Pregenerated sensors for ALKBH2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000044339

Ensembl transcript IDs: ENSMUST00000053657.13, ENSMUST00000112279.2

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GACCCTCTTGCGGATGGGGAGACTGTGGTACCAGTGGGTGTTGGTTaGGGGGTTCATCATCAGCAGGCTTCCGTGTGCCAGCTGCAGCCT	+
Preference number: 5 (lower is better) Translates to: DPLADGETVVPVGVG*GVHHQQASVCQLQP Trigger: AGGCTGCAGCTGGCACACGGAAGCCTGCTGATGATGAACCCCCCAACCAACACCCACTGGTACCACAGTCTCCCCATCCGCAAGAGGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053657.13 ENSMUST00000112279.2
CDS GCA 90 bp	GACGCGATGGGGCTCCCCGGAGCCAGTTCTCGCTCGTCATCTCTGTaGTCGCCGATGTGGTCGCAACCATCTTTGTACCTGTTCACGAGT	+
Preference number: 5 (lower is better) Translates to: DAMGLPGASSRSSSL*SPMWSQPSLYLFTS Trigger: ACTCGTGAACAGGTACAAAGATGGTTGCGACCACATCGGCGAGCACAGAGATGACGAGCGAGAACTGGCTCCGGGGAGCCCCATCGCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053657.13 ENSMUST00000112279.2
CDS GCA 90 bp	CCTGGGAACACTGTGCCACTTTCCGAACACCTGGACCTTGGCCAGTaGACCAGTAAAATACTCCACTTCTTGCTCCAACTCTCGGAAAAT	+
Preference number: 5 (lower is better) Translates to: PGNTVPLSEHLDLGQ*TSKILHFLLQLSEN Trigger: ATTTTCCGAGAGTTGGAGCAAGAAGTGGAGTATTTTACTGGTGCACTGGCCAAGGTCCAGGTGTTCGGAAAGTGGCACAGTGTTCCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053657.13 ENSMUST00000112279.2
CDS TCA 72 bp	TCATCATCAGCAGGCTTCCGTGTGCCAGCTGCAGCCTaGCCACCTCCACTGTCCTCCGGGGCCTCTTCCCTC	+
Preference number: 6 (lower is better) Translates to: SSSAGFRVPAAA*PPPLSSGASSL Trigger: GAGGGAAGAGGCCCCGGAGGACAGTGGAGGTGGTCAGGCTGCAGCTGGCACACGGAAGCCTGCTGATGATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053657.13 ENSMUST00000112279.2
CDS GCA 72 bp	GGGCTCCCCGGAGCCAGTTCTCGCTCGTCATCTCTGTaGTCGCCGATGTGGTCGCAACCATCTTTGTACCTG	+
Preference number: 6 (lower is better) Translates to: GLPGASSRSSSL*SPMWSQPSLYL Trigger: CAGGTACAAAGATGGTTGCGACCACATCGGCGAGCACAGAGATGACGAGCGAGAACTGGCTCCGGGGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053657.13 ENSMUST00000112279.2
CDS CCA 72 bp	GCGGATGGGGAGACTGTGGTACCAGTGGGTGTTGGTTaGGGGGTTCATCATCAGCAGGCTTCCGTGTGCCAG	+
Preference number: 6 (lower is better) Translates to: ADGETVVPVGVG*GVHHQQASVCQ Trigger: CTGGCACACGGAAGCCTGCTGATGATGAACCCCCCAACCAACACCCACTGGTACCACAGTCTCCCCATCCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053657.13 ENSMUST00000112279.2
CDS CAA 72 bp	CGAAAAGTCAAGTTGACCCGCGGAGCCAGGACCCTCTaGCGGATGGGGAGACTGTGGTACCAGTGGGTGTTG	+
Preference number: 6 (lower is better) Translates to: RKVKLTRGARTL*RMGRLWYQWVL Trigger: CAACACCCACTGGTACCACAGTCTCCCCATCCGCAAGAGGGTCCTGGCTCCGCGGGTCAACTTGACTTTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053657.13 ENSMUST00000112279.2
CDS TCA 72 bp	GGGGCCTCTTCCCTCGAGAGTCTTTGTGCCGGAAAATaGAGTCTCTGCAAGCGCCAAAGGAGACAGACGCGA	+
Preference number: 6 (lower is better) Translates to: GASSLESLCAGK*SLCKRQRRQTR Trigger: TCGCGTCTGTCTCCTTTGGCGCTTGCAGAGACTTCATTTTCCGGCACAAAGACTCTCGAGGGAAGAGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053657.13 ENSMUST00000112279.2
CDS GCA 72 bp	ACTGTCCTCCGGGGCCTCTTCCCTCGAGAGTCTTTGTaGCGGAAAATGAAGTCTCTGCAAGCGCCAAAGGAG	+
Preference number: 6 (lower is better) Translates to: TVLRGLFPRESL*RKMKSLQAPKE Trigger: CTCCTTTGGCGCTTGCAGAGACTTCATTTTCCGGCACAAAGACTCTCGAGGGAAGAGGCCCCGGAGGACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053657.13 ENSMUST00000112279.2
CDS CAA 90 bp	GCCTGCTTCCTGGGAACACTGTGCCACTTTCCGAACACCTGGACCTaGGCCAGTGCACCAGTAAAATACTCCACTTCTTGCTCCAACTCT	+
Preference number: 6 (lower is better) Translates to: ACFLGTLCHFPNTWT*ASAPVKYSTSCSNS Trigger: AGAGTTGGAGCAAGAAGTGGAGTATTTTACTGGTGCACTGGCCAAGGTCCAGGTGTTCGGAAAGTGGCACAGTGTTCCCAGGAAGCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053657.13 ENSMUST00000112279.2
CDS CCA 72 bp	TGCTTCCTGGGAACACTGTGCCACTTTCCGAACACCTaGACCTTGGCCAGTGCACCAGTAAAATACTCCACT	+
Preference number: 6 (lower is better) Translates to: CFLGTLCHFPNT*TLASAPVKYST Trigger: AGTGGAGTATTTTACTGGTGCACTGGCCAAGGTCCAGGTGTTCGGAAAGTGGCACAGTGTTCCCAGGAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053657.13 ENSMUST00000112279.2
CDS CAA 72 bp	CTGGGAACACTGTGCCACTTTCCGAACACCTGGACCTaGGCCAGTGCACCAGTAAAATACTCCACTTCTTGC	+
Preference number: 6 (lower is better) Translates to: LGTLCHFPNTWT*ASAPVKYSTSC Trigger: GCAAGAAGTGGAGTATTTTACTGGTGCACTGGCCAAGGTCCAGGTGTTCGGAAAGTGGCACAGTGTTCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053657.13 ENSMUST00000112279.2
CDS GCA 72 bp	ACTGTGCCACTTTCCGAACACCTGGACCTTGGCCAGTaGACCAGTAAAATACTCCACTTCTTGCTCCAACTC	+
Preference number: 6 (lower is better) Translates to: TVPLSEHLDLGQ*TSKILHFLLQL Trigger: GAGTTGGAGCAAGAAGTGGAGTATTTTACTGGTGCACTGGCCAAGGTCCAGGTGTTCGGAAAGTGGCACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053657.13 ENSMUST00000112279.2
CDS CAA 72 bp	TCGCAACCATCTTTGTACCTGTTCACGAGTACAAAGTaGAAGGTCTGTCCTGTCACCTCGCAGACTCGATCT	+
Preference number: 6 (lower is better) Translates to: SQPSLYLFTSTK*KVCPVTSQTRS Trigger: AGATCGAGTCTGCGAGGTGACAGGACAGACCTTCAACTTTGTACTCGTGAACAGGTACAAAGATGGTTGCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053657.13 ENSMUST00000112279.2