAACCTGCAGAGACTCCGTCTTTCCCAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111240.8 ENSMUST00000126378.8 |
||
| CDS CAA 90 bp | TTCTGGGGCTGCACGGACAACCAGCTGAGGTTCTTTGAACACAAATaGTCGGTCACATTGCTGCTGTTCCTTGCTCCTCCAGGCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FWGCTDNQLRFFEHK*SVTLLLFLAPPGWP Trigger: GGGCCAGCCTGGAGGAGCAAGGAACAGCAGCAATGTGACCGACAATTTGTGTTCAAAGAACCTCAGCTGGTTGTCCGTGCAGCCCCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 ENSMUST00000126378.8 |
||
| CDS CAA 72 bp | TTGAACACAAATTGTCGGTCACATTGCTGCTGTTCCTaGCTCCTCCAGGCTGGCCCCGCGGTCTGGGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LNTNCRSHCCCS*LLQAGPAVWER Trigger: TCTTTCCCAGACCGCGGGGCCAGCCTGGAGGAGCAAGGAACAGCAGCAATGTGACCGACAATTTGTGTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 ENSMUST00000126378.8 |
||
| CDS TCA 72 bp | CTCGGTGCTGCCAGTCGGCTTGTGTGGCTCCTTCCATaGTTAGCAAGGTCCCGTGATCCAATGGTATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LGAASRLVWLLP*LARSRDPMVSS Trigger: TGAAGATACCATTGGATCACGGGACCTTGCTAATCATGGAAGGAGCCACACAAGCCGACTGGCAGCACCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS CCA 72 bp | TTAAGTTTACTCTCGGTTGTCTGGAGTGGTATTCCTTaGGCACTCGGTGCTGCCAGTCGGCTTGTGTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LSLLSVVWSGIP*ALGAASRLVWL Trigger: GAGCCACACAAGCCGACTGGCAGCACCGAGTGCCCAAGGAATACCACTCCAGACAACCGAGAGTAAACTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS CCA 72 bp | GTCCGAAAGGTTAAGTTTACTCTCGGTTGTCTGGAGTaGTATTCCTTGGGCACTCGGTGCTGCCAGTCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VRKVKFTLGCLE*YSLGTRCCQSA Trigger: AGCCGACTGGCAGCACCGAGTGCCCAAGGAATACCACTCCAGACAACCGAGAGTAAACTTAACCTTTCGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS CAA 72 bp | GTTAAGTTTACTCTCGGTTGTCTGGAGTGGTATTCCTaGGGCACTCGGTGCTGCCAGTCGGCTTGTGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VKFTLGCLEWYS*GTRCCQSACVA Trigger: AGCCACACAAGCCGACTGGCAGCACCGAGTGCCCAAGGAATACCACTCCAGACAACCGAGAGTAAACTTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS TCA 72 bp | GTTCTGGGGCTGCACGGACAACCAGCTGAGGTTCTTTaGACACAAATTGTCGGTCACATTGCTGCTGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VLGLHGQPAEVL*TQIVGHIAAVP Trigger: AGGAACAGCAGCAATGTGACCGACAATTTGTGTTCAAAGAACCTCAGCTGGTTGTCCGTGCAGCCCCAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 ENSMUST00000126378.8 |
||
| CDS CCA 72 bp | AAACGGTCCGAAAGGTTAAGTTTACTCTCGGTTGTCTaGAGTGGTATTCCTTGGGCACTCGGTGCTGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: KRSERLSLLSVV*SGIPWALGAAS Trigger: ACTGGCAGCACCGAGTGCCCAAGGAATACCACTCCAGACAACCGAGAGTAAACTTAACCTTTCGGACCGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS TCA 72 bp | CCTTCTCATCCCGGTAAAAATTACACAGCAAGGAGTTaGAGGTGTGGCTGGTGTTCTCTTCAATGCGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSHPGKNYTARS*RCGWCSLQCGS Trigger: AGAGCCGCATTGAAGAGAACACCAGCCACACCTTCAACTCCTTGCTGTGTAATTTTTACCGGGATGAGAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 ENSMUST00000126378.8 |
||
| CDS TCA 72 bp | GCTTGTGTGGCTCCTTCCATGATTAGCAAGGTCCCGTaGTCCAATGGTATCTTCACTCTCTCCACATATGTA | + |
|
Preference number: 6 (lower is better) Translates to: ACVAPSMISKVP*SNGIFTLSTYV Trigger: TACATATGTGGAGAGAGTGAAGATACCATTGGATCACGGGACCTTGCTAATCATGGAAGGAGCCACACAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 |
||
| CDS CCA 72 bp | CTTCAGAGTCCACAGCACAGGAAGCCAGTGAGGATTTaGTTCCATAGTGATTCTCGAGTAAGTGTAAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LQSPQHRKPVRI*FHSDSRVSVRK Trigger: CTTCCTTACACTTACTCGAGAATCACTATGGAACCAAATCCTCACTGGCTTCCTGTGCTGTGGACTCTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 ENSMUST00000126378.8 |
||
| CDS CAA 72 bp | GTAAGGAAGCTCTCCATACCATGCTGTAAGTCTTGGTaGCGGATAAGTTACATCCTCTCTGATGCCCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: VRKLSIPCCKSW*RISYILSDAHP Trigger: AGGATGGGCATCAGAGAGGATGTAACTTATCCGCAACCAAGACTTACAGCATGGTATGGAGAGCTTCCTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 ENSMUST00000126378.8 |
||
| CDS CCA 72 bp | AGTGTAAGGAAGCTCTCCATACCATGCTGTAAGTCTTaGTTGCGGATAAGTTACATCCTCTCTGATGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SVRKLSIPCCKS*LRISYILSDAH Trigger: ATGGGCATCAGAGAGGATGTAACTTATCCGCAACCAAGACTTACAGCATGGTATGGAGAGCTTCCTTACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 ENSMUST00000126378.8 |
||
| CDS GCA 72 bp | GATTCTCGAGTAAGTGTAAGGAAGCTCTCCATACCATaGTGTAAGTCTTGGTTGCGGATAAGTTACATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DSRVSVRKLSIP*CKSWLRISYIL Trigger: GAGGATGTAACTTATCCGCAACCAAGACTTACAGCATGGTATGGAGAGCTTCCTTACACTTACTCGAGAATC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040005.13 ENSMUST00000111240.8 ENSMUST00000126378.8 |
||