Pregenerated sensors for ALG9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032059Ensembl transcript IDs: ENSMUST00000034561.11, ENSMUST00000159576.2, ENSMUST00000162073.8, ENSMUST00000175728.2, ENSMUST00000177320.2
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGCCACAGAGCGGGAGAACGACAAGAGCCCAAACAGGAAAACTGTaGCCAGCGCCAGCCAGTTGGACGTCACCGTGTAATGCTCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: EPQSGRTTRAQTGKL*PAPASWTSPCNAPG Trigger: GCCTGGAGCATTACACGGTGACGTCCAACTGGCTGGCGCTGGGCACAGTTTTCCTGTTTGGGCTCTTGTCGTTCTCCCGCTCTGTGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR GCA 90 bp | AGAGCCAGGGCCACCAGGGACCAGAGGAGAAAACTCTTCCACCTGTaGTTCCTGGCCAGCAAGTCGAAGGCGATGGGTAAACCAAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: RARATRDQRRKLFHL*FLASKSKAMGKPRA Trigger: AGCTCTTGGTTTACCCATCGCCTTCGACTTGCTGGCCAGGAAGCACAGGTGGAAGAGTTTTCTCCTCTGGTCCCTGGTGGCCCTGGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR GCA 90 bp | AACAAGGTGGAGTGGAGCACTGGACTTCCCCAGGAGTTAGGACTGTaGCTATCTGCAGAGAGCTCACATGCAGAACAGACCCAGGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: NKVEWSTGLPQELGL*LSAESSHAEQTQEQ Trigger: CTGCTCCTGGGTCTGTTCTGCATGTGAGCTCTCTGCAGATAGGCACAGTCCTAACTCCTGGGGAAGTCCAGTGCTCCACTCCACCTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 ENSMUST00000175728.2 |
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| 3UTR CCA 90 bp | CCCTCCAGTGAGTACCTACATGGAGAACAAGGTGGAGTGGAGCACTaGACTTCCCCAGGAGTTAGGACTGTGCCTATCTGCAGAGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: PSSEYLHGEQGGVEH*TSPGVRTVPICREL Trigger: GAGCTCTCTGCAGATAGGCACAGTCCTAACTCCTGGGGAAGTCCAGTGCTCCACTCCACCTTGTTCTCCATGTAGGTACTCACTGGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 ENSMUST00000175728.2 |
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| 3UTR GCA 90 bp | GCTGTCCTCTGGAGTCACCGGGGTGCTAACCTCCACTTTTCTTCCTaGTCGGCTTTGCTTTCCGAGGCTTCAGGATGGTGTAGTTCACAT | + |
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Preference number: 1 (lower is better) Translates to: AVLWSHRGANLHFSS*SALLSEASGWCSSH Trigger: ATGTGAACTACACCATCCTGAAGCCTCGGAAAGCAAAGCCGAGCAGGAAGAAAAGTGGAGGTTAGCACCCCGGTGACTCCAGAGGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR CCA 90 bp | ACGACAAGAGCCCAAACAGGAAAACTGTGCCCAGCGCCAGCCAGTTaGACGTCACCGTGTAATGCTCCAGGCGGTATCGTTGAAACACAA | + |
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Preference number: 1 (lower is better) Translates to: TTRAQTGKLCPAPAS*TSPCNAPGGIVETQ Trigger: TTGTGTTTCAACGATACCGCCTGGAGCATTACACGGTGACGTCCAACTGGCTGGCGCTGGGCACAGTTTTCCTGTTTGGGCTCTTGTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR GCA 90 bp | TGGGAAATCGATACCACTCTTTTCCCACACAGACGTTCACGGGCCTaGCTTCTGGGACAGTGTGGATGGTTGGGTCTGTGGCAATTCTGT | + |
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Preference number: 1 (lower is better) Translates to: WEIDTTLFPHRRSRA*LLGQCGWLGLWQFC Trigger: ACAGAATTGCCACAGACCCAACCATCCACACTGTCCCAGAAGGCAGGCCCGTGAACGTCTGTGTGGGAAAAGAGTGGTATCGATTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR GCA 90 bp | GGAGTCACCGGGGTGCTAACCTCCACTTTTCTTCCTGCTCGGCTTTaGTTTCCGAGGCTTCAGGATGGTGTAGTTCACATACACCGTGTA | + |
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Preference number: 1 (lower is better) Translates to: GVTGVLTSTFLPARL*FPRLQDGVVHIHRV Trigger: TACACGGTGTATGTGAACTACACCATCCTGAAGCCTCGGAAAGCAAAGCCGAGCAGGAAGAAAAGTGGAGGTTAGCACCCCGGTGACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR TCA 90 bp | CAGGAATGGTCTGTGAGCCAGGCTGACCCACTCTTCTCTGTGGGATaGGTAGTTTGGCTCCCGAGGTGTTTCTCTCATGGTATCCAAATC | + |
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Preference number: 1 (lower is better) Translates to: QEWSVSQADPLFSVG*VVWLPRCFSHGIQI Trigger: GATTTGGATACCATGAGAGAAACACCTCGGGAGCCAAACTACTCATCCCACAGAGAAGAGTGGGTCAGCCTGGCTCACAGACCATTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162073.8 ENSMUST00000177320.2 |
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| 3UTR GCA 90 bp | TTGCTGCCGGGAAAAGGCCATATCTGGTTGGCAACTAGGCTGAGCTaGTTTTCAGCAGTAGGATTTGAAGAAGGCCTGCTAGAAGTTGCC | + |
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Preference number: 1 (lower is better) Translates to: LLPGKGHIWLATRLS*FSAVGFEEGLLEVA Trigger: GGCAACTTCTAGCAGGCCTTCTTCAAATCCTACTGCTGAAAAGCAGCTCAGCCTAGTTGCCAACCAGATATGGCCTTTTCCCGGCAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
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| 3UTR TCA 90 bp | CCGAGGCTTCAGGATGGTGTAGTTCACATACACCGTGTACTGATCTaGCAGGAAGGGAACATAGAATGCCCGAAGCAACTTGGAAGACCT | + |
|
Preference number: 1 (lower is better) Translates to: PRLQDGVVHIHRVLI*QEGNIECPKQLGRP Trigger: AGGTCTTCCAAGTTGCTTCGGGCATTCTATGTTCCCTTCCTGTCAGATCAGTACACGGTGTATGTGAACTACACCATCCTGAAGCCTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR CCA 90 bp | GAACACTTTAGAAGCCACGTCTTGCTGCCGGGAAAAGGCCATATCTaGTTGGCAACTAGGCTGAGCTGCTTTTCAGCAGTAGGATTTGAA | + |
|
Preference number: 1 (lower is better) Translates to: EHFRSHVLLPGKGHI*LATRLSCFSAVGFE Trigger: TTCAAATCCTACTGCTGAAAAGCAGCTCAGCCTAGTTGCCAACCAGATATGGCCTTTTCCCGGCAGCAAGACGTGGCTTCTAAAGTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
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| 3UTR CCA 90 bp | TTCCCACACAGACGTTCACGGGCCTGCCTTCTGGGACAGTGTGGATaGTTGGGTCTGTGGCAATTCTGTAAAATTCTGGATATAAATCAA | + |
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Preference number: 1 (lower is better) Translates to: FPHRRSRACLLGQCG*LGLWQFCKILDINQ Trigger: TTGATTTATATCCAGAATTTTACAGAATTGCCACAGACCCAACCATCCACACTGTCCCAGAAGGCAGGCCCGTGAACGTCTGTGTGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR TCA 90 bp | GTGTTTCTCTCATGGTATCCAAATCCACTAAGTAATGGCATTTGCTaGTGTCAATGTATCTGGAAGGCTCCTCTCGGTTCTGGTCGTTCA | + |
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Preference number: 1 (lower is better) Translates to: VFLSWYPNPLSNGIC*CQCIWKAPLGSGRS Trigger: TGAACGACCAGAACCGAGAGGAGCCTTCCAGATACATTGACATCAGCAAATGCCATTACTTAGTGGATTTGGATACCATGAGAGAAACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR-3UTR GCA 90 bp | GATGCTGGCCAGAGAGTGGAGAAGGCTAGCCCACACCGAGTTAGGTCCTCTCGCAGGACTGTGCCTATCTaGAGAGAGCTCACATGCAGA | + |
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Preference number: 2 (lower is better) Translates to: DAGQRVEKASPHRVRSSRRTVPI*RELTCR Trigger: TCTGCATGTGAGCTCTCTGCAGATAGGCACAGTCCT...GCGAGAGGACCTAACTCGGTGTGGGCTAGCCTTCTCCACTCTCTGGCCAGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 ENSMUST00000175728.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGCTTGGTAGTTCTCAGATGCTGGCCAGAGAGTGGAGAAGGCTAGCCCACAAATCAAGGGGCCCGTaGTATCCTCTGAACAGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: GRLGSSQMLAREWRRLAHKSRGP*YPLNRA Trigger: GGCTCTGTTCAGAGGATACCACGGGCCCCTTGATTT...GTGGGCTAGCCTTCTCCACTCTCTGGCCAGCATCTGAGAACTACCAAGCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR CAA 90 bp | GCTTCAGGACAGTGTCAGTCCTGGGAACACTTTAGAAGCCACGTCTaGCTGCCGGGAAAAGGCCATATCTGGTTGGCAACTAGGCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: ASGQCQSWEHFRSHV*LPGKGHIWLATRLS Trigger: GCTCAGCCTAGTTGCCAACCAGATATGGCCTTTTCCCGGCAGCAAGACGTGGCTTCTAAAGTGTTCCCAGGACTGACACTGTCCTGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
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| 3UTR-3UTR CCA 90 bp | CCGTGTACTGATCTGACAGGAAGGGAACATAGAATGCCCGAAGCAACTTGGAAGTGGGAACAGTCCTGGTaGCCAGTGGTCCCTCTGCGA | + |
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Preference number: 2 (lower is better) Translates to: PCTDLTGREHRMPEATWKWEQSW*PVVPLR Trigger: TCGCAGAGGGACCACTGGCCACCAGGACTGTTCCCA...CTTCCAAGTTGCTTCGGGCATTCTATGTTCCCTTCCTGTCAGATCAGTACACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR CAA 90 bp | TGGAGTCACCGGGGTGCTAACCTCCACTTTTCTTCCTGCTCGGCTTaGCTTTCCGAGGCTTCAGGATGGTGTAGTTCACATACACCGTGT | + |
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Preference number: 2 (lower is better) Translates to: WSHRGANLHFSSCSA*LSEASGWCSSHTPC Trigger: ACACGGTGTATGTGAACTACACCATCCTGAAGCCTCGGAAAGCAAAGCCGAGCAGGAAGAAAAGTGGAGGTTAGCACCCCGGTGACTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR-3UTR GCA 90 bp | GGTAGTTCTCAGATGCTGGCCAGAGAGTGGAGAAGGCTAGCCCACACCGAGTTAAGGACTGTGCCTATCTaGAGAGAGCTCACATGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: GSSQMLAREWRRLAHTELRTVPI*RELTCR Trigger: TCTGCATGTGAGCTCTCTGCAGATAGGCACAGTCCT...TAACTCGGTGTGGGCTAGCCTTCTCCACTCTCTGGCCAGCATCTGAGAACTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 ENSMUST00000175728.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGGCTGTCCTCTGGAGTCACCGGGGTGCTAACCTCCACTTTTCTTCCTGCTTTCAGCAGTAGGATTTaGAGAAGGCCTGCTAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: HRLSSGVTGVLTSTFLPAFSSRI*RRPARS Trigger: ACTTCTAGCAGGCCTTCTTCAAATCCTACTGCTGAA...AGCAGGAAGAAAAGTGGAGGTTAGCACCCCGGTGACTCCAGAGGACAGCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAGGCTTGGTAGTTCTCAGATGCTGGCCAGAGAGTGGAGAAGGCTAGCCCACTATACAAAACAATGTTaGGAGGGGCAACCACCAACT | + |
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Preference number: 2 (lower is better) Translates to: GRLGSSQMLAREWRRLAHYTKQC*EGQPPT Trigger: AGTTGGTGGTTGCCCCTCTCAACATTGTTTTGTATA...GTGGGCTAGCCTTCTCCACTCTCTGGCCAGCATCTGAGAACTACCAAGCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCGGGAAAAGGCCATATCTGGTTGGCAACTAGGCTGAGCTGCTTTTCAGCAGGGTGTCCTAAATTCTaGACATGGAACCTCTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LPGKGHIWLATRLSCFSAGCPKF*TWNLCS Trigger: GCTGCAGAGGTTCCATGTTCAGAATTTAGGACACCC...TGCTGAAAAGCAGCTCAGCCTAGTTGCCAACCAGATATGGCCTTTTCCCGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR-3UTR TCA 90 bp | GCTAGAAGTTGCCAAACAGCTCTGAGAGAGAAACCTTGTAGTCTAAGGGAGGCTTCCAGGAATGGTCTGTaGGCCAGGCTGACCCACTCT | + |
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Preference number: 2 (lower is better) Translates to: ARSCQTALREKPCSLREASRNGL*ARLTHS Trigger: AGAGTGGGTCAGCCTGGCTCACAGACCATTCCTGGA...AGCCTCCCTTAGACTACAAGGTTTCTCTCTCAGAGCTGTTTGGCAACTTCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR-3UTR CCA 90 bp | AGCACGTTCTACTCTTCTCCCTCCAGTGAGTACCTACATGGAGAACAAGGTGGATCTAACAGGATGCCTTaGAGGAAGTCGGCTCCGTGG | + |
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Preference number: 2 (lower is better) Translates to: STFYSSPSSEYLHGEQGGSNRMP*RKSAPW Trigger: CCACGGAGCCGACTTCCTCCAAGGCATCCTGTTAGA...TCCACCTTGTTCTCCATGTAGGTACTCACTGGAGGGAGAAGAGTAGAACGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 ENSMUST00000175728.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTGGTTGGCAACTAGGCTGAGCTGCTTTTCAGCAGTAGGATTTGAAGAAGGCTCCACCTGTGCTTCCTaGCCAGCAAGTCGAAGGCGA | + |
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Preference number: 2 (lower is better) Translates to: IWLATRLSCFSAVGFEEGSTCAS*PASRRR Trigger: TCGCCTTCGACTTGCTGGCCAGGAAGCACAGGTGGA...GCCTTCTTCAAATCCTACTGCTGAAAAGCAGCTCAGCCTAGTTGCCAACCAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR CAA 90 bp | CGCCAGCCAGTTGGACGTCACCGTGTAATGCTCCAGGCGGTATCGTaGAAACACAAAGTGGTAGCATTTCTGAAGTGCAGAAAGAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: RQPVGRHRVMLQAVS*KHKVVAFLKCRKSN Trigger: GTTGCTCTTTCTGCACTTCAGAAATGCTACCACTTTGTGTTTCAACGATACCGCCTGGAGCATTACACGGTGACGTCCAACTGGCTGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR-3UTR GCA 90 bp | ACTTCCCCAGGAGTTAGGACTGTGCCTATCTGCAGAGAGCTCACATGCAGAACACAGGAGTTAGGACTGTaGCTATCTGCAGAGAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: TSPGVRTVPICRELTCRTQELGL*LSAESS Trigger: TGAGCTCTCTGCAGATAGGCACAGTCCTAACTCCTG...TGTTCTGCATGTGAGCTCTCTGCAGATAGGCACAGTCCTAACTCCTGGGGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 ENSMUST00000175728.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTTTCAGCAGTAGGATTTGAAGAAGGCCTGCTAGAAGTTGCCAAACAGCTCATGCTGGCCAGAGAGTaGAGAAGGCTAGCCCACACC | + |
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Preference number: 2 (lower is better) Translates to: CFSAVGFEEGLLEVAKQLMLARE*RRLAHT Trigger: GGTGTGGGCTAGCCTTCTCCACTCTCTGGCCAGCAT...GAGCTGTTTGGCAACTTCTAGCAGGCCTTCTTCAAATCCTACTGCTGAAAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 ENSMUST00000175728.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCGCCTTTTTCCTGAGCTTCAGGACAGTGTCAGTCCTGGGAACACTTTAGAAAGGACTGTGCCTATCTaGAGAGAGCTCACATGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GRLFPELQDSVSPGNTLERTVPI*RELTCR Trigger: TCTGCATGTGAGCTCTCTGCAGATAGGCACAGTCCT...TTCTAAAGTGTTCCCAGGACTGACACTGTCCTGAAGCTCAGGAAAAAGGCGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTATTACAGCTCTAACAGGATGCCTTGGAGGAAGTCGGCTCCGTGGAAGCCCGCAGAAGGAAGCTACTaGGAAATCGATACCACTCTT | + |
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Preference number: 2 (lower is better) Translates to: LYYSSNRMPWRKSAPWKPAEGSY*EIDTTL Trigger: AAGAGTGGTATCGATTTCCCAGTAGCTTCCTTCTGC...GGGCTTCCACGGAGCCGACTTCCTCCAAGGCATCCTGTTAGAGCTGTAATAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR CAA 90 bp | CACTTTAGAAGCCACGTCTTGCTGCCGGGAAAAGGCCATATCTGGTaGGCAACTAGGCTGAGCTGCTTTTCAGCAGTAGGATTTGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: HFRSHVLLPGKGHIW*ATRLSCFSAVGFEE Trigger: TTCTTCAAATCCTACTGCTGAAAAGCAGCTCAGCCTAGTTGCCAACCAGATATGGCCTTTTCCCGGCAGCAAGACGTGGCTTCTAAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCCTGCTAGAAGTTGCCAAACAGCTCTGAGAGAGAAACCTTGTAGTCTAAGGCAGGAGTTAGGACTGTaGCTATCTGCAGAGAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: RPARSCQTALREKPCSLRQELGL*LSAESS Trigger: TGAGCTCTCTGCAGATAGGCACAGTCCTAACTCCTG...CCTTAGACTACAAGGTTTCTCTCTCAGAGCTGTTTGGCAACTTCTAGCAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 ENSMUST00000175728.2 |
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| 3UTR-3UTR GCA 90 bp | CCGTGTACTGATCTGACAGGAAGGGAACATAGAATGCCCGAAGCAACTTGGAAGTTGGTAGTTCTCAGATaGTGGCCAGAGAGTGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: PCTDLTGREHRMPEATWKLVVLR*WPESGE Trigger: TTCTCCACTCTCTGGCCAGCATCTGAGAACTACCAA...CTTCCAAGTTGCTTCGGGCATTCTATGTTCCCTTCCTGTCAGATCAGTACACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR-3UTR CCA 90 bp | GCTAGAAGTTGCCAAACAGCTCTGAGAGAGAAACCTTGTAGTCTAAGGGAGGCTACATGGAGAACAAGGTaGAGTGGAGCACTGGACTTC | + |
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Preference number: 2 (lower is better) Translates to: ARSCQTALREKPCSLREATWRTR*SGALDF Trigger: GAAGTCCAGTGCTCCACTCCACCTTGTTCTCCATGT...AGCCTCCCTTAGACTACAAGGTTTCTCTCTCAGAGCTGTTTGGCAACTTCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 ENSMUST00000175728.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTGGTTGGCAACTAGGCTGAGCTGCTTTTCAGCAGTAGGATTTGAAGAAGGCGTTGCCAAACAGCTCTaGGAGAGAAACCTTGTAGTC | + |
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Preference number: 2 (lower is better) Translates to: IWLATRLSCFSAVGFEEGVAKQL*ERNLVV Trigger: GACTACAAGGTTTCTCTCTCAGAGCTGTTTGGCAAC...GCCTTCTTCAAATCCTACTGCTGAAAAGCAGCTCAGCCTAGTTGCCAACCAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 ENSMUST00000175728.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCCTGCTAGAAGTTGCCAAACAGCTCTGAGAGAGAAACCTTGTAGTCTAAGGTTGGTAGTTCTCAGATaGTGGCCAGAGAGTGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: RPARSCQTALREKPCSLRLVVLR*WPESGE Trigger: TTCTCCACTCTCTGGCCAGCATCTGAGAACTACCAA...CCTTAGACTACAAGGTTTCTCTCTCAGAGCTGTTTGGCAACTTCTAGCAGGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 ENSMUST00000175728.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGCTTCAGGACAGTGTCAGTCCTGGGAACACTTTAGAAGCCACGTCTTGCAAACCAAATATACATTaGCGCCAAGGTCAGCCAATA | + |
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Preference number: 2 (lower is better) Translates to: PELQDSVSPGNTLEATSCKPNIH*RQGQPI Trigger: TATTGGCTGACCTTGGCGCCAATGTATATTTGGTTT...GCAAGACGTGGCTTCTAAAGTGTTCCCAGGACTGACACTGTCCTGAAGCTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCGGTATCGTTGAAACACAAAGTGGTAGCATTTCTGAAGTGCAGAAAGAGCTCCTCTCGCAGTTTCTaGAAGCACGTTCTACTCTTC | + |
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Preference number: 2 (lower is better) Translates to: QAVSLKHKVVAFLKCRKSSSRSF*KHVLLF Trigger: GAAGAGTAGAACGTGCTTGCAGAAACTGCGAGAGGA...GCTCTTTCTGCACTTCAGAAATGCTACCACTTTGTGTTTCAACGATACCGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCATCATTAAATAATATGATTAGGTCACAGTTCTTCAGTGGTCGCCTTTTTTCTAACAGGATGCCTTaGAGGAAGTCGGCTCCGTGG | + |
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Preference number: 2 (lower is better) Translates to: KASLNNMIRSQFFSGRLFSNRMP*RKSAPW Trigger: CCACGGAGCCGACTTCCTCCAAGGCATCCTGTTAGA...AAAAAGGCGACCACTGAAGAACTGTGACCTAATCATATTATTTAATGATGCCTT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGCATCATTAAATAATATGATTAGGTCACAGTTCTTCAGTGGTCGCCTTTTTAAACTCTTCCACCTGTaGTTCCTGGCCAGCAAGTCG | + |
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Preference number: 2 (lower is better) Translates to: KASLNNMIRSQFFSGRLFKLFHL*FLASKS Trigger: CGACTTGCTGGCCAGGAAGCACAGGTGGAAGAGTTT...AAAAAGGCGACCACTGAAGAACTGTGACCTAATCATATTATTTAATGATGCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR CCA 72 bp | TGGAAGGCTCCTCTCGGTTCTGGTCGTTCATGTGAGTaGGAACAGTCCTGGTGGCCAGTGGTCCCTCTGCGA | + |
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Preference number: 3 (lower is better) Translates to: WKAPLGSGRSCE*EQSWWPVVPLR Trigger: TCGCAGAGGGACCACTGGCCACCAGGACTGTTCCCACTCACATGAACGACCAGAACCGAGAGGAGCCTTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR CCA 72 bp | GCCCAAACAGGAAAACTGTGCCCAGCGCCAGCCAGTTaGACGTCACCGTGTAATGCTCCAGGCGGTATCGTT | + |
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Preference number: 3 (lower is better) Translates to: AQTGKLCPAPAS*TSPCNAPGGIV Trigger: AACGATACCGCCTGGAGCATTACACGGTGACGTCCAACTGGCTGGCGCTGGGCACAGTTTTCCTGTTTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR TCA 72 bp | GGGCAACCACCAACTTCCCGTAATAGTAGCTGTCAATaGCCACCACGGGCACCAAGAAGAGAGCCAGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: GQPPTSRNSSCQ*PPRAPRREPGP Trigger: TGGCCCTGGCTCTCTTCTTGGTGCCCGTGGTGGTCATTGACAGCTACTATTACGGGAAGTTGGTGGTTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
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| 3UTR TCA 72 bp | TATCTGGAAGGCTCCTCTCGGTTCTGGTCGTTCATGTaGGTGGGAACAGTCCTGGTGGCCAGTGGTCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: YLEGSSRFWSFM*VGTVLVASGPS Trigger: AGAGGGACCACTGGCCACCAGGACTGTTCCCACTCACATGAACGACCAGAACCGAGAGGAGCCTTCCAGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| 3UTR GCA 72 bp | GCCACCAGGGACCAGAGGAGAAAACTCTTCCACCTGTaGTTCCTGGCCAGCAAGTCGAAGGCGATGGGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: ATRDQRRKLFHL*FLASKSKAMGK Trigger: TTTACCCATCGCCTTCGACTTGCTGGCCAGGAAGCACAGGTGGAAGAGTTTTCTCCTCTGGTCCCTGGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| 3UTR GCA 72 bp | AGCGGGAGAACGACAAGAGCCCAAACAGGAAAACTGTaGCCAGCGCCAGCCAGTTGGACGTCACCGTGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: SGRTTRAQTGKL*PAPASWTSPCN Trigger: ATTACACGGTGACGTCCAACTGGCTGGCGCTGGGCACAGTTTTCCTGTTTGGGCTCTTGTCGTTCTCCCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| 3UTR GCA 72 bp | GATACCACTCTTTTCCCACACAGACGTTCACGGGCCTaGCTTCTGGGACAGTGTGGATGGTTGGGTCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: DTTLFPHRRSRA*LLGQCGWLGLW Trigger: CCACAGACCCAACCATCCACACTGTCCCAGAAGGCAGGCCCGTGAACGTCTGTGTGGGAAAAGAGTGGTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| 3UTR GCA 72 bp | CACTGGACTTCCCCAGGAGTTAGGACTGTGCCTATCTaGAGAGAGCTCACATGCAGAACAGACCCAGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: HWTSPGVRTVPI*RELTCRTDPGA Trigger: TGCTCCTGGGTCTGTTCTGCATGTGAGCTCTCTGCAGATAGGCACAGTCCTAACTCCTGGGGAAGTCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 ENSMUST00000175728.2 |
||
| 3UTR CCA 72 bp | GGGACCAGAGGAGAAAACTCTTCCACCTGTGCTTCCTaGCCAGCAAGTCGAAGGCGATGGGTAAACCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GTRGENSSTCAS*PASRRRWVNQE Trigger: CTCTTGGTTTACCCATCGCCTTCGACTTGCTGGCCAGGAAGCACAGGTGGAAGAGTTTTCTCCTCTGGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| 3UTR TCA 72 bp | TCTGTGAGCCAGGCTGACCCACTCTTCTCTGTGGGATaGGTAGTTTGGCTCCCGAGGTGTTTCTCTCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: SVSQADPLFSVG*VVWLPRCFSHG Trigger: ACCATGAGAGAAACACCTCGGGAGCCAAACTACTCATCCCACAGAGAAGAGTGGGTCAGCCTGGCTCACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162073.8 ENSMUST00000177320.2 |
||
| 3UTR GCA 72 bp | GTCAGTCCTGGGAACACTTTAGAAGCCACGTCTTGCTaGCGGGAAAAGGCCATATCTGGTTGGCAACTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VSPGNTLEATSC*REKAISGWQLG Trigger: GCCTAGTTGCCAACCAGATATGGCCTTTTCCCGGCAGCAAGACGTGGCTTCTAAAGTGTTCCCAGGACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| 3UTR CCA 72 bp | AGAAGCCACGTCTTGCTGCCGGGAAAAGGCCATATCTaGTTGGCAACTAGGCTGAGCTGCTTTTCAGCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: RSHVLLPGKGHI*LATRLSCFSAV Trigger: TACTGCTGAAAAGCAGCTCAGCCTAGTTGCCAACCAGATATGGCCTTTTCCCGGCAGCAAGACGTGGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCGCCTTTTTCCTGAGCTTCAGGACAGTGTCAGTCCTGGGAACACTTTAGAAAAAGGCCATATCTGGTaGGCAACTAGGCTGAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GRLFPELQDSVSPGNTLEKGHIW*ATRLSC Trigger: GCAGCTCAGCCTAGTTGCCAACCAGATATGGCCTTT...TTCTAAAGTGTTCCCAGGACTGACACTGTCCTGAAGCTCAGGAAAAAGGCGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| 3UTR GCA 72 bp | AGTGTCAGTCCTGGGAACACTTTAGAAGCCACGTCTTaGTGCCGGGAAAAGGCCATATCTGGTTGGCAACTA | + |
|
Preference number: 3 (lower is better) Translates to: SVSPGNTLEATS*CREKAISGWQL Trigger: TAGTTGCCAACCAGATATGGCCTTTTCCCGGCAGCAAGACGTGGCTTCTAAAGTGTTCCCAGGACTGACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| 3UTR GCA 72 bp | GGGGTGCTAACCTCCACTTTTCTTCCTGCTCGGCTTTaGTTTCCGAGGCTTCAGGATGGTGTAGTTCACATA | + |
|
Preference number: 3 (lower is better) Translates to: GVLTSTFLPARL*FPRLQDGVVHI Trigger: TATGTGAACTACACCATCCTGAAGCCTCGGAAAGCAAAGCCGAGCAGGAAGAAAAGTGGAGGTTAGCACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| 3UTR TCA 72 bp | GAAGTGCAGAAAGAGCAACAGCACCACAGAGGCATATaGGCGGATAGACTGGGAAGAGAAAGCGCTCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: EVQKEQQHHRGI*ADRLGRESALL Trigger: AAGAAGAGCGCTTTCTCTTCCCAGTCTATCCGCTCATATGCCTCTGTGGTGCTGTTGCTCTTTCTGCACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| 3UTR CCA 72 bp | AGCAACAGCACCACAGAGGCATATGAGCGGATAGACTaGGAAGAGAAAGCGCTCTTCTTTATGAGGCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SNSTTEAYERID*EEKALFFMRLD Trigger: ATCCAGCCTCATAAAGAAGAGCGCTTTCTCTTCCCAGTCTATCCGCTCATATGCCTCTGTGGTGCTGTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| 3UTR CCA 72 bp | TCTTCCTGCTCGGCTTTGCTTTCCGAGGCTTCAGGATaGTGTAGTTCACATACACCGTGTACTGATCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: SSCSALLSEASG*CSSHTPCTDLT Trigger: TGTCAGATCAGTACACGGTGTATGTGAACTACACCATCCTGAAGCCTCGGAAAGCAAAGCCGAGCAGGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| 3UTR GCA 72 bp | GGAAAAGGCCATATCTGGTTGGCAACTAGGCTGAGCTaGTTTTCAGCAGTAGGATTTGAAGAAGGCCTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: GKGHIWLATRLS*FSAVGFEEGLL Trigger: TAGCAGGCCTTCTTCAAATCCTACTGCTGAAAAGCAGCTCAGCCTAGTTGCCAACCAGATATGGCCTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 ENSMUST00000175728.2 |
||
| 3UTR CCA 72 bp | ACTGAAGCTGCCAATTGTCAGGCAGAAGGAAGCTACTaGGAAATCGATACCACTCTTTTCCCACACAGACGT | + |
|
Preference number: 3 (lower is better) Translates to: TEAANCQAEGSY*EIDTTLFPHRR Trigger: ACGTCTGTGTGGGAAAAGAGTGGTATCGATTTCCCAGTAGCTTCCTTCTGCCTGACAATTGGCAGCTTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| 3UTR TCA 72 bp | CAGGATGGTGTAGTTCACATACACCGTGTACTGATCTaGCAGGAAGGGAACATAGAATGCCCGAAGCAACTT | + |
|
Preference number: 3 (lower is better) Translates to: QDGVVHIHRVLI*QEGNIECPKQL Trigger: AAGTTGCTTCGGGCATTCTATGTTCCCTTCCTGTCAGATCAGTACACGGTGTATGTGAACTACACCATCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| 3UTR TCA 72 bp | TCATGGTATCCAAATCCACTAAGTAATGGCATTTGCTaGTGTCAATGTATCTGGAAGGCTCCTCTCGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SWYPNPLSNGIC*CQCIWKAPLGS Trigger: AGAACCGAGAGGAGCCTTCCAGATACATTGACATCAGCAAATGCCATTACTTAGTGGATTTGGATACCATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGCCACCAGGGACCAGAGGAGAAAACTCTTCCACCTGTGCTTCCTGGCCAGACGGCCACCCTAAGATaGCACCAGCTGCTACTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGHQGPEEKTLPPVLPGQTATLR*HQLLLP Trigger: TGGGAGTAGCAGCTGGTGCCATCTTAGGGTGGCCGT...CTGGCCAGGAAGCACAGGTGGAAGAGTTTTCTCCTCTGGTCCCTGGTGGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGCTGGCCAGAGAGTGGAGAAGGCTAGCCCACACCGAGTTAGGTCCTCTCCACGGGCCTGCCTTCTaGGACAGTGTGGATGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QMLAREWRRLAHTELGPLHGPAF*DSVDGW Trigger: CCAACCATCCACACTGTCCCAGAAGGCAGGCCCGTG...GAGAGGACCTAACTCGGTGTGGGCTAGCCTTCTCCACTCTCTGGCCAGCATCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR TCA 90 bp | GAGTGGAGCACTGGACTTCCCCAGGAGTTAGGACTGTGCCTATCTGCAGAGAGCGTCTGTGAGCCAGGCTaGCCCACTCTTCTCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EWSTGLPQELGLCLSAESVCEPG*PTLLCG Trigger: CCCACAGAGAAGAGTGGGTCAGCCTGGCTCACAGAC...GCTCTCTGCAGATAGGCACAGTCCTAACTCCTGGGGAAGTCCAGTGCTCCACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR GCA 90 bp | GCTGGCCAGAGAGTGGAGAAGGCTAGCCCACACCGAGTTAGGTCCTCTCGCAGTAATCCGTGCATGAAATaGAGCTGGCCAGGCGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGQRVEKASPHRVRSSRSNPCMK*SWPGVQ Trigger: CTGCACGCCTGGCCAGCTGCATTTCATGCACGGATT...ACTGCGAGAGGACCTAACTCGGTGTGGGCTAGCCTTCTCCACTCTCTGGCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGCCAGAGAGTGGAGAAGGCTAGCCCACACCGAGTTAGGTCCTCTCGCAGTTCAGCGTGGTGTACATaGAGAAGCTGCTGGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGQRVEKASPHRVRSSRSSAWCT*RSCWGG Trigger: TCCTCCCCAGCAGCTTCTGCATGTACACCACGCTGA...ACTGCGAGAGGACCTAACTCGGTGTGGGCTAGCCTTCTCCACTCTCTGGCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGCCACCAGGGACCAGAGGAGAAAACTCTTCCACCTGTGCTTCCTGGCCAGTCAGCGTGGTGTACATaGAGAAGCTGCTGGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGHQGPEEKTLPPVLPGQSAWCT*RSCWGG Trigger: TCCTCCCCAGCAGCTTCTGCATGTACACCACGCTGA...CTGGCCAGGAAGCACAGGTGGAAGAGTTTTCTCCTCTGGTCCCTGGTGGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| CDS-3UTR GCA 90 bp | CAGATGCTGGCCAGAGAGTGGAGAAGGCTAGCCCACACCGAGTTAGGTCCTCTCAGACGTTCACGGGCCTaGCTTCTGGGACAGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QMLAREWRRLAHTELGPLRRSRA*LLGQCG Trigger: TCCACACTGTCCCAGAAGGCAGGCCCGTGAACGTCT...GAGAGGACCTAACTCGGTGTGGGCTAGCCTTCTCCACTCTCTGGCCAGCATCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR CCA 90 bp | GGAGAACAAGGTGGAGTGGAGCACTGGACTTCCCCAGGAGTTAGGACTGTGCCTTGGGAACAGTCCTGGTaGCCAGTGGTCCCTCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GEQGGVEHWTSPGVRTVPWEQSW*PVVPLR Trigger: TCGCAGAGGGACCACTGGCCACCAGGACTGTTCCCA...AGGCACAGTCCTAACTCCTGGGGAAGTCCAGTGCTCCACTCCACCTTGTTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000175728.2 |
||
| CDS-3UTR TCA 90 bp | GAGTGGAGCACTGGACTTCCCCAGGAGTTAGGACTGTGCCTATCTGCAGAGAGCTCCAGGAATGGTCTGTaGGCCAGGCTGACCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: EWSTGLPQELGLCLSAESSRNGL*ARLTHS Trigger: AGAGTGGGTCAGCCTGGCTCACAGACCATTCCTGGA...GCTCTCTGCAGATAGGCACAGTCCTAACTCCTGGGGAAGTCCAGTGCTCCACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR GCA 90 bp | CAGGATGCCTTGGAGGAAGTCGGCTCCGTGGAAGCCCTAGTTAGCACAGGCTGTCAAACAGGAAAACTGTaGCCAGCGCCAGCCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QDALEEVGSVEALVSTGCQTGKL*PAPASW Trigger: CCAACTGGCTGGCGCTGGGCACAGTTTTCCTGTTTG...ACAGCCTGTGCTAACTAGGGCTTCCACGGAGCCGACTTCCTCCAAGGCATCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR CCA 90 bp | GAGTGGAGCACTGGACTTCCCCAGGAGTTAGGACTGTGCCTATCTGCAGAGAGCTGCATGAAATGCAGCTaGCCAGGCGTGCAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EWSTGLPQELGLCLSAESCMKCS*PGVQQQ Trigger: CTGCTGCTGCACGCCTGGCCAGCTGCATTTCATGCA...GCTCTCTGCAGATAGGCACAGTCCTAACTCCTGGGGAAGTCCAGTGCTCCACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR TCA 90 bp | GATGCTGGCCAGAGAGTGGAGAAGGCTAGCCCACACCGAGTTAGGTCCTCTCGCCTGAGAGCAGACACTTaGAAGCAGTGGATCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DAGQRVEKASPHRVRSSRLRADT*KQWILQ Trigger: CTGAAGGATCCACTGCTTTCAAGTGTCTGCTCTCAG...GCGAGAGGACCTAACTCGGTGTGGGCTAGCCTTCTCCACTCTCTGGCCAGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCGAAGCAACTTGGAAGACCTAGACGCATCCAGGAATGGTCTGTGAGCCAGTGCAGAATCCGTGCATaGAATGCAGCTGGCCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CPKQLGRPRRIQEWSVSQCRIRA*NAAGQA Trigger: CGCCTGGCCAGCTGCATTTCATGCACGGATTCTGCA...CTGGCTCACAGACCATTCCTGGATGCGTCTAGGTCTTCCAAGTTGCTTCGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAAATCGATACCACTCTTTTCCCACACAGACGTTCACGGGCCTGCCTTCTGAGAACATGCCCGTGCTaGGCACCAGGAAGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WEIDTTLFPHRRSRACLLRTCPC*APGRPA Trigger: TGCTGGCCTTCCTGGTGCTCAGCACGGGCATGTTCT...CAGAAGGCAGGCCCGTGAACGTCTGTGTGGGAAAAGAGTGGTATCGATTTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| CDS-3UTR GCA 90 bp | CCTAGACGCATCCAGGAATGGTCTGTGAGCCAGGCTGACCCACTCTTCTCTGTGCAAACAGGAAAACTGTaGCCAGCGCCAGCCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRRIQEWSVSQADPLFSVQTGKL*PAPASW Trigger: CCAACTGGCTGGCGCTGGGCACAGTTTTCCTGTTTG...CACAGAGAAGAGTGGGTCAGCCTGGCTCACAGACCATTCCTGGATGCGTCTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177320.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCGAAGCAACTTGGAAGACCTAGACGCATCCAGGAATGGTCTGTGAGCCAGAGACGTTCACGGGCCTaGCTTCTGGGACAGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CPKQLGRPRRIQEWSVSQRRSRA*LLGQCG Trigger: TCCACACTGTCCCAGAAGGCAGGCCCGTGAACGTCT...CTGGCTCACAGACCATTCCTGGATGCGTCTAGGTCTTCCAAGTTGCTTCGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177320.2 |
||
| CDS-3UTR CCA 90 bp | ATGGAGAACAAGGTGGAGTGGAGCACTGGACTTCCCCAGGAGTTAGGACTGTGCACGGCCACCCTAAGATaGCACCAGCTGCTACTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MENKVEWSTGLPQELGLCTATLR*HQLLLP Trigger: TGGGAGTAGCAGCTGGTGCCATCTTAGGGTGGCCGT...GCACAGTCCTAACTCCTGGGGAAGTCCAGTGCTCCACTCCACCTTGTTCTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR CCA 90 bp | GGAGTGGAGCACTGGACTTCCCCAGGAGTTAGGACTGTGCCTATCTGCAGAGAGCCTTCTGGGACAGTGTaGATGGTTGGGTCTGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GVEHWTSPGVRTVPICREPSGTV*MVGSVA Trigger: TGCCACAGACCCAACCATCCACACTGTCCCAGAAGG...CTCTCTGCAGATAGGCACAGTCCTAACTCCTGGGGAAGTCCAGTGCTCCACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR CCA 90 bp | GAATGCCCGAAGCAACTTGGAAGACCTAGACGCATCCAGGAATGGTCTGTGAGCCACGGGCCTGCCTTCTaGGACAGTGTGGATGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ECPKQLGRPRRIQEWSVSHGPAF*DSVDGW Trigger: CCAACCATCCACACTGTCCCAGAAGGCAGGCCCGTG...GCTCACAGACCATTCCTGGATGCGTCTAGGTCTTCCAAGTTGCTTCGGGCATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177320.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGGCTTGGTAGTTCTCAGATGCTGGCCAGAGAGTGGAGAAGGCTAGCCCACAATAGTAGCTGTCAATaGCCACCACGGGCACCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRLGSSQMLAREWRRLAHNSSCQ*PPRAPR Trigger: TCTTGGTGCCCGTGGTGGTCATTGACAGCTACTATT...GTGGGCTAGCCTTCTCCACTCTCTGGCCAGCATCTGAGAACTACCAAGCCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR GCA 90 bp | GGAGTGGAGCACTGGACTTCCCCAGGAGTTAGGACTGTGCCTATCTGCAGAGAGGGCCCAGACTTGCCCTaGTTTATTTCCAGACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVEHWTSPGVRTVPICREGPDLP*FISRLW Trigger: CCAGAGTCTGGAAATAAAGCAGGGCAAGTCTGGGCC...CTCTCTGCAGATAGGCACAGTCCTAACTCCTGGGGAAGTCCAGTGCTCCACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGAGAGTGGAGAAGGCTAGCCCACACCGAGTTAGGTCCTCTCGCAGTTTCTTCAGGGGCCCAGACTTaGCCTGCTTTATTTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AREWRRLAHTELGPLAVSSGAQT*PALFPD Trigger: GTCTGGAAATAAAGCAGGGCAAGTCTGGGCCCCTGA...AGAAACTGCGAGAGGACCTAACTCGGTGTGGGCTAGCCTTCTCCACTCTCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAGTGGAGCACTGGACTTCCCCAGGAGTTAGGACTGTGCCTATCTGCAGAGAAACTCTTCCACCTGTaGTTCCTGGCCAGCAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VEWSTGLPQELGLCLSAEKLFHL*FLASKS Trigger: CGACTTGCTGGCCAGGAAGCACAGGTGGAAGAGTTT...CTCTGCAGATAGGCACAGTCCTAACTCCTGGGGAAGTCCAGTGCTCCACTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR CCA 90 bp | AGACGCATCCAGGAATGGTCTGTGAGCCAGGCTGACCCACTCTTCTCTGTGGGAAAATCAAGGGGCCCGTaGTATCCTCTGAACAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRIQEWSVSQADPLFSVGKSRGP*YPLNRA Trigger: GGCTCTGTTCAGAGGATACCACGGGCCCCTTGATTT...TCCCACAGAGAAGAGTGGGTCAGCCTGGCTCACAGACCATTCCTGGATGCGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177320.2 |
||
| CDS-3UTR CCA 90 bp | CAACTTGGAAGACCTAGACGCATCCAGGAATGGTCTGTGAGCCAGGCTGACCCACCTTCTGGGACAGTGTaGATGGTTGGGTCTGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLGRPRRIQEWSVSQADPPSGTV*MVGSVA Trigger: TGCCACAGACCCAACCATCCACACTGTCCCAGAAGG...TGGGTCAGCCTGGCTCACAGACCATTCCTGGATGCGTCTAGGTCTTCCAAGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177320.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTGCTGCCGGGAAAAGGCCATATCTGGTTGGCAACTAGGCTGAGCTGCTTTTGCGCACAACCTCGCTaGGAGCAGACACTTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLLPGKGHIWLATRLSCFCAQPR*EQTLES Trigger: GCTTTCAAGTGTCTGCTCTCAGCGAGGTTGTGCGCA...AAAGCAGCTCAGCCTAGTTGCCAACCAGATATGGCCTTTTCCCGGCAGCAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR TCA 90 bp | GGTCGCCTTTTTCCTGAGCTTCAGGACAGTGTCAGTCCTGGGAACACTTTAGAAAGAACATGCCCGTGCTaGGCACCAGGAAGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRLFPELQDSVSPGNTLERTCPC*APGRPA Trigger: TGCTGGCCTTCCTGGTGCTCAGCACGGGCATGTTCT...TTCTAAAGTGTTCCCAGGACTGACACTGTCCTGAAGCTCAGGAAAAAGGCGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR TCA 90 bp | CAGATGCTGGCCAGAGAGTGGAGAAGGCTAGCCCACACCGAGTTAGGTCCTCTCACATACACCGTGTACTaGTCTGACAGGAAGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: QMLAREWRRLAHTELGPLTYTVY*SDRKGT Trigger: TGTTCCCTTCCTGTCAGATCAGTACACGGTGTATGT...GAGAGGACCTAACTCGGTGTGGGCTAGCCTTCTCCACTCTCTGGCCAGCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000175728.2 |
||
| CDS-3UTR CCA 90 bp | AGCACGTTCTACTCTTCTCCCTCCAGTGAGTACCTACATGGAGAACAAGGTGGAGAGTGGGAACAGTCCTaGTGGCCAGTGGTCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: STFYSSPSSEYLHGEQGGEWEQS*WPVVPL Trigger: CAGAGGGACCACTGGCCACCAGGACTGTTCCCACTC...TCCACCTTGTTCTCCATGTAGGTACTCACTGGAGGGAGAAGAGTAGAACGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000175728.2 |
||
| 3UTR CAA 72 bp | AGCCACGTCTTGCTGCCGGGAAAAGGCCATATCTGGTaGGCAACTAGGCTGAGCTGCTTTTCAGCAGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SHVLLPGKGHIW*ATRLSCFSAVG Trigger: TCCTACTGCTGAAAAGCAGCTCAGCCTAGTTGCCAACCAGATATGGCCTTTTCCCGGCAGCAAGACGTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAACAAGGTGGAGTGGAGCACTGGACTTCCCCAGGAGTTAGGACTGTGCCTTCTGATGGAATGAACTaGAGCTGCCAATTGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GEQGGVEHWTSPGVRTVPSDGMN*SCQLSG Trigger: GCCTGACAATTGGCAGCTTCAGTTCATTCCATCAGA...AGGCACAGTCCTAACTCCTGGGGAAGTCCAGTGCTCCACTCCACCTTGTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR TCA 90 bp | GGAGAACAAGGTGGAGTGGAGCACTGGACTTCCCCAGGAGTTAGGACTGTGCCTAAAGGCTTTGGTAGCTaGCCTCTGAACTCTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: GEQGGVEHWTSPGVRTVPKGFGS*PLNSDG Trigger: TCCATCAGAGTTCAGAGGTCAGCTACCAAAGCCTTT...AGGCACAGTCCTAACTCCTGGGGAAGTCCAGTGCTCCACTCCACCTTGTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000175728.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCGGGAAAAGGCCATATCTGGTTGGCAACTAGGCTGAGCTGCTTTTCAGCATCAGGGGCCCAGACTTaGCCTGCTTTATTTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPGKGHIWLATRLSCFSASGAQT*PALFPD Trigger: GTCTGGAAATAAAGCAGGGCAAGTCTGGGCCCCTGA...TGCTGAAAAGCAGCTCAGCCTAGTTGCCAACCAGATATGGCCTTTTCCCGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR GCA 90 bp | CAGATGCTGGCCAGAGAGTGGAGAAGGCTAGCCCACACCGAGTTAGGTCCTCTCATCATTCGACTCACATaGAGCCCAAACTTCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QMLAREWRRLAHTELGPLIIRLT*SPNFLH Trigger: GTGCAAGAAGTTTGGGCTGCATGTGAGTCGAATGAT...GAGAGGACCTAACTCGGTGTGGGCTAGCCTTCTCCACTCTCTGGCCAGCATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCGAAGCAACTTGGAAGACCTAGACGCATCCAGGAATGGTCTGTGAGCCAGTGTACATGCAGAAGCTaGTGGGGAGGAATGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: CPKQLGRPRRIQEWSVSQCTCRS*WGGMQM Trigger: CATCTGCATTCCTCCCCAGCAGCTTCTGCATGTACA...CTGGCTCACAGACCATTCCTGGATGCGTCTAGGTCTTCCAAGTTGCTTCGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| CDS-3UTR CCA 90 bp | CTTTATTACAGCTCTAACAGGATGCCTTGGAGGAAGTCGGCTCCGTGGAAGCCCTCATGGCGATCAGCGTaGTGTACATGCAGAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LYYSSNRMPWRKSAPWKPSWRSA*CTCRSC Trigger: GCAGCTTCTGCATGTACACCACGCTGATCGCCATGA...GGGCTTCCACGGAGCCGACTTCCTCCAAGGCATCCTGTTAGAGCTGTAATAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR CCA 90 bp | GGAGTGGAGCACTGGACTTCCCCAGGAGTTAGGACTGTGCCTATCTGCAGAGAGGACAGTGTGGATGGTTaGGTCTGTGGCAATTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GVEHWTSPGVRTVPICREDSVDG*VCGNSV Trigger: TACAGAATTGCCACAGACCCAACCATCCACACTGTC...CTCTCTGCAGATAGGCACAGTCCTAACTCCTGGGGAAGTCCAGTGCTCCACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR CCA 90 bp | CTTGGAAGACCTAGACGCATCCAGGAATGGTCTGTGAGCCAGGCTGACCCACTCGACAGTGTGGATGGTTaGGTCTGTGGCAATTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LGRPRRIQEWSVSQADPLDSVDG*VCGNSV Trigger: TACAGAATTGCCACAGACCCAACCATCCACACTGTC...GAGTGGGTCAGCCTGGCTCACAGACCATTCCTGGATGCGTCTAGGTCTTCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177320.2 |
||
| 3UTR CAA 72 bp | CAGTGTCAGTCCTGGGAACACTTTAGAAGCCACGTCTaGCTGCCGGGAAAAGGCCATATCTGGTTGGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: QCQSWEHFRSHV*LPGKGHIWLAT Trigger: AGTTGCCAACCAGATATGGCCTTTTCCCGGCAGCAAGACGTGGCTTCTAAAGTGTTCCCAGGACTGACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| 3UTR CAA 72 bp | CGGGGTGCTAACCTCCACTTTTCTTCCTGCTCGGCTTaGCTTTCCGAGGCTTCAGGATGGTGTAGTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: RGANLHFSSCSA*LSEASGWCSSH Trigger: ATGTGAACTACACCATCCTGAAGCCTCGGAAAGCAAAGCCGAGCAGGAAGAAAAGTGGAGGTTAGCACCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| CDS-3UTR TCA 90 bp | AGCACGTTCTACTCTTCTCCCTCCAGTGAGTACCTACATGGAGAACAAGGTGGATGCGCACAACCTCGCTaGGAGCAGACACTTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: STFYSSPSSEYLHGEQGGCAQPR*EQTLES Trigger: GCTTTCAAGTGTCTGCTCTCAGCGAGGTTGTGCGCA...TCCACCTTGTTCTCCATGTAGGTACTCACTGGAGGGAGAAGAGTAGAACGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR TCA 90 bp | CACTCTTGGTGGACGACCTTTATTACAGCTCTAACAGGATGCCTTGGAGGAAGTTGCAGAATCCGTGCATaGAATGCAGCTGGCCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HSWWTTFITALTGCLGGSCRIRA*NAAGQA Trigger: CGCCTGGCCAGCTGCATTTCATGCACGGATTCTGCA...ACTTCCTCCAAGGCATCCTGTTAGAGCTGTAATAAAGGTCGTCCACCAAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGAGAGTGGAGAAGGCTAGCCCACACCGAGTTAGGTCCTCTCGCAGTTTCTATCATTCGACTCACATaGAGCCCAAACTTCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AREWRRLAHTELGPLAVSIIRLT*SPNFLH Trigger: GTGCAAGAAGTTTGGGCTGCATGTGAGTCGAATGAT...AGAAACTGCGAGAGGACCTAACTCGGTGTGGGCTAGCCTTCTCCACTCTCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR CCA 90 bp | CAGGATGCCTTGGAGGAAGTCGGCTCCGTGGAAGCCCTAGTTAGCACAGGCTGTGATGAGGTAGTGTGTTaGTTCCCAGTAGTTGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: QDALEEVGSVEALVSTGCDEVVC*FPVVEC Trigger: ACATTCAACTACTGGGAACCAACACACTACCTCATC...ACAGCCTGTGCTAACTAGGGCTTCCACGGAGCCGACTTCCTCCAAGGCATCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR CCA 90 bp | GCTAGAAGTTGCCAAACAGCTCTGAGAGAGAAACCTTGTAGTCTAAGGGAGGCTTGCATGAAATGCAGCTaGCCAGGCGTGCAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARSCQTALREKPCSLREACMKCS*PGVQQQ Trigger: CTGCTGCTGCACGCCTGGCCAGCTGCATTTCATGCA...AGCCTCCCTTAGACTACAAGGTTTCTCTCTCAGAGCTGTTTGGCAACTTCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR CCA 90 bp | TGTCAGTCCTGGGAACACTTTAGAAGCCACGTCTTGCTGCCGGGAAAAGGCCATCTCCCAGCACAGCAATaGGTGTCTTGTCCATATACC | + |
|
Preference number: 4 (lower is better) Translates to: CQSWEHFRSHVLLPGKGHLPAQQ*VSCPYT Trigger: GGTATATGGACAAGACACCCATTGCTGTGCTGGGAG...ATGGCCTTTTCCCGGCAGCAAGACGTGGCTTCTAAAGTGTTCCCAGGACTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTTTCAGCAGTAGGATTTGAAGAAGGCCTGCTAGAAGTTGCCAAACAGCTCTGGGAACAGTCCTGGTaGCCAGTGGTCCCTCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: CFSAVGFEEGLLEVAKQLWEQSW*PVVPLR Trigger: TCGCAGAGGGACCACTGGCCACCAGGACTGTTCCCA...GAGCTGTTTGGCAACTTCTAGCAGGCCTTCTTCAAATCCTACTGCTGAAAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000175728.2 |
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| CDS-3UTR CCA 90 bp | TGCTTTTCAGCAGTAGGATTTGAAGAAGGCCTGCTAGAAGTTGCCAAACAGCTCGAGTGGGAACAGTCCTaGTGGCCAGTGGTCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CFSAVGFEEGLLEVAKQLEWEQS*WPVVPL Trigger: CAGAGGGACCACTGGCCACCAGGACTGTTCCCACTC...GAGCTGTTTGGCAACTTCTAGCAGGCCTTCTTCAAATCCTACTGCTGAAAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000175728.2 |
||
| CDS-3UTR TCA 90 bp | CTCTCGCAGTTTCTGCAAGCACGTTCTACTCTTCTCCCTCCAGTGAGTACCTACCTGAGAGCAGACACTTaGAAGCAGTGGATCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSQFLQARSTLLPPVSTYLRADT*KQWILQ Trigger: CTGAAGGATCCACTGCTTTCAAGTGTCTGCTCTCAG...GTAGGTACTCACTGGAGGGAGAAGAGTAGAACGTGCTTGCAGAAACTGCGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
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| CDS-3UTR GCA 90 bp | GGTCGCCTTTTTCCTGAGCTTCAGGACAGTGTCAGTCCTGGGAACACTTTAGAAGGCCCAGACTTGCCCTaGTTTATTTCCAGACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRLFPELQDSVSPGNTLEGPDLP*FISRLW Trigger: CCAGAGTCTGGAAATAAAGCAGGGCAAGTCTGGGCC...TTCTAAAGTGTTCCCAGGACTGACACTGTCCTGAAGCTCAGGAAAAAGGCGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCGCAGTTTCTGCAAGCACGTTCTACTCTTCTCCCTCCAGTGAGTACCTACTGTACATGCAGAAGCTaGTGGGGAGGAATGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LSQFLQARSTLLPPVSTYCTCRS*WGGMQM Trigger: CATCTGCATTCCTCCCCAGCAGCTTCTGCATGTACA...GTAGGTACTCACTGGAGGGAGAAGAGTAGAACGTGCTTGCAGAAACTGCGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
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| CDS-3UTR CCA 90 bp | GTGGAGTGGAGCACTGGACTTCCCCAGGAGTTAGGACTGTGCCTATCTGCAGAGGATGAGGTAGTGTGTTaGTTCCCAGTAGTTGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VEWSTGLPQELGLCLSAEDEVVC*FPVVEC Trigger: ACATTCAACTACTGGGAACCAACACACTACCTCATC...CTCTGCAGATAGGCACAGTCCTAACTCCTGGGGAAGTCCAGTGCTCCACTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGCCATATCTGGTTGGCAACTAGGCTGAGCTGCTTTTCAGCAGTAGGATTTTCCACCTGTGCTTCCTaGCCAGCAAGTCGAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KGHIWLATRLSCFSAVGFSTCAS*PASRRR Trigger: TCGCCTTCGACTTGCTGGCCAGGAAGCACAGGTGGA...AAATCCTACTGCTGAAAAGCAGCTCAGCCTAGTTGCCAACCAGATATGGCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR CCA 90 bp | CTTGGAAGACCTAGACGCATCCAGGAATGGTCTGTGAGCCAGGCTGACCCACTCGGATGGTTGGGTCTGTaGCAATTCTGTAAAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGRPRRIQEWSVSQADPLGWLGL*QFCKIL Trigger: CAGAATTTTACAGAATTGCCACAGACCCAACCATCC...GAGTGGGTCAGCCTGGCTCACAGACCATTCCTGGATGCGTCTAGGTCTTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177320.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCGAAGCAACTTGGAAGACCTAGACGCATCCAGGAATGGTCTGTGAGCCAGGCAGAAGGAAGCTACTaGGAAATCGATACCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CPKQLGRPRRIQEWSVSQAEGSY*EIDTTL Trigger: AAGAGTGGTATCGATTTCCCAGTAGCTTCCTTCTGC...CTGGCTCACAGACCATTCCTGGATGCGTCTAGGTCTTCCAAGTTGCTTCGGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177320.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGGTTGGCAACTAGGCTGAGCTGCTTTTCAGCAGTAGGATTTGAAGAAGGCAGACGCATCCAGGAATaGTCTGTGAGCCAGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IWLATRLSCFSAVGFEEGRRIQE*SVSQAD Trigger: GTCAGCCTGGCTCACAGACCATTCCTGGATGCGTCT...GCCTTCTTCAAATCCTACTGCTGAAAAGCAGCTCAGCCTAGTTGCCAACCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR TCA 90 bp | CTTTATTACAGCTCTAACAGGATGCCTTGGAGGAAGTCGGCTCCGTGGAAGCCCTTGGTTCCCAGTAGTTaGATGTTTCATCACAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LYYSSNRMPWRKSAPWKPLVPSS*MFHHSP Trigger: CGGACTGTGATGAAACATTCAACTACTGGGAACCAA...GGGCTTCCACGGAGCCGACTTCCTCCAAGGCATCCTGTTAGAGCTGTAATAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR TCA 90 bp | CAACTTGGAAGACCTAGACGCATCCAGGAATGGTCTGTGAGCCAGGCTGACCCAAGTAATGGCATTTGCTaGTGTCAATTTGTCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLGRPRRIQEWSVSQADPSNGIC*CQFVRQ Trigger: CTGCCTGACAAATTGACATCAGCAAATGCCATTACT...TGGGTCAGCCTGGCTCACAGACCATTCCTGGATGCGTCTAGGTCTTCCAAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177320.2 |
||
| CDS-3UTR GCA 90 bp | TGTCAGTCCTGGGAACACTTTAGAAGCCACGTCTTGCTGCCGGGAAAAGGCCATGTAGCATTTCTGAAGTaGAGAAAGAGCAACAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: CQSWEHFRSHVLLPGKGHVAFLK*RKSNST Trigger: GGTGCTGTTGCTCTTTCTGCACTTCAGAAATGCTAC...ATGGCCTTTTCCCGGCAGCAAGACGTGGCTTCTAAAGTGTTCCCAGGACTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR CCA 90 bp | CCGTGTACTGATCTGACAGGAAGGGAACATAGAATGCCCGAAGCAACTTGGAAGCTCCCAGCACAGCAATaGGTGTCTTGTCCATATACC | + |
|
Preference number: 4 (lower is better) Translates to: PCTDLTGREHRMPEATWKLPAQQ*VSCPYT Trigger: GGTATATGGACAAGACACCCATTGCTGTGCTGGGAG...CTTCCAAGTTGCTTCGGGCATTCTATGTTCCCTTCCTGTCAGATCAGTACACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| CDS-3UTR CCA 90 bp | CCTGAGCTTCAGGACAGTGTCAGTCCTGGGAACACTTTAGAAGCCACGTCTTGCGCAGAAGGAAGCTACTaGGAAATCGATACCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PELQDSVSPGNTLEATSCAEGSY*EIDTTL Trigger: AAGAGTGGTATCGATTTCCCAGTAGCTTCCTTCTGC...GCAAGACGTGGCTTCTAAAGTGTTCCCAGGACTGACACTGTCCTGAAGCTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR TCA 90 bp | CTCTTGGTGGACGACCTTTATTACAGCTCTAACAGGATGCCTTGGAGGAAGTCGAAAGGCTTTGGTAGCTaGCCTCTGAACTCTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLVDDLYYSSNRMPWRKSKGFGS*PLNSDG Trigger: TCCATCAGAGTTCAGAGGTCAGCTACCAAAGCCTTT...CGACTTCCTCCAAGGCATCCTGTTAGAGCTGTAATAAAGGTCGTCCACCAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000175728.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCGCAGTTTCTGCAAGCACGTTCTACTCTTCTCCCTCCAGTGAGTACCTACGAAGGGAACATAGAATaGCCGAAGCAACTTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSQFLQARSTLLPPVSTYEGNIE*PKQLGR Trigger: TCTTCCAAGTTGCTTCGGGCATTCTATGTTCCCTTC...GTAGGTACTCACTGGAGGGAGAAGAGTAGAACGTGCTTGCAGAAACTGCGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000175728.2 |
||
| 3UTR CAA 72 bp | GTTGGACGTCACCGTGTAATGCTCCAGGCGGTATCGTaGAAACACAAAGTGGTAGCATTTCTGAAGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGRHRVMLQAVS*KHKVVAFLKCR Trigger: TCTGCACTTCAGAAATGCTACCACTTTGTGTTTCAACGATACCGCCTGGAGCATTACACGGTGACGTCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| CDS-3UTR TCA 90 bp | CACTCTTGGTGGACGACCTTTATTACAGCTCTAACAGGATGCCTTGGAGGAAGTACATACACCGTGTACTaGTCTGACAGGAAGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: HSWWTTFITALTGCLGGSTYTVY*SDRKGT Trigger: TGTTCCCTTCCTGTCAGATCAGTACACGGTGTATGT...ACTTCCTCCAAGGCATCCTGTTAGAGCTGTAATAAAGGTCGTCCACCAAGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000175728.2 |
||
| CDS-3UTR GCA 90 bp | GGTCGCCTTTTTCCTGAGCTTCAGGACAGTGTCAGTCCTGGGAACACTTTAGAAGAAGGGAACATAGAATaGCCGAAGCAACTTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRLFPELQDSVSPGNTLEEGNIE*PKQLGR Trigger: TCTTCCAAGTTGCTTCGGGCATTCTATGTTCCCTTC...TTCTAAAGTGTTCCCAGGACTGACACTGTCCTGAAGCTCAGGAAAAAGGCGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR CCA 90 bp | ATCTGGTTGGCAACTAGGCTGAGCTGCTTTTCAGCAGTAGGATTTGAAGAAGGCTATGAGCGGATAGACTaGGAAGAGAAAGCGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IWLATRLSCFSAVGFEEGYERID*EEKALF Trigger: GAAGAGCGCTTTCTCTTCCCAGTCTATCCGCTCATA...GCCTTCTTCAAATCCTACTGCTGAAAAGCAGCTCAGCCTAGTTGCCAACCAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR CCA 90 bp | TTGCTGCCGGGAAAAGGCCATATCTGGTTGGCAACTAGGCTGAGCTGCTTTTCAGGATGGTTGGGTCTGTaGCAATTCTGTAAAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLPGKGHIWLATRLSCFSGWLGL*QFCKIL Trigger: CAGAATTTTACAGAATTGCCACAGACCCAACCATCC...TGAAAAGCAGCTCAGCCTAGTTGCCAACCAGATATGGCCTTTTCCCGGCAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR TCA 90 bp | ACTTCCCCAGGAGTTAGGACTGTGCCTATCTGCAGAGAGCTCACATGCAGAACAAGTAATGGCATTTGCTaGTGTCAATGTATCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSPGVRTVPICRELTCRTSNGIC*CQCIWK Trigger: CTTCCAGATACATTGACATCAGCAAATGCCATTACT...TGTTCTGCATGTGAGCTCTCTGCAGATAGGCACAGTCCTAACTCCTGGGGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR CCA 90 bp | CTCTCGCAGTTTCTGCAAGCACGTTCTACTCTTCTCCCTCCAGTGAGTACCTACGAGGTGTTTCTCTCATaGTATCCAAATCCACTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSQFLQARSTLLPPVSTYEVFLS*YPNPLS Trigger: ACTTAGTGGATTTGGATACCATGAGAGAAACACCTC...GTAGGTACTCACTGGAGGGAGAAGAGTAGAACGTGCTTGCAGAAACTGCGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR CCA 90 bp | CACTCTTGGTGGACGACCTTTATTACAGCTCTAACAGGATGCCTTGGAGGAAGTAAACCAAATATACATTaGCGCCAAGGTCAGCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: HSWWTTFITALTGCLGGSKPNIH*RQGQPI Trigger: TATTGGCTGACCTTGGCGCCAATGTATATTTGGTTT...ACTTCCTCCAAGGCATCCTGTTAGAGCTGTAATAAAGGTCGTCCACCAAGAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCATTAAATAATATGATTAGGTCACAGTTCTTCAGTGGTCGCCTTTTTAAATCAAGGGGCCCGTaGTATCCTCTGAACAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KASLNNMIRSQFFSGRLFKSRGP*YPLNRA Trigger: GGCTCTGTTCAGAGGATACCACGGGCCCCTTGATTT...AAAAAGGCGACCACTGAAGAACTGTGACCTAATCATATTATTTAATGATGCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR TCA 90 bp | TTAAAGGCATCATTAAATAATATGATTAGGTCACAGTTCTTCAGTGGTCGCCTTGGGTGTCCTAAATTCTaGACATGGAACCTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKASLNNMIRSQFFSGRLGCPKF*TWNLCS Trigger: GCTGCAGAGGTTCCATGTTCAGAATTTAGGACACCC...AAGGCGACCACTGAAGAACTGTGACCTAATCATATTATTTAATGATGCCTTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR TCA 90 bp | TTAAAGGCATCATTAAATAATATGATTAGGTCACAGTTCTTCAGTGGTCGCCTTTATACAAAACAATGTTaGGAGGGGCAACCACCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LKASLNNMIRSQFFSGRLYTKQC*EGQPPT Trigger: AGTTGGTGGTTGCCCCTCTCAACATTGTTTTGTATA...AAGGCGACCACTGAAGAACTGTGACCTAATCATATTATTTAATGATGCCTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS GCA 90 bp | CTTTATTTCCAGACTCTGGCCGCGGCTCTGCGCCTGCCTCCCGGCTaGCGAGCTGTTCCAGCTTCTCCGCCGCCGGGCCCGCATCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LYFQTLAAALRLPPG*RAVPASPPPGPHPH Trigger: GTGGGGATGCGGGCCCGGCGGCGGAGAAGCTGGAACAGCTCGGCAGCCGGGAGGCAGGCGCAGAGCCGCGGCCAGAGTCTGGAAATAAAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 ENSMUST00000162073.8 |
||
| CDS GCA 90 bp | GACTTGCCCTGCTTTATTTCCAGACTCTGGCCGCGGCTCTGCGCCTaGCTCCCGGCTGCCGAGCTGTTCCAGCTTCTCCGCCGCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DLPCFISRLWPRLCA*LPAAELFQLLRRRA Trigger: GGCCCGGCGGCGGAGAAGCTGGAACAGCTCGGCAGCCGGGAGGCAGGCGCAGAGCCGCGGCCAGAGTCTGGAAATAAAGCAGGGCAAGTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 ENSMUST00000162073.8 |
||
| CDS GCA 90 bp | CAGACACTTGAAAGCAGTGGATCCTTCAGGGGCCCAGACTTGCCCTaGTTTATTTCCAGACTCTGGCCGCGGCTCTGCGCCTGCCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QTLESSGSFRGPDLP*FISRLWPRLCACLP Trigger: CGGGAGGCAGGCGCAGAGCCGCGGCCAGAGTCTGGAAATAAAGCAGGGCAAGTCTGGGCCCCTGAAGGATCCACTGCTTTCAAGTGTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 ENSMUST00000162073.8 |
||
| CDS CCA 90 bp | ACGGCCACCCTAAGATGGCACCAGCTGCTACTCCCAGCACAGCAATaGGTGTCTTGTCCATATACCATCCCGTCATGGCGATCAGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TATLRWHQLLLPAQQ*VSCPYTIPSWRSAW Trigger: CCACGCTGATCGCCATGACGGGATGGTATATGGACAAGACACCCATTGCTGTGCTGGGAGTAGCAGCTGGTGCCATCTTAGGGTGGCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS TCA 90 bp | ATCACAGTCCGAGATGTTGCTCAGAAGGGCTGCGCACAACCTCGCTaGGAGCAGACACTTGAAAGCAGTGGATCCTTCAGGGGCCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ITVRDVAQKGCAQPR*EQTLESSGSFRGPD Trigger: GTCTGGGCCCCTGAAGGATCCACTGCTTTCAAGTGTCTGCTCTCAGCGAGGTTGTGCGCAGCCCTTCTGAGCAACATCTCGGACTGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 ENSMUST00000162073.8 |
||
| CDS TCA 90 bp | AGCTGCTGGGGAGGAATGCAGATGATGAGCAGAACATGCCCGTGCTaGGCACCAGGAAGGCCAGCATCATTCGACTCACATGCAGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SCWGGMQMMSRTCPC*APGRPASFDSHAAQ Trigger: TTGGGCTGCATGTGAGTCGAATGATGCTGGCCTTCCTGGTGCTCAGCACGGGCATGTTCTGCTCATCATCTGCATTCCTCCCCAGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 ENSMUST00000162073.8 |
||
| CDS CCA 90 bp | ATGCAGCTGGCCAGGCGTGCAGCAGCAGGTAAGCATATGAGCGGATaGCATACACGGGGGAATATTCCCATGTCTGGAATCCCTTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: MQLARRAAAGKHMSG*HTRGNIPMSGIPSR Trigger: ACGGGAAGGGATTCCAGACATGGGAATATTCCCCCGTGTATGCCATCCGCTCATATGCTTACCTGCTGCTGCACGCCTGGCCAGCTGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 ENSMUST00000162073.8 |
||
| CDS CCA 90 bp | CTCCCAGCACAGCAATGGGTGTCTTGTCCATATACCATCCCGTCATaGCGATCAGCGTGGTGTACATGCAGAAGCTGCTGGGGAGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: LPAQQWVSCPYTIPS*RSAWCTCRSCWGGM Trigger: CATTCCTCCCCAGCAGCTTCTGCATGTACACCACGCTGATCGCCATGACGGGATGGTATATGGACAAGACACCCATTGCTGTGCTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS TCA 90 bp | TGCATGAAATGCAGCTGGCCAGGCGTGCAGCAGCAGGTAAGCATATaGGCGGATGGCATACACGGGGGAATATTCCCATGTCTGGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: CMKCSWPGVQQQVSI*ADGIHGGIFPCLES Trigger: GGATTCCAGACATGGGAATATTCCCCCGTGTATGCCATCCGCTCATATGCTTACCTGCTGCTGCACGCCTGGCCAGCTGCATTTCATGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 ENSMUST00000162073.8 |
||
| CDS-3UTR CAA 90 bp | AGACGCATCCAGGAATGGTCTGTGAGCCAGGCTGACCCACTCTTCTCTGTGGGACTCCAGGCGGTATCGTaGAAACACAAAGTGGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRIQEWSVSQADPLFSVGLQAVS*KHKVVA Trigger: TGCTACCACTTTGTGTTTCAACGATACCGCCTGGAG...TCCCACAGAGAAGAGTGGGTCAGCCTGGCTCACAGACCATTCCTGGATGCGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177320.2 |
||
| CDS CCA 90 bp | CAATGGGTGTCTTGTCCATATACCATCCCGTCATGGCGATCAGCGTaGTGTACATGCAGAAGCTGCTGGGGAGGAATGCAGATGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QWVSCPYTIPSWRSA*CTCRSCWGGMQMMS Trigger: GCTCATCATCTGCATTCCTCCCCAGCAGCTTCTGCATGTACACCACGCTGATCGCCATGACGGGATGGTATATGGACAAGACACCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR CAA 90 bp | ATGGAGAACAAGGTGGAGTGGAGCACTGGACTTCCCCAGGAGTTAGGACTGTGCGCTGAGAGCAGACACTaGAAAGCAGTGGATCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: MENKVEWSTGLPQELGLCAESRH*KAVDPS Trigger: TGAAGGATCCACTGCTTTCAAGTGTCTGCTCTCAGC...GCACAGTCCTAACTCCTGGGGAAGTCCAGTGCTCCACTCCACCTTGTTCTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS GCA 90 bp | TCTTGTCCATATACCATCCCGTCATGGCGATCAGCGTGGTGTACATaGAGAAGCTGCTGGGGAGGAATGCAGATGATGAGCAGAACATGC | + |
|
Preference number: 5 (lower is better) Translates to: SCPYTIPSWRSAWCT*RSCWGGMQMMSRTC Trigger: GCATGTTCTGCTCATCATCTGCATTCCTCCCCAGCAGCTTCTGCATGTACACCACGCTGATCGCCATGACGGGATGGTATATGGACAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS CCA 90 bp | CAGGAAGGGAACATAGAATGCCCGAAGCAACTTGGAAGACGTATCTaGAAGGCTCCTCTCGGTTCTGGTCGTTCATGTGAGTGGGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: QEGNIECPKQLGRRI*KAPLGSGRSCEWEQ Trigger: CTGTTCCCACTCACATGAACGACCAGAACCGAGAGGAGCCTTCCAGATACGTCTTCCAAGTTGCTTCGGGCATTCTATGTTCCCTTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175728.2 |
||
| CDS-3UTR CAA 90 bp | CTGCCGGGAAAAGGCCATATCTGGTTGGCAACTAGGCTGAGCTGCTTTTCAGCAGCTGAGAGCAGACACTaGAAAGCAGTGGATCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPGKGHIWLATRLSCFSAAESRH*KAVDPS Trigger: TGAAGGATCCACTGCTTTCAAGTGTCTGCTCTCAGC...TGCTGAAAAGCAGCTCAGCCTAGTTGCCAACCAGATATGGCCTTTTCCCGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCGCAGTTTCTGCAAGCACGTTCTACTCTTCTCCCTCCAGTGAGTACCTACACAGCAATGGGTGTCTaGTCCATATACCATCCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSQFLQARSTLLPPVSTYTAMGV*SIYHPV Trigger: GACGGGATGGTATATGGACAAGACACCCATTGCTGT...GTAGGTACTCACTGGAGGGAGAAGAGTAGAACGTGCTTGCAGAAACTGCGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR CAA 90 bp | ACTTCCCCAGGAGTTAGGACTGTGCCTATCTGCAGAGAGCTCACATGCAGAACACTCCAGGCGGTATCGTaGAAACACAAAGTGGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TSPGVRTVPICRELTCRTLQAVS*KHKVVA Trigger: TGCTACCACTTTGTGTTTCAACGATACCGCCTGGAG...TGTTCTGCATGTGAGCTCTCTGCAGATAGGCACAGTCCTAACTCCTGGGGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS-3UTR CAA 90 bp | CTCTCGCAGTTTCTGCAAGCACGTTCTACTCTTCTCCCTCCAGTGAGTACCTACAATGCCCGAAGCAACTaGGAAGACGTATCTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSQFLQARSTLLPPVSTYNARSN*EDVSGR Trigger: CCTTCCAGATACGTCTTCCAAGTTGCTTCGGGCATT...GTAGGTACTCACTGGAGGGAGAAGAGTAGAACGTGCTTGCAGAAACTGCGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175728.2 |
||
| CDS TCA 90 bp | CCGAGGCTTCAGGATGGTGTAGTTCACATACACCGTGTACTGATCTaGCAGGAAGGGAACATAGAATGCCCGAAGCAACTTGGAAGACGT | + |
|
Preference number: 5 (lower is better) Translates to: PRLQDGVVHIHRVLI*QEGNIECPKQLGRR Trigger: ACGTCTTCCAAGTTGCTTCGGGCATTCTATGTTCCCTTCCTGTCAGATCAGTACACGGTGTATGTGAACTACACCATCCTGAAGCCTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175728.2 |
||
| CDS-3UTR CAA 90 bp | AGACCTAGACGCATCCAGGAATGGTCTGTGAGCCAGGCTGACCCACTCTTCTCTTTTGCTGATGTCAATTaGTCAGGCAGAAGGAAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RPRRIQEWSVSQADPLFSFADVN*SGRRKL Trigger: TAGCTTCCTTCTGCCTGACAAATTGACATCAGCAAA...AGAGAAGAGTGGGTCAGCCTGGCTCACAGACCATTCCTGGATGCGTCTAGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177320.2 |
||
| CDS-3UTR CAA 90 bp | AGGCCTGCTAGAAGTTGCCAAACAGCTCTGAGAGAGAAACCTTGTAGTCTAAGGACAGCAATGGGTGTCTaGTCCATATACCATCCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: RPARSCQTALREKPCSLRTAMGV*SIYHPV Trigger: GACGGGATGGTATATGGACAAGACACCCATTGCTGT...CCTTAGACTACAAGGTTTCTCTCTCAGAGCTGTTTGGCAACTTCTAGCAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS-3UTR CAA 90 bp | CCTGAGCTTCAGGACAGTGTCAGTCCTGGGAACACTTTAGAAGCCACGTCTTGCTTATACAAAACAATGTaGAGAGGGGCAACCACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PELQDSVSPGNTLEATSCLYKTM*RGATTN Trigger: GTTGGTGGTTGCCCCTCTCAACATTGTTTTGTATAA...GCAAGACGTGGCTTCTAAAGTGTTCCCAGGACTGACACTGTCCTGAAGCTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS GCA 90 bp | TCTCAAAAAGTAGAATACAAGAATCTTGTTAGTCTGCAGAATCCGTaGATGAAATGCAGCTGGCCAGGCGTGCAGCAGCAGGTAAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: SQKVEYKNLVSLQNP*MKCSWPGVQQQVSI Trigger: TATGCTTACCTGCTGCTGCACGCCTGGCCAGCTGCATTTCATGCACGGATTCTGCAGACTAACAAGATTCTTGTATTCTACTTTTTGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCATCATTAAATAATATGATTAGGTCACAGTTCTTCAGTGGTCGCCTTTTTAAAGCAAAGGCAACATaGAAGTTCAGAAATCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: KASLNNMIRSQFFSGRLFKAKAT*KFRNPL Trigger: CAATGGATTTCTGAACTTCAATGTTGCCTTTGCTTT...AAAAAGGCGACCACTGAAGAACTGTGACCTAATCATATTATTTAATGATGCCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034561.11 |
||
| CDS GCA 72 bp | CAGACTCTGGCCGCGGCTCTGCGCCTGCCTCCCGGCTaGCGAGCTGTTCCAGCTTCTCCGCCGCCGGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: QTLAAALRLPPG*RAVPASPPPGP Trigger: CGGGCCCGGCGGCGGAGAAGCTGGAACAGCTCGGCAGCCGGGAGGCAGGCGCAGAGCCGCGGCCAGAGTCTG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 ENSMUST00000162073.8 |
||
| CDS GCA 72 bp | TGCTTTATTTCCAGACTCTGGCCGCGGCTCTGCGCCTaGCTCCCGGCTGCCGAGCTGTTCCAGCTTCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: CFISRLWPRLCA*LPAAELFQLLR Trigger: GCGGAGAAGCTGGAACAGCTCGGCAGCCGGGAGGCAGGCGCAGAGCCGCGGCCAGAGTCTGGAAATAAAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 ENSMUST00000162073.8 |
||
| CDS TCA 72 bp | GAAGGGCTGCGCACAACCTCGCTGAGAGCAGACACTTaGAAGCAGTGGATCCTTCAGGGGCCCAGACTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: EGLRTTSLRADT*KQWILQGPRLA Trigger: GGCAAGTCTGGGCCCCTGAAGGATCCACTGCTTTCAAGTGTCTGCTCTCAGCGAGGTTGTGCGCAGCCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 ENSMUST00000162073.8 |
||
| CDS CAA 72 bp | AGAAGGGCTGCGCACAACCTCGCTGAGAGCAGACACTaGAAAGCAGTGGATCCTTCAGGGGCCCAGACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRAAHNLAESRH*KAVDPSGAQTC Trigger: GCAAGTCTGGGCCCCTGAAGGATCCACTGCTTTCAAGTGTCTGCTCTCAGCGAGGTTGTGCGCAGCCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 ENSMUST00000162073.8 |
||
| CDS TCA 72 bp | TGCAGCTGGCCAGGCGTGCAGCAGCAGGTAAGCATATaGGCGGATGGCATACACGGGGGAATATTCCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: CSWPGVQQQVSI*ADGIHGGIFPC Trigger: ACATGGGAATATTCCCCCGTGTATGCCATCCGCTCATATGCTTACCTGCTGCTGCACGCCTGGCCAGCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 ENSMUST00000162073.8 |
||
| CDS CAA 90 bp | ATGTTGCTCAGAAGGGCTGCGCACAACCTCGCTGAGAGCAGACACTaGAAAGCAGTGGATCCTTCAGGGGCCCAGACTTGCCCTGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: MLLRRAAHNLAESRH*KAVDPSGAQTCPAL Trigger: TAAAGCAGGGCAAGTCTGGGCCCCTGAAGGATCCACTGCTTTCAAGTGTCTGCTCTCAGCGAGGTTGTGCGCAGCCCTTCTGAGCAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 ENSMUST00000162073.8 |
||
| CDS TCA 72 bp | CGAGATGTTGCTCAGAAGGGCTGCGCACAACCTCGCTaGGAGCAGACACTTGAAAGCAGTGGATCCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RDVAQKGCAQPR*EQTLESSGSFR Trigger: CCTGAAGGATCCACTGCTTTCAAGTGTCTGCTCTCAGCGAGGTTGTGCGCAGCCCTTCTGAGCAACATCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 ENSMUST00000162073.8 |
||
| CDS GCA 72 bp | CCGTCATGGCGATCAGCGTGGTGTACATGCAGAAGCTaGTGGGGAGGAATGCAGATGATGAGCAGAACATGC | + |
|
Preference number: 6 (lower is better) Translates to: PSWRSAWCTCRS*WGGMQMMSRTC Trigger: GCATGTTCTGCTCATCATCTGCATTCCTCCCCAGCAGCTTCTGCATGTACACCACGCTGATCGCCATGACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS GCA 72 bp | TTCTTGCACACAGCCCTTGTTAGTCTGCAGAATCCGTaGATGAAATGCAGCTGGCCAGGCGTGCAGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FLHTALVSLQNP*MKCSWPGVQQQ Trigger: CTGCTGCTGCACGCCTGGCCAGCTGCATTTCATGCACGGATTCTGCAGACTAACAAGGGCTGTGTGCAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| CDS CCA 72 bp | GCCAGGCGTGCAGCAGCAGGTAAGCATATGAGCGGATaGCATACACGGGGGAATATTCCCATGTCTGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: ARRAAAGKHMSG*HTRGNIPMSGI Trigger: GATTCCAGACATGGGAATATTCCCCCGTGTATGCCATCCGCTCATATGCTTACCTGCTGCTGCACGCCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 ENSMUST00000162073.8 |
||
| CDS CAA 90 bp | CCTAAGATGGCACCAGCTGCTACTCCCAGCACAGCAATGGGTGTCTaGTCCATATACCATCCCGTCATGGCGATCAGCGTGGTGTACATG | + |
|
Preference number: 6 (lower is better) Translates to: PKMAPAATPSTAMGV*SIYHPVMAISVVYM Trigger: CATGTACACCACGCTGATCGCCATGACGGGATGGTATATGGACAAGACACCCATTGCTGTGCTGGGAGTAGCAGCTGGTGCCATCTTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS TCA 72 bp | GGAGGAATGCAGATGATGAGCAGAACATGCCCGTGCTaGGCACCAGGAAGGCCAGCATCATTCGACTCACAT | + |
|
Preference number: 6 (lower is better) Translates to: GGMQMMSRTCPC*APGRPASFDSH Trigger: ATGTGAGTCGAATGATGCTGGCCTTCCTGGTGCTCAGCACGGGCATGTTCTGCTCATCATCTGCATTCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 ENSMUST00000162073.8 |
||
| CDS GCA 72 bp | TATACCATCCCGTCATGGCGATCAGCGTGGTGTACATaGAGAAGCTGCTGGGGAGGAATGCAGATGATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: YTIPSWRSAWCT*RSCWGGMQMMS Trigger: GCTCATCATCTGCATTCCTCCCCAGCAGCTTCTGCATGTACACCACGCTGATCGCCATGACGGGATGGTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS GCA 72 bp | ACAGCCCTTGTTAGTCTGCAGAATCCGTGCATGAAATaGAGCTGGCCAGGCGTGCAGCAGCAGGTAAGCATA | + |
|
Preference number: 6 (lower is better) Translates to: TALVSLQNPCMK*SWPGVQQQVSI Trigger: TATGCTTACCTGCTGCTGCACGCCTGGCCAGCTGCATTTCATGCACGGATTCTGCAGACTAACAAGGGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162073.8 |
||
| CDS CCA 72 bp | TCTTGTCCATATACCATCCCGTCATGGCGATCAGCGTaGTGTACATGCAGAAGCTGCTGGGGAGGAATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SCPYTIPSWRSA*CTCRSCWGGMQ Trigger: CTGCATTCCTCCCCAGCAGCTTCTGCATGTACACCACGCTGATCGCCATGACGGGATGGTATATGGACAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS CCA 72 bp | CAGCAATGGGTGTCTTGTCCATATACCATCCCGTCATaGCGATCAGCGTGGTGTACATGCAGAAGCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QQWVSCPYTIPS*RSAWCTCRSCW Trigger: CCAGCAGCTTCTGCATGTACACCACGCTGATCGCCATGACGGGATGGTATATGGACAAGACACCCATTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS CCA 72 bp | CTAAGATGGCACCAGCTGCTACTCCCAGCACAGCAATaGGTGTCTTGTCCATATACCATCCCGTCATGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LRWHQLLLPAQQ*VSCPYTIPSWR Trigger: TCGCCATGACGGGATGGTATATGGACAAGACACCCATTGCTGTGCTGGGAGTAGCAGCTGGTGCCATCTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000162073.8 |
||
| CDS CAA 90 bp | CATCATTCGACTCACATGCAGCCCAAACTTCTTGCACACAGCCTCTaGGCACAGAAGAAAACCCTGAGGGCCAGCAGAAAGAATGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: HHSTHMQPKLLAHSL*AQKKTLRASRKNGN Trigger: GTTTCCATTCTTTCTGCTGGCCCTCAGGGTTTTCTTCTGTGCCAAGAGGCTGTGTGCAAGAAGTTTGGGCTGCATGTGAGTCGAATGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159576.2 |
||
| CDS GCA 72 bp | AAGAATCTTGTTAGTCTGCAGAATCCGTGCATGAAATaGAGCTGGCCAGGCGTGCAGCAGCAGGTAAGCATA | + |
|
Preference number: 6 (lower is better) Translates to: KNLVSLQNPCMK*SWPGVQQQVSI Trigger: TATGCTTACCTGCTGCTGCACGCCTGGCCAGCTGCATTTCATGCACGGATTCTGCAGACTAACAAGATTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 |
||
| CDS GCA 72 bp | GTAGAATACAAGAATCTTGTTAGTCTGCAGAATCCGTaGATGAAATGCAGCTGGCCAGGCGTGCAGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: VEYKNLVSLQNP*MKCSWPGVQQQ Trigger: CTGCTGCTGCACGCCTGGCCAGCTGCATTTCATGCACGGATTCTGCAGACTAACAAGATTCTTGTATTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034561.11 ENSMUST00000159576.2 |
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| CDS CCA 72 bp | AACATAGAATGCCCGAAGCAACTTGGAAGACGTATCTaGAAGGCTCCTCTCGGTTCTGGTCGTTCATGTGAG | + |
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Preference number: 6 (lower is better) Translates to: NIECPKQLGRRI*KAPLGSGRSCE Trigger: CTCACATGAACGACCAGAACCGAGAGGAGCCTTCCAGATACGTCTTCCAAGTTGCTTCGGGCATTCTATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175728.2 |
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| CDS TCA 72 bp | TTCTTGCACACAGCCTCTTGGCACAGAAGAAAACCCTaGGGGCCAGCAGAAAGAATGGAAACAGACAACCTA | + |
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Preference number: 6 (lower is better) Translates to: FLHTASWHRRKP*GPAERMETDNL Trigger: TAGGTTGTCTGTTTCCATTCTTTCTGCTGGCCCTCAGGGTTTTCTTCTGTGCCAAGAGGCTGTGTGCAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159576.2 |
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| CDS CCA 72 bp | TTGCTGATGTCAATTTGTCAGGCAGAAGGAAGCTACTaGGAAATCGATACCACTCTTTTCCCACACAGACGT | + |
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Preference number: 6 (lower is better) Translates to: LLMSICQAEGSY*EIDTTLFPHRR Trigger: ACGTCTGTGTGGGAAAAGAGTGGTATCGATTTCCCAGTAGCTTCCTTCTGCCTGACAAATTGACATCAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177320.2 |
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| CDS CCA 72 bp | AAGAATGGAAACAGACAACCTAGGGAAATAGGAGGTTaGCGGGAACCCTCCAAAATGTACCAGAGACTTATA | + |
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Preference number: 6 (lower is better) Translates to: KNGNRQPREIGG*REPSKMYQRLI Trigger: TATAAGTCTCTGGTACATTTTGGAGGGTTCCCGCCAACCTCCTATTTCCCTAGGTTGTCTGTTTCCATTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159576.2 |
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