Pregenerated sensors for ALG6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073792Ensembl transcript IDs: ENSMUST00000097961.9, ENSMUST00000107004.9, ENSMUST00000139799.3
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTAGCCTCAAATTCATGCTCCTCCTGCCTGTCCCTACCAAGTGCTaGGATGCCCAATGTGTACCAGCAGGCCTGGCTCTGTGTGCATTC | + |
|
Preference number: 1 (lower is better) Translates to: ASLKFMLLLPVPTKC*DAQCVPAGLALCAF Trigger: GAATGCACACAGAGCCAGGCCTGCTGGTACACATTGGGCATCTCAGCACTTGGTAGGGACAGGCAGGAGGAGCATGAATTTGAGGCTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| 3UTR GCA 90 bp | CCTCAAATTCATGCTCCTCCTGCCTGTCCCTACCAAGTGCTGAGATaGCCAATGTGTACCAGCAGGCCTGGCTCTGTGTGCATTCTGACT | + |
|
Preference number: 1 (lower is better) Translates to: PQIHAPPACPYQVLR*PMCTSRPGSVCILT Trigger: AGTCAGAATGCACACAGAGCCAGGCCTGCTGGTACACATTGGGCATCTCAGCACTTGGTAGGGACAGGCAGGAGGAGCATGAATTTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| 3UTR TCA 90 bp | TCATGCACACCAGAAAAGGGTATCAGATCCCATTACAGATGGTTGTaGGCCACCATGTGGTTGCTGGAATTGAATTCAGGTCCTCTGAAG | + |
|
Preference number: 1 (lower is better) Translates to: SCTPEKGIRSHYRWL*ATMWLLELNSGPLK Trigger: CTTCAGAGGACCTGAATTCAATTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATACCCTTTTCTGGTGTGCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| 3UTR CCA 90 bp | CTGTCCCTACCAAGTGCTGAGATGCCCAATGTGTACCAGCAGGCCTaGCTCTGTGTGCATTCTGACTGGTCTTACATTTTAAAACTATAT | + |
|
Preference number: 1 (lower is better) Translates to: LSLPSAEMPNVYQQA*LCVHSDWSYILKLY Trigger: ATATAGTTTTAAAATGTAAGACCAGTCAGAATGCACACAGAGCCAGGCCTGCTGGTACACATTGGGCATCTCAGCACTTGGTAGGGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGAATGTGTACCAGCAGGCCTaGCTCTGTGTGCATTCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: RVSDPITDGCEPPCGCWNVYQQA*LCVHSD Trigger: GTCAGAATGCACACAGAGCCAGGCCTGCTGGTACAC...ATTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGGTATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGAATTGGGAACCCTTTTGTTaGGACAGGGTCTCACATAGC | + |
|
Preference number: 2 (lower is better) Translates to: RVSDPITDGCEPPCGCWNWEPFC*DRVSHS Trigger: GCTATGTGAGACCCTGTCTCAACAAAAGGGTTCCCA...ATTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGGTATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGAATAGGCCTGGCTCTGTGTaGATTCTGACTGGTCTTACA | + |
|
Preference number: 2 (lower is better) Translates to: RVSDPITDGCEPPCGCWNRPGSV*ILTGLT Trigger: TGTAAGACCAGTCAGAATGCACACAGAGCCAGGCCT...ATTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGGTATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGAATTACCAAGTGCTGAGATaGCCAATGTGTACCAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: RVSDPITDGCEPPCGCWNYQVLR*PMCTSR Trigger: CCTGCTGGTACACATTGGGCATCTCAGCACTTGGTA...ATTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGCCACCATGTGGTTGCTGGAATTGAATTCAGGTCCTCTGAAGAGCAGCCAAGAAGACAAATGCTTTaGTCCTTGTATACACTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: VSHHVVAGIEFRSSEEQPRRQML*SLYTLC Trigger: ACAAAGTGTATACAAGGACCAAAGCATTTGTCTTCT...TGGCTGCTCTTCAGAGGACCTGAATTCAATTCCAGCAACCACATGGTGGCTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTATGCATACAAGTATGATATCTTCATGCACACCAGAAAAGGGTATCAGATCCAATTCATGCTCCTCCTaGCTGTCCCTACCAAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: FMHTSMISSCTPEKGIRSNSCSS*LSLPSA Trigger: AGCACTTGGTAGGGACAGGCAGGAGGAGCATGAATT...GGATCTGATACCCTTTTCTGGTGTGCATGAAGATATCATACTTGTATGCATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTATGCATACAAGTATGATATCTTCATGCACACCAGAAAAGGGTATCAGATCCGCTAAACAAGTCAGGTaGTTAATTCTTCCAATAAAC | + |
|
Preference number: 2 (lower is better) Translates to: FMHTSMISSCTPEKGIRSAKQVR*LILPIN Trigger: GTTTATTGGAAGAATTAAGCACCTGACTTGTTTAGC...GGATCTGATACCCTTTTCTGGTGTGCATGAAGATATCATACTTGTATGCATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| 3UTR GCA 72 bp | CATGCTCCTCCTGCCTGTCCCTACCAAGTGCTGAGATaGCCAATGTGTACCAGCAGGCCTGGCTCTGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: HAPPACPYQVLR*PMCTSRPGSVC Trigger: GCACACAGAGCCAGGCCTGCTGGTACACATTGGGCATCTCAGCACTTGGTAGGGACAGGCAGGAGGAGCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| 3UTR CCA 72 bp | CCAAGTGCTGAGATGCCCAATGTGTACCAGCAGGCCTaGCTCTGTGTGCATTCTGACTGGTCTTACATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: PSAEMPNVYQQA*LCVHSDWSYIL Trigger: TAAAATGTAAGACCAGTCAGAATGCACACAGAGCCAGGCCTGCTGGTACACATTGGGCATCTCAGCACTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGAATGCATTGGGAACCCTTTaGTTGAGACAGGGTCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: RVSDPITDGCEPPCGCWNALGTL*LRQGLT Trigger: TGTGAGACCCTGTCTCAACAAAAGGGTTCCCAATGC...ATTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| 3UTR TCA 72 bp | CCAGAAAAGGGTATCAGATCCCATTACAGATGGTTGTaGGCCACCATGTGGTTGCTGGAATTGAATTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: PEKGIRSHYRWL*ATMWLLELNSG Trigger: ACCTGAATTCAATTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATACCCTTTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTATGCATACAAGTATGATATCTTCATGCACACCAGAAAAGGGTATCAGATCCATGTGGTTGCTGGAATaGAATTCAGGTCCTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FMHTSMISSCTPEKGIRSMWLLE*NSGPLK Trigger: CTTCAGAGGACCTGAATTCAATTCCAGCAACCACAT...GGATCTGATACCCTTTTCTGGTGTGCATGAAGATATCATACTTGTATGCATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| 3UTR TCA 72 bp | AGAAACAGCTTTCCTGTGAAAGTAAAACACACTACATaGTTTTTAGGAATTGATATGGGTGAAGGGATAACC | + |
|
Preference number: 3 (lower is better) Translates to: RNSFPVKVKHTT*FLGIDMGEGIT Trigger: GGTTATCCCTTCACCCATATCAATTCCTAAAAATCATGTAGTGTGTTTTACTTTCACAGGAAAGCTGTTTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS-3UTR TCA 90 bp | GTGAGCCACCATGTGGTTGCTGGAATTGAATTCAGGTCCTCTGAAGAGCAGCCAACTCTCATAGCCTCGTaGTGTGTGGAGAGCAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSHHVVAGIEFRSSEEQPTLIAS*CVESNP Trigger: TGGGTTGCTCTCCACACATCACGAGGCTATGAGAGT...TGGCTGCTCTTCAGAGGACCTGAATTCAATTCCAGCAACCACATGGTGGCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS-3UTR GCA 90 bp | GTGAGCCACCATGTGGTTGCTGGAATTGAATTCAGGTCCTCTGAAGAGCAGCCAACAACCTGCAGGGCATaGTCCCTTTCTGTCAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSHHVVAGIEFRSSEEQPTTCRA*SLSVKN Trigger: GTTCTTGACAGAAAGGGAGCATGCCCTGCAGGTTGT...TGGCTGCTCTTCAGAGGACCTGAATTCAATTCCAGCAACCACATGGTGGCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS-3UTR TCA 90 bp | AGGGTATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGAATCCGCGGGTACGTAAATaGGCAAATCAGCAGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVSDPITDGCEPPCGCWNPRVRK*ANQQQE Trigger: TTCTTGCTGCTGATTTGCTCATTTACGTACCCGCGG...ATTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGAATCATGAAGAGCTTGTGTaGCTGACTCTCATAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RVSDPITDGCEPPCGCWNHEELV*LTLIAS Trigger: CGAGGCTATGAGAGTCAGGCACACAAGCTCTTCATG...ATTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS-3UTR GCA 90 bp | GTGAGCCACCATGTGGTTGCTGGAATTGAATTCAGGTCCTCTGAAGAGCAGCCAGCAAAGGACTTCAACTaGAGTTGTTCTTCGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSHHVVAGIEFRSSEEQPAKDFN*SCSSEV Trigger: CACTTCCGAAGAACAACTGCAGTTGAAGTCCTTTGC...TGGCTGCTCTTCAGAGGACCTGAATTCAATTCCAGCAACCACATGGTGGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS-3UTR TCA 90 bp | CTGCTAAACCATCTCTTCAGCCCAGAGATACAACTTCTGAATGAGATGCTCATCTGGTTTTCCAGCACCTaGGTAGGAACTGAGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLNHLFSPEIQLLNEMLIWFSST*VGTERD Trigger: GTCTCTCTCAGTTCCTACTCAGGTGCTGGAAAACCA...GATGAGCATCTCATTCAGAAGTTGTATCTCTGGGCTGAAGAGATGGTTTAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS-3UTR TCA 90 bp | AGGGTATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGAATGACCATGGTGATGACTaGAGAAAGAAACAAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: RVSDPITDGCEPPCGCWNDHGDD*RKKQTL Trigger: CAGTGTTTGTTTCTTTCTTCAGTCATCACCATGGTC...ATTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS-3UTR TCA 90 bp | CTGCTAAACCATCTCTTCAGCCCAGAGATACAACTTCTGAATGAGATGCTCATCAAGTCTGGTAATTTCTaGGGAGGGTCCAGTGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: LLNHLFSPEIQLLNEMLIKSGNF*GGSSVT Trigger: TGTAACACTGGACCCTCCTCAGAAATTACCAGACTT...GATGAGCATCTCATTCAGAAGTTGTATCTCTGGGCTGAAGAGATGGTTTAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGAATTATCCTAATGAACAATaGAAGCCCCTTTCCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RVSDPITDGCEPPCGCWNYPNEQ*KPLSFE Trigger: CTCAAAGGAAAGGGGCTTGCATTGTTCATTAGGATA...ATTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGAATACAAGCTATTACAAATaGCATCACTGTCACAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: RVSDPITDGCEPPCGCWNTSYYK*HHCHNR Trigger: TCGGTTGTGACAGTGATGGCATTTGTAATAGCTTGT...ATTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS-3UTR CCA 90 bp | GTGAGCCACCATGTGGTTGCTGGAATTGAATTCAGGTCCTCTGAAGAGCAGCCAATGATACCAAGAGAATaGACTTTTCATGTACTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSHHVVAGIEFRSSEEQPMIPRE*TFHVLG Trigger: TCCAAGTACATGAAAAGTCCATTCTCTTGGTATCAT...TGGCTGCTCTTCAGAGGACCTGAATTCAATTCCAGCAACCACATGGTGGCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS-3UTR GCA 90 bp | CTGCTAAACCATCTCTTCAGCCCAGAGATACAACTTCTGAATGAGATGCTCATCTGTCAGTTTTATACATaGAGGAAGCAAGCTCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLNHLFSPEIQLLNEMLICQFYT*RKQAQK Trigger: CTTTTGAGCTTGCTTCCTGCATGTATAAAACTGACA...GATGAGCATCTCATTCAGAAGTTGTATCTCTGGGCTGAAGAGATGGTTTAGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS-3UTR CCA 90 bp | TTTATGCATACAAGTATGATATCTTCATGCACACCAGAAAAGGGTATCAGATCCATAGGCCGTAAGAGGTaGGTAATCCAATCCCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FMHTSMISSCTPEKGIRSIGRKR*VIQSPV Trigger: TACTGGGGATTGGATTACCCACCTCTTACGGCCTAT...GGATCTGATACCCTTTTCTGGTGTGCATGAAGATATCATACTTGTATGCATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS-3UTR CCA 90 bp | TTTATGCATACAAGTATGATATCTTCATGCACACCAGAAAAGGGTATCAGATCCGAGAGCAACCCAGTCTaGGTTTATAAACTTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FMHTSMISSCTPEKGIRSESNPV*VYKLCH Trigger: GTGGCAAAGTTTATAAACCCAGACTGGGTTGCTCTC...GGATCTGATACCCTTTTCTGGTGTGCATGAAGATATCATACTTGTATGCATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS-3UTR CCA 90 bp | TTTATGCATACAAGTATGATATCTTCATGCACACCAGAAAAGGGTATCAGATCCAGTGTTCTCCAACATTaGAAAGAAAGTGCCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FMHTSMISSCTPEKGIRSSVLQH*KESATS Trigger: GCTTGTGGCACTTTCTTTCCAATGTTGGAGAACACT...GGATCTGATACCCTTTTCTGGTGTGCATGAAGATATCATACTTGTATGCATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS GCA 90 bp | TCCTCAAACAGTCCACGGTCAACAGGGAAGAGTCTTCTAACAACCTaGAGGGCATGCTCCCTTTCTGTCAAGAACGGCAGCCAACACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSNSPRSTGKSLLTT*RACSLSVKNGSQHR Trigger: TCTGTGTTGGCTGCCGTTCTTGACAGAAAGGGAGCATGCCCTGCAGGTTGTTAGAAGACTCTTCCCTGTTGACCGTGGACTGTTTGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097961.9 ENSMUST00000107004.9 |
||
| CDS TCA 90 bp | TGTGGCACGCATGAAGAGCTTGTGTGCCTGACTCTCATAGCCTCGTaGTGTGTGGAGAGCAACCCAGTCTGGGTTTATAAACTTTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CGTHEELVCLTLIAS*CVESNPVWVYKLCH Trigger: GTGGCAAAGTTTATAAACCCAGACTGGGTTGCTCTCCACACATCACGAGGCTATGAGAGTCAGGCACACAAGCTCTTCATGCGTGCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS GCA 90 bp | AGTCCACGGTCAACAGGGAAGAGTCTTCTAACAACCTGCAGGGCATaGTCCCTTTCTGTCAAGAACGGCAGCCAACACAGAAGGAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SPRSTGKSLLTTCRA*SLSVKNGSQHRRKE Trigger: TTCTTTCCTTCTGTGTTGGCTGCCGTTCTTGACAGAAAGGGAGCATGCCCTGCAGGTTGTTAGAAGACTCTTCCCTGTTGACCGTGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097961.9 ENSMUST00000107004.9 |
||
| CDS GCA 90 bp | AAGCCCGGAAGGTGCCTCCTTACAGAGACAGCAAAGGACTTCAACTaGAGTTGTTCTTCGGAAGTGTTCTCCAACATTGGAAAGAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KPGRCLLTETAKDFN*SCSSEVFSNIGKKV Trigger: CACTTTCTTTCCAATGTTGGAGAACACTTCCGAAGAACAACTGCAGTTGAAGTCCTTTGCTGTCTCTGTAAGGAGGCACCTTCCGGGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS GCA 90 bp | ACTGCAGTTGTTCTTCGGAAGTGTTCTCCAACATTGGAAAGAAAGTaGCACAAGCTATTACAAATGCCATCACTGTCACAACCGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TAVVLRKCSPTLERK*HKLLQMPSLSQPRA Trigger: TGCCCTCGGTTGTGACAGTGATGGCATTTGTAATAGCTTGTGGCACTTTCTTTCCAATGTTGGAGAACACTTCCGAAGAACAACTGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS-3UTR CAA 90 bp | CTGCTAAACCATCTCTTCAGCCCAGAGATACAACTTCTGAATGAGATGCTCATCGGACTTCAACTGCAGTaGTTCTTCGGAAGTGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLNHLFSPEIQLLNEMLIGLQLQ*FFGSVL Trigger: GAGAACACTTCCGAAGAACAACTGCAGTTGAAGTCC...GATGAGCATCTCATTCAGAAGTTGTATCTCTGGGCTGAAGAGATGGTTTAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS CCA 90 bp | GCAGGAAGCAAGCTCAAAAGTGTAAAGCAAAAGCTGATCGCTATCTaGATGTGGCGAGGCAAAGTGTCCTTAATCTTCAGAAAGACATTA | + |
|
Preference number: 5 (lower is better) Translates to: AGSKLKSVKQKLIAI*MWRGKVSLIFRKTL Trigger: TAATGTCTTTCTGAAGATTAAGGACACTTTGCCTCGCCACATCCAGATAGCGATCAGCTTTTGCTTTACACTTTTGAGCTTGCTTCCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097961.9 ENSMUST00000107004.9 |
||
| CDS-3UTR CAA 90 bp | TTTATGCATACAAGTATGATATCTTCATGCACACCAGAAAAGGGTATCAGATCCAAGTGTTCTCCAACATaGGAAAGAAAGTGCCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: FMHTSMISSCTPEKGIRSKCSPT*ERKCHK Trigger: CTTGTGGCACTTTCTTTCCAATGTTGGAGAACACTT...GGATCTGATACCCTTTTCTGGTGTGCATGAAGATATCATACTTGTATGCATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS-3UTR CAA 90 bp | TTTATGCATACAAGTATGATATCTTCATGCACACCAGAAAAGGGTATCAGATCCCGATTTCTTCCATTTTaGGAATCCCACATGATTACA | + |
|
Preference number: 5 (lower is better) Translates to: FMHTSMISSCTPEKGIRSRFLPF*ESHMIT Trigger: TGTAATCATGTGGGATTCCAAAAATGGAAGAAATCG...GGATCTGATACCCTTTTCTGGTGTGCATGAAGATATCATACTTGTATGCATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS GCA 72 bp | AGTCCACGGTCAACAGGGAAGAGTCTTCTAACAACCTaGAGGGCATGCTCCCTTTCTGTCAAGAACGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SPRSTGKSLLTT*RACSLSVKNGS Trigger: GCTGCCGTTCTTGACAGAAAGGGAGCATGCCCTGCAGGTTGTTAGAAGACTCTTCCCTGTTGACCGTGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097961.9 ENSMUST00000107004.9 |
||
| CDS TCA 72 bp | TTCATAATCACCAAACATAGGTGGTTTTCCAGCACCTaGGTAGGAACTGAGAGAGACCGTCCACCGCACCGT | + |
|
Preference number: 6 (lower is better) Translates to: FIITKHRWFSST*VGTERDRPPHR Trigger: ACGGTGCGGTGGACGGTCTCTCTCAGTTCCTACTCAGGTGCTGGAAAACCACCTATGTTTGGTGATTATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097961.9 ENSMUST00000107004.9 ENSMUST00000139799.3 |
||
| CDS CAA 90 bp | CGGAAGGTGCCTCCTTACAGAGACAGCAAAGGACTTCAACTGCAGTaGTTCTTCGGAAGTGTTCTCCAACATTGGAAAGAAAGTGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RKVPPYRDSKGLQLQ*FFGSVLQHWKESAT Trigger: TGTGGCACTTTCTTTCCAATGTTGGAGAACACTTCCGAAGAACAACTGCAGTTGAAGTCCTTTGCTGTCTCTGTAAGGAGGCACCTTCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS GCA 72 bp | CAACATTGGAAAGAAAGTGCCACAAGCTATTACAAATaGCATCACTGTCACAACCGAGGGCAGCAGGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: QHWKESATSYYK*HHCHNRGQQEF Trigger: GAACTCCTGCTGCCCTCGGTTGTGACAGTGATGGCATTTGTAATAGCTTGTGGCACTTTCTTTCCAATGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS GCA 72 bp | AGGTGCCTCCTTACAGAGACAGCAAAGGACTTCAACTaGAGTTGTTCTTCGGAAGTGTTCTCCAACATTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RCLLTETAKDFN*SCSSEVFSNIG Trigger: TCCAATGTTGGAGAACACTTCCGAAGAACAACTGCAGTTGAAGTCCTTTGCTGTCTCTGTAAGGAGGCACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||
| CDS CCA 72 bp | AAGCTCAAAAGTGTAAAGCAAAAGCTGATCGCTATCTaGATGTGGCGAGGCAAAGTGTCCTTAATCTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: KLKSVKQKLIAI*MWRGKVSLIFR Trigger: TCTGAAGATTAAGGACACTTTGCCTCGCCACATCCAGATAGCGATCAGCTTTTGCTTTACACTTTTGAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097961.9 ENSMUST00000107004.9 |
||
| CDS CCA 72 bp | AAAAGTGTAAAGCAAAAGCTGATCGCTATCTGGATGTaGCGAGGCAAAGTGTCCTTAATCTTCAGAAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: KSVKQKLIAIWM*RGKVSLIFRKT Trigger: TGTCTTTCTGAAGATTAAGGACACTTTGCCTCGCCACATCCAGATAGCGATCAGCTTTTGCTTTACACTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097961.9 ENSMUST00000107004.9 |
||
| CDS TCA 72 bp | AAACATATAAGTACAGGAAACAAGTCTGGTAATTTCTaGGGAGGGTCCAGTGTTACACTCAAAATCGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KHISTGNKSGNF*GGSSVTLKIVR Trigger: CCTGACGATTTTGAGTGTAACACTGGACCCTCCTCAGAAATTACCAGACTTGTTTCCTGTACTTATATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097961.9 |
||