Pregenerated sensors for ALG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039740Ensembl transcript IDs: ENSMUST00000044148.3, ENSMUST00000143104.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGTTTGCTATTTTAGAGAACTCTAATACAGTTCCCAAAGGCCTGTaGCCTGAGGCCTGGTCCCCGGCCCACACTGAGAGCCACACTAGG | + |
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Preference number: 1 (lower is better) Translates to: LFAILENSNTVPKGL*PEAWSPAHTESHTR Trigger: CCTAGTGTGGCTCTCAGTGTGGGCCGGGGACCAGGCCTCAGGGCACAGGCCTTTGGGAACTGTATTAGAGTTCTCTAAAATAGCAAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR CCA 90 bp | GCTGGCAGCCTATACAAGGACATGGAAGTAGGGAGCGTTTGCTCTTaGCTTGCTTGTCCTTACCTTGCTGGCAAGTCCATCCCTTCACCG | + |
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Preference number: 1 (lower is better) Translates to: AGSLYKDMEVGSVCS*LACPYLAGKSIPSP Trigger: CGGTGAAGGGATGGACTTGCCAGCAAGGTAAGGACAAGCAAGCCAAGAGCAAACGCTCCCTACTTCCATGTCCTTGTATAGGCTGCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR CCA 90 bp | CTTCAAGTGGGAAAACGTACCTCTAGTCTGCGCCATGCCTTCTGCTaGCAGCCTATACAAGGACATGGAAGTAGGGAGCGTTTGCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: LQVGKRTSSLRHAFC*QPIQGHGSRERLLL Trigger: CAAGAGCAAACGCTCCCTACTTCCATGTCCTTGTATAGGCTGCCAGCAGAAGGCATGGCGCAGACTAGAGGTACGTTTTCCCACTTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR TCA 90 bp | GCGTCAGAGCCTACTTTGGGATTCCAGTGTATACTGAAGATCAGCTaGGACATTCAGCCTCCTGGACTGAACAACTACTGGATTTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: ASEPTLGFQCILKIS*DIQPPGLNNYWISG Trigger: TCCAGAAATCCAGTAGTTGTTCAGTCCAGGAGGCTGAATGTCTCAGCTGATCTTCAGTATACACTGGAATCCCAAAGTAGGCTCTGACGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR TCA 90 bp | CGAGGGCTGGAGACACCAACAACATTAAGAAACACGTCTGAAATATaGAGCTTAGTATATAGTTCAGATGCGGAGTGTCCCCGGTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: RGLETPTTLRNTSEI*SLVYSSDAECPRWW Trigger: CCACCACCGGGGACACTCCGCATCTGAACTATATACTAAGCTTCATATTTCAGACGTGTTTCTTAATGTTGTTGGTGTCTCCAGCCCTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR CCA 90 bp | CTTAACTTGAAGTTGGCAGGTCTTCCTTTAATTCTGATCTTCAAGTaGGAAAACGTACCTCTAGTCTGCGCCATGCCTTCTGCTGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: LNLKLAGLPLILIFK*ENVPLVCAMPSAGS Trigger: GCTGCCAGCAGAAGGCATGGCGCAGACTAGAGGTACGTTTTCCCACTTGAAGATCAGAATTAAAGGAAGACCTGCCAACTTCAAGTTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR GCA 90 bp | CTTCCTTTAATTCTGATCTTCAAGTGGGAAAACGTACCTCTAGTCTaGGCCATGCCTTCTGCTGGCAGCCTATACAAGGACATGGAAGTA | + |
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Preference number: 1 (lower is better) Translates to: LPLILIFKWENVPLV*AMPSAGSLYKDMEV Trigger: TACTTCCATGTCCTTGTATAGGCTGCCAGCAGAAGGCATGGCGCAGACTAGAGGTACGTTTTCCCACTTGAAGATCAGAATTAAAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR CCA 90 bp | GACTCCATCTGGATTGAACTAAAATCTAACAATGGAGGGCACACCTaGGAGGGATTTTTGCTTAACTTGAAGTTGGCAGGTCTTCCTTTA | + |
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Preference number: 1 (lower is better) Translates to: DSIWIELKSNNGGHT*EGFLLNLKLAGLPL Trigger: TAAAGGAAGACCTGCCAACTTCAAGTTAAGCAAAAATCCCTCCCAGGTGTGCCCTCCATTGTTAGATTTTAGTTCAATCCAGATGGAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR TCA 90 bp | CTCACGAGATACGGAATGATTACAGCATTAAGAATATTTCAGAAATaGCAGGTAGGTGTGGTGGACAGGTGGCTCACATTCAAGACTCAA | + |
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Preference number: 1 (lower is better) Translates to: LTRYGMITALRIFQK*QVGVVDRWLTFKTQ Trigger: TTGAGTCTTGAATGTGAGCCACCTGTCCACCACACCTACCTGTCATTTCTGAAATATTCTTAATGCTGTAATCATTCCGTATCTCGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGGTCCCCGGCCCACACTGAGAGCCACACTAGGAGGTGACAGGACTTTTAGTGGTGTGGTGGACAGGTaGCTCACATTCAAGACTCAA | + |
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Preference number: 2 (lower is better) Translates to: PGPRPTLRATLGGDRTFSGVVDR*LTFKTQ Trigger: TTGAGTCTTGAATGTGAGCCACCTGTCCACCACACC...ACTAAAAGTCCTGTCACCTCCTAGTGTGGCTCTCAGTGTGGGCCGGGGACCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGGTCCCCGGCCCACACTGAGAGCCACACTAGGAGGTGACAGGACTTTTAGTATGTATTTAACAAGATaGAGTCAGAGCATCGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: PGPRPTLRATLGGDRTFSMYLTR*SQSIGL Trigger: GAGCCCGATGCTCTGACTTCATCTTGTTAAATACAT...ACTAAAAGTCCTGTCACCTCCTAGTGTGGCTCTCAGTGTGGGCCGGGGACCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR GCA 90 bp | CCTTCTGCTGGCAGCCTATACAAGGACATGGAAGTAGGGAGCGTTTGCTCTTGGGACCCTTTTTGTCTTTaGTCCCTGCCTCAATACACT | + |
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Preference number: 2 (lower is better) Translates to: PSAGSLYKDMEVGSVCSWDPFCL*SLPQYT Trigger: AGTGTATTGAGGCAGGGAGCAAAGACAAAAAGGGTC...CCAAGAGCAAACGCTCCCTACTTCCATGTCCTTGTATAGGCTGCCAGCAGAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR CCA 90 bp | CCTTCTGCTGGCAGCCTATACAAGGACATGGAAGTAGGGAGCGTTTGCTCTTGGAGACATTCAGCCTCCTaGACTGAACAACTACTGGAT | + |
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Preference number: 2 (lower is better) Translates to: PSAGSLYKDMEVGSVCSWRHSAS*TEQLLD Trigger: ATCCAGTAGTTGTTCAGTCCAGGAGGCTGAATGTCT...CCAAGAGCAAACGCTCCCTACTTCCATGTCCTTGTATAGGCTGCCAGCAGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR TCA 90 bp | AACAACGAACAGTTATTACTGGGCAGTGTCACAGGGATAGGGGAGTTGAGAGGTTTCAGCCTCCTGGACTaGACAACTACTGGATTTCTG | + |
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Preference number: 2 (lower is better) Translates to: NNEQLLLGSVTGIGELRGFSLLD*TTTGFL Trigger: CAGAAATCCAGTAGTTGTTCAGTCCAGGAGGCTGAA...ACCTCTCAACTCCCCTATCCCTGTGACACTGCCCAGTAATAACTGTTCGTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR GCA 90 bp | GTCAAGCAAGCTTCACACAAAGGCATTTACGTGAAGGACAGGAAACACTGGCATCGTTTGCTCTTGGCTTaGTTGTCCTTACCTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: VKQASHKGIYVKDRKHWHRLLLA*LSLPCW Trigger: CCAGCAAGGTAAGGACAAGCAAGCCAAGAGCAAACG...ATGCCAGTGTTTCCTGTCCTTCACGTAAATGCCTTTGTGTGAAGCTTGCTTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR CCA 90 bp | CACAAAGGCATTTACGTGAAGGACAGGAAACACTGGCATGCTAAACTGCAGAGAGGGAGCGTTTGCTCTTaGCTTGCTTGTCCTTACCTT | + |
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Preference number: 2 (lower is better) Translates to: HKGIYVKDRKHWHAKLQRGSVCS*LACPYL Trigger: AAGGTAAGGACAAGCAAGCCAAGAGCAAACGCTCCC...TCTCTGCAGTTTAGCATGCCAGTGTTTCCTGTCCTTCACGTAAATGCCTTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR CCA 90 bp | AACAACGAACAGTTATTACTGGGCAGTGTCACAGGGATAGGGGAGTTGAGAGGTGGACTGAACAACTACTaGATTTCTGGACTTTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: NNEQLLLGSVTGIGELRGGLNNY*ISGLSV Trigger: AACAGAAAGTCCAGAAATCCAGTAGTTGTTCAGTCC...ACCTCTCAACTCCCCTATCCCTGTGACACTGCCCAGTAATAACTGTTCGTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR CAA 90 bp | TTTCTGTTCATTGTTGGATTAGCTGGACAGAAGCCTGTACGCCATTaGTTCTTCTTCTTCTGGGAATTCATTCTGTTAAGTGCTGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: FLFIVGLAGQKPVRH*FFFFWEFILLSAVC Trigger: GCAAACAGCACTTAACAGAATGAATTCCCAGAAGAAGAAGAACAAATGGCGTACAGGCTTCTGTCCAGCTAATCCAACAATGAACAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR TCA 90 bp | CAATTGACTGTGACAATGGTAAGACCTACACTACTAAAGCCAATTAAGGCACTGAGAATATTTCAGAAATaGCAGGTAGGTGTGGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: QLTVTMVRPTLLKPIKALRIFQK*QVGVVD Trigger: GTCCACCACACCTACCTGTCATTTCTGAAATATTCT...CAGTGCCTTAATTGGCTTTAGTAGTGTAGGTCTTACCATTGTCACAGTCAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTTTAATTCTGATCTTCAAGTGGGAAAACGTACCTCTAGTCTGCGCCATGCAACTACTGGATTTCTaGACTTTCTGTTCATTGTTG | + |
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Preference number: 2 (lower is better) Translates to: LPLILIFKWENVPLVCAMQLLDF*TFCSLL Trigger: CAACAATGAACAGAAAGTCCAGAAATCCAGTAGTTG...CATGGCGCAGACTAGAGGTACGTTTTCCCACTTGAAGATCAGAATTAAAGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR CCA 90 bp | GTCAAGCAAGCTTCACACAAAGGCATTTACGTGAAGGACAGGAAACACTGGCATCAACTTGACTCCATCTaGATTGAACTAAAATCTAAC | + |
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Preference number: 2 (lower is better) Translates to: VKQASHKGIYVKDRKHWHQLDSI*IELKSN Trigger: GTTAGATTTTAGTTCAATCCAGATGGAGTCAAGTTG...ATGCCAGTGTTTCCTGTCCTTCACGTAAATGCCTTTGTGTGAAGCTTGCTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR CAA 90 bp | ATTGAACTAAAATCTAACAATGGAGGGCACACCTGGGAGGGATTTTaGCTTAACTTGAAGTTGGCAGGTCTTCCTTTAATTCTGATCTTC | + |
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Preference number: 2 (lower is better) Translates to: IELKSNNGGHTWEGF*LNLKLAGLPLILIF Trigger: GAAGATCAGAATTAAAGGAAGACCTGCCAACTTCAAGTTAAGCAAAAATCCCTCCCAGGTGTGCCCTCCATTGTTAGATTTTAGTTCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR CCA 90 bp | ATATTTTCTAGAAAGGGATATGGGACCCTTTTTGTCTTTGCTCCCTGCCTCAATTTTCCCCCTTTCTTTTaGTTTCAAAGGCGTTTCTAC | + |
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Preference number: 2 (lower is better) Translates to: IFSRKGYGTLFVFAPCLNFPPFF*FQRRFY Trigger: GTAGAAACGCCTTTGAAACCAAAAGAAAGGGGGAAA...ATTGAGGCAGGGAGCAAAGACAAAAAGGGTCCCATATCCCTTTCTAGAAAATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR CCA 72 bp | TCTAATACAGTTCCCAAAGGCCTGTGCCCTGAGGCCTaGTCCCCGGCCCACACTGAGAGCCACACTAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SNTVPKGLCPEA*SPAHTESHTRR Trigger: CCTCCTAGTGTGGCTCTCAGTGTGGGCCGGGGACCAGGCCTCAGGGCACAGGCCTTTGGGAACTGTATTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR GCA 72 bp | ATTTTAGAGAACTCTAATACAGTTCCCAAAGGCCTGTaGCCTGAGGCCTGGTCCCCGGCCCACACTGAGAGC | + |
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Preference number: 3 (lower is better) Translates to: ILENSNTVPKGL*PEAWSPAHTES Trigger: GCTCTCAGTGTGGGCCGGGGACCAGGCCTCAGGGCACAGGCCTTTGGGAACTGTATTAGAGTTCTCTAAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR CAA 90 bp | CCTTCTGCTGGCAGCCTATACAAGGACATGGAAGTAGGGAGCGTTTGCTCTTGGTTAAGTAAACCGAGCTaGGGAGCTGCAGCAGCCTCG | + |
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Preference number: 3 (lower is better) Translates to: PSAGSLYKDMEVGSVCSWLSKPS*GAAAAS Trigger: CGAGGCTGCTGCAGCTCCCAAGCTCGGTTTACTTAA...CCAAGAGCAAACGCTCCCTACTTCCATGTCCTTGTATAGGCTGCCAGCAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR CAA 90 bp | GAACAGTTATTACTGGGCAGTGTCACAGGGATAGGGGAGTTGAGAGGTGGGGTGGGAAGTAGGGAGCGTTaGCTCTTGGCTTGCTTGTCC | + |
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Preference number: 3 (lower is better) Translates to: EQLLLGSVTGIGELRGGVGSRER*LLACLS Trigger: GGACAAGCAAGCCAAGAGCAAACGCTCCCTACTTCC...CACCCCACCTCTCAACTCCCCTATCCCTGTGACACTGCCCAGTAATAACTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR CCA 72 bp | GGAAAACGTACCTCTAGTCTGCGCCATGCCTTCTGCTaGCAGCCTATACAAGGACATGGAAGTAGGGAGCGT | + |
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Preference number: 3 (lower is better) Translates to: GKRTSSLRHAFC*QPIQGHGSRER Trigger: ACGCTCCCTACTTCCATGTCCTTGTATAGGCTGCCAGCAGAAGGCATGGCGCAGACTAGAGGTACGTTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR GCA 72 bp | CAAGGACATGGAAGTAGGGAGCGTTTGCTCTTGGCTTaGTTGTCCTTACCTTGCTGGCAAGTCCATCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: QGHGSRERLLLA*LSLPCWQVHPF Trigger: GAAGGGATGGACTTGCCAGCAAGGTAAGGACAAGCAAGCCAAGAGCAAACGCTCCCTACTTCCATGTCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR CAA 90 bp | AACAACGAACAGTTATTACTGGGCAGTGTCACAGGGATAGGGGAGTTGAGAGGTGCGTTTGCTCTTGGCTaGCTTGTCCTTACCTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: NNEQLLLGSVTGIGELRGAFALG*LVLTLL Trigger: CAGCAAGGTAAGGACAAGCAAGCCAAGAGCAAACGC...ACCTCTCAACTCCCCTATCCCTGTGACACTGCCCAGTAATAACTGTTCGTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR CCA 72 bp | CTATACAAGGACATGGAAGTAGGGAGCGTTTGCTCTTaGCTTGCTTGTCCTTACCTTGCTGGCAAGTCCATC | + |
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Preference number: 3 (lower is better) Translates to: LYKDMEVGSVCS*LACPYLAGKSI Trigger: GATGGACTTGCCAGCAAGGTAAGGACAAGCAAGCCAAGAGCAAACGCTCCCTACTTCCATGTCCTTGTATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR CAA 90 bp | AACAACGAACAGTTATTACTGGGCAGTGTCACAGGGATAGGGGAGTTGAGAGGTGATATGGGACCCTTTTaGTCTTTGCTCCCTGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: NNEQLLLGSVTGIGELRGDMGPF*SLLPAS Trigger: TGAGGCAGGGAGCAAAGACAAAAAGGGTCCCATATC...ACCTCTCAACTCCCCTATCCCTGTGACACTGCCCAGTAATAACTGTTCGTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR TCA 72 bp | GGGGTGTCAAGCAAGCTTCACACAAAGGCATTTACGTaGAGGACAGGAAACACTGGCATGCTAAACTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: GVSSKLHTKAFT*RTGNTGMLNCR Trigger: TCTGCAGTTTAGCATGCCAGTGTTTCCTGTCCTTCACGTAAATGCCTTTGTGTGAAGCTTGCTTGACACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR GCA 72 bp | AGAAAGGGATATGGGACCCTTTTTGTCTTTGCTCCCTaGCTCAATACACTGTTCTGGCACAGGCTCAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: RKGYGTLFVFAP*LNTLFWHRLKG Trigger: TCCTTTGAGCCTGTGCCAGAACAGTGTATTGAGGCAGGGAGCAAAGACAAAAAGGGTCCCATATCCCTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR CCA 72 bp | CTTTTTGTCTTTGCTCCCTGCCTCAATACACTGTTCTaGCACAGGCTCAAAGGAATAAGGCCAAGCGTGACA | + |
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Preference number: 3 (lower is better) Translates to: LFVFAPCLNTLF*HRLKGIRPSVT Trigger: TGTCACGCTTGGCCTTATTCCTTTGAGCCTGTGCCAGAACAGTGTATTGAGGCAGGGAGCAAAGACAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR TCA 72 bp | CCTACTTTGGGATTCCAGTGTATACTGAAGATCAGCTaGGACATTCAGCCTCCTGGACTGAACAACTACTGG | + |
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Preference number: 3 (lower is better) Translates to: PTLGFQCILKIS*DIQPPGLNNYW Trigger: CCAGTAGTTGTTCAGTCCAGGAGGCTGAATGTCTCAGCTGATCTTCAGTATACACTGGAATCCCAAAGTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR CAA 90 bp | GGACTGAACAACTACTGGATTTCTGGACTTTCTGTTCATTGTTGGATTAGCTGGGGACCCTTTTTGTCTTaGCTCCCTGCCTCAATACAC | + |
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Preference number: 3 (lower is better) Translates to: GLNNYWISGLSVHCWISWGPFLS*LPASIH Trigger: GTGTATTGAGGCAGGGAGCAAAGACAAAAAGGGTCC...CCAGCTAATCCAACAATGAACAGAAAGTCCAGAAATCCAGTAGTTGTTCAGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR CAA 90 bp | AACAACGAACAGTTATTACTGGGCAGTGTCACAGGGATAGGGGAGTTGAGAGGTTTCTTGGTTGTCAACTaGACTCCATCTGGATTGAAC | + |
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Preference number: 3 (lower is better) Translates to: NNEQLLLGSVTGIGELRGFLVVN*TPSGLN Trigger: GTTCAATCCAGATGGAGTCAAGTTGACAACCAAGAA...ACCTCTCAACTCCCCTATCCCTGTGACACTGCCCAGTAATAACTGTTCGTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR-3UTR CAA 90 bp | AGAGAATACGATACAAACACTACGAGGGCTGGAGACACCAACAACATTAAGAAACGGTGGTGGCCATTCTaGGTTGTCAACTTGACTCCA | + |
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Preference number: 3 (lower is better) Translates to: REYDTNTTRAGDTNNIKKRWWPF*VVNLTP Trigger: TGGAGTCAAGTTGACAACCAAGAATGGCCACCACCG...TTTCTTAATGTTGTTGGTGTCTCCAGCCCTCGTAGTGTTTGTATCGTATTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR CCA 72 bp | GTGTATACTGAAGATCAGCTGAGACATTCAGCCTCCTaGACTGAACAACTACTGGATTTCTGGACTTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: VYTEDQLRHSAS*TEQLLDFWTFC Trigger: ACAGAAAGTCCAGAAATCCAGTAGTTGTTCAGTCCAGGAGGCTGAATGTCTCAGCTGATCTTCAGTATACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR CCA 72 bp | TGGATTGAACTAAAATCTAACAATGGAGGGCACACCTaGGAGGGATTTTTGCTTAACTTGAAGTTGGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: WIELKSNNGGHT*EGFLLNLKLAG Trigger: ACCTGCCAACTTCAAGTTAAGCAAAAATCCCTCCCAGGTGTGCCCTCCATTGTTAGATTTTAGTTCAATCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR TCA 72 bp | TACGGAATGATTACAGCATTAAGAATATTTCAGAAATaGCAGGTAGGTGTGGTGGACAGGTGGCTCACATTC | + |
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Preference number: 3 (lower is better) Translates to: YGMITALRIFQK*QVGVVDRWLTF Trigger: GAATGTGAGCCACCTGTCCACCACACCTACCTGTCATTTCTGAAATATTCTTAATGCTGTAATCATTCCGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR CCA 72 bp | TGGATTTCTGGACTTTCTGTTCATTGTTGGATTAGCTaGACAGAAGCCTGTACGCCATTTGTTCTTCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: WISGLSVHCWIS*TEACTPFVLLL Trigger: AAGAAGAAGAACAAATGGCGTACAGGCTTCTGTCCAGCTAATCCAACAATGAACAGAAAGTCCAGAAATCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR CCA 72 bp | AACAACTACTGGATTTCTGGACTTTCTGTTCATTGTTaGATTAGCTGGACAGAAGCCTGTACGCCATTTGTT | + |
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Preference number: 3 (lower is better) Translates to: NNYWISGLSVHC*ISWTEACTPFV Trigger: AACAAATGGCGTACAGGCTTCTGTCCAGCTAATCCAACAATGAACAGAAAGTCCAGAAATCCAGTAGTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR TCA 72 bp | GAGACACCAACAACATTAAGAAACACGTCTGAAATATaGAGCTTAGTATATAGTTCAGATGCGGAGTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: ETPTTLRNTSEI*SLVYSSDAECP Trigger: GGGACACTCCGCATCTGAACTATATACTAAGCTTCATATTTCAGACGTGTTTCTTAATGTTGTTGGTGTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS-3UTR GCA 90 bp | CCTGGTCCCCGGCCCACACTGAGAGCCACACTAGGAGGTGACAGGACTTTTAGTCCTCCAGAGGGACGATaGCAAAGTGCTCGTTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: PGPRPTLRATLGGDRTFSPPEGR*QSARCS Trigger: CGAGCAACGAGCACTTTGGCATCGTCCCTCTGGAGG...ACTAAAAGTCCTGTCACCTCCTAGTGTGGCTCTCAGTGTGGGCCGGGGACCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS-3UTR CCA 90 bp | AACTCTAATACAGTTCCCAAAGGCCTGTGCCCTGAGGCCTGGTCCCCGGCCCACCAGCGAGGCCCATCGTaGCTTTTAAGGATGGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: NSNTVPKGLCPEAWSPAHQRGPS*LLRMVC Trigger: ACAAACCATCCTTAAAAGCCACGATGGGCCTCGCTG...GTGGGCCGGGGACCAGGCCTCAGGGCACAGGCCTTTGGGAACTGTATTAGAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| 3UTR CAA 72 bp | GGACATGGAAGTAGGGAGCGTTTGCTCTTGGCTTGCTaGTCCTTACCTTGCTGGCAAGTCCATCCCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: GHGSRERLLLAC*SLPCWQVHPFT Trigger: GGTGAAGGGATGGACTTGCCAGCAAGGTAAGGACAAGCAAGCCAAGAGCAAACGCTCCCTACTTCCATGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR GCA 90 bp | GGACCCTTTTTGTCTTTGCTCCCTGCCTCAATACACTGTTCTGGCACAGGCTCAGCGATGACTGGGCACTaGATGTACATGGCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GPFLSLLPASIHCSGTGSAMTGH*MYMASR Trigger: TCTGGAGGCCATGTACATGCAGTGCCCAGTCATCGC...TGAGCCTGTGCCAGAACAGTGTATTGAGGCAGGGAGCAAAGACAAAAAGGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR GCA 90 bp | GAACAGTTATTACTGGGCAGTGTCACAGGGATAGGGGAGTTGAGAGGTGGGGTGATACCCATGTCTGGGTaGAGAAACAGCACAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: EQLLLGSVTGIGELRGGVIPMSG*RNSTDG Trigger: CCCATCTGTGCTGTTTCTGCACCCAGACATGGGTAT...CACCCCACCTCTCAACTCCCCTATCCCTGTGACACTGCCCAGTAATAACTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR CCA 90 bp | CCTTCTGCTGGCAGCCTATACAAGGACATGGAAGTAGGGAGCGTTTGCTCTTGGGGAATTGCTTCCCCTTaGGGACGAGGTCATCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: PSAGSLYKDMEVGSVCSWGIASP*GRGHLS Trigger: AGATAGATGACCTCGTCCCCAAGGGGAAGCAATTCC...CCAAGAGCAAACGCTCCCTACTTCCATGTCCTTGTATAGGCTGCCAGCAGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR TCA 90 bp | CTTCCTTTAATTCTGATCTTCAAGTGGGAAAACGTACCTCTAGTCTGCGCCATGGCCGTCTGGCCAGTTTaGACACCGGGATACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPLILIFKWENVPLVCAMAVWPV*TPGYRQ Trigger: CTGCCTGTATCCCGGTGTTCAAACTGGCCAGACGGC...CATGGCGCAGACTAGAGGTACGTTTTCCCACTTGAAGATCAGAATTAAAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR TCA 90 bp | GAACAGTTATTACTGGGCAGTGTCACAGGGATAGGGGAGTTGAGAGGTGGGGTGAGGATGGTTTGTGGATaGACTTCTCCATGGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EQLLLGSVTGIGELRGGVRMVCG*TSPWLL Trigger: CAGAAGCCATGGAGAAGTTCATCCACAAACCATCCT...CACCCCACCTCTCAACTCCCCTATCCCTGTGACACTGCCCAGTAATAACTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR GCA 90 bp | GGACTGAACAACTACTGGATTTCTGGACTTTCTGTTCATTGTTGGATTAGCTGGAGGCAGCCAGTCCCCTaGGCATTGCACCGAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLNNYWISGLSVHCWISWRQPVP*ALHREL Trigger: GAGCTCTCGGTGCAATGCGCAGGGGACTGGCTGCCT...CCAGCTAATCCAACAATGAACAGAAAGTCCAGAAATCCAGTAGTTGTTCAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR CCA 90 bp | CACAAAGGCATTTACGTGAAGGACAGGAAACACTGGCATGCTAAACTGCAGAGAAACCCCGTGACCTTGTaGACAATGGACTCCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HKGIYVKDRKHWHAKLQRNPVTL*TMDSRG Trigger: GCCCCTGGAGTCCATTGTCCACAAGGTCACGGGGTT...TCTCTGCAGTTTAGCATGCCAGTGTTTCCTGTCCTTCACGTAAATGCCTTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR CCA 90 bp | GTAAACCGAGCTTGGGAGCTGCAGCAGCCTCGTTCCCATTACGCTCTGAAGTCAACATACTGGTACAGCTaGTCTGCAAATGCATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VNRAWELQQPRSHYALKSTYWYS*SANASA Trigger: AGCTGATGCATTTGCAGACCAGCTGTACCAGTATGT...TGACTTCAGAGCGTAATGGGAACGAGGCTGCTGCAGCTCCCAAGCTCGGTTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR GCA 90 bp | CTGAGACATTCAGCCTCCTGGACTGAACAACTACTGGATTTCTGGACTTTCTGTGAGAGGAACAGGAATTaGTTCCCCTTGGGGACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRHSASWTEQLLDFWTFCERNRN*FPLGTR Trigger: CCTCGTCCCCAAGGGGAAGCAATTCCTGTTCCTCTC...ACAGAAAGTCCAGAAATCCAGTAGTTGTTCAGTCCAGGAGGCTGAATGTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR TCA 90 bp | GGACCCTTTTTGTCTTTGCTCCCTGCCTCAATACACTGTTCTGGCACAGGCTCAACATCAGGATTTCTGTaGGACAGGGTCTTGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPFLSLLPASIHCSGTGSTSGFL*DRVLKV Trigger: AACCTTCAAGACCCTGTCTCACAGAAATCCTGATGT...TGAGCCTGTGCCAGAACAGTGTATTGAGGCAGGGAGCAAAGACAAAAAGGGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR TCA 90 bp | CTTCCTTTAATTCTGATCTTCAAGTGGGAAAACGTACCTCTAGTCTGCGCCATGCTTCTCCATGGCTTCTaGGAAGTGCACTGGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLILIFKWENVPLVCAMLLHGF*EVHWVW Trigger: CCAGACCCAGTGCACTTCTCAGAAGCCATGGAGAAG...CATGGCGCAGACTAGAGGTACGTTTTCCCACTTGAAGATCAGAATTAAAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR GCA 90 bp | TCGGGCTCAGATCTAATGTTCTATTCTCTTCTGATGCCAAACATATTTTATTGTTCACAGCCGTACTCCTaGAGCGCCAGCGCCGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGSDLMFYSLLMPNIFYCSQPYS*SASAAS Trigger: GGACGCGGCGCTGGCGCTGCAGGAGTACGGCTGTGA...ACAATAAAATATGTTTGGCATCAGAAGAGAATAGAACATTAGATCTGAGCCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR GCA 90 bp | CACAAAGGCATTTACGTGAAGGACAGGAAACACTGGCATGCTAAACTGCAGAGAGACCAAGATGCGGTCTaGCATGCCTGTGGTGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: HKGIYVKDRKHWHAKLQRDQDAV*HACGVF Trigger: GAATACACCACAGGCATGGCAGACCGCATCTTGGTC...TCTCTGCAGTTTAGCATGCCAGTGTTTCCTGTCCTTCACGTAAATGCCTTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR CCA 90 bp | CTGGACAGAAGCCTGTACGCCATTTGTTCTTCTTCTTCTGGGAATTCATTCTGTCCTCGATCCAGTCGATaGGGGCCCTGTAGAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDRSLYAICSSSSGNSFCPRSSR*GPCRTS Trigger: AGAAGTTCTACAGGGCCCCCATCGACTGGATCGAGG...ACAGAATGAATTCCCAGAAGAAGAAGAACAAATGGCGTACAGGCTTCTGTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR CCA 90 bp | GTCAAGCAAGCTTCACACAAAGGCATTTACGTGAAGGACAGGAAACACTGGCATGGTCTGCCATGCCTGTaGTGTATTCCTCGATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VKQASHKGIYVKDRKHWHGLPCL*CIPRSS Trigger: ACTGGATCGAGGAATACACCACAGGCATGGCAGACC...ATGCCAGTGTTTCCTGTCCTTCACGTAAATGCCTTTGTGTGAAGCTTGCTTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR CCA 90 bp | CAATTGACTGTGACAATGGTAAGACCTACACTACTAAAGCCAATTAAGGCACTGACTTCTCCGCCACCCTaGCTTTTCCAGCGAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLTVTMVRPTLLKPIKALTSPPP*LFQRGP Trigger: TGGGCCTCGCTGGAAAAGCCAGGGTGGCGGAGAAGT...CAGTGCCTTAATTGGCTTTAGTAGTGTAGGTCTTACCATTGTCACAGTCAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR CCA 90 bp | AGAGAATACGATACAAACACTACGAGGGCTGGAGACACCAACAACATTAAGAAAGGCACTGCATGTACATaGCCTCCAGAGGGACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: REYDTNTTRAGDTNNIKKGTACT*PPEGRC Trigger: GCATCGTCCCTCTGGAGGCCATGTACATGCAGTGCC...TTTCTTAATGTTGTTGGTGTCTCCAGCCCTCGTAGTGTTTGTATCGTATTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR TCA 90 bp | GTCAAGCAAGCTTCACACAAAGGCATTTACGTGAAGGACAGGAAACACTGGCATAGAGCTGAATTTCTCTaGGTAAGCAGCAGATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VKQASHKGIYVKDRKHWHRAEFL*VSSRSG Trigger: CCCAGATCTGCTGCTTACTCAGAGAAATTCAGCTCT...ATGCCAGTGTTTCCTGTCCTTCACGTAAATGCCTTTGTGTGAAGCTTGCTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR TCA 90 bp | CTTCCTTTAATTCTGATCTTCAAGTGGGAAAACGTACCTCTAGTCTGCGCCATGTGCAAATGCATCAGCTaGAAACTTCTCCGCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLILIFKWENVPLVCAMCKCIS*KLLRHP Trigger: AGGGTGGCGGAGAAGTTTTCAGCTGATGCATTTGCA...CATGGCGCAGACTAGAGGTACGTTTTCCCACTTGAAGATCAGAATTAAAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR GCA 90 bp | GGACTGAACAACTACTGGATTTCTGGACTTTCTGTTCATTGTTGGATTAGCTGGTGCCAAAGTGCTCGTTaGTCGGAGTGTAGAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GLNNYWISGLSVHCWISWCQSAR*SECRAH Trigger: GTGTGCTCTACACTCCGAGCAACGAGCACTTTGGCA...CCAGCTAATCCAACAATGAACAGAAAGTCCAGAAATCCAGTAGTTGTTCAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR CCA 90 bp | CACAAAGGCATTTACGTGAAGGACAGGAAACACTGGCATGCTAAACTGCAGAGAATTAACAGCGATGACTaGGCACTGCATGTACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: HKGIYVKDRKHWHAKLQRINSDD*ALHVHG Trigger: GCCATGTACATGCAGTGCCCAGTCATCGCTGTTAAT...TCTCTGCAGTTTAGCATGCCAGTGTTTCCTGTCCTTCACGTAAATGCCTTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR TCA 90 bp | TCGGGCTCAGATCTAATGTTCTATTCTCTTCTGATGCCAAACATATTTTATTGTGCAGCCGTGGAGGAGTaGGATCTTCTGTCTGTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SGSDLMFYSLLMPNIFYCAAVEE*DLLSVR Trigger: TCGGACAGACAGAAGATCTCACTCCTCCACGGCTGC...ACAATAAAATATGTTTGGCATCAGAAGAGAATAGAACATTAGATCTGAGCCCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR GCA 90 bp | ATGGTAAGACCTACACTACTAAAGCCAATTAAGGCACTGGATGATCAAACCTTTATGGCTTCTGAGAAGTaGACTGGGTCTGGCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: MVRPTLLKPIKALDDQTFMASEK*TGSGSH Trigger: GTGTGAGCCAGACCCAGTGCACTTCTCAGAAGCCAT...AAAGGTTTGATCATCCAGTGCCTTAATTGGCTTTAGTAGTGTAGGTCTTACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| 3UTR CAA 72 bp | GCACTAGATTCTAGCTCCTTTGTTTCCCCCTTTCTTTaGGTTTCAAAGGCGTTTCTACAACCCATAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALDSSSFVSPFL*VSKAFLQPIRG Trigger: CCCTCTTATGGGTTGTAGAAACGCCTTTGAAACCAAAAGAAAGGGGGAAACAAAGGAGCTAGAATCTAGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| 3UTR CAA 72 bp | CAGCCTCGTTCCCATTACGCTCTGAAGTCAAATCAATaGACTGTGACAATGGTAAGACCTACACTACTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QPRSHYALKSNQ*TVTMVRPTLLK Trigger: CTTTAGTAGTGTAGGTCTTACCATTGTCACAGTCAATTGATTTGACTTCAGAGCGTAATGGGAACGAGGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR TCA 90 bp | CAATTGACTGTGACAATGGTAAGACCTACACTACTAAAGCCAATTAAGGCACTGATGACGCTCAAGGTCTaGCTCTTGGACCATTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLTVTMVRPTLLKPIKALMTLKV*LLDHFL Trigger: AAGAAAATGGTCCAAGAGTCAGACCTTGAGCGTCAT...CAGTGCCTTAATTGGCTTTAGTAGTGTAGGTCTTACCATTGTCACAGTCAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR GCA 90 bp | ATATTTTCTAGAAAGGGATATGGGACCCTTTTTGTCTTTGCTCCCTGCCTCAATCACCAAGGATCTCAGTaGCAAGGGCAGATTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IFSRKGYGTLFVFAPCLNHQGSQ*QGQIFL Trigger: AAGAAAAATCTGCCCTTGGCACTGAGATCCTTGGTG...ATTGAGGCAGGGAGCAAAGACAAAAAGGGTCCCATATCCCTTTCTAGAAAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| 3UTR CAA 72 bp | AAATCTAACAATGGAGGGCACACCTGGGAGGGATTTTaGCTTAACTTGAAGTTGGCAGGTCTTCCTTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: KSNNGGHTWEGF*LNLKLAGLPLI Trigger: AATTAAAGGAAGACCTGCCAACTTCAAGTTAAGCAAAAATCCCTCCCAGGTGTGCCCTCCATTGTTAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR TCA 90 bp | AGAGAATACGATACAAACACTACGAGGGCTGGAGACACCAACAACATTAAGAAAGAACTTCTTCAGAGCTaGATTTCTCTGAGTAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: REYDTNTTRAGDTNNIKKELLQS*ISLSKQ Trigger: CTGCTTACTCAGAGAAATTCAGCTCTGAAGAAGTTC...TTTCTTAATGTTGTTGGTGTCTCCAGCCCTCGTAGTGTTTGTATCGTATTCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR CCA 90 bp | ATATTTTCTAGAAAGGGATATGGGACCCTTTTTGTCTTTGCTCCCTGCCTCAATTTTAAGGATGGTTTGTaGATGAACTTCTCCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IFSRKGYGTLFVFAPCLNFKDGL*MNFSMA Trigger: AGCCATGGAGAAGTTCATCCACAAACCATCCTTAAA...ATTGAGGCAGGGAGCAAAGACAAAAAGGGTCCCATATCCCTTTCTAGAAAATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS GCA 90 bp | CGGCCGCCCCAGCCCAGGCTGCGAGGCAGCCAGTCCCCTGCGCATTaGACCGAGAGCTCGCGGGTCTCGATGAAGCAGTGGTTCGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RPPQPRLRGSQSPAH*TESSRVSMKQWFGS Trigger: CGACCCGAACCACTGCTTCATCGAGACCCGCGAGCTCTCGGTGCAATGCGCAGGGGACTGGCTGCCTCGCAGCCTGGGCTGGGGCGGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS GCA 90 bp | ACTCCTCGCCGGAGAGAAACAGCACGTAGAGCGCCAGAAAGACCATaGGCACGTAGGAGCAGATGGCGGCGCCGCGGCCGCCCCAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TPRRRETARRAPERP*ARRSRWRRRGRPSP Trigger: TGGGCTGGGGCGGCCGCGGCGCCGCCATCTGCTCCTACGTGCGCATGGTCTTTCTGGCGCTCTACGTGCTGTTTCTCTCCGGCGAGGAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS TCA 90 bp | GCAGCCAGTCCCCTGCGCATTGCACCGAGAGCTCGCGGGTCTCGATaGAGCAGTGGTTCGGGTCGTAGTGCGCGGTCCATATCTTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: AASPLRIAPRARGSR*SSGSGRSARSISSH Trigger: ATGTGAAGATATGGACCGCGCACTACGACCCGAACCACTGCTTCATCGAGACCCGCGAGCTCTCGGTGCAATGCGCAGGGGACTGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR CAA 90 bp | AACTCTAATACAGTTCCCAAAGGCCTGTGCCCTGAGGCCTGGTCCCCGGCCCACAGGAACCCCGTGACCTaGTGGACAATGGACTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NSNTVPKGLCPEAWSPAHRNPVT*WTMDSR Trigger: CCTGGAGTCCATTGTCCACAAGGTCACGGGGTTCCT...GTGGGCCGGGGACCAGGCCTCAGGGCACAGGCCTTTGGGAACTGTATTAGAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS TCA 90 bp | CTCGTTGCTCGGAGTGTAGAGCACACACAAGCAGCCGTGGAGGAGTaGGATCTTCTGTCTGTCCGAGAAGGACCGCAGGAAGGTCACATG | + |
|
Preference number: 5 (lower is better) Translates to: LVARSVEHTQAAVEE*DLLSVREGPQEGHM Trigger: CATGTGACCTTCCTGCGGTCCTTCTCGGACAGACAGAAGATCTCACTCCTCCACGGCTGCTTGTGTGTGCTCTACACTCCGAGCAACGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS GCA 90 bp | ACTGCATGTACATGGCCTCCAGAGGGACGATGCCAAAGTGCTCGTTaGTCGGAGTGTAGAGCACACACAAGCAGCCGTGGAGGAGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TACTWPPEGRCQSAR*SECRAHTSSRGGVR Trigger: TCTCACTCCTCCACGGCTGCTTGTGTGTGCTCTACACTCCGAGCAACGAGCACTTTGGCATCGTCCCTCTGGAGGCCATGTACATGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS GCA 90 bp | ATGGACTCCAGGGGCCCACCGTTATTAACAGCGATGACTGGGCACTaGATGTACATGGCCTCCAGAGGGACGATGCCAAAGTGCTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: MDSRGPPLLTAMTGH*MYMASRGTMPKCSL Trigger: CAACGAGCACTTTGGCATCGTCCCTCTGGAGGCCATGTACATGCAGTGCCCAGTCATCGCTGTTAATAACGGTGGGCCCCTGGAGTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS CCA 90 bp | GTGGACAATGGACTCCAGGGGCCCACCGTTATTAACAGCGATGACTaGGCACTGCATGTACATGGCCTCCAGAGGGACGATGCCAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VDNGLQGPTVINSDD*ALHVHGLQRDDAKV Trigger: CACTTTGGCATCGTCCCTCTGGAGGCCATGTACATGCAGTGCCCAGTCATCGCTGTTAATAACGGTGGGCCCCTGGAGTCCATTGTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS CCA 90 bp | GAGAAGTGCACTGGGTCTGGCTCACACAGGAACCCCGTGACCTTGTaGACAATGGACTCCAGGGGCCCACCGTTATTAACAGCGATGACT | + |
|
Preference number: 5 (lower is better) Translates to: EKCTGSGSHRNPVTL*TMDSRGPPLLTAMT Trigger: AGTCATCGCTGTTAATAACGGTGGGCCCCTGGAGTCCATTGTCCACAAGGTCACGGGGTTCCTGTGTGAGCCAGACCCAGTGCACTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS TCA 90 bp | GGAAGTGACAGTAAAATAGGACCCTCTTACGCCGTCTGGCCAGTTTaGACACCGGGATACAGGCAGACACCTGGTCGCACACCACCACGT | + |
|
Preference number: 5 (lower is better) Translates to: GSDSKIGPSYAVWPV*TPGYRQTPGRTPPR Trigger: ACGTGGTGGTGTGCGACCAGGTGTCTGCCTGTATCCCGGTGTTCAAACTGGCCAGACGGCGTAAGAGGGTCCTATTTTACTGTCACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS TCA 90 bp | TTCCTCGATCCAGTCGATGGGGGCCCTGTAGAACTTCTTCAGAGCTaGATTTCTCTGAGTAAGCAGCAGATCTGGTCGCACACCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: FLDPVDGGPVELLQS*ISLSKQQIWSHTTT Trigger: CGTGGTGGTGTGCGACCAGATCTGCTGCTTACTCAGAGAAATTCAGCTCTGAAGAAGTTCTACAGGGCCCCCATCGACTGGATCGAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143104.2 |
||
| CDS CCA 90 bp | CTGGCTTTTCCAGCGAGGCCCATCGTGGCTTTTAAGGATGGTTTGTaGATGAACTTCTCCATGGCTTCTGAGAAGTGCACTGGGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LAFPARPIVAFKDGL*MNFSMASEKCTGSG Trigger: GCCAGACCCAGTGCACTTCTCAGAAGCCATGGAGAAGTTCATCCACAAACCATCCTTAAAAGCCACGATGGGCCTCGCTGGAAAAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR CAA 90 bp | GGACCCTTTTTGTCTTTGCTCCCTGCCTCAATACACTGTTCTGGCACAGGCTCAAGAGAGGAACAGGAATaGCTTCCCCTTGGGGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: GPFLSLLPASIHCSGTGSREEQE*LPLGDE Trigger: CTCGTCCCCAAGGGGAAGCAATTCCTGTTCCTCTCT...TGAGCCTGTGCCAGAACAGTGTATTGAGGCAGGGAGCAAAGACAAAAAGGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS TCA 90 bp | CTTTTCCAGCGAGGCCCATCGTGGCTTTTAAGGATGGTTTGTGGATaGACTTCTCCATGGCTTCTGAGAAGTGCACTGGGTCTGGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LFQRGPSWLLRMVCG*TSPWLLRSALGLAH Trigger: GTGAGCCAGACCCAGTGCACTTCTCAGAAGCCATGGAGAAGTTCATCCACAAACCATCCTTAAAAGCCACGATGGGCCTCGCTGGAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS-3UTR CAA 90 bp | CTGAGACATTCAGCCTCCTGGACTGAACAACTACTGGATTTCTGGACTTTCTGTCGCCGTCTGGCCAGTTaGAACACCGGGATACAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LRHSASWTEQLLDFWTFCRRLAS*NTGIQA Trigger: TGCCTGTATCCCGGTGTTCAAACTGGCCAGACGGCG...ACAGAAAGTCCAGAAATCCAGTAGTTGTTCAGTCCAGGAGGCTGAATGTCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
||
| CDS TCA 90 bp | AGTGCTCCACGTTCTCCGGGATCCTATCGTCATAACCACCGGCCATaGAGAGATGAACCTTATCCCACTCTTGAGATGGTAACCGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: SAPRSPGSYRHNHRP*RDEPYPTLEMVTDS Trigger: GGAATCGGTTACCATCTCAAGAGTGGGATAAGGTTCATCTCTTCATGGCCGGTGGTTATGACGATAGGATCCCGGAGAACGTGGAGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044148.3 ENSMUST00000143104.2 |
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| CDS GCA 90 bp | TTTAAGGATGGTTTGTGGATGAACTTCTCCATGGCTTCTGAGAAGTaGACTGGGTCTGGCTCACACAGGAACCCCGTGACCTTGTGGACA | + |
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Preference number: 5 (lower is better) Translates to: FKDGLWMNFSMASEK*TGSGSHRNPVTLWT Trigger: TGTCCACAAGGTCACGGGGTTCCTGTGTGAGCCAGACCCAGTGCACTTCTCAGAAGCCATGGAGAAGTTCATCCACAAACCATCCTTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS TCA 90 bp | TCTGTCCGAGAAGGACCGCAGGAAGGTCACATGACGCTCAAGGTCTaGCTCTTGGACCATTTTCTTCAACTCCTTATAGTGCTCCACGTT | + |
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Preference number: 5 (lower is better) Translates to: SVREGPQEGHMTLKV*LLDHFLQLLIVLHV Trigger: AACGTGGAGCACTATAAGGAGTTGAAGAAAATGGTCCAAGAGTCAGACCTTGAGCGTCATGTGACCTTCCTGCGGTCCTTCTCGGACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS TCA 90 bp | AGTGAGATCTTCTGTCTGTCCGAGAAGGACCGCAGGAAGGTCACATaGCGCTCAAGGTCTGACTCTTGGACCATTTTCTTCAACTCCTTA | + |
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Preference number: 5 (lower is better) Translates to: SEIFCLSEKDRRKVT*RSRSDSWTIFFNSL Trigger: TAAGGAGTTGAAGAAAATGGTCCAAGAGTCAGACCTTGAGCGTCATGTGACCTTCCTGCGGTCCTTCTCGGACAGACAGAAGATCTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS TCA 90 bp | TTCCTCGATCCAGTCGATGGGGGCCCTGTAGAACTTCTTCAGAGCTaGATTTCTCTGAGTAAGCAGCAGATCTGGGAAGTGACAGTAAAA | + |
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Preference number: 5 (lower is better) Translates to: FLDPVDGGPVELLQS*ISLSKQQIWEVTVK Trigger: TTTTACTGTCACTTCCCAGATCTGCTGCTTACTCAGAGAAATTCAGCTCTGAAGAAGTTCTACAGGGCCCCCATCGACTGGATCGAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS CCA 90 bp | TATCTTTTCAGGAATAGCCAAGTCAAAGCTGCCGATATTCAGAGATaGGTAGAGCACATCAGGATTTCTGTGAGACAGGGTCTTGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: YLFRNSQVKAADIQR*VEHIRISVRQGLEG Trigger: ACCTTCAAGACCCTGTCTCACAGAAATCCTGATGTGCTCTACCCATCTCTGAATATCGGCAGCTTTGACTTGGCTATTCCTGAAAAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044148.3 ENSMUST00000143104.2 |
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| CDS-3UTR CAA 90 bp | CTGAGACATTCAGCCTCCTGGACTGAACAACTACTGGATTTCTGGACTTTCTGTGCTTTTAAGGATGGTTaGTGGATGAACTTCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: LRHSASWTEQLLDFWTFCAFKDG*WMNFSM Trigger: CATGGAGAAGTTCATCCACAAACCATCCTTAAAAGC...ACAGAAAGTCCAGAAATCCAGTAGTTGTTCAGTCCAGGAGGCTGAATGTCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS-3UTR CAA 90 bp | ATATTTTCTAGAAAGGGATATGGGACCCTTTTTGTCTTTGCTCCCTGCCTCAATTTCCTTTCGTATCGGTaGATAGAGAGGAACAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: IFSRKGYGTLFVFAPCLNFLSYR*IERNRN Trigger: ATTCCTGTTCCTCTCTATCAACCGATACGAAAGGAA...ATTGAGGCAGGGAGCAAAGACAAAAAGGGTCCCATATCCCTTTCTAGAAAATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS GCA 72 bp | GCCGCCCCAGCCCAGGCTGCGAGGCAGCCAGTCCCCTaGGCATTGCACCGAGAGCTCGCGGGTCTCGATGAA | + |
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Preference number: 6 (lower is better) Translates to: AAPAQAARQPVP*ALHRELAGLDE Trigger: TTCATCGAGACCCGCGAGCTCTCGGTGCAATGCGCAGGGGACTGGCTGCCTCGCAGCCTGGGCTGGGGCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS GCA 72 bp | CAGCCCAGGCTGCGAGGCAGCCAGTCCCCTGCGCATTaGACCGAGAGCTCGCGGGTCTCGATGAAGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: QPRLRGSQSPAH*TESSRVSMKQW Trigger: CCACTGCTTCATCGAGACCCGCGAGCTCTCGGTGCAATGCGCAGGGGACTGGCTGCCTCGCAGCCTGGGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS GCA 72 bp | CGGAGAGAAACAGCACGTAGAGCGCCAGAAAGACCATaGGCACGTAGGAGCAGATGGCGGCGCCGCGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RRETARRAPERP*ARRSRWRRRGR Trigger: GCGGCCGCGGCGCCGCCATCTGCTCCTACGTGCGCATGGTCTTTCTGGCGCTCTACGTGCTGTTTCTCTCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS GCA 72 bp | TGCGCGGTCCATATCTTCACATCACAGCCGTACTCCTaGAGCGCCAGCGCCGCGTCCAGCACTAGGCGCTCG | + |
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Preference number: 6 (lower is better) Translates to: CAVHIFTSQPYS*SASAASSTRRS Trigger: CGAGCGCCTAGTGCTGGACGCGGCGCTGGCGCTGCAGGAGTACGGCTGTGATGTGAAGATATGGACCGCGCA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS TCA 72 bp | CCCCTGCGCATTGCACCGAGAGCTCGCGGGTCTCGATaGAGCAGTGGTTCGGGTCGTAGTGCGCGGTCCATA | + |
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Preference number: 6 (lower is better) Translates to: PLRIAPRARGSR*SSGSGRSARSI Trigger: TATGGACCGCGCACTACGACCCGAACCACTGCTTCATCGAGACCCGCGAGCTCTCGGTGCAATGCGCAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS TCA 72 bp | AGAAGTGCACTGGGTCTGGCTCACACAGGAACCCCGTaGCCTTGTGGACAATGGACTCCAGGGGCCCACCGT | + |
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Preference number: 6 (lower is better) Translates to: RSALGLAHTGTP*PCGQWTPGAHR Trigger: ACGGTGGGCCCCTGGAGTCCATTGTCCACAAGGTCACGGGGTTCCTGTGTGAGCCAGACCCAGTGCACTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS GCA 72 bp | ACATGGCCTCCAGAGGGACGATGCCAAAGTGCTCGTTaGTCGGAGTGTAGAGCACACACAAGCAGCCGTGGA | + |
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Preference number: 6 (lower is better) Translates to: TWPPEGRCQSAR*SECRAHTSSRG Trigger: TCCACGGCTGCTTGTGTGTGCTCTACACTCCGAGCAACGAGCACTTTGGCATCGTCCCTCTGGAGGCCATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS GCA 72 bp | CTGGGCACTGCATGTACATGGCCTCCAGAGGGACGATaGCAAAGTGCTCGTTGCTCGGAGTGTAGAGCACAC | + |
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Preference number: 6 (lower is better) Translates to: LGTACTWPPEGR*QSARCSECRAH Trigger: GTGTGCTCTACACTCCGAGCAACGAGCACTTTGGCATCGTCCCTCTGGAGGCCATGTACATGCAGTGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS CCA 72 bp | GGACTCCAGGGGCCCACCGTTATTAACAGCGATGACTaGGCACTGCATGTACATGGCCTCCAGAGGGACGAT | + |
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Preference number: 6 (lower is better) Translates to: GLQGPTVINSDD*ALHVHGLQRDD Trigger: ATCGTCCCTCTGGAGGCCATGTACATGCAGTGCCCAGTCATCGCTGTTAATAACGGTGGGCCCCTGGAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS CAA 72 bp | TGCACTGGGTCTGGCTCACACAGGAACCCCGTGACCTaGTGGACAATGGACTCCAGGGGCCCACCGTTATTA | + |
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Preference number: 6 (lower is better) Translates to: CTGSGSHRNPVT*WTMDSRGPPLL Trigger: TAATAACGGTGGGCCCCTGGAGTCCATTGTCCACAAGGTCACGGGGTTCCTGTGTGAGCCAGACCCAGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS CAA 90 bp | TCTGAGAAGTGCACTGGGTCTGGCTCACACAGGAACCCCGTGACCTaGTGGACAATGGACTCCAGGGGCCCACCGTTATTAACAGCGATG | + |
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Preference number: 6 (lower is better) Translates to: SEKCTGSGSHRNPVT*WTMDSRGPPLLTAM Trigger: CATCGCTGTTAATAACGGTGGGCCCCTGGAGTCCATTGTCCACAAGGTCACGGGGTTCCTGTGTGAGCCAGACCCAGTGCACTTCTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS TCA 72 bp | CGGAGTGTAGAGCACACACAAGCAGCCGTGGAGGAGTaGGATCTTCTGTCTGTCCGAGAAGGACCGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: RSVEHTQAAVEE*DLLSVREGPQE Trigger: TTCCTGCGGTCCTTCTCGGACAGACAGAAGATCTCACTCCTCCACGGCTGCTTGTGTGTGCTCTACACTCCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS GCA 72 bp | AGGGGCCCACCGTTATTAACAGCGATGACTGGGCACTaGATGTACATGGCCTCCAGAGGGACGATGCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: RGPPLLTAMTGH*MYMASRGTMPK Trigger: CTTTGGCATCGTCCCTCTGGAGGCCATGTACATGCAGTGCCCAGTCATCGCTGTTAATAACGGTGGGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS CCA 72 bp | GCCTATACCCATGTCTGGGTGCAGAAACAGCACAGATaGGCTGTAAACCCGGGAACGGGCTCGGTACAGGTT | + |
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Preference number: 6 (lower is better) Translates to: AYTHVWVQKQHR*AVNPGTGSVQV Trigger: AACCTGTACCGAGCCCGTTCCCGGGTTTACAGCCCATCTGTGCTGTTTCTGCACCCAGACATGGGTATAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS CCA 72 bp | ACTGGGTCTGGCTCACACAGGAACCCCGTGACCTTGTaGACAATGGACTCCAGGGGCCCACCGTTATTAACA | + |
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Preference number: 6 (lower is better) Translates to: TGSGSHRNPVTL*TMDSRGPPLLT Trigger: TGTTAATAACGGTGGGCCCCTGGAGTCCATTGTCCACAAGGTCACGGGGTTCCTGTGTGAGCCAGACCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS GCA 72 bp | GGTTTGTGGATGAACTTCTCCATGGCTTCTGAGAAGTaGACTGGGTCTGGCTCACACAGGAACCCCGTGACC | + |
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Preference number: 6 (lower is better) Translates to: GLWMNFSMASEK*TGSGSHRNPVT Trigger: GGTCACGGGGTTCCTGTGTGAGCCAGACCCAGTGCACTTCTCAGAAGCCATGGAGAAGTTCATCCACAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS TCA 72 bp | AGTAAAATAGGACCCTCTTACGCCGTCTGGCCAGTTTaGACACCGGGATACAGGCAGACACCTGGTCGCACA | + |
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Preference number: 6 (lower is better) Translates to: SKIGPSYAVWPV*TPGYRQTPGRT Trigger: TGTGCGACCAGGTGTCTGCCTGTATCCCGGTGTTCAAACTGGCCAGACGGCGTAAGAGGGTCCTATTTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS GCA 72 bp | GGAAGCAGTGTACTGGCTGTTGACCAAGATGCGGTCTaGCATGCCTGTGGTGTATTCCTCGATCCAGTCGAT | + |
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Preference number: 6 (lower is better) Translates to: GSSVLAVDQDAV*HACGVFLDPVD Trigger: ATCGACTGGATCGAGGAATACACCACAGGCATGGCAGACCGCATCTTGGTCAACAGCCAGTACACTGCTTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044148.3 ENSMUST00000143104.2 |
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| CDS TCA 72 bp | CCAGTCGATGGGGGCCCTGTAGAACTTCTTCAGAGCTaGATTTCTCTGAGTAAGCAGCAGATCTGGTCGCAC | + |
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Preference number: 6 (lower is better) Translates to: PVDGGPVELLQS*ISLSKQQIWSH Trigger: GTGCGACCAGATCTGCTGCTTACTCAGAGAAATTCAGCTCTGAAGAAGTTCTACAGGGCCCCCATCGACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143104.2 |
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| CDS CCA 72 bp | CTGCCATGCCTGTGGTGTATTCCTCGATCCAGTCGATaGGGGCCCTGTAGAACTTCTTCAGAGCTGAATTTC | + |
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Preference number: 6 (lower is better) Translates to: LPCLWCIPRSSR*GPCRTSSELNF Trigger: GAAATTCAGCTCTGAAGAAGTTCTACAGGGCCCCCATCGACTGGATCGAGGAATACACCACAGGCATGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044148.3 ENSMUST00000143104.2 |
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| CDS TCA 72 bp | CCAGTCGATGGGGGCCCTGTAGAACTTCTTCAGAGCTaGATTTCTCTGAGTAAGCAGCAGATCTGGGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: PVDGGPVELLQS*ISLSKQQIWEV Trigger: CACTTCCCAGATCTGCTGCTTACTCAGAGAAATTCAGCTCTGAAGAAGTTCTACAGGGCCCCCATCGACTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS TCA 72 bp | TTCTGTCTGTCCGAGAAGGACCGCAGGAAGGTCACATaGCGCTCAAGGTCTGACTCTTGGACCATTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FCLSEKDRRKVT*RSRSDSWTIFF Trigger: GAAGAAAATGGTCCAAGAGTCAGACCTTGAGCGTCATGTGACCTTCCTGCGGTCCTTCTCGGACAGACAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS TCA 72 bp | CGAGGCCCATCGTGGCTTTTAAGGATGGTTTGTGGATaGACTTCTCCATGGCTTCTGAGAAGTGCACTGGGT | + |
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Preference number: 6 (lower is better) Translates to: RGPSWLLRMVCG*TSPWLLRSALG Trigger: ACCCAGTGCACTTCTCAGAAGCCATGGAGAAGTTCATCCACAAACCATCCTTAAAAGCCACGATGGGCCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS CCA 72 bp | CCAGCGAGGCCCATCGTGGCTTTTAAGGATGGTTTGTaGATGAACTTCTCCATGGCTTCTGAGAAGTGCACT | + |
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Preference number: 6 (lower is better) Translates to: PARPIVAFKDGL*MNFSMASEKCT Trigger: AGTGCACTTCTCAGAAGCCATGGAGAAGTTCATCCACAAACCATCCTTAAAAGCCACGATGGGCCTCGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044148.3 |
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| CDS CAA 90 bp | AGGGTCTTGAAGGTTTCTTTAAAGACGGAAGCAGTGTACTGGCTGTaGACCAAGATGCGGTCTGCCATGCCTGTGGTGTATTCCTCGATC | + |
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Preference number: 6 (lower is better) Translates to: RVLKVSLKTEAVYWL*TKMRSAMPVVYSSI Trigger: GATCGAGGAATACACCACAGGCATGGCAGACCGCATCTTGGTCAACAGCCAGTACACTGCTTCCGTCTTTAAAGAAACCTTCAAGACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044148.3 ENSMUST00000143104.2 |
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| CDS TCA 72 bp | CGTTCTCCGGGATCCTATCGTCATAACCACCGGCCATaGAGAGATGAACCTTATCCCACTCTTGAGATGGTA | + |
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Preference number: 6 (lower is better) Translates to: RSPGSYRHNHRP*RDEPYPTLEMV Trigger: TACCATCTCAAGAGTGGGATAAGGTTCATCTCTTCATGGCCGGTGGTTATGACGATAGGATCCCGGAGAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044148.3 ENSMUST00000143104.2 |
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| CDS CCA 72 bp | GTCTTGAAGGTTTCTTTAAAGACGGAAGCAGTGTACTaGCTGTTGACCAAGATGCGGTCTGCCATGCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: VLKVSLKTEAVY*LLTKMRSAMPV Trigger: CACAGGCATGGCAGACCGCATCTTGGTCAACAGCCAGTACACTGCTTCCGTCTTTAAAGAAACCTTCAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044148.3 ENSMUST00000143104.2 |
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| CDS TCA 72 bp | GAAGGACCGCAGGAAGGTCACATGACGCTCAAGGTCTaGCTCTTGGACCATTTTCTTCAACTCCTTATAGTG | + |
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Preference number: 6 (lower is better) Translates to: EGPQEGHMTLKV*LLDHFLQLLIV Trigger: CACTATAAGGAGTTGAAGAAAATGGTCCAAGAGTCAGACCTTGAGCGTCATGTGACCTTCCTGCGGTCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044148.3 ENSMUST00000143104.2 |
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| CDS CAA 72 bp | AAGGTTTCTTTAAAGACGGAAGCAGTGTACTGGCTGTaGACCAAGATGCGGTCTGCCATGCCTGTGGTGTAT | + |
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Preference number: 6 (lower is better) Translates to: KVSLKTEAVYWL*TKMRSAMPVVY Trigger: ATACACCACAGGCATGGCAGACCGCATCTTGGTCAACAGCCAGTACACTGCTTCCGTCTTTAAAGAAACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044148.3 ENSMUST00000143104.2 |
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| CDS CAA 72 bp | AGTGCCAAGGGCAGATTTTTCTTCCTTTCGTATCGGTaGATAGAGAGGAACAGGAATTGCTTCCCCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SAKGRFFFLSYR*IERNRNCFPLG Trigger: CCCCAAGGGGAAGCAATTCCTGTTCCTCTCTATCAACCGATACGAAAGGAAGAAAAATCTGCCCTTGGCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044148.3 ENSMUST00000143104.2 |
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