Pregenerated sensors for ALG8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035704Ensembl transcript IDs: ENSMUST00000098300.6
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AATTATGCCACTTTTCACCCACCCACCCCGGTTCACCCTCAGTGGACACAGCAGCCAAGTGTGGAAGAATaGTCCTTCAACGGATCTACT | + |
|
Preference number: 2 (lower is better) Translates to: NYATFHPPTPVHPQWTQQPSVEE*SFNGST Trigger: AGTAGATCCGTTGAAGGACCATTCTTCCACACTTGG...CTGCTGTGTCCACTGAGGGTGAACCGGGGTGGGTGGGTGAAAAGTGGCATAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| 3UTR-3UTR CCA 90 bp | GTACAGAATCTAATTATGCACTATATCCTAACAATGGTCAGTACCAGCCACAGACCGGTTCACCCTCAGTaGACACAGCAGTTTCAACAA | + |
|
Preference number: 2 (lower is better) Translates to: VQNLIMHYILTMVSTSHRPVHPQ*TQQFQQ Trigger: TTGTTGAAACTGCTGTGTCCACTGAGGGTGAACCGG...TCTGTGGCTGGTACTGACCATTGTTAGGATATAGTGCATAATTAGATTCTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| 3UTR-3UTR CCA 90 bp | AATTATGCACTATATCCTAACAATGGTCAGTACCAGCCACAGAAAATTATGCCAAATAGATCCTGCCACTaGCAACTTTCTTCAAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: NYALYPNNGQYQPQKIMPNRSCH*QLSSSS Trigger: AGAACTTGAAGAAAGTTGCCAGTGGCAGGATCTATT...TGGCATAATTTTCTGTGGCTGGTACTGACCATTGTTAGGATATAGTGCATAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| 3UTR CCA 72 bp | GCCACTTTTCACCCACCCACCCCGGTTCACCCTCAGTaGACACAGCAGTTTCAACAATTGCAGACTATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: ATFHPPTPVHPQ*TQQFQQLQTIF Trigger: AAAAATAGTCTGCAATTGTTGAAACTGCTGTGTCCACTGAGGGTGAACCGGGGTGGGTGGGTGAAAAGTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| 3UTR GCA 72 bp | CGGTTCACCCTCAGTGGACACAGCAGTTTCAACAATTaGAGACTATTTTTACAGAGGAAGGTGAGAGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RFTLSGHSSFNN*RLFLQRKVRVF Trigger: GAAAACTCTCACCTTCCTCTGTAAAAATAGTCTGCAATTGTTGAAACTGCTGTGTCCACTGAGGGTGAACCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| 3UTR CCA 72 bp | TTTCTCAAAAGTGTTTTGTTGCTTATAGAGGGCAAGTaGCTCCTCACCATGGAAACAATCAGGTTGCTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: FLKSVLLLIEGK*LLTMETIRLLG Trigger: GCCTAGCAACCTGATTGTTTCCATGGTGAGGAGCCACTTGCCCTCTATAAGCAACAAAACACTTTTGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| 3UTR-3UTR CAA 90 bp | AATTATGCACTATATCCTAACAATGGTCAGTACCAGCCACAGAAAATTATGCCATTTCTCAAAAGTGTTTaGTTGCTTATAGAGGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: NYALYPNNGQYQPQKIMPFLKSV*LLIEGK Trigger: CTTGCCCTCTATAAGCAACAAAACACTTTTGAGAAA...TGGCATAATTTTCTGTGGCTGGTACTGACCATTGTTAGGATATAGTGCATAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTAGGTACAGAATCTAATTATGCACTATATCCTAACAATGGTCAGTACCAGCAGCAGTTTCAACAATaGCAGACTATTTTTACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLGTESNYALYPNNGQYQQQFQQ*QTIFTE Trigger: CTCTGTAAAAATAGTCTGCAATTGTTGAAACTGCTG...CTGGTACTGACCATTGTTAGGATATAGTGCATAATTAGATTCTGTACCTAAGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CCA 90 bp | AAATTATGCCACTTTTCACCCACCCACCCCGGTTCACCCTCAGTGGACACAGCAGAGGCCCTGGGGATCTaGCTGGGGTCAAGAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLCHFSPTHPGSPSVDTAEALGI*LGSRSF Trigger: GAAGCTTCTTGACCCCAGCCAGATCCCCAGGGCCTC...TGCTGTGTCCACTGAGGGTGAACCGGGGTGGGTGGGTGAAAAGTGGCATAATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CCA 90 bp | AATTATGCCACTTTTCACCCACCCACCCCGGTTCACCCTCAGTGGACACAGCAGCAAAGCCCAGAAGTTTaGAGCCCAGTAGGCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NYATFHPPTPVHPQWTQQQSPEV*SPVGMA Trigger: TGCCATGCCTACTGGGCTCCAAACTTCTGGGCTTTG...CTGCTGTGTCCACTGAGGGTGAACCGGGGTGGGTGGGTGAAAAGTGGCATAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR TCA 90 bp | CTTATAGAGGGCAAGTGGCTCCTCACCATGGAAACAATCAGGTTGCTAGGCAGGCAAACCACTTGTCATTaGGGCCCTGGGGATCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LIEGKWLLTMETIRLLGRQTTCH*GPGDLA Trigger: AGCCAGATCCCCAGGGCCTCAATGACAAGTGGTTTG...CCTGCCTAGCAACCTGATTGTTTCCATGGTGAGGAGCCACTTGCCCTCTATAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR TCA 90 bp | CTTATAGAGGGCAAGTGGCTCCTCACCATGGAAACAATCAGGTTGCTAGGCAGGTGCCAAAGGGGAAACTaGGGGAAGGACTGTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIEGKWLLTMETIRLLGRCQRGN*GKDCVL Trigger: CAGCACACAGTCCTTCCCTCAGTTTCCCCTTTGGCA...CCTGCCTAGCAACCTGATTGTTTCCATGGTGAGGAGCCACTTGCCCTCTATAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR GCA 90 bp | AATTATGCCACTTTTCACCCACCCACCCCGGTTCACCCTCAGTGGACACAGCAGGCCATCTGGTTTACTTaGAGTGAAGCAGTAGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: NYATFHPPTPVHPQWTQQAIWFT*SEAVGP Trigger: CGGTCCTACTGCTTCACTGCAAGTAAACCAGATGGC...CTGCTGTGTCCACTGAGGGTGAACCGGGGTGGGTGGGTGAAAAGTGGCATAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR TCA 90 bp | AATTATGCCACTTTTCACCCACCCACCCCGGTTCACCCTCAGTGGACACAGCAGGTGTGCTGGAACTGCTaGACCAAACCACTTGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: NYATFHPPTPVHPQWTQQVCWNC*TKPLVI Trigger: AATGACAAGTGGTTTGGTTCAGCAGTTCCAGCACAC...CTGCTGTGTCCACTGAGGGTGAACCGGGGTGGGTGGGTGAAAAGTGGCATAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR TCA 90 bp | CTTATAGAGGGCAAGTGGCTCCTCACCATGGAAACAATCAGGTTGCTAGGCAGGTCAGCAGCAAAGGGATaGAGGGGTACTTCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIEGKWLLTMETIRLLGRSAAKG*RGTSAS Trigger: GGAAGCTGAAGTACCCCTTCATCCCTTTGCTGCTGA...CCTGCCTAGCAACCTGATTGTTTCCATGGTGAGGAGCCACTTGCCCTCTATAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR TCA 90 bp | AATTATGCCACTTTTCACCCACCCACCCCGGTTCACCCTCAGTGGACACAGCAGGTTTCTTTGTCTTGCTaGCAAGGGAGCCAGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: NYATFHPPTPVHPQWTQQVSLSC*QGSQST Trigger: TGTTGACTGGCTCCCTTGTCAGCAAGACAAAGAAAC...CTGCTGTGTCCACTGAGGGTGAACCGGGGTGGGTGGGTGAAAAGTGGCATAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR GCA 90 bp | AATTATGCCACTTTTCACCCACCCACCCCGGTTCACCCTCAGTGGACACAGCAGAACTGTCGCATCTCCTaGTTTTTCCACAGACAACAG | + |
|
Preference number: 4 (lower is better) Translates to: NYATFHPPTPVHPQWTQQNCRIS*FFHRQQ Trigger: CTGTTGTCTGTGGAAAAAGCAGGAGATGCGACAGTT...CTGCTGTGTCCACTGAGGGTGAACCGGGGTGGGTGGGTGAAAAGTGGCATAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR GCA 90 bp | AAATTATGCCACTTTTCACCCACCCACCCCGGTTCACCCTCAGTGGACACAGCAGCTTTCTCATGGACATaGCACCCAAACATGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLCHFSPTHPGSPSVDTAAFSWT*HPNMKE Trigger: TTCCTTCATGTTTGGGTGGCATGTCCATGAGAAAGC...TGCTGTGTCCACTGAGGGTGAACCGGGGTGGGTGGGTGAAAAGTGGCATAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CCA 90 bp | AATTATGCCACTTTTCACCCACCCACCCCGGTTCACCCTCAGTGGACACAGCAGGAAATAGACGTGCAATaGACAACAGCAGTAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NYATFHPPTPVHPQWTQQEIDVQ*TTAVIQ Trigger: CTGGATTACTGCTGTTGTCCATTGCACGTCTATTTC...CTGCTGTGTCCACTGAGGGTGAACCGGGGTGGGTGGGTGAAAAGTGGCATAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR TCA 90 bp | AAATTATGCCACTTTTCACCCACCCACCCCGGTTCACCCTCAGTGGACACAGCAACTTTGGTTTCTCTGTaGGGTCTTTGCCTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLCHFSPTHPGSPSVDTATLVSL*GLCLFF Trigger: AAAGAACAGGCAAAGACCTCACAGAGAAACCAAAGT...TGCTGTGTCCACTGAGGGTGAACCGGGGTGGGTGGGTGAAAAGTGGCATAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR TCA 90 bp | CTTATAGAGGGCAAGTGGCTCCTCACCATGGAAACAATCAGGTTGCTAGGCAGGGTGCATCTGTCAAGATaGCAGAAAACCTCTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LIEGKWLLTMETIRLLGRVHLSR*QKTSGK Trigger: TTTTCCAGAGGTTTTCTGTCATCTTGACAGATGCAC...CCTGCCTAGCAACCTGATTGTTTCCATGGTGAGGAGCCACTTGCCCTCTATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR TCA 90 bp | GTACAGAATCTAATTATGCACTATATCCTAACAATGGTCAGTACCAGCCACAGAGAAGTTCTGGTGCAGTaGAGAGCAGGGGGAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VQNLIMHYILTMVSTSHREVLVQ*RAGGRG Trigger: CCCTCTTCCCCCTGCTCTTCACTGCACCAGAACTTC...TCTGTGGCTGGTACTGACCATTGTTAGGATATAGTGCATAATTAGATTCTGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR GCA 90 bp | CACAGCAGTTTCAACAATTGCAGACTATTTTTACAGAGGAAGGTGAGAGTTTTCGTATGTGATGCCCACTaGACAGTACACCGAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSSFNNCRLFLQRKVRVFVCDAH*TVHRGQ Trigger: CTGACCTCGGTGTACTGTGCAGTGGGCATCACATAC...GAAAACTCTCACCTTCCTCTGTAAAAATAGTCTGCAATTGTTGAAACTGCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CCA 90 bp | CACAGCAGTTTCAACAATTGCAGACTATTTTTACAGAGGAAGGTGAGAGTTTTCAAAGCAGAGAACCAATaGCCACCAGCGGTTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HSSFNNCRLFLQRKVRVFKAENQ*PPAVAD Trigger: GTCTGCAACCGCTGGTGGCCATTGGTTCTCTGCTTT...GAAAACTCTCACCTTCCTCTGTAAAAATAGTCTGCAATTGTTGAAACTGCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CCA 90 bp | CAGAATCTAATTATGCACTATATCCTAACAATGGTCAGTACCAGCCACAGAAAATTGTCATTGAGGCCCTaGGGATCTGGCTGGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QNLIMHYILTMVSTSHRKLSLRP*GSGWGQ Trigger: TTGACCCCAGCCAGATCCCCAGGGCCTCAATGACAA...TTTTCTGTGGCTGGTACTGACCATTGTTAGGATATAGTGCATAATTAGATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| 3UTR CAA 72 bp | CCGGTTCACCCTCAGTGGACACAGCAGTTTCAACAATaGCAGACTATTTTTACAGAGGAAGGTGAGAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PVHPQWTQQFQQ*QTIFTEEGESF Trigger: AAAACTCTCACCTTCCTCTGTAAAAATAGTCTGCAATTGTTGAAACTGCTGTGTCCACTGAGGGTGAACCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR TCA 90 bp | TCCTTAGGTACAGAATCTAATTATGCACTATATCCTAACAATGGTCAGTACCAGGGCAAAGGCCCCTCTTaGAAGGAAAGAGTCGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLGTESNYALYPNNGQYQGKGPS*KERVGK Trigger: TTTCCCGACTCTTTCCTTTCAAGAGGGGCCTTTGCC...CTGGTACTGACCATTGTTAGGATATAGTGCATAATTAGATTCTGTACCTAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR GCA 90 bp | CACAGCAGTTTCAACAATTGCAGACTATTTTTACAGAGGAAGGTGAGAGTTTTCAATGGGAAGTTCTGGTaGAGTGAAGAGCAGGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HSSFNNCRLFLQRKVRVFNGKFW*SEEQGE Trigger: TTCCCCCTGCTCTTCACTGCACCAGAACTTCCCATT...GAAAACTCTCACCTTCCTCTGTAAAAATAGTCTGCAATTGTTGAAACTGCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| 3UTR CAA 72 bp | TTTACAGAGGAAGGTGAGAGTTTTCTCAAAAGTGTTTaGTTGCTTATAGAGGGCAAGTGGCTCCTCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: FTEEGESFLKSV*LLIEGKWLLTM Trigger: CATGGTGAGGAGCCACTTGCCCTCTATAAGCAACAAAACACTTTTGAGAAAACTCTCACCTTCCTCTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR GCA 90 bp | GTACAGAATCTAATTATGCACTATATCCTAACAATGGTCAGTACCAGCCACAGAGAGGCTGTGAGTGATTaGAAGCCAATTTCGGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VQNLIMHYILTMVSTSHREAVSD*KPISVY Trigger: GTACACCGAAATTGGCTTGCAATCACTCACAGCCTC...TCTGTGGCTGGTACTGACCATTGTTAGGATATAGTGCATAATTAGATTCTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CCA 90 bp | CAGAATCTAATTATGCACTATATCCTAACAATGGTCAGTACCAGCCACAGAAAAAAGCCTCTGGGCCCTTaGGGTTTAAACCAAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QNLIMHYILTMVSTSHRKKPLGP*GLNQRQ Trigger: CTGTCTTTGGTTTAAACCCCAAGGGCCCAGAGGCTT...TTTTCTGTGGCTGGTACTGACCATTGTTAGGATATAGTGCATAATTAGATTCTG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR TCA 90 bp | CAGAATCTAATTATGCACTATATCCTAACAATGGTCAGTACCAGCCACAGAAAACATGCCACCCAAACATaGAGGAACTCAAGGCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: QNLIMHYILTMVSTSHRKHATQT*RNSRHK Trigger: TTTGTGCCTTGAGTTCCTTCATGTTTGGGTGGCATG...TTTTCTGTGGCTGGTACTGACCATTGTTAGGATATAGTGCATAATTAGATTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CCA 90 bp | CACAGCAGTTTCAACAATTGCAGACTATTTTTACAGAGGAAGGTGAGAGTTTTCATACCACTGAGATATTaGGAGGCTGTGAGTGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSSFNNCRLFLQRKVRVFIPLRY*EAVSDC Trigger: GCAATCACTCACAGCCTCCCAATATCTCAGTGGTAT...GAAAACTCTCACCTTCCTCTGTAAAAATAGTCTGCAATTGTTGAAACTGCTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CCA 90 bp | TCCTTAGGTACAGAATCTAATTATGCACTATATCCTAACAATGGTCAGTACCAGGAATCGCAAGGAGTATaGCTTTCTCATGGACATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLGTESNYALYPNNGQYQESQGV*LSHGHA Trigger: GGCATGTCCATGAGAAAGCCATACTCCTTGCGATTC...CTGGTACTGACCATTGTTAGGATATAGTGCATAATTAGATTCTGTACCTAAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR TCA 90 bp | AAAAGTGTTTTGTTGCTTATAGAGGGCAAGTGGCTCCTCACCATGGAAACAATCGAAAAGCAATGTCCTTaGACTGTAATAGTTCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KSVLLLIEGKWLLTMETIEKQCP*TVIVQV Trigger: AACCTGAACTATTACAGTTCAAGGACATTGCTTTTC...GATTGTTTCCATGGTGAGGAGCCACTTGCCCTCTATAAGCAACAAAACACTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR TCA 90 bp | CACAGCAGTTTCAACAATTGCAGACTATTTTTACAGAGGAAGGTGAGAGTTTTCTCAATGTGCCTTTTCTaGAATAGACGTGCAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HSSFNNCRLFLQRKVRVFSMCLF*NRRAMD Trigger: GTCCATTGCACGTCTATTTCAGAAAAGGCACATTGA...GAAAACTCTCACCTTCCTCTGTAAAAATAGTCTGCAATTGTTGAAACTGCTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CCA 90 bp | AAAAGTGTTTTGTTGCTTATAGAGGGCAAGTGGCTCCTCACCATGGAAACAATCATGACAGAAAACCTCTaGAAAAGCAATGTCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KSVLLLIEGKWLLTMETIMTENL*KSNVLE Trigger: TTCAAGGACATTGCTTTTCCAGAGGTTTTCTGTCAT...GATTGTTTCCATGGTGAGGAGCCACTTGCCCTCTATAAGCAACAAAACACTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CCA 90 bp | AATTATGCACTATATCCTAACAATGGTCAGTACCAGCCACAGAAAATTATGCCAAGTATGGCTTTCTCATaGACATGCCACCCAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: NYALYPNNGQYQPQKIMPSMAFS*TCHPNM Trigger: CATGTTTGGGTGGCATGTCCATGAGAAAGCCATACT...TGGCATAATTTTCTGTGGCTGGTACTGACCATTGTTAGGATATAGTGCATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR GCA 90 bp | CACAGCAGTTTCAACAATTGCAGACTATTTTTACAGAGGAAGGTGAGAGTTTTCAGCATACACAAAGAGTaGATCTGTCAAGATGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSSFNNCRLFLQRKVRVFSIHKE*ICQDDR Trigger: TCTGTCATCTTGACAGATGCACTCTTTGTGTATGCT...GAAAACTCTCACCTTCCTCTGTAAAAATAGTCTGCAATTGTTGAAACTGCTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CCA 90 bp | GTACAGAATCTAATTATGCACTATATCCTAACAATGGTCAGTACCAGCCACAGACATTTACAGCACTCATaGACAGCATACACAAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VQNLIMHYILTMVSTSHRHLQHS*TAYTKS Trigger: ACTCTTTGTGTATGCTGTCCATGAGTGCTGTAAATG...TCTGTGGCTGGTACTGACCATTGTTAGGATATAGTGCATAATTAGATTCTGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR GCA 90 bp | CAGAATCTAATTATGCACTATATCCTAACAATGGTCAGTACCAGCCACAGAAAATTCTTTTTCCATCAATaGATTTACAGCACTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: QNLIMHYILTMVSTSHRKFFFHQ*IYSTHG Trigger: TCCATGAGTGCTGTAAATGCATTGATGGAAAAAGAA...TTTTCTGTGGCTGGTACTGACCATTGTTAGGATATAGTGCATAATTAGATTCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS TCA 90 bp | GTTGCCAAAGGGGAAACTGAGGGAAGGACTGTGTGCTGGAACTGCTaGACCAAACCACTTGTCATTGAGGCCCTGGGGATCTGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VAKGETEGRTVCWNC*TKPLVIEALGIWLG Trigger: CCCCAGCCAGATCCCCAGGGCCTCAATGACAAGTGGTTTGGTTCAGCAGTTCCAGCACACAGTCCTTCCCTCAGTTTCCCCTTTGGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CAA 90 bp | AATTATGCCACTTTTCACCCACCCACCCCGGTTCACCCTCAGTGGACACAGCAGGCTGAACCAAACCACTaGTCATTGAGGCCCTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: NYATFHPPTPVHPQWTQQAEPNH*SLRPWG Trigger: TCCCCAGGGCCTCAATGACAAGTGGTTTGGTTCAGC...CTGCTGTGTCCACTGAGGGTGAACCGGGGTGGGTGGGTGAAAAGTGGCATAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS CCA 90 bp | AGTAACGCGGACAACGCTGAAGCTGCTCCAACGGACACTGCCATCTaGTTTACTTGCAGTGAAGCAGTAGGACCGCAGCAGATAGACACC | + |
|
Preference number: 5 (lower is better) Translates to: SNADNAEAAPTDTAI*FTCSEAVGPQQIDT Trigger: GGTGTCTATCTGCTGCGGTCCTACTGCTTCACTGCAAGTAAACCAGATGGCAGTGTCCGTTGGAGCAGCTTCAGCGTTGTCCGCGTTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS TCA 90 bp | AAGCCCAGAAGTTTGGAGCCCAGTAGGCATGGCAAAGGCCCCTCTTaGAAGGAAAGAGTCGGGAAAAGACTTGTGGCAGCTGGTTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPRSLEPSRHGKGPS*KERVGKRLVAAGSR Trigger: CCTTGAACCAGCTGCCACAAGTCTTTTCCCGACTCTTTCCTTTCAAGAGGGGCCTTTGCCATGCCTACTGGGCTCCAAACTTCTGGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS TCA 90 bp | GGGAAGGACTGTGTGCTGGAACTGCTGAACCAAACCACTTGTCATTaGGGCCCTGGGGATCTGGCTGGGGTCAAGAAGCTTCAATTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GKDCVLELLNQTTCH*GPGDLAGVKKLQFQ Trigger: TTGAAATTGAAGCTTCTTGACCCCAGCCAGATCCCCAGGGCCTCAATGACAAGTGGTTTGGTTCAGCAGTTCCAGCACACAGTCCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CAA 90 bp | AAATTATGCCACTTTTCACCCACCCACCCCGGTTCACCCTCAGTGGACACAGCACAGACAACAGGCTCATaGGGAGAATCGCAAGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: KLCHFSPTHPGSPSVDTAQTTGS*GESQGV Trigger: TACTCCTTGCGATTCTCCCAATGAGCCTGTTGTCTG...TGCTGTGTCCACTGAGGGTGAACCGGGGTGGGTGGGTGAAAAGTGGCATAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CAA 90 bp | CTTATAGAGGGCAAGTGGCTCCTCACCATGGAAACAATCAGGTTGCTAGGCAGGAAAGCCTCTGGGCCCTaGGGGTTTAAACCAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LIEGKWLLTMETIRLLGRKASGP*GFKPKT Trigger: TGTCTTTGGTTTAAACCCCAAGGGCCCAGAGGCTTT...CCTGCCTAGCAACCTGATTGTTTCCATGGTGAGGAGCCACTTGCCCTCTATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CAA 90 bp | AATTATGCCACTTTTCACCCACCCACCCCGGTTCACCCTCAGTGGACACAGCAGGGGAATAGTGTCCTGTaGTCGCCAGAATCAGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: NYATFHPPTPVHPQWTQQGNSVL*SPESEK Trigger: TTTTTCTGATTCTGGCGACAACAGGACACTATTCCC...CTGCTGTGTCCACTGAGGGTGAACCGGGGTGGGTGGGTGAAAAGTGGCATAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS TCA 90 bp | CAATATGGCTATCAGTGTGCAGATGAGGGTTGCCAAAGGGGAAACTaGGGGAAGGACTGTGTGCTGGAACTGCTGAACCAAACCACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QYGYQCADEGCQRGN*GKDCVLELLNQTTC Trigger: ACAAGTGGTTTGGTTCAGCAGTTCCAGCACACAGTCCTTCCCTCAGTTTCCCCTTTGGCAACCCTCATCTGCACACTGATAGCCATATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS TCA 90 bp | GAATCGCAAGGAGTATGGCTTTCTCATGGACATGCCACCCAAACATaGAGGAACTCAAGGCACAAAGAACCAGGCATCGGAGAAAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ESQGVWLSHGHATQT*RNSRHKEPGIGESL Trigger: GAGGCTTTCTCCGATGCCTGGTTCTTTGTGCCTTGAGTTCCTTCATGTTTGGGTGGCATGTCCATGAGAAAGCCATACTCCTTGCGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS GCA 90 bp | AGGCTCATTGGGAGAATCGCAAGGAGTATGGCTTTCTCATGGACATaGCACCCAAACATGAAGGAACTCAAGGCACAAAGAACCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RLIGRIARSMAFSWT*HPNMKELKAQRTRH Trigger: ATGCCTGGTTCTTTGTGCCTTGAGTTCCTTCATGTTTGGGTGGCATGTCCATGAGAAAGCCATACTCCTTGCGATTCTCCCAATGAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS CCA 90 bp | CTGTGTGCTGGAACTGCTGAACCAAACCACTTGTCATTGAGGCCCTaGGGATCTGGCTGGGGTCAAGAAGCTTCAATTTCAAACCAATTA | + |
|
Preference number: 5 (lower is better) Translates to: LCAGTAEPNHLSLRP*GSGWGQEASISNQL Trigger: TAATTGGTTTGAAATTGAAGCTTCTTGACCCCAGCCAGATCCCCAGGGCCTCAATGACAAGTGGTTTGGTTCAGCAGTTCCAGCACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS CCA 90 bp | GACAACAGGCTCATTGGGAGAATCGCAAGGAGTATGGCTTTCTCATaGACATGCCACCCAAACATGAAGGAACTCAAGGCACAAAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: DNRLIGRIARSMAFS*TCHPNMKELKAQRT Trigger: GGTTCTTTGTGCCTTGAGTTCCTTCATGTTTGGGTGGCATGTCCATGAGAAAGCCATACTCCTTGCGATTCTCCCAATGAGCCTGTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CAA 90 bp | AATTATGCCACTTTTCACCCACCCACCCCGGTTCACCCTCAGTGGACACAGCAGACTTTGTCCAAAGCATaGTACAAAGCCCAGAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: NYATFHPPTPVHPQWTQQTLSKA*YKAQKF Trigger: AAACTTCTGGGCTTTGTACAATGCTTTGGACAAAGT...CTGCTGTGTCCACTGAGGGTGAACCGGGGTGGGTGGGTGAAAAGTGGCATAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS TCA 90 bp | TGGAGGAGGACAGCAAAGAGCAACGCCCCTTCAATGTGCCTTTTCTaGAATAGACGTGCAATGGACAACAGCAGTAATCCAGACAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: WRRTAKSNAPSMCLF*NRRAMDNSSNPDRK Trigger: CTTTCTGTCTGGATTACTGCTGTTGTCCATTGCACGTCTATTTCAGAAAAGGCACATTGAAGGGGCGTTGCTCTTTGCTGTCCTCCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS CCA 90 bp | TACAGACAGTACTTTGTCCAAAGCATTGTACAAAGCCCAGAAGTTTaGAGCCCAGTAGGCATGGCAAAGGCCCCTCTTGAAAGGAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: YRQYFVQSIVQSPEV*SPVGMAKAPLERKE Trigger: CTCTTTCCTTTCAAGAGGGGCCTTTGCCATGCCTACTGGGCTCCAAACTTCTGGGCTTTGTACAATGCTTTGGACAAAGTACTGTCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS CCA 90 bp | ACTGCTGAACCAAACCACTTGTCATTGAGGCCCTGGGGATCTGGCTaGGGTCAAGAAGCTTCAATTTCAAACCAATTACAGACAGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: TAEPNHLSLRPWGSG*GQEASISNQLQTVL Trigger: AAGTACTGTCTGTAATTGGTTTGAAATTGAAGCTTCTTGACCCCAGCCAGATCCCCAGGGCCTCAATGACAAGTGGTTTGGTTCAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CAA 90 bp | CTTATAGAGGGCAAGTGGCTCCTCACCATGGAAACAATCAGGTTGCTAGGCAGGGGAAAAGCAATGTCCTaGAACTGTAATAGTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LIEGKWLLTMETIRLLGRGKAMS*NCNSSG Trigger: ACCTGAACTATTACAGTTCAAGGACATTGCTTTTCC...CCTGCCTAGCAACCTGATTGTTTCCATGGTGAGGAGCCACTTGCCCTCTATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CAA 90 bp | CACAGCAGTTTCAACAATTGCAGACTATTTTTACAGAGGAAGGTGAGAGTTTTCCCAAACCACTTGTCATaGAGGCCCTGGGGATCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HSSFNNCRLFLQRKVRVFPNHLS*RPWGSG Trigger: GCCAGATCCCCAGGGCCTCAATGACAAGTGGTTTGG...GAAAACTCTCACCTTCCTCTGTAAAAATAGTCTGCAATTGTTGAAACTGCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CAA 90 bp | CACAGCAGTTTCAACAATTGCAGACTATTTTTACAGAGGAAGGTGAGAGTTTTCACAAAGCCCAGAAGTTaGGAGCCCAGTAGGCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: HSSFNNCRLFLQRKVRVFTKPRS*EPSRHG Trigger: GCCATGCCTACTGGGCTCCAAACTTCTGGGCTTTGT...GAAAACTCTCACCTTCCTCTGTAAAAATAGTCTGCAATTGTTGAAACTGCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CAA 90 bp | TCCTTAGGTACAGAATCTAATTATGCACTATATCCTAACAATGGTCAGTACCAGGAGTCGGGAAAAGACTaGTGGCAGCTGGTTCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLGTESNYALYPNNGQYQESGKD*WQLVQG Trigger: GCCTTGAACCAGCTGCCACAAGTCTTTTCCCGACTC...CTGGTACTGACCATTGTTAGGATATAGTGCATAATTAGATTCTGTACCTAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS GCA 90 bp | TCCATCAATGCATTTACAGCACTCATGGACAGCATACACAAAGAGTaGATCTGTCAAGATGACAGAAAACCTCTGGAAAAGCAATGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SINAFTALMDSIHKE*ICQDDRKPLEKQCP Trigger: AGGACATTGCTTTTCCAGAGGTTTTCTGTCATCTTGACAGATGCACTCTTTGTGTATGCTGTCCATGAGTGCTGTAAATGCATTGATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS TCA 90 bp | TACAGCACTCATGGACAGCATACACAAAGAGTGCATCTGTCAAGATaGCAGAAAACCTCTGGAAAAGCAATGTCCTTGAACTGTAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: YSTHGQHTQRVHLSR*QKTSGKAMSLNCNS Trigger: ACTATTACAGTTCAAGGACATTGCTTTTCCAGAGGTTTTCTGTCATCTTGACAGATGCACTCTTTGTGTATGCTGTCCATGAGTGCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS-3UTR CAA 90 bp | CAGAATCTAATTATGCACTATATCCTAACAATGGTCAGTACCAGCCACAGAAAATTCTCTGTGAGGTCTTaGCCTGTTCTTTTTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: QNLIMHYILTMVSTSHRKFSVRS*PVLFPS Trigger: TGATGGAAAAAGAACAGGCAAAGACCTCACAGAGAA...TTTTCTGTGGCTGGTACTGACCATTGTTAGGATATAGTGCATAATTAGATTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS TCA 90 bp | GGAAAAGCAATGTCCTTGAACTGTAATAGTTCAGGTTATGAATATTaGGCATCTCTTGATCAAAGTATTTGGCAATATGTGATAAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GKAMSLNCNSSGYEY*ASLDQSIWQYVIRR Trigger: ACGCCTTATCACATATTGCCAAATACTTTGATCAAGAGATGCTCAATATTCATAACCTGAACTATTACAGTTCAAGGACATTGCTTTTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS TCA 72 bp | GGGGAAACTGAGGGAAGGACTGTGTGCTGGAACTGCTaGACCAAACCACTTGTCATTGAGGCCCTGGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: GETEGRTVCWNC*TKPLVIEALGI Trigger: GATCCCCAGGGCCTCAATGACAAGTGGTTTGGTTCAGCAGTTCCAGCACACAGTCCTTCCCTCAGTTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS GCA 72 bp | AGCATACAGCCTGGTCCAGGCGTATGTGATGCCCACTaGACAGTACACCGAGGTCAGCAGCAAAGGGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: SIQPGPGVCDAH*TVHRGQQQRDE Trigger: TTCATCCCTTTGCTGCTGACCTCGGTGTACTGTGCAGTGGGCATCACATACGCCTGGACCAGGCTGTATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS CAA 72 bp | GAAGGACTGTGTGCTGGAACTGCTGAACCAAACCACTaGTCATTGAGGCCCTGGGGATCTGGCTGGGGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: EGLCAGTAEPNH*SLRPWGSGWGQ Trigger: TTGACCCCAGCCAGATCCCCAGGGCCTCAATGACAAGTGGTTTGGTTCAGCAGTTCCAGCACACAGTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS TCA 72 bp | TGTGTGCTGGAACTGCTGAACCAAACCACTTGTCATTaGGGCCCTGGGGATCTGGCTGGGGTCAAGAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CVLELLNQTTCH*GPGDLAGVKKL Trigger: AAGCTTCTTGACCCCAGCCAGATCCCCAGGGCCTCAATGACAAGTGGTTTGGTTCAGCAGTTCCAGCACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS CAA 90 bp | AAACTGAGGGAAGGACTGTGTGCTGGAACTGCTGAACCAAACCACTaGTCATTGAGGCCCTGGGGATCTGGCTGGGGTCAAGAAGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: KLREGLCAGTAEPNH*SLRPWGSGWGQEAS Trigger: TGAAGCTTCTTGACCCCAGCCAGATCCCCAGGGCCTCAATGACAAGTGGTTTGGTTCAGCAGTTCCAGCACACAGTCCTTCCCTCAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS TCA 72 bp | AGTTTGGAGCCCAGTAGGCATGGCAAAGGCCCCTCTTaGAAGGAAAGAGTCGGGAAAAGACTTGTGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLEPSRHGKGPS*KERVGKRLVAA Trigger: AGCTGCCACAAGTCTTTTCCCGACTCTTTCCTTTCAAGAGGGGCCTTTGCCATGCCTACTGGGCTCCAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS TCA 72 bp | TATCAGTGTGCAGATGAGGGTTGCCAAAGGGGAAACTaGGGGAAGGACTGTGTGCTGGAACTGCTGAACCAA | + |
|
Preference number: 6 (lower is better) Translates to: YQCADEGCQRGN*GKDCVLELLNQ Trigger: TTGGTTCAGCAGTTCCAGCACACAGTCCTTCCCTCAGTTTCCCCTTTGGCAACCCTCATCTGCACACTGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS TCA 72 bp | TTTCTTTGTCTTGCTGACAAGGGAGCCAGTCAACACTaGAGCATACAGCCTGGTCCAGGCGTATGTGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: FLCLADKGASQH*SIQPGPGVCDA Trigger: GGCATCACATACGCCTGGACCAGGCTGTATGCTTCAGTGTTGACTGGCTCCCTTGTCAGCAAGACAAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS GCA 72 bp | GGGAGAATCGCAAGGAGTATGGCTTTCTCATGGACATaGCACCCAAACATGAAGGAACTCAAGGCACAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: GRIARSMAFSWT*HPNMKELKAQR Trigger: TCTTTGTGCCTTGAGTTCCTTCATGTTTGGGTGGCATGTCCATGAGAAAGCCATACTCCTTGCGATTCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS CCA 72 bp | TACTTTGTCCAAAGCATTGTACAAAGCCCAGAAGTTTaGAGCCCAGTAGGCATGGCAAAGGCCCCTCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: YFVQSIVQSPEV*SPVGMAKAPLE Trigger: TTCAAGAGGGGCCTTTGCCATGCCTACTGGGCTCCAAACTTCTGGGCTTTGTACAATGCTTTGGACAAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS CCA 72 bp | CTCATTGGGAGAATCGCAAGGAGTATGGCTTTCTCATaGACATGCCACCCAAACATGAAGGAACTCAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LIGRIARSMAFS*TCHPNMKELKA Trigger: TGCCTTGAGTTCCTTCATGTTTGGGTGGCATGTCCATGAGAAAGCCATACTCCTTGCGATTCTCCCAATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS CAA 90 bp | AGCAGGAGCACGGACAGAATAAACTTTGGTTTCTCTGTGAGGTCTTaGCCTGTTCTTTTTCCATCAATGCATTTACAGCACTCATGGACA | + |
|
Preference number: 6 (lower is better) Translates to: SRSTDRINFGFSVRS*PVLFPSMHLQHSWT Trigger: TGTCCATGAGTGCTGTAAATGCATTGATGGAAAAAGAACAGGCAAAGACCTCACAGAGAAACCAAAGTTTATTCTGTCCGTGCTCCTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS GCA 72 bp | GCATTTACAGCACTCATGGACAGCATACACAAAGAGTaGATCTGTCAAGATGACAGAAAACCTCTGGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: AFTALMDSIHKE*ICQDDRKPLEK Trigger: CTTTTCCAGAGGTTTTCTGTCATCTTGACAGATGCACTCTTTGTGTATGCTGTCCATGAGTGCTGTAAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS CAA 72 bp | ACGGACAGAATAAACTTTGGTTTCTCTGTGAGGTCTTaGCCTGTTCTTTTTCCATCAATGCATTTACAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TDRINFGFSVRS*PVLFPSMHLQH Trigger: GTGCTGTAAATGCATTGATGGAAAAAGAACAGGCAAAGACCTCACAGAGAAACCAAAGTTTATTCTGTCCGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||
| CDS CAA 72 bp | AGAAGCTTCAATTTCAAACCAATTACAGACAGTACTTaGTCCAAAGCATTGTACAAAGCCCAGAAGTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RSFNFKPITDST*SKALYKAQKFG Trigger: TCCAAACTTCTGGGCTTTGTACAATGCTTTGGACAAAGTACTGTCTGTAATTGGTTTGAAATTGAAGCTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098300.6 |
||