Pregenerated sensors for ALG5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036632Ensembl transcript IDs: ENSMUST00000044567.4, ENSMUST00000141191.8, ENSMUST00000155273.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGACTTTAAGATCAGAACCACAAGCAGCAAGTTCTGCTGCTTGCTaGGGCTGGGGCATGGCCCCCTTGTTCAATTACATCCTCACTAGC | + |
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Preference number: 1 (lower is better) Translates to: LTLRSEPQAASSAAC*GWGMAPLFNYILTS Trigger: GCTAGTGAGGATGTAATTGAACAAGGGGGCCATGCCCCAGCCCCAGCAAGCAGCAGAACTTGCTGCTTGTGGTTCTGATCTTAAAGTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR GCA 90 bp | GTCAACGCGATCTTCAGATCTCCAACTCCTTTCAGCTTTGTTGACTaGAACACCCTTCTTTCTCTCGGGCTGATTCCACTCGTTAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: VNAIFRSPTPFSFVD*NTLLSLGLIPLVSS Trigger: GCTGCTAACGAGTGGAATCAGCCCGAGAGAAAGAAGGGTGTTGCAGTCAACAAAGCTGAAAGGAGTTGGAGATCTGAAGATCGCGTTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR TCA 90 bp | GGTTCCCTTCATTGCCTAAGCTTGGCTGTCCTGGATCTTTGCCTGTaGACCAGATGGACTTTAAACACAGATATCCACATGCCTCCGTCT | + |
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Preference number: 1 (lower is better) Translates to: GSLHCLSLAVLDLCL*TRWTLNTDIHMPPS Trigger: AGACGGAGGCATGTGGATATCTGTGTTTAAAGTCCATCTGGTTCACAGGCAAAGATCCAGGACAGCCAAGCTTAGGCAATGAAGGGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR CCA 90 bp | TTCCGCACCAGCGTTATCACCCGGACTTTGTCACTTCCGTATTTCTaGCAGTATTTTAAAGCGACCTTTGACGTCTGGTCTTCACTGCCA | + |
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Preference number: 1 (lower is better) Translates to: FRTSVITRTLSLPYF*QYFKATFDVWSSLP Trigger: TGGCAGTGAAGACCAGACGTCAAAGGTCGCTTTAAAATACTGCCAGAAATACGGAAGTGACAAAGTCCGGGTGATAACGCTGGTGCGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141191.8 ENSMUST00000155273.2 |
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| 3UTR CCA 90 bp | TGGCCCCCTTGTTCAATTACATCCTCACTAGCTTTCTGTTTTTCGTaGTTCCCTTCATTGCCTAAGCTTGGCTGTCCTGGATCTTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: WPPCSITSSLAFCFS*FPSLPKLGCPGSLP Trigger: AGGCAAAGATCCAGGACAGCCAAGCTTAGGCAATGAAGGGAACCACGAAAAACAGAAAGCTAGTGAGGATGTAATTGAACAAGGGGGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR TCA 90 bp | ACGTCTGGTCTTCACTGCCATCGTCAACCACTATCACCTCATACGTaGACGTACAATCATGTTTCTGTCTCTTTTCTAGGTAGTTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: TSGLHCHRQPLSPHT*TYNHVSVSFLGSSG Trigger: CCCTGAACTACCTAGAAAAGAGACAGAAACATGATTGTACGTTCACGTATGAGGTGATAGTGGTTGACGATGGCAGTGAAGACCAGACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141191.8 ENSMUST00000155273.2 |
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| 3UTR TCA 90 bp | AGGATAAACATAATGGTTCCAGAACATATAGGGAAGAGAGCATACTaGGGAAATACTGAACCAAGGCAAGACCAAGAGCCAGCTGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: RINIMVPEHIGKRAY*GNTEPRQDQEPAGP Trigger: TGGCCCAGCTGGCTCTTGGTCTTGCCTTGGTTCAGTATTTCCTCAGTATGCTCTCTTCCCTATATGTTCTGGAACCATTATGTTTATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR TCA 90 bp | CCCTCAATTTCTGTCCAGTTGACAGCAACTTCTGCTATTGGGATTTaGAGACACTGTGCTATGTACAGCAGCTCTACATCAAATGCCCAT | + |
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Preference number: 1 (lower is better) Translates to: PSISVQLTATSAIGI*RHCAMYSSSTSNAH Trigger: ATGGGCATTTGATGTAGAGCTGCTGTACATAGCACAGTGTCTTCAAATCCCAATAGCAGAAGTTGCTGTCAACTGGACAGAAATTGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR GCA 90 bp | TGTCCAGTTGACAGCAACTTCTGCTATTGGGATTTGAAGACACTGTaGTATGTACAGCAGCTCTACATCAAATGCCCATCGTTCAATGTG | + |
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Preference number: 1 (lower is better) Translates to: CPVDSNFCYWDLKTL*YVQQLYIKCPSFNV Trigger: CACATTGAACGATGGGCATTTGATGTAGAGCTGCTGTACATAGCACAGTGTCTTCAAATCCCAATAGCAGAAGTTGCTGTCAACTGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR CCA 90 bp | CTTAGAACCCTCAATTTCTGTCCAGTTGACAGCAACTTCTGCTATTaGGATTTGAAGACACTGTGCTATGTACAGCAGCTCTACATCAAA | + |
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Preference number: 1 (lower is better) Translates to: LRTLNFCPVDSNFCY*DLKTLCYVQQLYIK Trigger: TTTGATGTAGAGCTGCTGTACATAGCACAGTGTCTTCAAATCCCAATAGCAGAAGTTGCTGTCAACTGGACAGAAATTGAGGGTTCTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR CCA 90 bp | TATTGGGGCTGGATTACAGTTCAAATGTTTAGTTCATTATTGTCATaGCAGCACACAGACAGACATGGTGCTGGAGAAGGAGCTGATAAT | + |
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Preference number: 1 (lower is better) Translates to: YWGWITVQMFSSLLS*QHTDRHGAGEGADN Trigger: ATTATCAGCTCCTTCTCCAGCACCATGTCTGTCTGTGTGCTGCCATGACAATAATGAACTAAACATTTGAACTGTAATCCAGCCCCAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR CAA 90 bp | TGCAGAGACGAGAAGGTCCGGGCTGCTGCTTCTCGGGTCAGTAATTaGAACCCGCACTGTGTGTCCCTGATTCCTTTGACACAGAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: CRDEKVRAAASRVSN*NPHCVSLIPLTQRN Trigger: GTTCCTCTGTGTCAAAGGAATCAGGGACACACAGTGCGGGTTCAAATTACTGACCCGAGAAGCAGCAGCCCGGACCTTCTCGTCTCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR CAA 90 bp | AAAAATGCAGTCCAGCCCTGCCAGCAACTAACTCGCTTTCCGTGTTaGCTTGAGCCTCCAGGCACCCGTCAGATACCGAAGTCGGATGAA | + |
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Preference number: 2 (lower is better) Translates to: KNAVQPCQQLTRFPC*LEPPGTRQIPKSDE Trigger: TTCATCCGACTTCGGTATCTGACGGGTGCCTGGAGGCTCAAGCAAACACGGAAAGCGAGTTAGTTGCTGGCAGGGCTGGACTGCATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR-3UTR TCA 90 bp | CATGCAATAGCCATTTGCTCAGGCCATGGCTGTAGATCACTCAGCCCCTTTTCTCGTCAGCATCTGCCATaGGGATCTTCTCTCCTCGGG | + |
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Preference number: 2 (lower is better) Translates to: HAIAICSGHGCRSLSPFSRQHLP*GSSLLG Trigger: CCCGAGGAGAGAAGATCCTCATGGCAGATGCTGACG...AGAAAAGGGGCTGAGTGATCTACAGCCATGGCCTGAGCAAATGGCTATTGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000141191.8 ENSMUST00000155273.2 |
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| 3UTR-3UTR CCA 90 bp | CATGCCTCCGTCTCCCCAGTGCTGGGATTTAAAGTTGTGTATCACCATGCCTGGCATCTGGAAACTTTGTaGCTCCGTCAGCATCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: HASVSPVLGFKVVYHHAWHLETL*LRQHLP Trigger: TGGCAGATGCTGACGGAGCCACAAAGTTTCCAGATG...CCAGGCATGGTGATACACAACTTTAAATCCCAGCACTGGGGAGACGGAGGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR-3UTR CCA 90 bp | CATGCCTCCGTCTCCCCAGTGCTGGGATTTAAAGTTGTGTATCACCATGCCTGGGAGAAGATATCCCAATaGGAAGACTGTGGGGCCACA | + |
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Preference number: 2 (lower is better) Translates to: HASVSPVLGFKVVYHHAWEKISQ*EDCGAT Trigger: TGTGGCCCCACAGTCTTCCCATTGGGATATCTTCTC...CCAGGCATGGTGATACACAACTTTAAATCCCAGCACTGGGGAGACGGAGGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR CAA 90 bp | GCACCACCTTTCCCACGGTTCCGCACCAGCGTTATCACCCGGACTTaGTCACTTCCGTATTTCTGGCAGTATTTTAAAGCGACCTTTGAC | + |
|
Preference number: 2 (lower is better) Translates to: APPFPRFRTSVITRT*SLPYFWQYFKATFD Trigger: GTCAAAGGTCGCTTTAAAATACTGCCAGAAATACGGAAGTGACAAAGTCCGGGTGATAACGCTGGTGCGGAACCGTGGGAAAGGTGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141191.8 ENSMUST00000155273.2 |
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| 3UTR CAA 90 bp | CTCCAGGCACCCGTCAGATACCGAAGTCGGATGAAAAGCAGGTCTTaGCCCATTTGTAGCCAGCTCCAGAATGGAACTAACTTAGAACCC | + |
|
Preference number: 2 (lower is better) Translates to: LQAPVRYRSRMKSRS*PICSQLQNGTNLEP Trigger: GGGTTCTAAGTTAGTTCCATTCTGGAGCTGGCTACAAATGGGCAAAGACCTGCTTTTCATCCGACTTCGGTATCTGACGGGTGCCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR-3UTR CCA 90 bp | CATGCAATAGCCATTTGCTCAGGCCATGGCTGTAGATCACTCAGCCCCTTTTCTGCGACCTTTGACGTCTaGTCTTCACTGCCATCGTCA | + |
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Preference number: 2 (lower is better) Translates to: HAIAICSGHGCRSLSPFSATFDV*SSLPSS Trigger: TGACGATGGCAGTGAAGACCAGACGTCAAAGGTCGC...AGAAAAGGGGCTGAGTGATCTACAGCCATGGCCTGAGCAAATGGCTATTGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000141191.8 ENSMUST00000155273.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCCATCGTTCAATGTGCAGAGACGAGAAGGTCCGGGCTGCTGCTTCTCGGGTTCACTTCCGTATTTCTaGCAGTATTTTAAAGCGACC | + |
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Preference number: 2 (lower is better) Translates to: CPSFNVQRREGPGCCFSGSLPYF*QYFKAT Trigger: GGTCGCTTTAAAATACTGCCAGAAATACGGAAGTGA...ACCCGAGAAGCAGCAGCCCGGACCTTCTCGTCTCTGCACATTGAACGATGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCTGAGGGGAAGTCTCTACCTGCCCTATGCACACTTAAAGAAACCAACTCTGAGCTCGAGACCCACATaGAATAGCCATTTGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: VLRGSLYLPYAHLKKPTLSSRPT*NSHLLR Trigger: CCTGAGCAAATGGCTATTGCATGTGGGTCTCGAGCT...CAGAGTTGGTTTCTTTAAGTGTGCATAGGGCAGGTAGAGACTTCCCCTCAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155273.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCTTGAGCCTCCAGGCACCCGTCAGATACCGAAGTCGGATGAAAAGCAGGTCCTGGAGACTCAGTCATaGCTTTATTACAGTTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: LLEPPGTRQIPKSDEKQVLETQS*LYYSFL Trigger: TAGGAAACTGTAATAAAGGCATGACTGAGTCTCCAG...GACCTGCTTTTCATCCGACTTCGGTATCTGACGGGTGCCTGGAGGCTCAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR CAA 90 bp | TCTCGGGTCAGTAATTTGAACCCGCACTGTGTGTCCCTGATTCCTTaGACACAGAGGAACCACACCAGGAAATGGAATCCGTACATAAGA | + |
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Preference number: 2 (lower is better) Translates to: SRVSNLNPHCVSLIP*TQRNHTRKWNPYIR Trigger: TCTTATGTACGGATTCCATTTCCTGGTGTGGTTCCTCTGTGTCAAAGGAATCAGGGACACACAGTGCGGGTTCAAATTACTGACCCGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR CAA 90 bp | TTTTCGTGGTTCCCTTCATTGCCTAAGCTTGGCTGTCCTGGATCTTaGCCTGTGAACCAGATGGACTTTAAACACAGATATCCACATGCC | + |
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Preference number: 2 (lower is better) Translates to: FSWFPSLPKLGCPGS*PVNQMDFKHRYPHA Trigger: GGCATGTGGATATCTGTGTTTAAAGTCCATCTGGTTCACAGGCAAAGATCCAGGACAGCCAAGCTTAGGCAATGAAGGGAACCACGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAGCGTTATCACCCGGACTTTGTCACTTCCGTATTTCTGGCAGTATTTTAAAGCGACCTTTGACGTCTaGTCTTCACTGCCATCGTCA | + |
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Preference number: 2 (lower is better) Translates to: TSVITRTLSLPYFWQYFKATFDV*SSLPSS Trigger: TGACGATGGCAGTGAAGACCAGACGTCAAAGGTCGC...TTTAAAATACTGCCAGAAATACGGAAGTGACAAAGTCCGGGTGATAACGCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141191.8 ENSMUST00000155273.2 |
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| 3UTR CAA 90 bp | TCAATTACATCCTCACTAGCTTTCTGTTTTTCGTGGTTCCCTTCATaGCCTAAGCTTGGCTGTCCTGGATCTTTGCCTGTGAACCAGATG | + |
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Preference number: 2 (lower is better) Translates to: SITSSLAFCFSWFPS*PKLGCPGSLPVNQM Trigger: CATCTGGTTCACAGGCAAAGATCCAGGACAGCCAAGCTTAGGCAATGAAGGGAACCACGAAAAACAGAAAGCTAGTGAGGATGTAATTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR CAA 90 bp | ACCCTCAATTTCTGTCCAGTTGACAGCAACTTCTGCTATTGGGATTaGAAGACACTGTGCTATGTACAGCAGCTCTACATCAAATGCCCA | + |
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Preference number: 2 (lower is better) Translates to: TLNFCPVDSNFCYWD*KTLCYVQQLYIKCP Trigger: TGGGCATTTGATGTAGAGCTGCTGTACATAGCACAGTGTCTTCAAATCCCAATAGCAGAAGTTGCTGTCAACTGGACAGAAATTGAGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGAGATGAAGAGCAAACAGGCTTTGCACAGAGAAGATATCCCAATGGGAAGACATGCAATAGCCATTTaGTCAGGCCATGGCTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: KEMKSKQALHREDIPMGRHAIAI*SGHGCR Trigger: TCTACAGCCATGGCCTGAGCAAATGGCTATTGCATG...TCTTCCCATTGGGATATCTTCTCTGTGCAAAGCCTGTTTGCTCTTCATCTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCCATGGCTGTAGATCACTCAGCCCCTTTTCTAATTTCTCAACATCTGGAATCACTTCCGTATTTCTaGCAGTATTTTAAAGCGACC | + |
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Preference number: 2 (lower is better) Translates to: QAMAVDHSAPFLISQHLESLPYF*QYFKAT Trigger: GGTCGCTTTAAAATACTGCCAGAAATACGGAAGTGA...TTCCAGATGTTGAGAAATTAGAAAAGGGGCTGAGTGATCTACAGCCATGGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000141191.8 ENSMUST00000155273.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCCCATCGAGGCTTTATTGAAAATCTTGATTTCAAGTGAAATTGCATGTGGGCAGCTCTACATCAAATaGCCATCGTTCAATGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: RPIEALLKILISSEIACGQLYIK*PSFNVQ Trigger: CTGCACATTGAACGATGGGCATTTGATGTAGAGCTG...CCCACATGCAATTTCACTTGAAATCAAGATTTTCAATAAAGCCTCGATGGGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCCCATCGAGGCTTTATTGAAAATCTTGATTTCAAGTGAAATTGCATGTGGGTCTCAGAACCTTAAGTaGCAGGAGCCAAAATACAGA | + |
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Preference number: 2 (lower is better) Translates to: RPIEALLKILISSEIACGSQNLK*QEPKYR Trigger: TCTGTATTTTGGCTCCTGTCACTTAAGGTTCTGAGA...CCCACATGCAATTTCACTTGAAATCAAGATTTTCAATAAAGCCTCGATGGGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044567.4 ENSMUST00000141191.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCCCATCGAGGCTTTATTGAAAATCTTGATTTCAAGTGAAATTGCATGTGGGCTGGAGACTCAGTCATaGCTTTATTACAGTTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: RPIEALLKILISSEIACGLETQS*LYYSFL Trigger: TAGGAAACTGTAATAAAGGCATGACTGAGTCTCCAG...CCCACATGCAATTTCACTTGAAATCAAGATTTTCAATAAAGCCTCGATGGGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044567.4 ENSMUST00000141191.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCCCATCGAGGCTTTATTGAAAATCTTGATTTCAAGTGAAATTGCATGTGGGGACTTCATCTTTAAATaGCTGTTACAGGGTTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: RPIEALLKILISSEIACGDFIFK*LLQGCD Trigger: ATCACAACCCTGTAACAGTCATTTAAAGATGAAGTC...CCCACATGCAATTTCACTTGAAATCAAGATTTTCAATAAAGCCTCGATGGGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044567.4 ENSMUST00000141191.8 |
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| 3UTR GCA 72 bp | TACAGCAGCTCTACATCAAATGCCCATCGTTCAATGTaGAGAGACGAGAAGGTCCGGGCTGCTGCTTCTCGG | + |
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Preference number: 3 (lower is better) Translates to: YSSSTSNAHRSM*RDEKVRAAASR Trigger: CCGAGAAGCAGCAGCCCGGACCTTCTCGTCTCTGCACATTGAACGATGGGCATTTGATGTAGAGCTGCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR CCA 72 bp | AGATCAGAACCACAAGCAGCAAGTTCTGCTGCTTGCTaGGGCTGGGGCATGGCCCCCTTGTTCAATTACATC | + |
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Preference number: 3 (lower is better) Translates to: RSEPQAASSAAC*GWGMAPLFNYI Trigger: GATGTAATTGAACAAGGGGGCCATGCCCCAGCCCCAGCAAGCAGCAGAACTTGCTGCTTGTGGTTCTGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR-3UTR CAA 90 bp | ATCAGAACCACAAGCAGCAAGTTCTGCTGCTTGCTGGGGCTGGGGCATGGCCCCCCCATCGAGGCTTTATaGAAAATCTTGATTTCAAGT | + |
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Preference number: 3 (lower is better) Translates to: IRTTSSKFCCLLGLGHGPPIEAL*KILISS Trigger: ACTTGAAATCAAGATTTTCAATAAAGCCTCGATGGG...GGGGCCATGCCCCAGCCCCAGCAAGCAGCAGAACTTGCTGCTTGTGGTTCTGAT 51% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR GCA 72 bp | CTCAACATCTGGAAACTTTGTGGCTCCGTCAGCATCTaGCATGAGGATCTTCTCTCCTCGGGAACTGAATAC | + |
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Preference number: 3 (lower is better) Translates to: LNIWKLCGSVSI*HEDLLSSGTEY Trigger: GTATTCAGTTCCCGAGGAGAGAAGATCCTCATGGCAGATGCTGACGGAGCCACAAAGTTTCCAGATGTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141191.8 ENSMUST00000155273.2 |
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| 3UTR CCA 72 bp | AACACAGATATCCACATGCCTCCGTCTCCCCAGTGCTaGGATTTAAAGTTGTGTATCACCATGCCTGGACCT | + |
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Preference number: 3 (lower is better) Translates to: NTDIHMPPSPQC*DLKLCITMPGP Trigger: AGGTCCAGGCATGGTGATACACAACTTTAAATCCCAGCACTGGGGAGACGGAGGCATGTGGATATCTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR-3UTR CAA 90 bp | AGCAGGTCTTTGCCCATTTGTAGCCAGCTCCAGAATGGAACTAACTTAGAACCCCAACATCTGGAAACTTaGTGGCTCCGTCAGCATCTG | + |
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Preference number: 3 (lower is better) Translates to: SRSLPICSQLQNGTNLEPQHLET*WLRQHL Trigger: CAGATGCTGACGGAGCCACAAAGTTTCCAGATGTTG...GGGTTCTAAGTTAGTTCCATTCTGGAGCTGGCTACAAATGGGCAAAGACCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR TCA 72 bp | AGAACATATAGGGAAGAGAGCATACTGAGGAAATACTaGACCAAGGCAAGACCAAGAGCCAGCTGGGCCAAC | + |
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Preference number: 3 (lower is better) Translates to: RTYREESILRKY*TKARPRASWAN Trigger: GTTGGCCCAGCTGGCTCTTGGTCTTGCCTTGGTTCAGTATTTCCTCAGTATGCTCTCTTCCCTATATGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR TCA 72 bp | CATGGTGCTGGAGAAGGAGCTGATAATTCTACATCTTaGTCTGAAGGCAGCAGGAGACATGCTCTACACTGG | + |
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Preference number: 3 (lower is better) Translates to: HGAGEGADNSTS*SEGSRRHALHW Trigger: CCAGTGTAGAGCATGTCTCCTGCTGCCTTCAGATCAAGATGTAGAATTATCAGCTCCTTCTCCAGCACCATG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR-3UTR CAA 90 bp | GCGATCTTCAGATCTCCAACTCCTTTCAGCTTTGTTGACTGCAACACCCTTCTTCTTCATTGCCTAAGCTaGGCTGTCCTGGATCTTTGC | + |
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Preference number: 3 (lower is better) Translates to: AIFRSPTPFSFVDCNTLLLHCLS*AVLDLC Trigger: GCAAAGATCCAGGACAGCCAAGCTTAGGCAATGAAG...AAGAAGGGTGTTGCAGTCAACAAAGCTGAAAGGAGTTGGAGATCTGAAGATCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR GCA 72 bp | TTAAACACAGATATCCACATGCCTCCGTCTCCCCAGTaGTGGGATTTAAAGTTGTGTATCACCATGCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: LNTDIHMPPSPQ*WDLKLCITMPG Trigger: TCCAGGCATGGTGATACACAACTTTAAATCCCAGCACTGGGGAGACGGAGGCATGTGGATATCTGTGTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR GCA 72 bp | ATCTTCAGATCTCCAACTCCTTTCAGCTTTGTTGACTaGAACACCCTTCTTTCTCTCGGGCTGATTCCACTC | + |
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Preference number: 3 (lower is better) Translates to: IFRSPTPFSFVD*NTLLSLGLIPL Trigger: GAGTGGAATCAGCCCGAGAGAAAGAAGGGTGTTGCAGTCAACAAAGCTGAAAGGAGTTGGAGATCTGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR-3UTR CAA 90 bp | ATATACCTATCATTCCTTAGAAACTACTTTTTGGATAAAGGGTTTCCCGTGGTTGCTTTCCGTGTTTGCTaGAGCCTCCAGGCACCCGTC | + |
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Preference number: 3 (lower is better) Translates to: IYLSFLRNYFLDKGFPVVAFRVC*SLQAPV Trigger: GACGGGTGCCTGGAGGCTCAAGCAAACACGGAAAGC...AACCACGGGAAACCCTTTATCCAAAAAGTAGTTTCTAAGGAATGATAGGTATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR GCA 72 bp | AAGGAAGAGGACACCTTGAGCCTGGAGACTCAGTCATaGCTTTATTACAGTTTCCTAGTGTTCCAAGTCACA | + |
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Preference number: 3 (lower is better) Translates to: KEEDTLSLETQS*LYYSFLVFQVT Trigger: TGTGACTTGGAACACTAGGAAACTGTAATAAAGGCATGACTGAGTCTCCAGGCTCAAGGTGTCCTCTTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| 3UTR-3UTR CAA 90 bp | ATGGTGCTGGAGAAGGAGCTGATAATTCTACATCTTGATCTGAAGGCAGCAGGAAAGGGTTTCCCGTGGTaGAGATACAGTTTAGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: MVLEKELIILHLDLKAAGKGFPW*RYSLGI Trigger: TATTCCTAAACTGTATCTCAACCACGGGAAACCCTT...TCCTGCTGCCTTCAGATCAAGATGTAGAATTATCAGCTCCTTCTCCAGCACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
||
| 3UTR TCA 72 bp | TCTGTCCAGTTGACAGCAACTTCTGCTATTGGGATTTaGAGACACTGTGCTATGTACAGCAGCTCTACATCA | + |
|
Preference number: 3 (lower is better) Translates to: SVQLTATSAIGI*RHCAMYSSSTS Trigger: TGATGTAGAGCTGCTGTACATAGCACAGTGTCTTCAAATCCCAATAGCAGAAGTTGCTGTCAACTGGACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
||
| 3UTR CCA 72 bp | CTCAATTTCTGTCCAGTTGACAGCAACTTCTGCTATTaGGATTTGAAGACACTGTGCTATGTACAGCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LNFCPVDSNFCY*DLKTLCYVQQL Trigger: GAGCTGCTGTACATAGCACAGTGTCTTCAAATCCCAATAGCAGAAGTTGCTGTCAACTGGACAGAAATTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
||
| 3UTR CCA 72 bp | TGTTCAATTACATCCTCACTAGCTTTCTGTTTTTCGTaGTTCCCTTCATTGCCTAAGCTTGGCTGTCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CSITSSLAFCFS*FPSLPKLGCPG Trigger: TCCAGGACAGCCAAGCTTAGGCAATGAAGGGAACCACGAAAAACAGAAAGCTAGTGAGGATGTAATTGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAACATAGGGACCCATTTCTTGTCAGATGTCAACAGGTTGTTATCTATAGCCAACATCTGGAAACTTaGTGGCTCCGTCAGCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: RKHRDPFLVRCQQVVIYSQHLET*WLRQHL Trigger: CAGATGCTGACGGAGCCACAAAGTTTCCAGATGTTG...GCTATAGATAACAACCTGTTGACATCTGACAAGAAATGGGTCCCTATGTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155273.2 |
||
| 3UTR TCA 72 bp | CTTCACTGCCATCGTCAACCACTATCACCTCATACGTaGACGTACAATCATGTTTCTGTCTCTTTTCTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LHCHRQPLSPHT*TYNHVSVSFLG Trigger: ACCTAGAAAAGAGACAGAAACATGATTGTACGTTCACGTATGAGGTGATAGTGGTTGACGATGGCAGTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141191.8 ENSMUST00000155273.2 |
||
| 3UTR TCA 72 bp | ATAATGGTTCCAGAACATATAGGGAAGAGAGCATACTaGGGAAATACTGAACCAAGGCAAGACCAAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: IMVPEHIGKRAY*GNTEPRQDQEP Trigger: TGGCTCTTGGTCTTGCCTTGGTTCAGTATTTCCTCAGTATGCTCTCTTCCCTATATGTTCTGGAACCATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
||
| 3UTR GCA 72 bp | AGAACCCTCAATTTCTGTCCAGTTGACAGCAACTTCTaGTATTGGGATTTGAAGACACTGTGCTATGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: RTLNFCPVDSNF*YWDLKTLCYVQ Trigger: CTGTACATAGCACAGTGTCTTCAAATCCCAATAGCAGAAGTTGCTGTCAACTGGACAGAAATTGAGGGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
||
| 3UTR-3UTR CAA 90 bp | GCGATCTTCAGATCTCCAACTCCTTTCAGCTTTGTTGACTGCAACACCCTTCTTCCGTTTCTTCTATTCTaGACTTTAAGATCAGAACCA | + |
|
Preference number: 3 (lower is better) Translates to: AIFRSPTPFSFVDCNTLLPFLLF*TLRSEP Trigger: TGGTTCTGATCTTAAAGTCAAGAATAGAAGAAACGG...AAGAAGGGTGTTGCAGTCAACAAAGCTGAAAGGAGTTGGAGATCTGAAGATCGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
||
| 3UTR TCA 72 bp | GCCCATCGAGGCTTTATTGAAAATCTTGATTTCAAGTaGAATTGCATGTGGGATAAAAATGCAGTCCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: AHRGFIENLDFK*NCMWDKNAVQP Trigger: GGGCTGGACTGCATTTTTATCCCACATGCAATTTCACTTGAAATCAAGATTTTCAATAAAGCCTCGATGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044567.4 ENSMUST00000141191.8 |
||
| 3UTR CCA 72 bp | TCCTTAGAAACTACTTTTTGGATAAAGGGTTTCCCGTaGTTGAGATACAGTTTAGGAATAGTCTTGCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLETTFWIKGFP*LRYSLGIVLPG Trigger: CCCAGGCAAGACTATTCCTAAACTGTATCTCAACCACGGGAAACCCTTTATCCAAAAAGTAGTTTCTAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTCATAGCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGCCCATCGAGGCTTTATaGAAAATCTTGATTTCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LLIAVNSQEYTKADTENRPIEAL*KILISS Trigger: ACTTGAAATCAAGATTTTCAATAAAGCCTCGATGGG...CCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGCTATGAGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044567.4 ENSMUST00000141191.8 |
||
| 3UTR CAA 72 bp | GTCCAGCCCTGCCAGCAACTAACTCGCTTTCCGTGTTaGCTTGAGCCTCCAGGCACCCGTCAGATACCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VQPCQQLTRFPC*LEPPGTRQIPK Trigger: CTTCGGTATCTGACGGGTGCCTGGAGGCTCAAGCAAACACGGAAAGCGAGTTAGTTGCTGGCAGGGCTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
||
| 3UTR CAA 72 bp | GAGAAGGTCCGGGCTGCTGCTTCTCGGGTCAGTAATTaGAACCCGCACTGTGTGTCCCTGATTCCTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: EKVRAAASRVSN*NPHCVSLIPLT Trigger: TGTCAAAGGAATCAGGGACACACAGTGCGGGTTCAAATTACTGACCCGAGAAGCAGCAGCCCGGACCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTCGGGAACTGAATACACCCATCCTAACAGCACCACCTTTCCCACGGTTGGGAGAGCTTCCTTCTaGCCTTTGGCATTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSSGTEYTHPNSTTFPTVGRASF*PLALRK Trigger: CTTCCTCAATGCCAAAGGCCAGAAGGAAGCTCTCCC...AACCGTGGGAAAGGTGGTGCTGTTAGGATGGGTGTATTCAGTTCCCGAGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141191.8 ENSMUST00000155273.2 |
||
| CDS-3UTR CCA 90 bp | ATCAGAACCACAAGCAGCAAGTTCTGCTGCTTGCTGGGGCTGGGGCATGGCCCCATGTTGGTAACATGGTaGCATTTTTGTAGCAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: IRTTSSKFCCLLGLGHGPMLVTW*HFCSSY Trigger: ATAACTGCTACAAAAATGCCACCATGTTACCAACAT...GGGGCCATGCCCCAGCCCCAGCAAGCAGCAGAACTTGCTGCTTGTGGTTCTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
||
| 3UTR CAA 72 bp | TTCCCACGGTTCCGCACCAGCGTTATCACCCGGACTTaGTCACTTCCGTATTTCTGGCAGTATTTTAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FPRFRTSVITRT*SLPYFWQYFKA Trigger: CGCTTTAAAATACTGCCAGAAATACGGAAGTGACAAAGTCCGGGTGATAACGCTGGTGCGGAACCGTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141191.8 ENSMUST00000155273.2 |
||
| 3UTR CAA 72 bp | CCCGTCAGATACCGAAGTCGGATGAAAAGCAGGTCTTaGCCCATTTGTAGCCAGCTCCAGAATGGAACTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PVRYRSRMKSRS*PICSQLQNGTN Trigger: GTTAGTTCCATTCTGGAGCTGGCTACAAATGGGCAAAGACCTGCTTTTCATCCGACTTCGGTATCTGACGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGCCCATCGAGCGTCAGCATCTGCCATaGGGATCTTCTCTCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: AVNSQEYTKADTENRPIERQHLP*GSSLLG Trigger: CCCGAGGAGAGAAGATCCTCATGGCAGATGCTGACG...CTCGATGGGCCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
||
| CDS-3UTR TCA 90 bp | GCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGCCCATCGAGCTTTCCGTGTTTGCTTaGGCCTCCAGGCACCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AVNSQEYTKADTENRPIELSVFA*ASRHPS Trigger: TGACGGGTGCCTGGAGGCTCAAGCAAACACGGAAAG...CTCGATGGGCCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
||
| 3UTR CAA 72 bp | TCCTCACTAGCTTTCTGTTTTTCGTGGTTCCCTTCATaGCCTAAGCTTGGCTGTCCTGGATCTTTGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLAFCFSWFPS*PKLGCPGSLPV Trigger: CACAGGCAAAGATCCAGGACAGCCAAGCTTAGGCAATGAAGGGAACCACGAAAAACAGAAAGCTAGTGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTGAGGGGAAGTCTCTACCTGCCCTATGCACACTTAAAGAAACCAACTCTGTCTGGCCTTTGGCATTaGGGAAGAATTTCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLRGSLYLPYAHLKKPTLSGLWH*GRISLP Trigger: AGGAAGAGAAATTCTTCCTCAATGCCAAAGGCCAGA...CAGAGTTGGTTTCTTTAAGTGTGCATAGGGCAGGTAGAGACTTCCCCTCAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155273.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGCCCATCGAGCTCGGGTCAGTAATTTaGACCCGCACTGTGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AVNSQEYTKADTENRPIELGSVI*TRTVCP Trigger: GGGACACACAGTGCGGGTTCAAATTACTGACCCGAG...CTCGATGGGCCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
||
| CDS-3UTR GCA 90 bp | CTCCTCATAGCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGCTCGCTTTCCGTGTTTaGTTGAGCCTCCAGGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: LLIAVNSQEYTKADTENRLAFRV*LSLQAP Trigger: GGGTGCCTGGAGGCTCAAGCAAACACGGAAAGCGAG...CCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGCTATGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
||
| CDS-3UTR CCA 90 bp | GCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGCCCATCGAGGGGAGAGCTTCCTTCTaGCCTTTGGCATTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AVNSQEYTKADTENRPIEGRASF*PLALRK Trigger: CTTCCTCAATGCCAAAGGCCAGAAGGAAGCTCTCCC...CTCGATGGGCCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044567.4 ENSMUST00000141191.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCCATCGAGGCTTTATTGAAAATCTTGATTTCAAGTGAAATTGCATGTGGGGCGACCTTTGACGTCTaGTCTTCACTGCCATCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPIEALLKILISSEIACGATFDV*SSLPSS Trigger: TGACGATGGCAGTGAAGACCAGACGTCAAAGGTCGC...CCCACATGCAATTTCACTTGAAATCAAGATTTTCAATAAAGCCTCGATGGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
||
| CDS-3UTR TCA 90 bp | CCTTTGACACAGAGGAACCACACCAGGAAATGGAATCCGTACATAAGAAAGGTATCTGGCCTTTGGCATTaGGGAAGAATTTCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLTQRNHTRKWNPYIRKVSGLWH*GRISLP Trigger: AGGAAGAGAAATTCTTCCTCAATGCCAAAGGCCAGA...TACCTTTCTTATGTACGGATTCCATTTCCTGGTGTGGTTCCTCTGTGTCAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCCATCGAGGCTTTATTGAAAATCTTGATTTCAAGTGAAATTGCATGTGGGAGCTCGAGACCCACATaGAATAGCCATTTGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPIEALLKILISSEIACGSSRPT*NSHLLR Trigger: CCTGAGCAAATGGCTATTGCATGTGGGTCTCGAGCT...CCCACATGCAATTTCACTTGAAATCAAGATTTTCAATAAAGCCTCGATGGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
||
| CDS-3UTR CCA 90 bp | GGCAGTATTTTAAAGCGACCTTTGACGTCTGGTCTTCACTGCCATCGTCAACCACTCATGTTGGTAACATaGTGGCATTTTTGTAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSILKRPLTSGLHCHRQPLMLVT*WHFCSS Trigger: ACTGCTACAAAAATGCCACCATGTTACCAACATGAG...TGGTTGACGATGGCAGTGAAGACCAGACGTCAAAGGTCGCTTTAAAATACTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000141191.8 ENSMUST00000155273.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTCATAGCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGGGGAGAGCTTCCTTCTaGCCTTTGGCATTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLIAVNSQEYTKADTENRGRASF*PLALRK Trigger: CTTCCTCAATGCCAAAGGCCAGAAGGAAGCTCTCCC...CCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGCTATGAGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044567.4 ENSMUST00000141191.8 |
||
| 3UTR CAA 72 bp | TTCTGTCCAGTTGACAGCAACTTCTGCTATTGGGATTaGAAGACACTGTGCTATGTACAGCAGCTCTACATC | + |
|
Preference number: 4 (lower is better) Translates to: FCPVDSNFCYWD*KTLCYVQQLYI Trigger: GATGTAGAGCTGCTGTACATAGCACAGTGTCTTCAAATCCCAATAGCAGAAGTTGCTGTCAACTGGACAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCCATCGAGGCTTTATTGAAAATCTTGATTTCAAGTGAAATTGCATGTGGGCATGCAATAGCCATTTaGTCAGGCCATGGCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RPIEALLKILISSEIACGHAIAI*SGHGCR Trigger: TCTACAGCCATGGCCTGAGCAAATGGCTATTGCATG...CCCACATGCAATTTCACTTGAAATCAAGATTTTCAATAAAGCCTCGATGGGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
||
| CDS-3UTR CCA 90 bp | CTCCTCATAGCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGCATCTGGAAACTTTGTaGCTCCGTCAGCATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLIAVNSQEYTKADTENRHLETL*LRQHLP Trigger: TGGCAGATGCTGACGGAGCCACAAAGTTTCCAGATG...CCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGCTATGAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
||
| CDS-3UTR TCA 90 bp | GCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGCCCATCGAGTCTGCTATTGGGATTTaGAGACACTGTGCTATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AVNSQEYTKADTENRPIESAIGI*RHCAMY Trigger: GTACATAGCACAGTGTCTTCAAATCCCAATAGCAGA...CTCGATGGGCCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
||
| CDS-3UTR CCA 90 bp | GCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGCCCATCGAGAGCAACTTCTGCTATTaGGATTTGAAGACACTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AVNSQEYTKADTENRPIESNFCY*DLKTLC Trigger: GCACAGTGTCTTCAAATCCCAATAGCAGAAGTTGCT...CTCGATGGGCCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
||
| 3UTR CAA 72 bp | AAGGCAGATACTGAGAACAGGCCCATCGAGGCTTTATaGAAAATCTTGATTTCAAGTGAAATTGCATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KADTENRPIEAL*KILISSEIACG Trigger: CCCACATGCAATTTCACTTGAAATCAAGATTTTCAATAAAGCCTCGATGGGCCTGTTCTCAGTATCTGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044567.4 ENSMUST00000141191.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTCATAGCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGTCTGGCCTTTGGCATTaGGGAAGAATTTCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLIAVNSQEYTKADTENRSGLWH*GRISLP Trigger: AGGAAGAGAAATTCTTCCTCAATGCCAAAGGCCAGA...CCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGCTATGAGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044567.4 ENSMUST00000141191.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGCCCATCGAGCTCATGTTGGTAACATaGTGGCATTTTTGTAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AVNSQEYTKADTENRPIELMLVT*WHFCSS Trigger: ACTGCTACAAAAATGCCACCATGTTACCAACATGAG...CTCGATGGGCCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044567.4 ENSMUST00000141191.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGCCCATCGAGAACCACACCAGGAAATaGAATCCGTACATAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AVNSQEYTKADTENRPIENHTRK*NPYIRK Trigger: CTTTCTTATGTACGGATTCCATTTCCTGGTGTGGTT...CTCGATGGGCCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
||
| 3UTR CAA 72 bp | TTAGAAACTACTTTTTGGATAAAGGGTTTCCCGTGGTaGAGATACAGTTTAGGAATAGTCTTGCCTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LETTFWIKGFPW*RYSLGIVLPGL Trigger: CAACCCAGGCAAGACTATTCCTAAACTGTATCTCAACCACGGGAAACCCTTTATCCAAAAAGTAGTTTCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
||
| 3UTR CAA 72 bp | CACAGAGGGAGATTCCATAATCCGTTTCTTCTATTCTaGACTTTAAGATCAGAACCACAAGCAGCAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HRGRFHNPFLLF*TLRSEPQAASS Trigger: AGAACTTGCTGCTTGTGGTTCTGATCTTAAAGTCAAGAATAGAAGAAACGGATTATGGAATCTCCCTCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTCATAGCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGGTTGACAGCAACTTCTaGTATTGGGATTTGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLIAVNSQEYTKADTENRVDSNF*YWDLKT Trigger: TGTCTTCAAATCCCAATAGCAGAAGTTGCTGTCAAC...CCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGCTATGAGGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
||
| CDS-3UTR CCA 90 bp | GCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGCCCATCGAGATGTTGGTAACATGGTaGCATTTTTGTAGCAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AVNSQEYTKADTENRPIEMLVTW*HFCSSY Trigger: ATAACTGCTACAAAAATGCCACCATGTTACCAACAT...CTCGATGGGCCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044567.4 ENSMUST00000141191.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTCATAGCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGTCACTTCCGTATTTCTaGCAGTATTTTAAAGCGACC | + |
|
Preference number: 4 (lower is better) Translates to: LLIAVNSQEYTKADTENRSLPYF*QYFKAT Trigger: GGTCGCTTTAAAATACTGCCAGAAATACGGAAGTGA...CCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGCTATGAGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
||
| CDS-3UTR CCA 90 bp | TACCTGCCCTATGCACACTTAAAGAAACCAACTCTGAAATGTGCTAATCTTTCAATGTTGGTAACATGGTaGCATTTTTGTAGCAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: YLPYAHLKKPTLKCANLSMLVTW*HFCSSY Trigger: ATAACTGCTACAAAAATGCCACCATGTTACCAACAT...TGAAAGATTAGCACATTTCAGAGTTGGTTTCTTTAAGTGTGCATAGGGCAGGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155273.2 |
||
| CDS-3UTR CAA 90 bp | CCCATCCTAACAGCACCACCTTTCCCACGGTTCCGCACCAGCGTTATCACCCGGGCTTCCTTCTGGCCTTaGGCATTGAGGAAGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: PILTAPPFPRFRTSVITRASFWP*ALRKNF Trigger: GAAATTCTTCCTCAATGCCAAAGGCCAGAAGGAAGC...CCGGGTGATAACGCTGGTGCGGAACCGTGGGAAAGGTGGTGCTGTTAGGATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141191.8 ENSMUST00000155273.2 |
||
| CDS-3UTR CAA 90 bp | AACAGCACCACCTTTCCCACGGTTCCGCACCAGCGTTATCACCCGGACTTTGTCGCTTCCTTCTGGCCTTaGGCATTGAGGAAGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSTTFPTVPHQRYHPDFVASFWP*ALRKNF Trigger: GAAATTCTTCCTCAATGCCAAAGGCCAGAAGGAAGC...GACAAAGTCCGGGTGATAACGCTGGTGCGGAACCGTGGGAAAGGTGGTGCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141191.8 ENSMUST00000155273.2 |
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| CDS-3UTR CAA 90 bp | TTGCTTGAGCCTCCAGGCACCCGTCAGATACCGAAGTCGGATGAAAAGCAGGTCTTTCTCTTCCTCATGTaGGTAACATGGTGGCATTTT | + |
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Preference number: 5 (lower is better) Translates to: LLEPPGTRQIPKSDEKQVFLFLM*VTWWHF Trigger: AAAATGCCACCATGTTACCAACATGAGGAAGAGAAA...GACCTGCTTTTCATCCGACTTCGGTATCTGACGGGTGCCTGGAGGCTCAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141191.8 |
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| CDS-3UTR CAA 90 bp | AGGCCCATCGAGGCTTTATTGAAAATCTTGATTTCAAGTGAAATTGCATGTGGGGCTTTCCGTGTTTGCTaGAGCCTCCAGGCACCCGTC | + |
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Preference number: 5 (lower is better) Translates to: RPIEALLKILISSEIACGAFRVC*SLQAPV Trigger: GACGGGTGCCTGGAGGCTCAAGCAAACACGGAAAGC...CCCACATGCAATTTCACTTGAAATCAAGATTTTCAATAAAGCCTCGATGGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
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| CDS-3UTR CAA 90 bp | GCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGCCCATCGAGACTCGCTTTCCGTGTTaGCTTGAGCCTCCAGGCACC | + |
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Preference number: 5 (lower is better) Translates to: AVNSQEYTKADTENRPIETRFPC*LEPPGT Trigger: GGTGCCTGGAGGCTCAAGCAAACACGGAAAGCGAGT...CTCGATGGGCCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
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| CDS-3UTR CAA 90 bp | GGCAGTATTTTAAAGCGACCTTTGACGTCTGGTCTTCACTGCCATCGTCAACCATTCTGGCCTTTGGCATaGAGGAAGAATTTCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: GSILKRPLTSGLHCHRQPFWPLA*RKNFSS Trigger: GGAAGAGAAATTCTTCCTCAATGCCAAAGGCCAGAA...TGGTTGACGATGGCAGTGAAGACCAGACGTCAAAGGTCGCTTTAAAATACTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141191.8 ENSMUST00000155273.2 |
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| CDS-3UTR CAA 90 bp | GCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGCCCATCGAGGTGTCCCTGATTCCTTaGACACAGAGGAACCACACC | + |
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Preference number: 5 (lower is better) Translates to: AVNSQEYTKADTENRPIEVSLIP*TQRNHT Trigger: GGTGTGGTTCCTCTGTGTCAAAGGAATCAGGGACAC...CTCGATGGGCCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
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| CDS-3UTR CAA 90 bp | AGGCCCATCGAGGCTTTATTGAAAATCTTGATTTCAAGTGAAATTGCATGTGGGCAACATCTGGAAACTTaGTGGCTCCGTCAGCATCTG | + |
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Preference number: 5 (lower is better) Translates to: RPIEALLKILISSEIACGQHLET*WLRQHL Trigger: CAGATGCTGACGGAGCCACAAAGTTTCCAGATGTTG...CCCACATGCAATTTCACTTGAAATCAAGATTTTCAATAAAGCCTCGATGGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
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| CDS-3UTR CAA 90 bp | CTCCTCATAGCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGTCTCGGGTCAGTAATTaGAACCCGCACTGTGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: LLIAVNSQEYTKADTENRSRVSN*NPHCVS Trigger: GGACACACAGTGCGGGTTCAAATTACTGACCCGAGA...CCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGCTATGAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
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| CDS-3UTR CAA 90 bp | GCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGCCCATCGAGTTCTGGCCTTTGGCATaGAGGAAGAATTTCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: AVNSQEYTKADTENRPIEFWPLA*RKNFSS Trigger: GGAAGAGAAATTCTTCCTCAATGCCAAAGGCCAGAA...CTCGATGGGCCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044567.4 ENSMUST00000141191.8 |
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| CDS-3UTR CAA 90 bp | AGGCCCATCGAGGCTTTATTGAAAATCTTGATTTCAAGTGAAATTGCATGTGGGGCTTCCTTCTGGCCTTaGGCATTGAGGAAGAATTTC | + |
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Preference number: 5 (lower is better) Translates to: RPIEALLKILISSEIACGASFWP*ALRKNF Trigger: GAAATTCTTCCTCAATGCCAAAGGCCAGAAGGAAGC...CCCACATGCAATTTCACTTGAAATCAAGATTTTCAATAAAGCCTCGATGGGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044567.4 ENSMUST00000141191.8 |
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| CDS-3UTR CAA 90 bp | CTCCTCATAGCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGATGAAAAGCAGGTCTTaGCCCATTTGTAGCCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: LLIAVNSQEYTKADTENRMKSRS*PICSQL Trigger: GAGCTGGCTACAAATGGGCAAAGACCTGCTTTTCAT...CCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGCTATGAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
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| CDS-3UTR CAA 90 bp | GCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGCCCATCGAGTTTCTCTTCCTCATGTaGGTAACATGGTGGCATTTT | + |
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Preference number: 5 (lower is better) Translates to: AVNSQEYTKADTENRPIEFLFLM*VTWWHF Trigger: AAAATGCCACCATGTTACCAACATGAGGAAGAGAAA...CTCGATGGGCCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044567.4 ENSMUST00000141191.8 |
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| CDS-3UTR CAA 90 bp | GCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGCCCATCGAGTCAATTTCTGTCCAGTaGACAGCAACTTCTGCTATT | + |
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Preference number: 5 (lower is better) Translates to: AVNSQEYTKADTENRPIESISVQ*TATSAI Trigger: AATAGCAGAAGTTGCTGTCAACTGGACAGAAATTGA...CTCGATGGGCCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
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| CDS-3UTR CAA 90 bp | TCTGAGAGAAAACATAGGGACCCATTTCTTGTCAGATGTCAACAGGTTGTTATCTTTCTCTTCCTCATGTaGGTAACATGGTGGCATTTT | + |
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Preference number: 5 (lower is better) Translates to: SERKHRDPFLVRCQQVVIFLFLM*VTWWHF Trigger: AAAATGCCACCATGTTACCAACATGAGGAAGAGAAA...GATAACAACCTGTTGACATCTGACAAGAAATGGGTCCCTATGTTTTCTCTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155273.2 |
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| CDS-3UTR CAA 90 bp | CTCCTCATAGCAGTTAATTCTCAAGAATATACAAAGGCAGATACTGAGAACAGGTTCTGCTATTGGGATTaGAAGACACTGTGCTATGTA | + |
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Preference number: 5 (lower is better) Translates to: LLIAVNSQEYTKADTENRFCYWD*KTLCYV Trigger: TACATAGCACAGTGTCTTCAAATCCCAATAGCAGAA...CCTGTTCTCAGTATCTGCCTTTGTATATTCTTGAGAATTAACTGCTATGAGGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044567.4 |
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| CDS CCA 72 bp | GTAGGCGAGTCCCAGATGCTGGGGAGAGCTTCCTTCTaGCCTTTGGCATTGAGGAAGAATTTCTCTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: VGESQMLGRASF*PLALRKNFSSS Trigger: TGAGGAAGAGAAATTCTTCCTCAATGCCAAAGGCCAGAAGGAAGCTCTCCCCAGCATCTGGGACTCGCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044567.4 ENSMUST00000141191.8 ENSMUST00000155273.2 |
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| CDS CAA 90 bp | TTCCTTCTGGCCTTTGGCATTGAGGAAGAATTTCTCTTCCTCATGTaGGTAACATGGTGGCATTTTTGTAGCAGTTATAAACGCCACAAT | + |
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Preference number: 6 (lower is better) Translates to: FLLAFGIEEEFLFLM*VTWWHFCSSYKRHN Trigger: ATTGTGGCGTTTATAACTGCTACAAAAATGCCACCATGTTACCAACATGAGGAAGAGAAATTCTTCCTCAATGCCAAAGGCCAGAAGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044567.4 ENSMUST00000141191.8 ENSMUST00000155273.2 |
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| CDS CCA 72 bp | GAGGAAGAATTTCTCTTCCTCATGTTGGTAACATGGTaGCATTTTTGTAGCAGTTATAAACGCCACAATGGA | + |
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Preference number: 6 (lower is better) Translates to: EEEFLFLMLVTW*HFCSSYKRHNG Trigger: TCCATTGTGGCGTTTATAACTGCTACAAAAATGCCACCATGTTACCAACATGAGGAAGAGAAATTCTTCCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044567.4 ENSMUST00000141191.8 ENSMUST00000155273.2 |
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| CDS CAA 72 bp | GCCTTTGGCATTGAGGAAGAATTTCTCTTCCTCATGTaGGTAACATGGTGGCATTTTTGTAGCAGTTATAAA | + |
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Preference number: 6 (lower is better) Translates to: AFGIEEEFLFLM*VTWWHFCSSYK Trigger: TTTATAACTGCTACAAAAATGCCACCATGTTACCAACATGAGGAAGAGAAATTCTTCCTCAATGCCAAAGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044567.4 ENSMUST00000141191.8 ENSMUST00000155273.2 |
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