Pregenerated sensors for ALG13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041718Ensembl transcript IDs: ENSMUST00000070801.11, ENSMUST00000123710.8, ENSMUST00000145724.7, ENSMUST00000149330.8, ENSMUST00000154827.8, ENSMUST00000197316.5, ENSMUST00000198039.5, ENSMUST00000238864.2
Found 270 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | ATAGGAATAAGGCGGCGGCGGCGGCGGCGGTGGTGGTGGTGGTGGTaGAAGAGGAAACCCCGAAGCATCTCCTGCTTCAAGAGTAGCAGG | + |
Preference number: 1 (lower is better) Translates to: IGIRRRRRRRWWWWW*KRKPRSISCFKSSR Trigger: CCTGCTACTCTTGAAGCAGGAGATGCTTCGGGGTTTCCTCTTCCACCACCACCACCACCACCGCCGCCGCCGCCGCCGCCTTATTCCTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000198039.5 |
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3UTR TCA 90 bp | GTTGCTGCAGAATCTTGGCACTTCCCAGAAGCACAAGCAAGAGGCTaGCTGGCGCAGGACAAGACAGGACCCTGCAGGTACAATAAAAGA | + |
Preference number: 1 (lower is better) Translates to: VAAESWHFPEAQARG*LAQDKTGPCRYNKR Trigger: TCTTTTATTGTACCTGCAGGGTCCTGTCTTGTCCTGCGCCAGTCAGCCTCTTGCTTGTGCTTCTGGGAAGTGCCAAGATTCTGCAGCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145724.7 |
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3UTR CCA 90 bp | CTGCAGAATCTTGGCACTTCCCAGAAGCACAAGCAAGAGGCTGACTaGCGCAGGACAAGACAGGACCCTGCAGGTACAATAAAAGAGATG | + |
Preference number: 1 (lower is better) Translates to: LQNLGTSQKHKQEAD*RRTRQDPAGTIKEM Trigger: CATCTCTTTTATTGTACCTGCAGGGTCCTGTCTTGTCCTGCGCCAGTCAGCCTCTTGCTTGTGCTTCTGGGAAGTGCCAAGATTCTGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145724.7 |
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3UTR CCA 90 bp | GGAAAACACAGAATGCAGGTAAGAATAGGCAGTGGCCACAAGTACTaGAGCTTGTGTAGGCAGGTATCCGAAGCAGCTCAAGGTCTAGGC | + |
Preference number: 1 (lower is better) Translates to: GKHRMQVRIGSGHKY*SLCRQVSEAAQGLG Trigger: GCCTAGACCTTGAGCTGCTTCGGATACCTGCCTACACAAGCTCCAGTACTTGTGGCCACTGCCTATTCTTACCTGCATTCTGTGTTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145724.7 |
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3UTR TCA 90 bp | TGCAGCACTGGAACAGGCGGCAGCCTCTTCAGTTCTATCTTCGGTTaGACTCTTCTGATCACTACTGCCTTCTACACTTGCAGTCAAAGC | + |
Preference number: 1 (lower is better) Translates to: CSTGTGGSLFSSIFG*TLLITTAFYTCSQS Trigger: GCTTTGACTGCAAGTGTAGAAGGCAGTAGTGATCAGAAGAGTTCAACCGAAGATAGAACTGAAGAGGCTGCCGCCTGTTCCAGTGCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR GCA 90 bp | TTGACGGACTTTCTGGAACCTTTTGTCTTTCTGTCCCTTGCTTATTaGCTTCTGGTGTACTTGCAGCACTGGAACAGGCGGCAGCCTCTT | + |
Preference number: 1 (lower is better) Translates to: LTDFLEPFVFLSLAY*LLVYLQHWNRRQPL Trigger: AAGAGGCTGCCGCCTGTTCCAGTGCTGCAAGTACACCAGAAGGCAATAAGCAAGGGACAGAAAGACAAAAGGTTCCAGAAAGTCCGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR GCA 90 bp | AGCATCTTTGACGGACTTTCTGGAACCTTTTGTCTTTCTGTCCCTTaGTTATTGCCTTCTGGTGTACTTGCAGCACTGGAACAGGCGGCA | + |
Preference number: 1 (lower is better) Translates to: SIFDGLSGTFCLSVP*LLPSGVLAALEQAA Trigger: TGCCGCCTGTTCCAGTGCTGCAAGTACACCAGAAGGCAATAAGCAAGGGACAGAAAGACAAAAGGTTCCAGAAAGTCCGTCAAAGATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR GCA 90 bp | CAGCTGTCTGTGAGTAGTATAGTAGAGGGTCATGACCATAATGCATaGTGTGCTGAATCCTGGATGGAACAAGGGGATCTCCCCTGCTAT | + |
Preference number: 1 (lower is better) Translates to: QLSVSSIVEGHDHNA*CAESWMEQGDLPCY Trigger: ATAGCAGGGGAGATCCCCTTGTTCCATCCAGGATTCAGCACAGCATGCATTATGGTCATGACCCTCTACTATACTACTCACAGACAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR CCA 90 bp | CACCTGAGGAGCACTTTGGTCTACGAGGGGTTGCTCAGTACAATCTaGATAACTCTCTCCATGAACCTGTTCTTGTTGTTGCTGCTGTTG | + |
Preference number: 1 (lower is better) Translates to: HLRSTLVYEGLLSTI*ITLSMNLFLLLLLL Trigger: CAACAGCAGCAACAACAAGAACAGGTTCATGGAGAGAGTTATCCAGATTGTACTGAGCAACCCCTCGTAGACCAAAGTGCTCCTCAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR GCA 90 bp | GGCAAGAGGCATCCTTGGCAACCACCTTTCGAAACAGCCCTAAACTaGCTAAATATTCATCCATTGATGCCTCATTCAAAGACTTCTGGC | + |
Preference number: 1 (lower is better) Translates to: GKRHPWQPPFETALN*LNIHPLMPHSKTSG Trigger: GCCAGAAGTCTTTGAATGAGGCATCAATGGATGAATATTTAGGCAGTTTAGGGCTGTTTCGAAAGGTGGTTGCCAAGGATGCCTCTTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000145724.7 ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR GCA 90 bp | CAACAAAGGAGACCCATAGGGATCTGTCATTACTGGATAGTAGACTaGTCCATGAGGGAGAGGTACAGCATCAGCAATGGGAAAAGTATC | + |
Preference number: 1 (lower is better) Translates to: QQRRPIGICHYWIVD*SMRERYSISNGKSI Trigger: GATACTTTTCCCATTGCTGATGCTGTACCTCTCCCTCATGGAGCAGTCTACTATCCAGTAATGACAGATCCCTATGGGTCTCCTTTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR CCA 90 bp | GCATTCCAGGAAGGAAGAAGTGCCACTTGGTTGACTGGTCTTACATaGGCCAGCGGAATTGAATGCCTTTCTGCAAATTCCTCAATGAAA | + |
Preference number: 1 (lower is better) Translates to: AFQEGRSATWLTGLT*ASGIECLSANSSMK Trigger: TTTCATTGAGGAATTTGCAGAAAGGCATTCAATTCCGCTGGCCCATGTAAGACCAGTCAACCAAGTGGCACTTCTTCCTTCCTGGAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR CCA 90 bp | GGAATCAAATCCCAACAAAGGAGACCCATAGGGATCTGTCATTACTaGATAGTAGACTGCTCCATGAGGGAGAGGTACAGCATCAGCAAT | + |
Preference number: 1 (lower is better) Translates to: GIKSQQRRPIGICHY*IVDCSMRERYSISN Trigger: ATTGCTGATGCTGTACCTCTCCCTCATGGAGCAGTCTACTATCCAGTAATGACAGATCCCTATGGGTCTCCTTTGTTGGGATTTGATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR TCA 90 bp | ACCTTGTGCAGGTGGAGGTACAAAGCCAGGTTGTATGGCATTCTGTaGAGAAATATCAGAGGTACGAAGAGCTTCATTATCTCCTGCACA | + |
Preference number: 1 (lower is better) Translates to: TLCRWRYKARLYGIL*RNIRGTKSFIISCT Trigger: TGTGCAGGAGATAATGAAGCTCTTCGTACCTCTGATATTTCTTCACAGAATGCCATACAACCTGGCTTTGTACCTCCACCTGCACAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR TCA 90 bp | ATGAGGGAGAGGTACAGCATCAGCAATGGGAAAAGTATCATTTGTTaGTACATCTGCCTGTGTGCCATCCTCTCTCACCACATCACTGTA | + |
Preference number: 1 (lower is better) Translates to: MRERYSISNGKSIIC*YICLCAILSHHITV Trigger: TACAGTGATGTGGTGAGAGAGGATGGCACACAGGCAGATGTATCAACAAATGATACTTTTCCCATTGCTGATGCTGTACCTCTCCCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR GCA 90 bp | GTCTTGAGGCACAGAAGATGGTCCACTGTCCTGAAGAGACAGGTTTaGTGTAGATACAGTTGTGGTATACACACTAGAAGTTTCATAGCC | + |
Preference number: 1 (lower is better) Translates to: VLRHRRWSTVLKRQV*CRYSCGIHTRSFIA Trigger: GGCTATGAAACTTCTAGTGTGTATACCACAACTGTATCTACAGCAAACCTGTCTCTTCAGGACAGTGGACCATCTTCTGTGCCTCAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR GCA 90 bp | AATGCATGCTGTGCTGAATCCTGGATGGAACAAGGGGATCTCCCCTaGTATAAGCCATGGTCATATAAATCTCTTTCCCTCGAAATTTCT | + |
Preference number: 1 (lower is better) Translates to: NACCAESWMEQGDLP*YKPWSYKSLSLEIS Trigger: AGAAATTTCGAGGGAAAGAGATTTATATGACCATGGCTTATAGCAGGGGAGATCCCCTTGTTCCATCCAGGATTCAGCACAGCATGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR CCA 90 bp | CCCAGCCCTTGTCTATTTTACAGGAACAAATATTACCAGGAATGGTaGCATGTGCCTGTAATCCCAGGACTTGAAGGATCACAAGTTCAA | + |
Preference number: 1 (lower is better) Translates to: PSPCLFYRNKYYQEW*HVPVIPGLEGSQVQ Trigger: TTGAACTTGTGATCCTTCAAGTCCTGGGATTACAGGCACATGCCACCATTCCTGGTAATATTTGTTCCTGTAAAATAGACAAGGGCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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3UTR TCA 90 bp | ACATGCTGCATTAACTGGATGCCACATAGCAATACTGGAATAATCTaGTGCAACAGGAACATAGGAATCAAATCCCAACAAAGGAGACCC | + |
Preference number: 1 (lower is better) Translates to: TCCINWMPHSNTGII*CNRNIGIKSQQRRP Trigger: GGGTCTCCTTTGTTGGGATTTGATTCCTATGTTCCTGTTGCATCAGATTATTCCAGTATTGCTATGTGGCATCCAGTTAATGCAGCATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR TCA 90 bp | CCATGGGATGCCAGTAGTTGTGATGATAGCACTGCAATCCCAGATTaGAATAGTACTGTAAAACTTTTGTATCTGGACTACCTTGTGCAG | + |
Preference number: 1 (lower is better) Translates to: PWDASSCDDSTAIPD*NSTVKLLYLDYLVQ Trigger: CTGCACAAGGTAGTCCAGATACAAAAGTTTTACAGTACTATTTCAATCTGGGATTGCAGTGCTATCATCACAACTACTGGCATCCCATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197316.5 |
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3UTR CCA 90 bp | AAACTGCCTAAATATTCATCCATTGATGCCTCATTCAAAGACTTCTaGCCGCAGTACTTTTTCCATCCTTTTTGCATTGTGCATGGGATG | + |
Preference number: 1 (lower is better) Translates to: KLPKYSSIDASFKDF*PQYFFHPFCIVHGM Trigger: CATCCCATGCACAATGCAAAAAGGATGGAAAAAGTACTGCGGCCAGAAGTCTTTGAATGAGGCATCAATGGATGAATATTTAGGCAGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000145724.7 ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR CCA 90 bp | CATATCTGTCATAACTATTTCAGGGAAATAGCCTCCAGTTATAGTTaGATAACCTCTTCCATTACGAATTGGTATGGCATTCCAGGAAGG | + |
Preference number: 1 (lower is better) Translates to: HICHNYFREIASSYS*ITSSITNWYGIPGR Trigger: CCTTCCTGGAATGCCATACCAATTCGTAATGGAAGAGGTTATCCAACTATAACTGGAGGCTATTTCCCTGAAATAGTTATGACAGATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR TCA 90 bp | CTTTTTACCTTGCTTGGTAACAGGTATTTTTACCATTCACTGTTGTaGATACTAGGCTGCTTAGTCCAATGTCTTCCAGGGAATTCTATC | + |
Preference number: 1 (lower is better) Translates to: LFTLLGNRYFYHSLL*ILGCLVQCLPGNSI Trigger: GATAGAATTCCCTGGAAGACATTGGACTAAGCAGCCTAGTATTCACAACAGTGAATGGTAAAAATACCTGTTACCAAGCAAGGTAAAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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3UTR CCA 90 bp | TTCTGGAACCTTGTCTTCAAAGCCATTATCTGTGACTTGAGTTGGTaGCTTTCCAGGATAACGATAAATAATGAAATCTCGATTATAAAT | + |
Preference number: 1 (lower is better) Translates to: FWNLVFKAIICDLSW*LSRITINNEISIIN Trigger: ATTTATAATCGAGATTTCATTATTTATCGTTATCCTGGAAAGCCACCAACTCAAGTCACAGATAATGGCTTTGAAGACAAGGTTCCAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198039.5 |
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3UTR-3UTR GCA 90 bp | CTGCGCAGAAGCACCACATGCTGCATTAACTGGATGCCACATAGCAATACTGGAGCCTTCTGGTGTACTTaGAGCACTGGAACAGGCGGC | + |
Preference number: 2 (lower is better) Translates to: LRRSTTCCINWMPHSNTGAFWCT*STGTGG Trigger: GCCGCCTGTTCCAGTGCTGCAAGTACACCAGAAGGC...TCCAGTATTGCTATGTGGCATCCAGTTAATGCAGCATGTGGTGCTTCTGCGCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR-3UTR CCA 90 bp | CTCTCACCACATCACTGTACACCTGAGGAGCACTTTGGTCTACGAGGGGTTGCTGCTTTTAGTTCCAGCTaGCCAGCACTCTCCTTGGGA | + |
Preference number: 2 (lower is better) Translates to: LSPHHCTPEEHFGLRGVAAFSSS*PALSLG Trigger: TCCCAAGGAGAGTGCTGGCCAGCTGGAACTAAAAGC...AGCAACCCCTCGTAGACCAAAGTGCTCCTCAGGTGTACAGTGATGTGGTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR-3UTR TCA 90 bp | CTCTCACCACATCACTGTACACCTGAGGAGCACTTTGGTCTACGAGGGGTTGCTGATGGTCCACTGTCCTaGAGAGACAGGTTTGCTGTA | + |
Preference number: 2 (lower is better) Translates to: LSPHHCTPEEHFGLRGVADGPLS*RDRFAV Trigger: TACAGCAAACCTGTCTCTTCAGGACAGTGGACCATC...AGCAACCCCTCGTAGACCAAAGTGCTCCTCAGGTGTACAGTGATGTGGTGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR TCA 90 bp | ATAGGGATCTGTCATTACTGGATAGTAGACTGCTCCATGAGGGAGAGGTACAGCTGCTGCTCCTGCTGCTaGAGGCTCAAGATAGGCTGG | + |
Preference number: 2 (lower is better) Translates to: IGICHYWIVDCSMRERYSCCSCC*RLKIGW Trigger: CCAGCCTATCTTGAGCCTTCAGCAGCAGGAGCAGCA...GCTGTACCTCTCCCTCATGGAGCAGTCTACTATCCAGTAATGACAGATCCCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000198039.5 |
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3UTR-3UTR GCA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACTGTTGCGGCGGCGGCTaGTGCTGTTGCGGCTGCTGT | + |
Preference number: 2 (lower is better) Translates to: ANAKQNTMCLQNWLISGYCCGGG*CCCGCC Trigger: ACAGCAGCCGCAACAGCAGCAGCCGCCGCCGCAACA...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR CCA 90 bp | AGAAGATGGTCCACTGTCCTGAAGAGACAGGTTTGCTGTAGATACAGTTGTGGTGGCCAGCACTCTCCTTaGGATCTCCCAACCGTTCCA | + |
Preference number: 2 (lower is better) Translates to: RRWSTVLKRQVCCRYSCGGQHSP*DLPTVP Trigger: TGGAACGGTTGGGAGATCCCAAGGAGAGTGCTGGCC...ACCACAACTGTATCTACAGCAAACCTGTCTCTTCAGGACAGTGGACCATCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR CAA 90 bp | TTTGACGGACTTTCTGGAACCTTTTGTCTTTCTGTCCCTTGCTTATaGCCTTCTGGTGTACTTGCAGCACTGGAACAGGCGGCAGCCTCT | + |
Preference number: 2 (lower is better) Translates to: FDGLSGTFCLSVPCL*PSGVLAALEQAAAS Trigger: AGAGGCTGCCGCCTGTTCCAGTGCTGCAAGTACACCAGAAGGCAATAAGCAAGGGACAGAAAGACAAAAGGTTCCAGAAAGTCCGTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR-3UTR GCA 90 bp | AAGGAGACCCATAGGGATCTGTCATTACTGGATAGTAGACTGCTCCATGAGGGATCTGGCAGCACTTTCTaGCTGAGCCAGAGCAAAACC | + |
Preference number: 2 (lower is better) Translates to: KETHRDLSLLDSRLLHEGSGSTF*LSQSKT Trigger: GGTTTTGCTCTGGCTCAGGCAGAAAGTGCTGCCAGA...TCCCTCATGGAGCAGTCTACTATCCAGTAATGACAGATCCCTATGGGTCTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR CCA 90 bp | TTTTGTATCTTGGGGCAGATCACTTCCACTCGGATCATAGGAATAAGGCGGCGGACTACCTTGTGCAGGTaGAGGTACAAAGCCAGGTTG | + |
Preference number: 2 (lower is better) Translates to: FCILGQITSTRIIGIRRRTTLCR*RYKARL Trigger: CAACCTGGCTTTGTACCTCCACCTGCACAAGGTAGT...CCGCCGCCTTATTCCTATGATCCGAGTGGAAGTGATCTGCCCCAAGATACAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000198039.5 |
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3UTR-3UTR TCA 90 bp | AAGGAGACCCATAGGGATCTGTCATTACTGGATAGTAGACTGCTCCATGAGGGACAAAGGTGGTTTGCATaGGTTATAGCCCTGCCTTGC | + |
Preference number: 2 (lower is better) Translates to: KETHRDLSLLDSRLLHEGQRWFA*VIALPC Trigger: GCAAGGCAGGGCTATAACTCATGCAAACCACCTTTG...TCCCTCATGGAGCAGTCTACTATCCAGTAATGACAGATCCCTATGGGTCTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR CCA 90 bp | CTGCGCAGAAGCACCACATGCTGCATTAACTGGATGCCACATAGCAATACTGGAACAGTTCGGTATGACTaGAACTGGAACATGGCTTGC | + |
Preference number: 2 (lower is better) Translates to: LRRSTTCCINWMPHSNTGTVRYD*NWNMAC Trigger: GCAAGCCATGTTCCAGTTCCAGTCATACCGAACTGT...TCCAGTATTGCTATGTGGCATCCAGTTAATGCAGCATGTGGTGCTTCTGCGCAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR CAA 90 bp | CTCCATGAGGGAGAGGTACAGCATCAGCAATGGGAAAAGTATCATTaGTTGATACATCTGCCTGTGTGCCATCCTCTCTCACCACATCAC | + |
Preference number: 2 (lower is better) Translates to: LHEGEVQHQQWEKYH*LIHLPVCHPLSPHH Trigger: GTGATGTGGTGAGAGAGGATGGCACACAGGCAGATGTATCAACAAATGATACTTTTCCCATTGCTGATGCTGTACCTCTCCCTCATGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR CCA 90 bp | GCATTCCAGGAAGGAAGAAGTGCCACTTGGTTGACTGGTCTTACATGGGCCAGCATTTCGATAGATTTCTaGATCCAGAGCTTTCAGCAC | + |
Preference number: 2 (lower is better) Translates to: AFQEGRSATWLTGLTWASISIDF*IQSFQH Trigger: GTGCTGAAAGCTCTGGATCCAGAAATCTATCGAAAT...GCTGGCCCATGTAAGACCAGTCAACCAAGTGGCACTTCTTCCTTCCTGGAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR CCA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACAGTGAGACGAATCCCTaGGCATCCCATATCCCCGAC | + |
Preference number: 2 (lower is better) Translates to: ANAKQNTMCLQNWLISGYSETNP*ASHIPD Trigger: GTCGGGGATATGGGATGCCCAGGGATTCGTCTCACT...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR TCA 90 bp | AAGGAGACCCATAGGGATCTGTCATTACTGGATAGTAGACTGCTCCATGAGGGACAAAGCCATTATCTGTaGCTTGAGTTGGTGGCTTTC | + |
Preference number: 2 (lower is better) Translates to: KETHRDLSLLDSRLLHEGQSHYL*LELVAF Trigger: GAAAGCCACCAACTCAAGTCACAGATAATGGCTTTG...TCCCTCATGGAGCAGTCTACTATCCAGTAATGACAGATCCCTATGGGTCTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR TCA 90 bp | CTACCTTGTGCAGGTGGAGGTACAAAGCCAGGTTGTATGGCATTCTGTGAAGAATCGGTTGAACTCTTCTaGTCACTACTGCCTTCTACA | + |
Preference number: 2 (lower is better) Translates to: LPCAGGGTKPGCMAFCEESVELF*SLLPST Trigger: TGTAGAAGGCAGTAGTGATCAGAAGAGTTCAACCGA...TTCTTCACAGAATGCCATACAACCTGGCTTTGTACCTCCACCTGCACAAGGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR-3UTR TCA 90 bp | ATAGGGATCTGTCATTACTGGATAGTAGACTGCTCCATGAGGGAGAGGTACAGCAGACACAAGCTCTCCTaGTCTGTAAATGATGGATCT | + |
Preference number: 2 (lower is better) Translates to: IGICHYWIVDCSMRERYSRHKLS*SVNDGS Trigger: AGATCCATCATTTACAGATCAGGAGAGCTTGTGTCT...GCTGTACCTCTCCCTCATGGAGCAGTCTACTATCCAGTAATGACAGATCCCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR-3UTR TCA 90 bp | GCATCAGCAATGGGAAAAGTATCATTTGTTGATACATCTGCCTGTGTGCCATCCCCATTATCTGTGACTTaGGTTGGTGGCTTTCCAGGA | + |
Preference number: 2 (lower is better) Translates to: ASAMGKVSFVDTSACVPSPLSVT*VGGFPG Trigger: TCCTGGAAAGCCACCAACTCAAGTCACAGATAATGG...GGATGGCACACAGGCAGATGTATCAACAAATGATACTTTTCCCATTGCTGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR TCA 90 bp | TGTGCCATCCTCTCTCACCACATCACTGTACACCTGAGGAGCACTTTGGTCTACACCTTGTCTTTGAGATaGATGTTGAGGGTAAAAATG | + |
Preference number: 2 (lower is better) Translates to: CAILSHHITVHLRSTLVYTLSLR*MLRVKM Trigger: CATTTTTACCCTCAACATTCATCTCAAAGACAAGGT...GTAGACCAAAGTGCTCCTCAGGTGTACAGTGATGTGGTGAGAGAGGATGGCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR TCA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACGATGGTCCACTGTCCTaGAGAGACAGGTTTGCTGTA | + |
Preference number: 2 (lower is better) Translates to: ANAKQNTMCLQNWLISGYDGPLS*RDRFAV Trigger: TACAGCAAACCTGTCTCTTCAGGACAGTGGACCATC...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
||
3UTR-3UTR GCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGTGTTGCTGCTGTTGTTaGGGCGGCGGCTGCTGCTGT | + |
Preference number: 2 (lower is better) Translates to: NWLISGYNSVLTTLKRNLCCCCC*GGGCCC Trigger: ACAGCAGCAGCCGCCGCCGCAACAACAGCAGCAACA...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
||
3UTR-3UTR CCA 90 bp | CCAGATATTTCTCAAAAGATCCCTCCACATAAGACTCAAAAGCTTGTTGGTTTTGGCCAGCACTCTCCTTaGGATCTCCCAACCGTTCCA | + |
Preference number: 2 (lower is better) Translates to: PDISQKIPPHKTQKLVGFGQHSP*DLPTVP Trigger: TGGAACGGTTGGGAGATCCCAAGGAGAGTGCTGGCC...AAAACCAACAAGCTTTTGAGTCTTATGTGGAGGGATCTTTTGAGAAATATCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
||
3UTR-3UTR TCA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACGGGAAACAGCATCTTTaGCGGACTTTCTGGAACCTT | + |
Preference number: 2 (lower is better) Translates to: ANAKQNTMCLQNWLISGYGKQHL*RTFWNL Trigger: AAGGTTCCAGAAAGTCCGTCAAAGATGCTGTTTCCC...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
||
3UTR-3UTR TCA 90 bp | GAAAAGTATCATTTGTTGATACATCTGCCTGTGTGCCATCCTCTCTCACCACATATGGGCCAGCGGAATTaGATGCCTTTCTGCAAATTC | + |
Preference number: 2 (lower is better) Translates to: EKYHLLIHLPVCHPLSPHMGQRN*MPFCKF Trigger: GAATTTGCAGAAAGGCATTCAATTCCGCTGGCCCAT...ATGTGGTGAGAGAGGATGGCACACAGGCAGATGTATCAACAAATGATACTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR TCA 90 bp | GAAAAGTATCATTTGTTGATACATCTGCCTGTGTGCCATCCTCTCTCACCACATTGCAACACAGTAGCCTaGAGTAGCAGGAACCATTGT | + |
Preference number: 2 (lower is better) Translates to: EKYHLLIHLPVCHPLSPHCNTVA*SSRNHC Trigger: ACAATGGTTCCTGCTACTTCAGGCTACTGTGTTGCA...ATGTGGTGAGAGAGGATGGCACACAGGCAGATGTATCAACAAATGATACTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
||
3UTR-3UTR GCA 90 bp | CAAGGGGATCTCCCCTGCTATAAGCCATGGTCATATAAATCTCTTTCCCTCGAAACTGCCTTCTACACTTaGAGTCAAAGCATGGTGTTT | + |
Preference number: 2 (lower is better) Translates to: QGDLPCYKPWSYKSLSLETAFYT*SQSMVF Trigger: AAACACCATGCTTTGACTGCAAGTGTAGAAGGCAGT...TTCGAGGGAAAGAGATTTATATGACCATGGCTTATAGCAGGGGAGATCCCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
||
3UTR-3UTR GCA 90 bp | GTATCATTTGTTGATACATCTGCCTGTGTGCCATCCTCTCTCACCACATCACTGAATTCAAAGGTGGTTTaGATGAGTTATAGCCCTGCC | + |
Preference number: 2 (lower is better) Translates to: VSFVDTSACVPSSLTTSLNSKVV*MSYSPA Trigger: GGCAGGGCTATAACTCATGCAAACCACCTTTGAATT...CAGTGATGTGGTGAGAGAGGATGGCACACAGGCAGATGTATCAACAAATGATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR CCA 90 bp | TGCCTAAATATTCATCCATTGATGCCTCATTCAAAGACTTCTGGCCGCAGTACTGTTGCTGCAGAATCTTaGCACTTCCCAGAAGCACAA | + |
Preference number: 2 (lower is better) Translates to: CLNIHPLMPHSKTSGRSTVAAES*HFPEAQ Trigger: TTGTGCTTCTGGGAAGTGCCAAGATTCTGCAGCAAC...AGTACTGCGGCCAGAAGTCTTTGAATGAGGCATCAATGGATGAATATTTAGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145724.7 |
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3UTR-3UTR CCA 90 bp | CAAGGGGATCTCCCCTGCTATAAGCCATGGTCATATAAATCTCTTTCCCTCGAAGCCTCCAGTTATAGTTaGATAACCTCTTCCATTACG | + |
Preference number: 2 (lower is better) Translates to: QGDLPCYKPWSYKSLSLEASSYS*ITSSIT Trigger: CGTAATGGAAGAGGTTATCCAACTATAACTGGAGGC...TTCGAGGGAAAGAGATTTATATGACCATGGCTTATAGCAGGGGAGATCCCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR CAA 90 bp | AAATGTAACAGTTTCTTCCACTCCATTCTCTGGAGCAAAACCATATaGGCATCCCTTATTCATGCAATGCATCTGACGATGGCTACGCCT | + |
Preference number: 2 (lower is better) Translates to: KCNSFFHSILWSKTI*ASLIHAMHLTMATP Trigger: AGGCGTAGCCATCGTCAGATGCATTGCATGAATAAGGGATGCCAATATGGTTTTGCTCCAGAGAATGGAGTGGAAGAAACTGTTACATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR TCA 90 bp | TTGCCCATTAGAGGGACGAGTTGTACATTCATTGCAATTTTCTTATTCATAACAGCAGCACTTTCTGCCTaGGCCAGAGCAAAACCCAAC | + |
Preference number: 2 (lower is better) Translates to: LPIRGTSCTFIAIFLFITAALSA*ARAKPN Trigger: GTTGGGTTTTGCTCTGGCTCAGGCAGAAAGTGCTGC...TGTTATGAATAAGAAAATTGCAATGAATGTACAACTCGTCCCTCTAATGGGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR GCA 90 bp | ATAGGGATCTGTCATTACTGGATAGTAGACTGCTCCATGAGGGAGAGGTACAGCGAAACAGCCCTAAACTaGCTAAATATTCATCCATTG | + |
Preference number: 2 (lower is better) Translates to: IGICHYWIVDCSMRERYSETALN*LNIHPL Trigger: CAATGGATGAATATTTAGGCAGTTTAGGGCTGTTTC...GCTGTACCTCTCCCTCATGGAGCAGTCTACTATCCAGTAATGACAGATCCCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR-3UTR GCA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACCATGACCATAATGCATaGTGTGCTGAATCCTGGATG | + |
Preference number: 2 (lower is better) Translates to: ANAKQNTMCLQNWLISGYHDHNA*CAESWM Trigger: CATCCAGGATTCAGCACAGCATGCATTATGGTCATG...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR CCA 90 bp | AGAAGATGGTCCACTGTCCTGAAGAGACAGGTTTGCTGTAGATACAGTTGTGGTATTTCGATAGATTTCTaGATCCAGAGCTTTCAGCAC | + |
Preference number: 2 (lower is better) Translates to: RRWSTVLKRQVCCRYSCGISIDF*IQSFQH Trigger: GTGCTGAAAGCTCTGGATCCAGAAATCTATCGAAAT...ACCACAACTGTATCTACAGCAAACCTGTCTCTTCAGGACAGTGGACCATCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR TCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGCTGCACAGTTCGGTATaGCTGGAACTGGAACATGGC | + |
Preference number: 2 (lower is better) Translates to: NWLISGYNSVLTTLKRNLLHSSV*LELEHG Trigger: GCCATGTTCCAGTTCCAGTCATACCGAACTGTGCAG...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR GCA 90 bp | CCTAAACTGCCTAAATATTCATCCATTGATGCCTCATTCAAAGACTTCTGGCCGGACAAGACAGGACCCTaGAGGTACAATAAAAGAGAT | + |
Preference number: 2 (lower is better) Translates to: PKLPKYSSIDASFKDFWPDKTGP*RYNKRD Trigger: ATCTCTTTTATTGTACCTGCAGGGTCCTGTCTTGTC...CGGCCAGAAGTCTTTGAATGAGGCATCAATGGATGAATATTTAGGCAGTTTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145724.7 |
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3UTR-3UTR GCA 90 bp | CAGCTGTCTGTGAGTAGTATAGTAGAGGGTCATGACCATAATGCATGCTGTGCTGAAACAGCCCTAAACTaGCTAAATATTCATCCATTG | + |
Preference number: 2 (lower is better) Translates to: QLSVSSIVEGHDHNACCAETALN*LNIHPL Trigger: CAATGGATGAATATTTAGGCAGTTTAGGGCTGTTTC...AGCACAGCATGCATTATGGTCATGACCCTCTACTATACTACTCACAGACAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR-3UTR CCA 90 bp | AAGATCCCTCCACATAAGACTCAAAAGCTTGTTGGTTTTCCTTCATATATGAGAGGCAAGAGGCATCCTTaGCAACCACCTTTCGAAACA | + |
Preference number: 2 (lower is better) Translates to: KIPPHKTQKLVGFPSYMRGKRHP*QPPFET Trigger: TGTTTCGAAAGGTGGTTGCCAAGGATGCCTCTTGCC...TCTCATATATGAAGGAAAACCAACAAGCTTTTGAGTCTTATGTGGAGGGATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000145724.7 ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR-3UTR CCA 90 bp | AAGGAGACCCATAGGGATCTGTCATTACTGGATAGTAGACTGCTCCATGAGGGAGACTCAAAAGCTTGTTaGTTTTCCTTCATATATGAG | + |
Preference number: 2 (lower is better) Translates to: KETHRDLSLLDSRLLHEGDSKAC*FSFIYE Trigger: CTCATATATGAAGGAAAACCAACAAGCTTTTGAGTC...TCCCTCATGGAGCAGTCTACTATCCAGTAATGACAGATCCCTATGGGTCTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR-3UTR CCA 90 bp | GAAAAGTATCATTTGTTGATACATCTGCCTGTGTGCCATCCTCTCTCACCACATTTCCACTCCATTCTCTaGAGCAAAACCATATTGGCA | + |
Preference number: 2 (lower is better) Translates to: EKYHLLIHLPVCHPLSPHFHSIL*SKTILA Trigger: TGCCAATATGGTTTTGCTCCAGAGAATGGAGTGGAA...ATGTGGTGAGAGAGGATGGCACACAGGCAGATGTATCAACAAATGATACTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR GCA 90 bp | CTTCATGTTCATATCTGTCATAACTATTTCAGGGAAATAGCCTCCAGTTATAGTCCAGGAAGGAAGAAGTaGCACTTGGTTGACTGGTCT | + |
Preference number: 2 (lower is better) Translates to: LHVHICHNYFREIASSYSPGRKK*HLVDWS Trigger: AGACCAGTCAACCAAGTGGCACTTCTTCCTTCCTGG...ACTATAACTGGAGGCTATTTCCCTGAAATAGTTATGACAGATATGAACATGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR GCA 90 bp | AATCAAATCCCAACAAAGGAGACCCATAGGGATCTGTCATTACTGGATAGTAGAAATTCAAAGGTGGTTTaGATGAGTTATAGCCCTGCC | + |
Preference number: 2 (lower is better) Translates to: NQIPTKETHRDLSLLDSRNSKVV*MSYSPA Trigger: GGCAGGGCTATAACTCATGCAAACCACCTTTGAATT...TCTACTATCCAGTAATGACAGATCCCTATGGGTCTCCTTTGTTGGGATTTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR TCA 90 bp | AATAAAGATAATCTCCATGATATCCTCCATTATCACAGTGGTCATTACTGTCTCGGGAAACAGCATCTTTaGCGGACTTTCTGGAACCTT | + |
Preference number: 2 (lower is better) Translates to: NKDNLHDILHYHSGHYCLGKQHL*RTFWNL Trigger: AAGGTTCCAGAAAGTCCGTCAAAGATGCTGTTTCCC...GAGACAGTAATGACCACTGTGATAATGGAGGATATCATGGAGATTATCTTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR TCA 90 bp | TTCTTCCACTCCATTCTCTGGAGCAAAACCATATTGGCATCCCTTATTCATGCAATAATATTTTCCACCTaGTTCCATGCAAACCTGACA | + |
Preference number: 2 (lower is better) Translates to: FFHSILWSKTILASLIHAIIFST*FHANLT Trigger: TGTCAGGTTTGCATGGAATCAGGTGGAAAATATTAT...TGCATGAATAAGGGATGCCAATATGGTTTTGCTCCAGAGAATGGAGTGGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR CCA 90 bp | ATACAAGTACTTTACTCACTAAACAATTTCCCCAGCCCTTGTCTATTTTACAGGAGATACACCTGCTTCTaGCTCCCAAAGGTTAGAATT | + |
Preference number: 2 (lower is better) Translates to: IQVLYSLNNFPSPCLFYRRYTCF*LPKVRI Trigger: AATTCTAACCTTTGGGAGCCAGAAGCAGGTGTATCT...CCTGTAAAATAGACAAGGGCTGGGGAAATTGTTTAGTGAGTAAAGTACTTGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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3UTR-3UTR CCA 90 bp | CATTCTACCTATATATCTCCATGTACTCATGTGAATATAGCCATGGATCCTATAAAGACAGAGTTTCTCTaGGTAGAAAAGGATGGCCCT | + |
Preference number: 2 (lower is better) Translates to: HSTYISPCTHVNIAMDPIKTEFL*VEKDGP Trigger: AGGGCCATCCTTTTCTACCCAGAGAAACTCTGTCTT...TATAGGATCCATGGCTATATTCACATGAGTACATGGAGATATATAGGTAGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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3UTR-3UTR CCA 90 bp | GAAAAGTATCATTTGTTGATACATCTGCCTGTGTGCCATCCTCTCTCACCACATGACTCAAAAGCTTGTTaGTTTTCCTTCATATATGAG | + |
Preference number: 2 (lower is better) Translates to: EKYHLLIHLPVCHPLSPHDSKAC*FSFIYE Trigger: CTCATATATGAAGGAAAACCAACAAGCTTTTGAGTC...ATGTGGTGAGAGAGGATGGCACACAGGCAGATGTATCAACAAATGATACTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR-3UTR GCA 90 bp | TTGCCCATTAGAGGGACGAGTTGTACATTCATTGCAATTTTCTTATTCATAACAGCTTGCCCAAGAAACTaGAATTGCTGCAGAATTTTC | + |
Preference number: 2 (lower is better) Translates to: LPIRGTSCTFIAIFLFITACPRN*NCCRIF Trigger: GAAAATTCTGCAGCAATTGCAGTTTCTTGGGCAAGC...TGTTATGAATAAGAAAATTGCAATGAATGTACAACTCGTCCCTCTAATGGGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR TCA 90 bp | TCACATTCTACCTATATATCTCCATGTACTCATGTGAATATAGCCATGGATCCTTTTTATCATATCCCATaGACTGGACTTAGGGGTATT | + |
Preference number: 2 (lower is better) Translates to: SHSTYISPCTHVNIAMDPFYHIP*TGLRGI Trigger: AATACCCCTAAGTCCAGTTCATGGGATATGATAAAA...AGGATCCATGGCTATATTCACATGAGTACATGGAGATATATAGGTAGAATGTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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3UTR-3UTR TCA 90 bp | TTGCCCATTAGAGGGACGAGTTGTACATTCATTGCAATTTTCTTATTCATAACATCCCTCGAAATTTCTTaGACATCTTCTTTCGTTGCT | + |
Preference number: 2 (lower is better) Translates to: LPIRGTSCTFIAIFLFITSLEIS*TSSFVA Trigger: AGCAACGAAAGAAGATGTTCAAGAAATTTCGAGGGA...TGTTATGAATAAGAAAATTGCAATGAATGTACAACTCGTCCCTCTAATGGGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR CCA 90 bp | TTCTACCTATATATCTCCATGTACTCATGTGAATATAGCCATGGATCCTATAGTAAATATTACCAGGAATaGTGGCATGTGCCTGTAATC | + |
Preference number: 2 (lower is better) Translates to: FYLYISMYSCEYSHGSYSKYYQE*WHVPVI Trigger: GATTACAGGCACATGCCACCATTCCTGGTAATATTT...ACTATAGGATCCATGGCTATATTCACATGAGTACATGGAGATATATAGGTAGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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3UTR-3UTR CCA 90 bp | CTTCATGTTCATATCTGTCATAACTATTTCAGGGAAATAGCCTCCAGTTATAGTCATTACGAATTGGTATaGCATTCCAGGAAGGAAGAA | + |
Preference number: 2 (lower is better) Translates to: LHVHICHNYFREIASSYSHYELV*HSRKEE Trigger: TTCTTCCTTCCTGGAATGCCATACCAATTCGTAATG...ACTATAACTGGAGGCTATTTCCCTGAAATAGTTATGACAGATATGAACATGAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR GCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGTTTTTCCATCCTTTTTaGATTGTGCATGGGATGATG | + |
Preference number: 2 (lower is better) Translates to: NWLISGYNSVLTTLKRNLFFHPF*IVHGMM Trigger: CATCATCCCATGCACAATGCAAAAAGGATGGAAAAA...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR CCA 72 bp | AGGCGGCGGCGGCGGCGGCGGTGGTGGTGGTGGTGGTaGAAGAGGAAACCCCGAAGCATCTCCTGCTTCAAG | + |
Preference number: 3 (lower is better) Translates to: RRRRRRRWWWWW*KRKPRSISCFK Trigger: CTTGAAGCAGGAGATGCTTCGGGGTTTCCTCTTCCACCACCACCACCACCACCGCCGCCGCCGCCGCCGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000198039.5 |
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3UTR TCA 72 bp | GAATCTTGGCACTTCCCAGAAGCACAAGCAAGAGGCTaGCTGGCGCAGGACAAGACAGGACCCTGCAGGTAC | + |
Preference number: 3 (lower is better) Translates to: ESWHFPEAQARG*LAQDKTGPCRY Trigger: GTACCTGCAGGGTCCTGTCTTGTCCTGCGCCAGTCAGCCTCTTGCTTGTGCTTCTGGGAAGTGCCAAGATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145724.7 |
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3UTR CCA 72 bp | CTTGGCACTTCCCAGAAGCACAAGCAAGAGGCTGACTaGCGCAGGACAAGACAGGACCCTGCAGGTACAATA | + |
Preference number: 3 (lower is better) Translates to: LGTSQKHKQEAD*RRTRQDPAGTI Trigger: TATTGTACCTGCAGGGTCCTGTCTTGTCCTGCGCCAGTCAGCCTCTTGCTTGTGCTTCTGGGAAGTGCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145724.7 |
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3UTR TCA 72 bp | TGTGTGCCATCCTCTCTCACCACATCACTGTACACCTaGGGAGCACTTTGGTCTACGAGGGGTTGCTCAGTA | + |
Preference number: 3 (lower is better) Translates to: CVPSSLTTSLYT*GALWSTRGCSV Trigger: TACTGAGCAACCCCTCGTAGACCAAAGTGCTCCTCAGGTGTACAGTGATGTGGTGAGAGAGGATGGCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR CAA 90 bp | GCATTCCAGGAAGGAAGAAGTGCCACTTGGTTGACTGGTCTTACATGGGCCAGCGCCATTATCTGTGACTaGAGTTGGTGGCTTTCCAGG | + |
Preference number: 3 (lower is better) Translates to: AFQEGRSATWLTGLTWASAIICD*SWWLSR Trigger: CCTGGAAAGCCACCAACTCAAGTCACAGATAATGGC...GCTGGCCCATGTAAGACCAGTCAACCAAGTGGCACTTCTTCCTTCCTGGAATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR CAA 90 bp | CTGCGCAGAAGCACCACATGCTGCATTAACTGGATGCCACATAGCAATACTGGAAACCTGTTCTTGTTGTaGCTGCTGTTGTTGCGGCGG | + |
Preference number: 3 (lower is better) Translates to: LRRSTTCCINWMPHSNTGNLFLL*LLLLRR Trigger: CCGCCGCAACAACAGCAGCAACAACAAGAACAGGTT...TCCAGTATTGCTATGTGGCATCCAGTTAATGCAGCATGTGGTGCTTCTGCGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR TCA 72 bp | GTATGGCATTCCAGGAAGGAAGAAGTGCCACTTGGTTaGCTGGTCTTACATGGGCCAGCGGAATTGAATGCC | + |
Preference number: 3 (lower is better) Translates to: VWHSRKEEVPLG*LVLHGPAELNA Trigger: GGCATTCAATTCCGCTGGCCCATGTAAGACCAGTCAACCAAGTGGCACTTCTTCCTTCCTGGAATGCCATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR GCA 72 bp | TCTTTCTGTCCCTTGCTTATTGCCTTCTGGTGTACTTaGAGCACTGGAACAGGCGGCAGCCTCTTCAGTTCT | + |
Preference number: 3 (lower is better) Translates to: SFCPLLIAFWCT*STGTGGSLFSS Trigger: AGAACTGAAGAGGCTGCCGCCTGTTCCAGTGCTGCAAGTACACCAGAAGGCAATAAGCAAGGGACAGAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR CCA 72 bp | AACCTTTTGTCTTTCTGTCCCTTGCTTATTGCCTTCTaGTGTACTTGCAGCACTGGAACAGGCGGCAGCCTC | + |
Preference number: 3 (lower is better) Translates to: NLLSFCPLLIAF*CTCSTGTGGSL Trigger: GAGGCTGCCGCCTGTTCCAGTGCTGCAAGTACACCAGAAGGCAATAAGCAAGGGACAGAAAGACAAAAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
||
3UTR-3UTR CAA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACTGGCCAGCACTCTCCTaGGGATCTCCCAACCGTTCC | + |
Preference number: 3 (lower is better) Translates to: ANAKQNTMCLQNWLISGYWPALS*GSPNRS Trigger: GGAACGGTTGGGAGATCCCAAGGAGAGTGCTGGCCA...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
||
3UTR-3UTR CAA 90 bp | CATAGCACCATGGATCTGCGCAGAAGCACCACATGCTGCATTAACTGGATGCCATTGGTCTACGAGGGGTaGCTCAGTACAATCTGGATA | + |
Preference number: 3 (lower is better) Translates to: HSTMDLRRSTTCCINWMPLVYEG*LSTIWI Trigger: TATCCAGATTGTACTGAGCAACCCCTCGTAGACCAA...TGGCATCCAGTTAATGCAGCATGTGGTGCTTCTGCGCAGATCCATGGTGCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
||
3UTR TCA 72 bp | GGAACAGGCGGCAGCCTCTTCAGTTCTATCTTCGGTTaGACTCTTCTGATCACTACTGCCTTCTACACTTGC | + |
Preference number: 3 (lower is better) Translates to: GTGGSLFSSIFG*TLLITTAFYTC Trigger: GCAAGTGTAGAAGGCAGTAGTGATCAGAAGAGTTCAACCGAAGATAGAACTGAAGAGGCTGCCGCCTGTTCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
||
3UTR GCA 72 bp | AGACCCATAGGGATCTGTCATTACTGGATAGTAGACTaGTCCATGAGGGAGAGGTACAGCATCAGCAATGGG | + |
Preference number: 3 (lower is better) Translates to: RPIGICHYWIVD*SMRERYSISNG Trigger: CCCATTGCTGATGCTGTACCTCTCCCTCATGGAGCAGTCTACTATCCAGTAATGACAGATCCCTATGGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
||
3UTR CCA 72 bp | AGAATGCAGGTAAGAATAGGCAGTGGCCACAAGTACTaGAGCTTGTGTAGGCAGGTATCCGAAGCAGCTCAA | + |
Preference number: 3 (lower is better) Translates to: RMQVRIGSGHKY*SLCRQVSEAAQ Trigger: TTGAGCTGCTTCGGATACCTGCCTACACAAGCTCCAGTACTTGTGGCCACTGCCTATTCTTACCTGCATTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000145724.7 ENSMUST00000154827.8 ENSMUST00000197316.5 |
||
3UTR CCA 72 bp | GTCATGACCATAATGCATGCTGTGCTGAATCCTGGATaGAACAAGGGGATCTCCCCTGCTATAAGCCATGGT | + |
Preference number: 3 (lower is better) Translates to: VMTIMHAVLNPG*NKGISPAISHG Trigger: ACCATGGCTTATAGCAGGGGAGATCCCCTTGTTCCATCCAGGATTCAGCACAGCATGCATTATGGTCATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
||
3UTR CCA 72 bp | GCTGCAGCTGCTGCTGCACATGTGGCATATAAACCATaGGATGCCAGTAGTTGTGATGATAGCACTGCAATC | + |
Preference number: 3 (lower is better) Translates to: AAAAAAHVAYKP*DASSCDDSTAI Trigger: GATTGCAGTGCTATCATCACAACTACTGGCATCCCATGGTTTATATGCCACATGTGCAGCAGCAGCTGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
||
3UTR CCA 72 bp | TCCCAACAAAGGAGACCCATAGGGATCTGTCATTACTaGATAGTAGACTGCTCCATGAGGGAGAGGTACAGC | + |
Preference number: 3 (lower is better) Translates to: SQQRRPIGICHY*IVDCSMRERYS Trigger: GCTGTACCTCTCCCTCATGGAGCAGTCTACTATCCAGTAATGACAGATCCCTATGGGTCTCCTTTGTTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
||
3UTR-3UTR CAA 90 bp | CTGCCTGAGCCAGAGCAAAACCCAACTTTAGGATTTGGCAAGTTTTGCTTGCTTAGGCAAGAGGCATCCTaGGCAACCACCTTTCGAAAC | + |
Preference number: 3 (lower is better) Translates to: LPEPEQNPTLGFGKFCLLRQEAS*ATTFRN Trigger: GTTTCGAAAGGTGGTTGCCAAGGATGCCTCTTGCCT...AAGCAAGCAAAACTTGCCAAATCCTAAAGTTGGGTTTTGCTCTGGCTCAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
||
3UTR-3UTR CAA 90 bp | AAGGAGACCCATAGGGATCTGTCATTACTGGATAGTAGACTGCTCCATGAGGGAGCCATTATCTGTGACTaGAGTTGGTGGCTTTCCAGG | + |
Preference number: 3 (lower is better) Translates to: KETHRDLSLLDSRLLHEGAIICD*SWWLSR Trigger: CCTGGAAAGCCACCAACTCAAGTCACAGATAATGGC...TCCCTCATGGAGCAGTCTACTATCCAGTAATGACAGATCCCTATGGGTCTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
||
3UTR-3UTR CAA 90 bp | GCATTCCAGGAAGGAAGAAGTGCCACTTGGTTGACTGGTCTTACATGGGCCAGCACTTTCTGGAACCTTTaGTCTTTCTGTCCCTTGCTT | + |
Preference number: 3 (lower is better) Translates to: AFQEGRSATWLTGLTWASTFWNL*SFCPLL Trigger: AAGCAAGGGACAGAAAGACAAAAGGTTCCAGAAAGT...GCTGGCCCATGTAAGACCAGTCAACCAAGTGGCACTTCTTCCTTCCTGGAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
||
3UTR TCA 72 bp | AAAGACAGAGTTTCTCTGGGTAGAAAAGGATGGCCCTaGACTCAAGATACACCTGCTTCTGGCTCCCAAAGG | + |
Preference number: 3 (lower is better) Translates to: KDRVSLGRKGWP*TQDTPASGSQR Trigger: CCTTTGGGAGCCAGAAGCAGGTGTATCTTGAGTTCAGGGCCATCCTTTTCTACCCAGAGAAACTCTGTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
||
3UTR CCA 72 bp | ATTGGTATGGCATTCCAGGAAGGAAGAAGTGCCACTTaGTTGACTGGTCTTACATGGGCCAGCGGAATTGAA | + |
Preference number: 3 (lower is better) Translates to: IGMAFQEGRSAT*LTGLTWASGIE Trigger: TTCAATTCCGCTGGCCCATGTAAGACCAGTCAACCAAGTGGCACTTCTTCCTTCCTGGAATGCCATACCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
||
3UTR-3UTR CAA 90 bp | ATAGGGATCTGTCATTACTGGATAGTAGACTGCTCCATGAGGGAGAGGTACAGCGAACTGGAACATGGCTaGCCCAAGAAACTGCAATTG | + |
Preference number: 3 (lower is better) Translates to: IGICHYWIVDCSMRERYSELEHG*PKKLQL Trigger: CAATTGCAGTTTCTTGGGCAAGCCATGTTCCAGTTC...GCTGTACCTCTCCCTCATGGAGCAGTCTACTATCCAGTAATGACAGATCCCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR CAA 90 bp | TTTTGTATCTTGGGGCAGATCACTTCCACTCGGATCATAGGAATAAGGCGGCGGGGACTTTCTGGAACCTaGTCTTCAAAGCCATTATCT | + |
Preference number: 3 (lower is better) Translates to: FCILGQITSTRIIGIRRRGLSGT*SSKPLS Trigger: AGATAATGGCTTTGAAGACAAGGTTCCAGAAAGTCC...CCGCCGCCTTATTCCTATGATCCGAGTGGAAGTGATCTGCCCCAAGATACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198039.5 |
||
3UTR GCA 72 bp | GACGGACTTTCTGGAACCTTTTGTCTTTCTGTCCCTTaGTTATTGCCTTCTGGTGTACTTGCAGCACTGGAA | + |
Preference number: 3 (lower is better) Translates to: DGLSGTFCLSVP*LLPSGVLAALE Trigger: TTCCAGTGCTGCAAGTACACCAGAAGGCAATAAGCAAGGGACAGAAAGACAAAAGGTTCCAGAAAGTCCGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR GCA 72 bp | GTGAGTAGTATAGTAGAGGGTCATGACCATAATGCATaGTGTGCTGAATCCTGGATGGAACAAGGGGATCTC | + |
Preference number: 3 (lower is better) Translates to: VSSIVEGHDHNA*CAESWMEQGDL Trigger: GAGATCCCCTTGTTCCATCCAGGATTCAGCACAGCATGCATTATGGTCATGACCCTCTACTATACTACTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR GCA 72 bp | ATTCATAGCACCATGGATCTGCGCAGAAGCACCACATaGTGCATTAACTGGATGCCACATAGCAATACTGGA | + |
Preference number: 3 (lower is better) Translates to: IHSTMDLRRSTT*CINWMPHSNTG Trigger: TCCAGTATTGCTATGTGGCATCCAGTTAATGCAGCATGTGGTGCTTCTGCGCAGATCCATGGTGCTATGAAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR CCA 72 bp | GCAAGTTTTGCTTGCTTATTAAGTGAGACGAATCCCTaGGCATCCCATATCCCCGACCTTGTCTTTGAGATG | + |
Preference number: 3 (lower is better) Translates to: ASFACLLSETNP*ASHIPDLVFEM Trigger: CATCTCAAAGACAAGGTCGGGGATATGGGATGCCCAGGGATTCGTCTCACTTAATAAGCAAGCAAAACTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR CCA 72 bp | TCTCCTGCACAGTTCGGTATGACTGGAACTGGAACATaGCTTGCCCAAGAAACTGCAATTGCTGCAGAATTT | + |
Preference number: 3 (lower is better) Translates to: SPAQFGMTGTGT*LAQETAIAAEF Trigger: AAATTCTGCAGCAATTGCAGTTTCTTGGGCAAGCCATGTTCCAGTTCCAGTCATACCGAACTGTGCAGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR CCA 72 bp | TTCATTATCTCCTGCACAGTTCGGTATGACTGGAACTaGAACATGGCTTGCCCAAGAAACTGCAATTGCTGC | + |
Preference number: 3 (lower is better) Translates to: FIISCTVRYDWN*NMACPRNCNCC Trigger: GCAGCAATTGCAGTTTCTTGGGCAAGCCATGTTCCAGTTCCAGTCATACCGAACTGTGCAGGAGATAATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR CAA 90 bp | GGGATCTCCCAACCGTTCCAGATATTTCTCAAAAGATCCCTCCACATAAGACTCAAGAGATGGCCTTCTTaGTGCAACTGCTTTGCCAAT | + |
Preference number: 3 (lower is better) Translates to: GISQPFQIFLKRSLHIRLKRWPS*CNCFAN Trigger: ATTGGCAAAGCAGTTGCACAAAGAAGGCCATCTCTT...GAGTCTTATGTGGAGGGATCTTTTGAGAAATATCTGGAACGGTTGGGAGATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145724.7 |
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3UTR-3UTR CAA 90 bp | TGTGCCATCCTCTCTCACCACATCACTGTACACCTGAGGAGCACTTTGGTCTACGAACATCTTCTTTCGTaGCTTCATGTTCATATCTGT | + |
Preference number: 3 (lower is better) Translates to: CAILSHHITVHLRSTLVYEHLLS*LHVHIC Trigger: ACAGATATGAACATGAAGCAACGAAAGAAGATGTTC...GTAGACCAAAGTGCTCCTCAGGTGTACAGTGATGTGGTGAGAGAGGATGGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR TCA 72 bp | GCAGCCTCTTCAGTTCTATCTTCGGTTGAACTCTTCTaGTCACTACTGCCTTCTACACTTGCAGTCAAAGCA | + |
Preference number: 3 (lower is better) Translates to: AASSVLSSVELF*SLLPSTLAVKA Trigger: TGCTTTGACTGCAAGTGTAGAAGGCAGTAGTGATCAGAAGAGTTCAACCGAAGATAGAACTGAAGAGGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR TCA 72 bp | AGGTACAGCATCAGCAATGGGAAAAGTATCATTTGTTaGTACATCTGCCTGTGTGCCATCCTCTCTCACCAC | + |
Preference number: 3 (lower is better) Translates to: RYSISNGKSIIC*YICLCAILSHH Trigger: GTGGTGAGAGAGGATGGCACACAGGCAGATGTATCAACAAATGATACTTTTCCCATTGCTGATGCTGTACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR GCA 72 bp | AGTGGTCATTACTGTCTCCAGAATTCAAAGGTGGTTTaGATGAGTTATAGCCCTGCCTTGCAACACAGTAGC | + |
Preference number: 3 (lower is better) Translates to: SGHYCLQNSKVV*MSYSPALQHSS Trigger: GCTACTGTGTTGCAAGGCAGGGCTATAACTCATGCAAACCACCTTTGAATTCTGGAGACAGTAATGACCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR CCA 72 bp | AAAAGGATGGCCCTGAACTCAAGATACACCTGCTTCTaGCTCCCAAAGGTTAGAATTAAAGGCATTCACCAC | + |
Preference number: 3 (lower is better) Translates to: KRMALNSRYTCF*LPKVRIKGIHH Trigger: GTGGTGAATGCCTTTAATTCTAACCTTTGGGAGCCAGAAGCAGGTGTATCTTGAGTTCAGGGCCATCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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3UTR CCA 72 bp | AGCACTTTGGTCTACGAGGGGTTGCTCAGTACAATCTaGATAACTCTCTCCATGAACCTGTTCTTGTTGTTG | + |
Preference number: 3 (lower is better) Translates to: STLVYEGLLSTI*ITLSMNLFLLL Trigger: CAACAACAAGAACAGGTTCATGGAGAGAGTTATCCAGATTGTACTGAGCAACCCCTCGTAGACCAAAGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR CAA 90 bp | GAAAAGTATCATTTGTTGATACATCTGCCTGTGTGCCATCCTCTCTCACCACATAGGGAAACAGCATCTTaGACGGACTTTCTGGAACCT | + |
Preference number: 3 (lower is better) Translates to: EKYHLLIHLPVCHPLSPHRETAS*TDFLEP Trigger: AGGTTCCAGAAAGTCCGTCAAAGATGCTGTTTCCCT...ATGTGGTGAGAGAGGATGGCACACAGGCAGATGTATCAACAAATGATACTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR CAA 90 bp | GCATCAGCAATGGGAAAAGTATCATTTGTTGATACATCTGCCTGTGTGCCATCCCTCTTCCATTACGAATaGGTATGGCATTCCAGGAAG | + |
Preference number: 3 (lower is better) Translates to: ASAMGKVSFVDTSACVPSLFHYE*VWHSRK Trigger: CTTCCTGGAATGCCATACCAATTCGTAATGGAAGAG...GGATGGCACACAGGCAGATGTATCAACAAATGATACTTTTCCCATTGCTGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR CAA 90 bp | ATAGGGATCTGTCATTACTGGATAGTAGACTGCTCCATGAGGGAGAGGTACAGCTTGAGGGTAAAAATGTaGACTAGACAGAATATGGCC | + |
Preference number: 3 (lower is better) Translates to: IGICHYWIVDCSMRERYSLRVKM*TRQNMA Trigger: GGCCATATTCTGTCTAGTCAACATTTTTACCCTCAA...GCTGTACCTCTCCCTCATGGAGCAGTCTACTATCCAGTAATGACAGATCCCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR TCA 72 bp | CACTTGGTTGACTGGTCTTACATGGGCCAGCGGAATTaGATGCCTTTCTGCAAATTCCTCAATGAAAACTAC | + |
Preference number: 3 (lower is better) Translates to: HLVDWSYMGQRN*MPFCKFLNENY Trigger: GTAGTTTTCATTGAGGAATTTGCAGAAAGGCATTCAATTCCGCTGGCCCATGTAAGACCAGTCAACCAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR GCA 72 bp | CACAGAAGATGGTCCACTGTCCTGAAGAGACAGGTTTaGTGTAGATACAGTTGTGGTATACACACTAGAAGT | + |
Preference number: 3 (lower is better) Translates to: HRRWSTVLKRQV*CRYSCGIHTRS Trigger: ACTTCTAGTGTGTATACCACAACTGTATCTACAGCAAACCTGTCTCTTCAGGACAGTGGACCATCTTCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR GCA 72 bp | AGAAATATCAGAGGTACGAAGAGCTTCATTATCTCCTaGACAGTTCGGTATGACTGGAACTGGAACATGGCT | + |
Preference number: 3 (lower is better) Translates to: RNIRGTKSFIIS*TVRYDWNWNMA Trigger: AGCCATGTTCCAGTTCCAGTCATACCGAACTGTGCAGGAGATAATGAAGCTCTTCGTACCTCTGATATTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR CAA 90 bp | AATCAAATCCCAACAAAGGAGACCCATAGGGATCTGTCATTACTGGATAGTAGACATGGGCCAGCGGAATaGAATGCCTTTCTGCAAATT | + |
Preference number: 3 (lower is better) Translates to: NQIPTKETHRDLSLLDSRHGPAE*NAFLQI Trigger: AATTTGCAGAAAGGCATTCAATTCCGCTGGCCCATG...TCTACTATCCAGTAATGACAGATCCCTATGGGTCTCCTTTGTTGGGATTTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR TCA 72 bp | AGGTGGAGGTACAAAGCCAGGTTGTATGGCATTCTGTaGAGAAATATCAGAGGTACGAAGAGCTTCATTATC | + |
Preference number: 3 (lower is better) Translates to: RWRYKARLYGIL*RNIRGTKSFII Trigger: GATAATGAAGCTCTTCGTACCTCTGATATTTCTTCACAGAATGCCATACAACCTGGCTTTGTACCTCCACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR GCA 72 bp | CATCCTTGGCAACCACCTTTCGAAACAGCCCTAAACTaGCTAAATATTCATCCATTGATGCCTCATTCAAAG | + |
Preference number: 3 (lower is better) Translates to: HPWQPPFETALN*LNIHPLMPHSK Trigger: CTTTGAATGAGGCATCAATGGATGAATATTTAGGCAGTTTAGGGCTGTTTCGAAAGGTGGTTGCCAAGGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000145724.7 ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR GCA 72 bp | CAGTTCTATCTTCGGTTGAACTCTTCTGATCACTACTaGCTTCTACACTTGCAGTCAAAGCATGGTGTTTGT | + |
Preference number: 3 (lower is better) Translates to: QFYLRLNSSDHY*LLHLQSKHGVC Trigger: ACAAACACCATGCTTTGACTGCAAGTGTAGAAGGCAGTAGTGATCAGAAGAGTTCAACCGAAGATAGAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR GCA 72 bp | TGGTTGACTGGTCTTACATGGGCCAGCGGAATTGAATaGCTTTCTGCAAATTCCTCAATGAAAACTACTACT | + |
Preference number: 3 (lower is better) Translates to: WLTGLTWASGIE*LSANSSMKTTT Trigger: AGTAGTAGTTTTCATTGAGGAATTTGCAGAAAGGCATTCAATTCCGCTGGCCCATGTAAGACCAGTCAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR-3UTR CAA 90 bp | TTCCAGATATTTCTCAAAAGATCCCTCCACATAAGACTCAAAAGCTTGTTGGTTAGTTGCTGCAGAATCTaGGCACTTCCCAGAAGCACA | + |
Preference number: 3 (lower is better) Translates to: FQIFLKRSLHIRLKSLLVSCCRI*ALPRST Trigger: TGTGCTTCTGGGAAGTGCCAAGATTCTGCAGCAACT...AACCAACAAGCTTTTGAGTCTTATGTGGAGGGATCTTTTGAGAAATATCTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145724.7 |
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3UTR-3UTR CAA 90 bp | AATCAAATCCCAACAAAGGAGACCCATAGGGATCTGTCATTACTGGATAGTAGACTCTTCCATTACGAATaGGTATGGCATTCCAGGAAG | + |
Preference number: 3 (lower is better) Translates to: NQIPTKETHRDLSLLDSRLFHYE*VWHSRK Trigger: CTTCCTGGAATGCCATACCAATTCGTAATGGAAGAG...TCTACTATCCAGTAATGACAGATCCCTATGGGTCTCCTTTGTTGGGATTTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR TCA 72 bp | TTGCTTGGTAACAGGTATTTTTACCATTCACTGTTGTaGATACTAGGCTGCTTAGTCCAATGTCTTCCAGGG | + |
Preference number: 3 (lower is better) Translates to: LLGNRYFYHSLL*ILGCLVQCLPG Trigger: CCCTGGAAGACATTGGACTAAGCAGCCTAGTATTCACAACAGTGAATGGTAAAAATACCTGTTACCAAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
||
3UTR CCA 72 bp | CTACACTTGCAGTCAAAGCATGGTGTTTGTTTCTCCTaGAACCACTTCGAAATAAATCGACTGCAGTTTTCA | + |
Preference number: 3 (lower is better) Translates to: LHLQSKHGVCFS*NHFEINRLQFS Trigger: TGAAAACTGCAGTCGATTTATTTCGAAGTGGTTCCAGGAGAAACAAACACCATGCTTTGACTGCAAGTGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR-3UTR CAA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACTTGAGGGTAAAAATGTaGACTAGACAGAATATGGCC | + |
Preference number: 3 (lower is better) Translates to: ANAKQNTMCLQNWLISGYLRVKM*TRQNMA Trigger: GGCCATATTCTGTCTAGTCAACATTTTTACCCTCAA...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
||
3UTR-3UTR CAA 90 bp | GAAAAGTATCATTTGTTGATACATCTGCCTGTGTGCCATCCTCTCTCACCACATGAACATCTTCTTTCGTaGCTTCATGTTCATATCTGT | + |
Preference number: 3 (lower is better) Translates to: EKYHLLIHLPVCHPLSPHEHLLS*LHVHIC Trigger: ACAGATATGAACATGAAGCAACGAAAGAAGATGTTC...ATGTGGTGAGAGAGGATGGCACACAGGCAGATGTATCAACAAATGATACTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
||
3UTR CCA 72 bp | AAATATTCATCCATTGATGCCTCATTCAAAGACTTCTaGCCGCAGTACTTTTTCCATCCTTTTTGCATTGTG | + |
Preference number: 3 (lower is better) Translates to: KYSSIDASFKDF*PQYFFHPFCIV Trigger: CACAATGCAAAAAGGATGGAAAAAGTACTGCGGCCAGAAGTCTTTGAATGAGGCATCAATGGATGAATATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000145724.7 ENSMUST00000154827.8 ENSMUST00000197316.5 |
||
3UTR-3UTR CAA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGACTTTCTGGAACCTTTaGTCTTTCTGTCCCTTGCTT | + |
Preference number: 3 (lower is better) Translates to: NWLISGYNSVLTTLKRNLTFWNL*SFCPLL Trigger: AAGCAAGGGACAGAAAGACAAAAGGTTCCAGAAAGT...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
||
3UTR CCA 72 bp | CATAACTATTTCAGGGAAATAGCCTCCAGTTATAGTTaGATAACCTCTTCCATTACGAATTGGTATGGCATT | + |
Preference number: 3 (lower is better) Translates to: HNYFREIASSYS*ITSSITNWYGI Trigger: AATGCCATACCAATTCGTAATGGAAGAGGTTATCCAACTATAACTGGAGGCTATTTCCCTGAAATAGTTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
||
3UTR-3UTR CAA 90 bp | AAGATCCCTCCACATAAGACTCAAAAGCTTGTTGGTTTTCCTTCATATATGAGACTTTGTGCAACTGCTTaGCCAATTCAAATTGATGAT | + |
Preference number: 3 (lower is better) Translates to: KIPPHKTQKLVGFPSYMRLCATA*PIQIDD Trigger: ATCATCAATTTGAATTGGCAAAGCAGTTGCACAAAG...TCTCATATATGAAGGAAAACCAACAAGCTTTTGAGTCTTATGTGGAGGGATCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145724.7 |
||
3UTR-3UTR CAA 90 bp | TTGCCCATTAGAGGGACGAGTTGTACATTCATTGCAATTTTCTTATTCATAACATGGGAAAAGTATCATTaGTTGATACATCTGCCTGTG | + |
Preference number: 3 (lower is better) Translates to: LPIRGTSCTFIAIFLFITWEKYH*LIHLPV Trigger: CACAGGCAGATGTATCAACAAATGATACTTTTCCCA...TGTTATGAATAAGAAAATTGCAATGAATGTACAACTCGTCCCTCTAATGGGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR GCA 72 bp | TCTTTCCCTCGAAATTTCTTGAACATCTTCTTTCGTTaGTTCATGTTCATATCTGTCATAACTATTTCAGGG | + |
Preference number: 3 (lower is better) Translates to: SFPRNFLNIFFR*FMFISVITISG Trigger: CCCTGAAATAGTTATGACAGATATGAACATGAAGCAACGAAAGAAGATGTTCAAGAAATTTCGAGGGAAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
||
CDS-3UTR TCA 90 bp | TTTAACATGCTGGCTACCAGGAAGCTGGCTCCAATGAACTTGCCCATTAGAGGGTGCTGCTCCTGCTGCTaGAGGCTCAAGATAGGCTGG | + |
Preference number: 4 (lower is better) Translates to: FNMLATRKLAPMNLPIRGCCSCC*RLKIGW Trigger: CCAGCCTATCTTGAGCCTTCAGCAGCAGGAGCAGCA...CCCTCTAATGGGCAAGTTCATTGGAGCCAGCTTCCTGGTAGCCAGCATGTTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
||
CDS-3UTR CCA 90 bp | TTTAACATGCTGGCTACCAGGAAGCTGGCTCCAATGAACTTGCCCATTAGAGGGGGCCAGCACTCTCCTTaGGATCTCCCAACCGTTCCA | + |
Preference number: 4 (lower is better) Translates to: FNMLATRKLAPMNLPIRGGQHSP*DLPTVP Trigger: TGGAACGGTTGGGAGATCCCAAGGAGAGTGCTGGCC...CCCTCTAATGGGCAAGTTCATTGGAGCCAGCTTCCTGGTAGCCAGCATGTTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000198039.5 ENSMUST00000238864.2 |
||
CDS-3UTR TCA 90 bp | TTTAACATGCTGGCTACCAGGAAGCTGGCTCCAATGAACTTGCCCATTAGAGGGGCAGCACTTTCTGCCTaGGCCAGAGCAAAACCCAAC | + |
Preference number: 4 (lower is better) Translates to: FNMLATRKLAPMNLPIRGAALSA*ARAKPN Trigger: GTTGGGTTTTGCTCTGGCTCAGGCAGAAAGTGCTGC...CCCTCTAATGGGCAAGTTCATTGGAGCCAGCTTCCTGGTAGCCAGCATGTTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
||
CDS-3UTR GCA 90 bp | TCGGAAATAGCACGAAAGAGGCAAGAGGCATCCTTGGCAACCACCTTTCGAAACGTTTGGGCACCACAGTaGCTCTACCAACTTGGAGGA | + |
Preference number: 4 (lower is better) Translates to: SEIARKRQEASLATTFRNVWAPQ*LYQLGG Trigger: TCCTCCAAGTTGGTAGAGGCACTGTGGTGCCCAAAC...GTTTCGAAAGGTGGTTGCCAAGGATGCCTCTTGCCTCTTTCGTGCTATTTCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145724.7 ENSMUST00000154827.8 |
||
CDS-3UTR CCA 90 bp | CAGCTGTCTGTGAGTAGTATAGTAGAGGGTCATGACCATAATGCATGCTGTGCTGGCCAGCACTCTCCTTaGGATCTCCCAACCGTTCCA | + |
Preference number: 4 (lower is better) Translates to: QLSVSSIVEGHDHNACCAGQHSP*DLPTVP Trigger: TGGAACGGTTGGGAGATCCCAAGGAGAGTGCTGGCC...AGCACAGCATGCATTATGGTCATGACCCTCTACTATACTACTCACAGACAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198039.5 |
||
3UTR CAA 72 bp | TGCTCGGAAATAGCACGAAAGAGGCAAGAGGCATCCTaGGCAACCACCTTTCGAAACAGCCCTAAACTGCCT | + |
Preference number: 4 (lower is better) Translates to: CSEIARKRQEAS*ATTFRNSPKLP Trigger: AGGCAGTTTAGGGCTGTTTCGAAAGGTGGTTGCCAAGGATGCCTCTTGCCTCTTTCGTGCTATTTCCGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000145724.7 ENSMUST00000154827.8 ENSMUST00000197316.5 |
||
3UTR CAA 72 bp | GGTATGGCATTCCAGGAAGGAAGAAGTGCCACTTGGTaGACTGGTCTTACATGGGCCAGCGGAATTGAATGC | + |
Preference number: 4 (lower is better) Translates to: GMAFQEGRSATW*TGLTWASGIEC Trigger: GCATTCAATTCCGCTGGCCCATGTAAGACCAGTCAACCAAGTGGCACTTCTTCCTTCCTGGAATGCCATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
||
CDS-3UTR TCA 90 bp | TTTAACATGCTGGCTACCAGGAAGCTGGCTCCAATGAACTTGCCCATTAGAGGGCAAAGGTGGTTTGCATaGGTTATAGCCCTGCCTTGC | + |
Preference number: 4 (lower is better) Translates to: FNMLATRKLAPMNLPIRGQRWFA*VIALPC Trigger: GCAAGGCAGGGCTATAACTCATGCAAACCACCTTTG...CCCTCTAATGGGCAAGTTCATTGGAGCCAGCTTCCTGGTAGCCAGCATGTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
||
CDS-3UTR GCA 90 bp | AGCACTCTCCTTGGGATCTCCCAACCGTTCCAGATATTTCTCAAAAGATCCCTCGTTTGGGCACCACAGTaGCTCTACCAACTTGGAGGA | + |
Preference number: 4 (lower is better) Translates to: STLLGISQPFQIFLKRSLVWAPQ*LYQLGG Trigger: TCCTCCAAGTTGGTAGAGGCACTGTGGTGCCCAAAC...GAGGGATCTTTTGAGAAATATCTGGAACGGTTGGGAGATCCCAAGGAGAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145724.7 ENSMUST00000154827.8 |
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3UTR CAA 72 bp | CTCTCTCACCACATCACTGTACACCTGAGGAGCACTTaGGTCTACGAGGGGTTGCTCAGTACAATCTGGATA | + |
Preference number: 4 (lower is better) Translates to: LSHHITVHLRST*VYEGLLSTIWI Trigger: TATCCAGATTGTACTGAGCAACCCCTCGTAGACCAAAGTGCTCCTCAGGTGTACAGTGATGTGGTGAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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CDS-3UTR TCA 90 bp | TTTAACATGCTGGCTACCAGGAAGCTGGCTCCAATGAACTTGCCCATTAGAGGGCCATTATCTGTGACTTaGGTTGGTGGCTTTCCAGGA | + |
Preference number: 4 (lower is better) Translates to: FNMLATRKLAPMNLPIRGPLSVT*VGGFPG Trigger: TCCTGGAAAGCCACCAACTCAAGTCACAGATAATGG...CCCTCTAATGGGCAAGTTCATTGGAGCCAGCTTCCTGGTAGCCAGCATGTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR GCA 90 bp | GTGAAACAACTGCTCGGAAATAGCACGAAAGAGGCAAGAGGCATCCTTGGCAACCTACCACAAGTGGTTTaGCTTTCTCCAGACTCTCCA | + |
Preference number: 4 (lower is better) Translates to: VKQLLGNSTKEARGILGNLPQVV*LSPDSP Trigger: TGGAGAGTCTGGAGAAAGGCAAACCACTTGTGGTAG...GTTGCCAAGGATGCCTCTTGCCTCTTTCGTGCTATTTCCGAGCAGTTGTTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145724.7 ENSMUST00000154827.8 |
||
CDS-3UTR GCA 90 bp | CTCTCATGTAATATAAACAAATACCCAGGAGCACAGGCTCCTGTTTGGATTTTTTGTGGCCACTGGTGCTaGTGCTGCTGCTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: LSCNINKYPGAQAPVWIFCGHWC*CCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAGCACCAGTGGCCACA...AAAAATCCAAACAGGAGCCTGTGCTCCTGGGTATTTGTTTATATTACATGAGAG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
||
CDS-3UTR CCA 90 bp | GGCAGTTGCTGCAGAATCTTGGCACTTCCCAGAAGCACAAGCAAGAGGCTGACTTACAACTACCACAAGTaGTTTGCCTTTCTCCAGACT | + |
Preference number: 4 (lower is better) Translates to: GSCCRILALPRSTSKRLTYNYHK*FAFLQT Trigger: AGTCTGGAGAAAGGCAAACCACTTGTGGTAGTTGTA...AGTCAGCCTCTTGCTTGTGCTTCTGGGAAGTGCCAAGATTCTGCAGCAACTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145724.7 |
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CDS-3UTR CCA 90 bp | TTTAACATGCTGGCTACCAGGAAGCTGGCTCCAATGAACTTGCCCATTAGAGGGAAGCATATAGCCAATTaGCCCGGGATTCATAGCACC | + |
Preference number: 4 (lower is better) Translates to: FNMLATRKLAPMNLPIRGKHIAN*PGIHST Trigger: GGTGCTATGAATCCCGGGCCAATTGGCTATATGCTT...CCCTCTAATGGGCAAGTTCATTGGAGCCAGCTTCCTGGTAGCCAGCATGTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
||
3UTR CAA 72 bp | CTTTCTGGAACCTTTTGTCTTTCTGTCCCTTGCTTATaGCCTTCTGGTGTACTTGCAGCACTGGAACAGGCG | + |
Preference number: 4 (lower is better) Translates to: LSGTFCLSVPCL*PSGVLAALEQA Trigger: CGCCTGTTCCAGTGCTGCAAGTACACCAGAAGGCAATAAGCAAGGGACAGAAAGACAAAAGGTTCCAGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR CAA 72 bp | AACATGCTGGCTACCAGGAAGCTGGCTCCAATGAACTaGCCCATTAGAGGGACGAGTTGTACATTCATTGCA | + |
Preference number: 4 (lower is better) Translates to: NMLATRKLAPMN*PIRGTSCTFIA Trigger: TGCAATGAATGTACAACTCGTCCCTCTAATGGGCAAGTTCATTGGAGCCAGCTTCCTGGTAGCCAGCATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 ENSMUST00000238864.2 |
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CDS-3UTR GCA 90 bp | ATGGCCCTGAACTCAAGATACACCTGCTTCTGGCTCCCAAAGGTTAGAATTAAAGTTTGGGCACCACAGTaGCTCTACCAACTTGGAGGA | + |
Preference number: 4 (lower is better) Translates to: MALNSRYTCFWLPKVRIKVWAPQ*LYQLGG Trigger: TCCTCCAAGTTGGTAGAGGCACTGTGGTGCCCAAAC...TTTAATTCTAACCTTTGGGAGCCAGAAGCAGGTGTATCTTGAGTTCAGGGCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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CDS-3UTR GCA 90 bp | ATAGCACGAAAGAGGCAAGAGGCATCCTTGGCAACCACCTTTCGAAACAGCCCTGACAAGACAGGACCCTaGAGGTACAATAAAAGAGAT | + |
Preference number: 4 (lower is better) Translates to: IARKRQEASLATTFRNSPDKTGP*RYNKRD Trigger: ATCTCTTTTATTGTACCTGCAGGGTCCTGTCTTGTC...AGGGCTGTTTCGAAAGGTGGTTGCCAAGGATGCCTCTTGCCTCTTTCGTGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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CDS-3UTR GCA 90 bp | TTTACTGCAAATTGTGCAAAAGATACTATAATACTGTGCGGTAGGACAGTTATGTGTTGCGGCGGCGGCTaGTGCTGTTGCGGCTGCTGT | + |
Preference number: 4 (lower is better) Translates to: FTANCAKDTIILCGRTVMCCGGG*CCCGCC Trigger: ACAGCAGCCGCAACAGCAGCAGCCGCCGCCGCAACA...CATAACTGTCCTACCGCACAGTATTATAGTATCTTTTGCACAATTTGCAGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR GCA 90 bp | CTCTCATGTAATATAAACAAATACCCAGGAGCACAGGCTCCTGTTTGGATTTTTTGTTGCTGCTGTTGTTaGGGCGGCGGCTGCTGCTGT | + |
Preference number: 4 (lower is better) Translates to: LSCNINKYPGAQAPVWIFCCCCC*GGGCCC Trigger: ACAGCAGCAGCCGCCGCCGCAACAACAGCAGCAACA...AAAAATCCAAACAGGAGCCTGTGCTCCTGGGTATTTGTTTATATTACATGAGAG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR GCA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACTGTTCTTGTTGTTGCTaGTGTTGTTGCGGCGGCGGC | + |
Preference number: 4 (lower is better) Translates to: ANAKQNTMCLQNWLISGYCSCCC*CCCGGG Trigger: GCCGCCGCCGCAACAACAGCAGCAACAACAAGAACA...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR TCA 90 bp | AACTGCTCGGAAATAGCACGAAAGAGGCAAGAGGCATCCTTGGCAACCACCTTTAACATCCAGAGTGAATaGCTCAGTACGGAATGGTTT | + |
Preference number: 4 (lower is better) Translates to: NCSEIARKRQEASLATTFNIQSE*LSTEWF Trigger: AAACCATTCCGTACTGAGTCATTCACTCTGGATGTT...AAAGGTGGTTGCCAAGGATGCCTCTTGCCTCTTTCGTGCTATTTCCGAGCAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145724.7 ENSMUST00000154827.8 |
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CDS-3UTR TCA 90 bp | TTTAACATGCTGGCTACCAGGAAGCTGGCTCCAATGAACTTGCCCATTAGAGGGAGACACAAGCTCTCCTaGTCTGTAAATGATGGATCT | + |
Preference number: 4 (lower is better) Translates to: FNMLATRKLAPMNLPIRGRHKLS*SVNDGS Trigger: AGATCCATCATTTACAGATCAGGAGAGCTTGTGTCT...CCCTCTAATGGGCAAGTTCATTGGAGCCAGCTTCCTGGTAGCCAGCATGTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR GCA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACTCTGGCAGCACTTTCTaGCTGAGCCAGAGCAAAACC | + |
Preference number: 4 (lower is better) Translates to: ANAKQNTMCLQNWLISGYSGSTF*LSQSKT Trigger: GGTTTTGCTCTGGCTCAGGCAGAAAGTGCTGCCAGA...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | ACACCTGCTTCTGGCTCCCAAAGGTTAGAATTAAAGGCATTCACCACCACTGCCTACAACTACCACAAGTaGTTTGCCTTTCTCCAGACT | + |
Preference number: 4 (lower is better) Translates to: TPASGSQRLELKAFTTTAYNYHK*FAFLQT Trigger: AGTCTGGAGAAAGGCAAACCACTTGTGGTAGTTGTA...GGCAGTGGTGGTGAATGCCTTTAATTCTAACCTTTGGGAGCCAGAAGCAGGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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CDS-3UTR CCA 90 bp | GTATCATTTGTTGATACATCTGCCTGTGTGCCATCCTCTCTCACCACATCACTGGTTGCTGCAGAATCTTaGCACTTCCCAGAAGCACAA | + |
Preference number: 4 (lower is better) Translates to: VSFVDTSACVPSSLTTSLVAAES*HFPEAQ Trigger: TTGTGCTTCTGGGAAGTGCCAAGATTCTGCAGCAAC...CAGTGATGTGGTGAGAGAGGATGGCACACAGGCAGATGTATCAACAAATGATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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CDS-3UTR CCA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACGCTTTTAGTTCCAGCTaGCCAGCACTCTCCTTGGGA | + |
Preference number: 4 (lower is better) Translates to: ANAKQNTMCLQNWLISGYAFSSS*PALSLG Trigger: TCCCAAGGAGAGTGCTGGCCAGCTGGAACTAAAAGC...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | TTTACTGCAAATTGTGCAAAAGATACTATAATACTGTGCGGTAGGACAGTTATGGTGCTGCCACTGGTGTaGCCACTGGTGCTGCTGCTG | + |
Preference number: 4 (lower is better) Translates to: FTANCAKDTIILCGRTVMVLPLV*PLVLLL Trigger: CAGCAGCAGCACCAGTGGCCACACCAGTGGCAGCAC...CATAACTGTCCTACCGCACAGTATTATAGTATCTTTTGCACAATTTGCAGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR GCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGGGCTGCGGCTGCAGCTaGTGCTGCACATGTGGCATA | + |
Preference number: 4 (lower is better) Translates to: NWLISGYNSVLTTLKRNLGCGCS*CCTCGI Trigger: TATGCCACATGTGCAGCAGCAGCTGCAGCCGCAGCC...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACGGCAAGAGGCATCCTTaGCAACCACCTTTCGAAACA | + |
Preference number: 4 (lower is better) Translates to: ANAKQNTMCLQNWLISGYGKRHP*QPPFET Trigger: TGTTTCGAAAGGTGGTTGCCAAGGATGCCTCTTGCC...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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3UTR CAA 72 bp | CGGTTGAACTCTTCTGATCACTACTGCCTTCTACACTaGCAGTCAAAGCATGGTGTTTGTTTCTCCTGGAAC | + |
Preference number: 4 (lower is better) Translates to: RLNSSDHYCLLH*QSKHGVCFSWN Trigger: GTTCCAGGAGAAACAAACACCATGCTTTGACTGCAAGTGTAGAAGGCAGTAGTGATCAGAAGAGTTCAACCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR CAA 72 bp | GAGGTACAGCATCAGCAATGGGAAAAGTATCATTTGTaGATACATCTGCCTGTGTGCCATCCTCTCTCACCA | + |
Preference number: 4 (lower is better) Translates to: EVQHQQWEKYHL*IHLPVCHPLSP Trigger: TGGTGAGAGAGGATGGCACACAGGCAGATGTATCAACAAATGATACTTTTCCCATTGCTGATGCTGTACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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3UTR CAA 72 bp | GGAGAGGTACAGCATCAGCAATGGGAAAAGTATCATTaGTTGATACATCTGCCTGTGTGCCATCCTCTCTCA | + |
Preference number: 4 (lower is better) Translates to: GEVQHQQWEKYH*LIHLPVCHPLS Trigger: TGAGAGAGGATGGCACACAGGCAGATGTATCAACAAATGATACTTTTCCCATTGCTGATGCTGTACCTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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CDS-3UTR TCA 90 bp | CTCTCATGTAATATAAACAAATACCCAGGAGCACAGGCTCCTGTTTGGATTTTTGAAGTGCCACTTGGTTaGCTGGTCTTACATGGGCCA | + |
Preference number: 4 (lower is better) Translates to: LSCNINKYPGAQAPVWIFEVPLG*LVLHGP Trigger: TGGCCCATGTAAGACCAGTCAACCAAGTGGCACTTC...AAAAATCCAAACAGGAGCCTGTGCTCCTGGGTATTTGTTTATATTACATGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR TCA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACTGCAACACAGTAGCCTaGAGTAGCAGGAACCATTGT | + |
Preference number: 4 (lower is better) Translates to: ANAKQNTMCLQNWLISGYCNTVA*SSRNHC Trigger: ACAATGGTTCCTGCTACTTCAGGCTACTGTGTTGCA...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR GCA 90 bp | TTGCCCATTAGAGGGACGAGTTGTACATTCATTGCAATTTTCTTATTCATAACAGCCTTCTGGTGTACTTaGAGCACTGGAACAGGCGGC | + |
Preference number: 4 (lower is better) Translates to: LPIRGTSCTFIAIFLFITAFWCT*STGTGG Trigger: GCCGCCTGTTCCAGTGCTGCAAGTACACCAGAAGGC...TGTTATGAATAAGAAAATTGCAATGAATGTACAACTCGTCCCTCTAATGGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR TCA 90 bp | ATGGCCCTGAACTCAAGATACACCTGCTTCTGGCTCCCAAAGGTTAGAATTAAAAACATCCAGAGTGAATaGCTCAGTACGGAATGGTTT | + |
Preference number: 4 (lower is better) Translates to: MALNSRYTCFWLPKVRIKNIQSE*LSTEWF Trigger: AAACCATTCCGTACTGAGTCATTCACTCTGGATGTT...TTTAATTCTAACCTTTGGGAGCCAGAAGCAGGTGTATCTTGAGTTCAGGGCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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CDS-3UTR GCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGCCCCGAAGCATCTCCTaGTTCAAGAGTAGCAGGAGG | + |
Preference number: 4 (lower is better) Translates to: NWLISGYNSVLTTLKRNLPRSIS*FKSSRR Trigger: CCTCCTGCTACTCTTGAAGCAGGAGATGCTTCGGGG...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGAGTGAGACGAATCCCTaGGCATCCCATATCCCCGAC | + |
Preference number: 4 (lower is better) Translates to: NWLISGYNSVLTTLKRNLSETNP*ASHIPD Trigger: GTCGGGGATATGGGATGCCCAGGGATTCGTCTCACT...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
||
CDS-3UTR TCA 90 bp | GAAAAGTATCATTTGTTGATACATCTGCCTGTGTGCCATCCTCTCTCACCACATAACATCCAGAGTGAATaGCTCAGTACGGAATGGTTT | + |
Preference number: 4 (lower is better) Translates to: EKYHLLIHLPVCHPLSPHNIQSE*LSTEWF Trigger: AAACCATTCCGTACTGAGTCATTCACTCTGGATGTT...ATGTGGTGAGAGAGGATGGCACACAGGCAGATGTATCAACAAATGATACTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154827.8 |
||
CDS-3UTR TCA 90 bp | CTCTCATGTAATATAAACAAATACCCAGGAGCACAGGCTCCTGTTTGGATTTTTGGGAAACAGCATCTTTaGCGGACTTTCTGGAACCTT | + |
Preference number: 4 (lower is better) Translates to: LSCNINKYPGAQAPVWIFGKQHL*RTFWNL Trigger: AAGGTTCCAGAAAGTCCGTCAAAGATGCTGTTTCCC...AAAAATCCAAACAGGAGCCTGTGCTCCTGGGTATTTGTTTATATTACATGAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR TCA 90 bp | CTCTCATGTAATATAAACAAATACCCAGGAGCACAGGCTCCTGTTTGGATTTTTATGGGCCAGCGGAATTaGATGCCTTTCTGCAAATTC | + |
Preference number: 4 (lower is better) Translates to: LSCNINKYPGAQAPVWIFMGQRN*MPFCKF Trigger: GAATTTGCAGAAAGGCATTCAATTCCGCTGGCCCAT...AAAAATCCAAACAGGAGCCTGTGCTCCTGGGTATTTGTTTATATTACATGAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
||
CDS-3UTR TCA 90 bp | TTTACTGCAAATTGTGCAAAAGATACTATAATACTGTGCGGTAGGACAGTTATGCTGCACAGTTCGGTATaGCTGGAACTGGAACATGGC | + |
Preference number: 4 (lower is better) Translates to: FTANCAKDTIILCGRTVMLHSSV*LELEHG Trigger: GCCATGTTCCAGTTCCAGTCATACCGAACTGTGCAG...CATAACTGTCCTACCGCACAGTATTATAGTATCTTTTGCACAATTTGCAGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
||
CDS-3UTR GCA 90 bp | CAAGTACTTTACTCACTAAACAATTTCCCCAGCCCTTGTCTATTTTACAGGAACCTACCACAAGTGGTTTaGCTTTCTCCAGACTCTCCA | + |
Preference number: 4 (lower is better) Translates to: QVLYSLNNFPSPCLFYRNLPQVV*LSPDSP Trigger: TGGAGAGTCTGGAGAAAGGCAAACCACTTGTGGTAG...GTTCCTGTAAAATAGACAAGGGCTGGGGAAATTGTTTAGTGAGTAAAGTACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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CDS-3UTR GCA 90 bp | ATTCTCTGGAGCAAAACCATATTGGCATCCCTTATTCATGCAATGCATCTGACGGACAAGACAGGACCCTaGAGGTACAATAAAAGAGAT | + |
Preference number: 4 (lower is better) Translates to: ILWSKTILASLIHAMHLTDKTGP*RYNKRD Trigger: ATCTCTTTTATTGTACCTGCAGGGTCCTGTCTTGTC...CGTCAGATGCATTGCATGAATAAGGGATGCCAATATGGTTTTGCTCCAGAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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CDS-3UTR GCA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACACTGCCTTCTACACTTaGAGTCAAAGCATGGTGTTT | + |
Preference number: 4 (lower is better) Translates to: ANAKQNTMCLQNWLISGYTAFYT*SQSMVF Trigger: AAACACCATGCTTTGACTGCAAGTGTAGAAGGCAGT...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR GCA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACCTGAAGAGACAGGTTTaGTGTAGATACAGTTGTGGT | + |
Preference number: 4 (lower is better) Translates to: ANAKQNTMCLQNWLISGYLKRQV*CRYSCG Trigger: ACCACAACTGTATCTACAGCAAACCTGTCTCTTCAG...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR GCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGACCTGTTCTTGTTGTTaGTGCTGTTGTTGCGGCGGC | + |
Preference number: 4 (lower is better) Translates to: NWLISGYNSVLTTLKRNLTCSCC*CCCCGG Trigger: GCCGCCGCAACAACAGCAGCAACAACAAGAACAGGT...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | CTCTCATGTAATATAAACAAATACCCAGGAGCACAGGCTCCTGTTTGGATTTTTGGAAGAAGTGCCACTTaGTTGACTGGTCTTACATGG | + |
Preference number: 4 (lower is better) Translates to: LSCNINKYPGAQAPVWIFGRSAT*LTGLTW Trigger: CCATGTAAGACCAGTCAACCAAGTGGCACTTCTTCC...AAAAATCCAAACAGGAGCCTGTGCTCCTGGGTATTTGTTTATATTACATGAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACTCTTCCATTACGAATTaGTATGGCATTCCAGGAAGG | + |
Preference number: 4 (lower is better) Translates to: ANAKQNTMCLQNWLISGYSSITN*YGIPGR Trigger: CCTTCCTGGAATGCCATACCAATTCGTAATGGAAGA...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | CTCTCATGTAATATAAACAAATACCCAGGAGCACAGGCTCCTGTTTGGATTTTTTTGAGGCACAGAAGATaGTCCACTGTCCTGAAGAGA | + |
Preference number: 4 (lower is better) Translates to: LSCNINKYPGAQAPVWIFLRHRR*STVLKR Trigger: TCTCTTCAGGACAGTGGACCATCTTCTGTGCCTCAA...AAAAATCCAAACAGGAGCCTGTGCTCCTGGGTATTTGTTTATATTACATGAGAG 42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | CTCTCATGTAATATAAACAAATACCCAGGAGCACAGGCTCCTGTTTGGATTTTTACTGGAACTGGAACATaGCTTGCCCAAGAAACTGCA | + |
Preference number: 4 (lower is better) Translates to: LSCNINKYPGAQAPVWIFTGTGT*LAQETA Trigger: TGCAGTTTCTTGGGCAAGCCATGTTCCAGTTCCAGT...AAAAATCCAAACAGGAGCCTGTGCTCCTGGGTATTTGTTTATATTACATGAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
||
CDS-3UTR TCA 90 bp | TTTACTGCAAATTGTGCAAAAGATACTATAATACTGTGCGGTAGGACAGTTATGGATGGTCCACTGTCCTaGAGAGACAGGTTTGCTGTA | + |
Preference number: 4 (lower is better) Translates to: FTANCAKDTIILCGRTVMDGPLS*RDRFAV Trigger: TACAGCAAACCTGTCTCTTCAGGACAGTGGACCATC...CATAACTGTCCTACCGCACAGTATTATAGTATCTTTTGCACAATTTGCAGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR GCA 90 bp | TTGCCCATTAGAGGGACGAGTTGTACATTCATTGCAATTTTCTTATTCATAACACCAGGAAGGAAGAAGTaGCACTTGGTTGACTGGTCT | + |
Preference number: 4 (lower is better) Translates to: LPIRGTSCTFIAIFLFITPGRKK*HLVDWS Trigger: AGACCAGTCAACCAAGTGGCACTTCTTCCTTCCTGG...TGTTATGAATAAGAAAATTGCAATGAATGTACAACTCGTCCCTCTAATGGGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR GCA 90 bp | TTGCCCATTAGAGGGACGAGTTGTACATTCATTGCAATTTTCTTATTCATAACACGCAGAAGCACCACATaGTGCATTAACTGGATGCCA | + |
Preference number: 4 (lower is better) Translates to: LPIRGTSCTFIAIFLFITRRSTT*CINWMP Trigger: TGGCATCCAGTTAATGCAGCATGTGGTGCTTCTGCG...TGTTATGAATAAGAAAATTGCAATGAATGTACAACTCGTCCCTCTAATGGGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | CCAACCGTTCCAGATATTTCTCAAAAGATCCCTCCACATAAGACTCAAAAGCTTTACAACTACCACAAGTaGTTTGCCTTTCTCCAGACT | + |
Preference number: 4 (lower is better) Translates to: PTVPDISQKIPPHKTQKLYNYHK*FAFLQT Trigger: AGTCTGGAGAAAGGCAAACCACTTGTGGTAGTTGTA...AAGCTTTTGAGTCTTATGTGGAGGGATCTTTTGAGAAATATCTGGAACGGTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000145724.7 ENSMUST00000154827.8 |
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CDS-3UTR CCA 90 bp | TTTACTGCAAATTGTGCAAAAGATACTATAATACTGTGCGGTAGGACAGTTATGACTACCTTGTGCAGGTaGAGGTACAAAGCCAGGTTG | + |
Preference number: 4 (lower is better) Translates to: FTANCAKDTIILCGRTVMTTLCR*RYKARL Trigger: CAACCTGGCTTTGTACCTCCACCTGCACAAGGTAGT...CATAACTGTCCTACCGCACAGTATTATAGTATCTTTTGCACAATTTGCAGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR GCA 90 bp | TTTACTGCAAATTGTGCAAAAGATACTATAATACTGTGCGGTAGGACAGTTATGCTGTCCCTTGCTTATTaGCTTCTGGTGTACTTGCAG | + |
Preference number: 4 (lower is better) Translates to: FTANCAKDTIILCGRTVMLSLAY*LLVYLQ Trigger: CTGCAAGTACACCAGAAGGCAATAAGCAAGGGACAG...CATAACTGTCCTACCGCACAGTATTATAGTATCTTTTGCACAATTTGCAGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR GCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGTACTGGATAGTAGACTaGTCCATGAGGGAGAGGTAC | + |
Preference number: 4 (lower is better) Translates to: NWLISGYNSVLTTLKRNLYWIVD*SMRERY Trigger: GTACCTCTCCCTCATGGAGCAGTCTACTATCCAGTA...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | CTCTCATGTAATATAAACAAATACCCAGGAGCACAGGCTCCTGTTTGGATTTTTGCCTCCAGTTATAGTTaGATAACCTCTTCCATTACG | + |
Preference number: 4 (lower is better) Translates to: LSCNINKYPGAQAPVWIFASSYS*ITSSIT Trigger: CGTAATGGAAGAGGTTATCCAACTATAACTGGAGGC...AAAAATCCAAACAGGAGCCTGTGCTCCTGGGTATTTGTTTATATTACATGAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | CTCTCATGTAATATAAACAAATACCCAGGAGCACAGGCTCCTGTTTGGATTTTTCCTCCATTATCACAGTaGTCATTACTGTCTCCAGAA | + |
Preference number: 4 (lower is better) Translates to: LSCNINKYPGAQAPVWIFPPLSQ*SLLSPE Trigger: TTCTGGAGACAGTAATGACCACTGTGATAATGGAGG...AAAAATCCAAACAGGAGCCTGTGCTCCTGGGTATTTGTTTATATTACATGAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGACAGTTCGGTATGACTaGAACTGGAACATGGCTTGC | + |
Preference number: 4 (lower is better) Translates to: NWLISGYNSVLTTLKRNLTVRYD*NWNMAC Trigger: GCAAGCCATGTTCCAGTTCCAGTCATACCGAACTGT...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR TCA 90 bp | ATACAAGTACTTTACTCACTAAACAATTTCCCCAGCCCTTGTCTATTTTACAGGTGTAAACATCCAGAGTaGATGACTCAGTACGGAATG | + |
Preference number: 4 (lower is better) Translates to: IQVLYSLNNFPSPCLFYRCKHPE*MTQYGM Trigger: CATTCCGTACTGAGTCATTCACTCTGGATGTTTACA...CCTGTAAAATAGACAAGGGCTGGGGAAATTGTTTAGTGAGTAAAGTACTTGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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CDS-3UTR TCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGCAAAGCCATTATCTGTaGCTTGAGTTGGTGGCTTTC | + |
Preference number: 4 (lower is better) Translates to: NWLISGYNSVLTTLKRNLQSHYL*LELVAF Trigger: GAAAGCCACCAACTCAAGTCACAGATAATGGCTTTG...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR TCA 90 bp | TTGCCCATTAGAGGGACGAGTTGTACATTCATTGCAATTTTCTTATTCATAACATCGGTTGAACTCTTCTaGTCACTACTGCCTTCTACA | + |
Preference number: 4 (lower is better) Translates to: LPIRGTSCTFIAIFLFITSVELF*SLLPST Trigger: TGTAGAAGGCAGTAGTGATCAGAAGAGTTCAACCGA...TGTTATGAATAAGAAAATTGCAATGAATGTACAACTCGTCCCTCTAATGGGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR GCA 90 bp | TTGCCCATTAGAGGGACGAGTTGTACATTCATTGCAATTTTCTTATTCATAACACATGACCATAATGCATaGTGTGCTGAATCCTGGATG | + |
Preference number: 4 (lower is better) Translates to: LPIRGTSCTFIAIFLFITHDHNA*CAESWM Trigger: CATCCAGGATTCAGCACAGCATGCATTATGGTCATG...TGTTATGAATAAGAAAATTGCAATGAATGTACAACTCGTCCCTCTAATGGGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR GCA 90 bp | TTGCCCATTAGAGGGACGAGTTGTACATTCATTGCAATTTTCTTATTCATAACAAACTGGAACATGGCTTaGCCAAGAAACTGCAATTGC | + |
Preference number: 4 (lower is better) Translates to: LPIRGTSCTFIAIFLFITNWNMA*PRNCNC Trigger: GCAATTGCAGTTTCTTGGGCAAGCCATGTTCCAGTT...TGTTATGAATAAGAAAATTGCAATGAATGTACAACTCGTCCCTCTAATGGGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | ATACAAGTACTTTACTCACTAAACAATTTCCCCAGCCCTTGTCTATTTTACAGGTGCAGAAAATTTTTCTaGCTGGCCAGGAGGATAACA | + |
Preference number: 4 (lower is better) Translates to: IQVLYSLNNFPSPCLFYRCRKFF*LARRIT Trigger: TGTTATCCTCCTGGCCAGCCAGAAAAATTTTCTGCA...CCTGTAAAATAGACAAGGGCTGGGGAAATTGTTTAGTGAGTAAAGTACTTGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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CDS-3UTR CCA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACGACTCAAAAGCTTGTTaGTTTTCCTTCATATATGAG | + |
Preference number: 4 (lower is better) Translates to: ANAKQNTMCLQNWLISGYDSKAC*FSFIYE Trigger: CTCATATATGAAGGAAAACCAACAAGCTTTTGAGTC...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | TTTACTGCAAATTGTGCAAAAGATACTATAATACTGTGCGGTAGGACAGTTATGGGGATCTGTCATTACTaGATAGTAGACTGCTCCATG | + |
Preference number: 4 (lower is better) Translates to: FTANCAKDTIILCGRTVMGICHY*IVDCSM Trigger: CATGGAGCAGTCTACTATCCAGTAATGACAGATCCC...CATAACTGTCCTACCGCACAGTATTATAGTATCTTTTGCACAATTTGCAGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR TCA 90 bp | ATAAAAGAGATGGCCTTCTTTGTGCAACTGCTTTGCCAATTCAAATTGATGATTTGTAAACATCCAGAGTaGATGACTCAGTACGGAATG | + |
Preference number: 4 (lower is better) Translates to: IKEMAFFVQLLCQFKLMICKHPE*MTQYGM Trigger: CATTCCGTACTGAGTCATTCACTCTGGATGTTTACA...AATCATCAATTTGAATTGGCAAAGCAGTTGCACAAAGAAGGCCATCTCTTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145724.7 |
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CDS-3UTR GCA 90 bp | CTCTCATGTAATATAAACAAATACCCAGGAGCACAGGCTCCTGTTTGGATTTTTGAAACAGCCCTAAACTaGCTAAATATTCATCCATTG | + |
Preference number: 4 (lower is better) Translates to: LSCNINKYPGAQAPVWIFETALN*LNIHPL Trigger: CAATGGATGAATATTTAGGCAGTTTAGGGCTGTTTC...AAAAATCCAAACAGGAGCCTGTGCTCCTGGGTATTTGTTTATATTACATGAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR GCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGAATTCAAAGGTGGTTTaGATGAGTTATAGCCCTGCC | + |
Preference number: 4 (lower is better) Translates to: NWLISGYNSVLTTLKRNLNSKVV*MSYSPA Trigger: GGCAGGGCTATAACTCATGCAAACCACCTTTGAATT...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR GCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGGCTTGCCCAAGAAACTaGAATTGCTGCAGAATTTTC | + |
Preference number: 4 (lower is better) Translates to: NWLISGYNSVLTTLKRNLACPRN*NCCRIF Trigger: GAAAATTCTGCAGCAATTGCAGTTTCTTGGGCAAGC...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR GCA 90 bp | TTGCCCATTAGAGGGACGAGTTGTACATTCATTGCAATTTTCTTATTCATAACAGCTGCATTAACTGGATaGCACATAGCAATACTGGAA | + |
Preference number: 4 (lower is better) Translates to: LPIRGTSCTFIAIFLFITAALTG*HIAILE Trigger: TTCCAGTATTGCTATGTGGCATCCAGTTAATGCAGC...TGTTATGAATAAGAAAATTGCAATGAATGTACAACTCGTCCCTCTAATGGGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | TTTACTGCAAATTGTGCAAAAGATACTATAATACTGTGCGGTAGGACAGTTATGTTCCACTCCATTCTCTaGAGCAAAACCATATTGGCA | + |
Preference number: 4 (lower is better) Translates to: FTANCAKDTIILCGRTVMFHSIL*SKTILA Trigger: TGCCAATATGGTTTTGCTCCAGAGAATGGAGTGGAA...CATAACTGTCCTACCGCACAGTATTATAGTATCTTTTGCACAATTTGCAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR TCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGTTGTATGGCATTCTGTaGAGAAATATCAGAGGTACG | + |
Preference number: 4 (lower is better) Translates to: NWLISGYNSVLTTLKRNLLYGIL*RNIRGT Trigger: CGTACCTCTGATATTTCTTCACAGAATGCCATACAA...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR TCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGAAAAGTATCATTTGTTaGTACATCTGCCTGTGTGCC | + |
Preference number: 4 (lower is better) Translates to: NWLISGYNSVLTTLKRNLKSIIC*YICLCA Trigger: GGCACACAGGCAGATGTATCAACAAATGATACTTTT...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGATTTCGATAGATTTCTaGATCCAGAGCTTTCAGCAC | + |
Preference number: 4 (lower is better) Translates to: NWLISGYNSVLTTLKRNLISIDF*IQSFQH Trigger: GTGCTGAAAGCTCTGGATCCAGAAATCTATCGAAAT...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGCATTACGAATTGGTATaGCATTCCAGGAAGGAAGAA | + |
Preference number: 4 (lower is better) Translates to: NWLISGYNSVLTTLKRNLHYELV*HSRKEE Trigger: TTCTTCCTTCCTGGAATGCCATACCAATTCGTAATG...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | TTGCCCATTAGAGGGACGAGTTGTACATTCATTGCAATTTTCTTATTCATAACAAAAACTTTTGTATCTTaGGGCAGATCACTTCCACTC | + |
Preference number: 4 (lower is better) Translates to: LPIRGTSCTFIAIFLFITKTFVS*GRSLPL Trigger: GAGTGGAAGTGATCTGCCCCAAGATACAAAAGTTTT...TGTTATGAATAAGAAAATTGCAATGAATGTACAACTCGTCCCTCTAATGGGCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR TCA 90 bp | TTGCCCATTAGAGGGACGAGTTGTACATTCATTGCAATTTTCTTATTCATAACAATAATATTTTCCACCTaGTTCCATGCAAACCTGACA | + |
Preference number: 4 (lower is better) Translates to: LPIRGTSCTFIAIFLFITIIFST*FHANLT Trigger: TGTCAGGTTTGCATGGAATCAGGTGGAAAATATTAT...TGTTATGAATAAGAAAATTGCAATGAATGTACAACTCGTCCCTCTAATGGGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR TCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGACCTTGTCTTTGAGATaGATGTTGAGGGTAAAAATG | + |
Preference number: 4 (lower is better) Translates to: NWLISGYNSVLTTLKRNLTLSLR*MLRVKM Trigger: CATTTTTACCCTCAACATTCATCTCAAAGACAAGGT...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGCCCAACTTTAGGATTTaGCAAGTTTTGCTTGCTTAT | + |
Preference number: 4 (lower is better) Translates to: NWLISGYNSVLTTLKRNLPNFRI*QVLLAY Trigger: ATAAGCAAGCAAAACTTGCCAAATCCTAAAGTTGGG...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGCAAAGCCAGGTTGTATaGCATTCTGTGAAGAAATAT | + |
Preference number: 4 (lower is better) Translates to: NWLISGYNSVLTTLKRNLQSQVV*HSVKKY Trigger: ATATTTCTTCACAGAATGCCATACAACCTGGCTTTG...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CCA 90 bp | TTGCCCATTAGAGGGACGAGTTGTACATTCATTGCAATTTTCTTATTCATAACAGTACAGCATCAGCAATaGGAAAAGTATCATTTGTTG | + |
Preference number: 4 (lower is better) Translates to: LPIRGTSCTFIAIFLFITVQHQQ*EKYHLL Trigger: CAACAAATGATACTTTTCCCATTGCTGATGCTGTAC...TGTTATGAATAAGAAAATTGCAATGAATGTACAACTCGTCCCTCTAATGGGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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3UTR CAA 72 bp | ACAAGTACTTTACTCACTAAACAATTTCCCCAGCCCTaGTCTATTTTACAGGAACAAATATTACCAGGAATG | + |
Preference number: 4 (lower is better) Translates to: TSTLLTKQFPQP*SILQEQILPGM Trigger: CATTCCTGGTAATATTTGTTCCTGTAAAATAGACAAGGGCTGGGGAAATTGTTTAGTGAGTAAAGTACTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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3UTR CAA 72 bp | GAGAATAATCTTGTCTTCAAAGCCATTATCTGTGACTaGAGTTGGTGGCTTTCCAGGATAACGATAAATAAT | + |
Preference number: 4 (lower is better) Translates to: ENNLVFKAIICD*SWWLSRITINN Trigger: ATTATTTATCGTTATCCTGGAAAGCCACCAACTCAAGTCACAGATAATGGCTTTGAAGACAAGATTATTCTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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3UTR CAA 72 bp | TCCTATAGTGAGCTATATCCTTACTTTTTACCTTGCTaGGTAACAGGTATTTTTACCATTCACTGTTGTGAA | + |
Preference number: 4 (lower is better) Translates to: SYSELYPYFLPC*VTGIFTIHCCE Trigger: TTCACAACAGTGAATGGTAAAAATACCTGTTACCAAGCAAGGTAAAAAGTAAGGATATAGCTCACTATAGGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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CDS GCA 90 bp | ACCCAGACTCTCGAGGATCTGAACGCAGTCGTTAGCGACCACCCGTaGGACGAGCTCGTCGAAACTGGTGGTCCCGACAGTCACAAACGC | + |
Preference number: 5 (lower is better) Translates to: TQTLEDLNAVVSDHP*DELVETGGPDSHKR Trigger: GCGTTTGTGACTGTCGGGACCACCAGTTTCGACGAGCTCGTCGCACGGGTGGTCGCTAACGACTGCGTTCAGATCCTCGAGAGTCTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070801.11 ENSMUST00000145724.7 ENSMUST00000154827.8 |
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CDS-3UTR CAA 90 bp | TTTAACATGCTGGCTACCAGGAAGCTGGCTCCAATGAACTTGCCCATTAGAGGGTGGCCAGCACTCTCCTaGGGATCTCCCAACCGTTCC | + |
Preference number: 5 (lower is better) Translates to: FNMLATRKLAPMNLPIRGWPALS*GSPNRS Trigger: GGAACGGTTGGGAGATCCCAAGGAGAGTGCTGGCCA...CCCTCTAATGGGCAAGTTCATTGGAGCCAGCTTCCTGGTAGCCAGCATGTTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198039.5 ENSMUST00000238864.2 |
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CDS-3UTR CAA 90 bp | TTTAACATGCTGGCTACCAGGAAGCTGGCTCCAATGAACTTGCCCATTAGAGGGAGGCAAGAGGCATCCTaGGCAACCACCTTTCGAAAC | + |
Preference number: 5 (lower is better) Translates to: FNMLATRKLAPMNLPIRGRQEAS*ATTFRN Trigger: GTTTCGAAAGGTGGTTGCCAAGGATGCCTCTTGCCT...CCCTCTAATGGGCAAGTTCATTGGAGCCAGCTTCCTGGTAGCCAGCATGTTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS GCA 90 bp | TACCACAAGTGGTTTGCCTTTCTCCAGACTCTCCAAACAGCTTCCTaGACCTGCGTGGCTAATGACAAGATCAGCTTGCTGAAGGTCTTC | + |
Preference number: 5 (lower is better) Translates to: YHKWFAFLQTLQTAS*TCVANDKISLLKVF Trigger: GAAGACCTTCAGCAAGCTGATCTTGTCATTAGCCACGCAGGTGCAGGAAGCTGTTTGGAGAGTCTGGAGAAAGGCAAACCACTTGTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070801.11 ENSMUST00000154827.8 |
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CDS-3UTR CAA 90 bp | AATCAAATCCCAACAAAGGAGACCCATAGGGATCTGTCATTACTGGATAGTAGATGGCCAGCACTCTCCTaGGGATCTCCCAACCGTTCC | + |
Preference number: 5 (lower is better) Translates to: NQIPTKETHRDLSLLDSRWPALS*GSPNRS Trigger: GGAACGGTTGGGAGATCCCAAGGAGAGTGCTGGCCA...TCTACTATCCAGTAATGACAGATCCCTATGGGTCTCCTTTGTTGGGATTTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198039.5 |
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CDS-3UTR CAA 90 bp | TTTAACATGCTGGCTACCAGGAAGCTGGCTCCAATGAACTTGCCCATTAGAGGGTTGGTCTACGAGGGGTaGCTCAGTACAATCTGGATA | + |
Preference number: 5 (lower is better) Translates to: FNMLATRKLAPMNLPIRGLVYEG*LSTIWI Trigger: TATCCAGATTGTACTGAGCAACCCCTCGTAGACCAA...CCCTCTAATGGGCAAGTTCATTGGAGCCAGCTTCCTGGTAGCCAGCATGTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CAA 90 bp | CTGCGCAGAAGCACCACATGCTGCATTAACTGGATGCCACATAGCAATACTGGAAAGAGATGGCCTTCTTaGTGCAACTGCTTTGCCAAT | + |
Preference number: 5 (lower is better) Translates to: LRRSTTCCINWMPHSNTGKRWPS*CNCFAN Trigger: ATTGGCAAAGCAGTTGCACAAAGAAGGCCATCTCTT...TCCAGTATTGCTATGTGGCATCCAGTTAATGCAGCATGTGGTGCTTCTGCGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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CDS-3UTR CAA 90 bp | GCATCCTTGGCAACCACCTTTCGAAACAGCCCTAAACTGCCTAAATATTCATCCAGTTGCTGCAGAATCTaGGCACTTCCCAGAAGCACA | + |
Preference number: 5 (lower is better) Translates to: ASLATTFRNSPKLPKYSSSCCRI*ALPRST Trigger: TGTGCTTCTGGGAAGTGCCAAGATTCTGCAGCAACT...GGATGAATATTTAGGCAGTTTAGGGCTGTTTCGAAAGGTGGTTGCCAAGGATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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CDS-3UTR CAA 90 bp | TTTAACATGCTGGCTACCAGGAAGCTGGCTCCAATGAACTTGCCCATTAGAGGGACTTTCTGGAACCTTTaGTCTTTCTGTCCCTTGCTT | + |
Preference number: 5 (lower is better) Translates to: FNMLATRKLAPMNLPIRGTFWNL*SFCPLL Trigger: AAGCAAGGGACAGAAAGACAAAAGGTTCCAGAAAGT...CCCTCTAATGGGCAAGTTCATTGGAGCCAGCTTCCTGGTAGCCAGCATGTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CAA 90 bp | TTTAACATGCTGGCTACCAGGAAGCTGGCTCCAATGAACTTGCCCATTAGAGGGTGGAGCAAAACCATATaGGCATCCCTTATTCATGCA | + |
Preference number: 5 (lower is better) Translates to: FNMLATRKLAPMNLPIRGWSKTI*ASLIHA Trigger: TGCATGAATAAGGGATGCCAATATGGTTTTGCTCCA...CCCTCTAATGGGCAAGTTCATTGGAGCCAGCTTCCTGGTAGCCAGCATGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS TCA 90 bp | GTCTTCTTTCAAAGAATCCTTATACCTGTAAACATCCAGAGTGAATaGCTCAGTACGGAATGGTTTGGGCACCACAGTGCCTCTACCAAC | + |
Preference number: 5 (lower is better) Translates to: VFFQRILIPVNIQSE*LSTEWFGHHSASTN Trigger: GTTGGTAGAGGCACTGTGGTGCCCAAACCATTCCGTACTGAGTCATTCACTCTGGATGTTTACAGGTATAAGGATTCTTTGAAAGAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070801.11 ENSMUST00000154827.8 |
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CDS GCA 90 bp | GATGATTGTTCATTAACTTTTCATTTACAACTACCACAAGTGGTTTaGCTTTCTCCAGACTCTCCAAACAGCTTCCTGCACCTGCGTGGC | + |
Preference number: 5 (lower is better) Translates to: DDCSLTFHLQLPQVV*LSPDSPNSFLHLRG Trigger: GCCACGCAGGTGCAGGAAGCTGTTTGGAGAGTCTGGAGAAAGGCAAACCACTTGTGGTAGTTGTAAATGAAAAGTTAATGAACAATCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070801.11 ENSMUST00000154827.8 |
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CDS GCA 90 bp | TCAGTGTTGATAAATCCATTGACTGTAACAGCCCAGGAAGCGTGCTaGAGGTACAATAAAAGAGATGGCCTTCTTTGTGCAACTGCTTTG | + |
Preference number: 5 (lower is better) Translates to: SVLINPLTVTAQEAC*RYNKRDGLLCATAL Trigger: CAAAGCAGTTGCACAAAGAAGGCCATCTCTTTTATTGTACCTGCAGCACGCTTCCTGGGCTGTTACAGTCAATGGATTTATCAACACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070801.11 ENSMUST00000123710.8 ENSMUST00000149330.8 |
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CDS-3UTR CAA 90 bp | AGTATAGTAGAGGGTCATGACCATAATGCATGCTGTGCTGAATCCTGGATGGAAAAGAGATGGCCTTCTTaGTGCAACTGCTTTGCCAAT | + |
Preference number: 5 (lower is better) Translates to: SIVEGHDHNACCAESWMEKRWPS*CNCFAN Trigger: ATTGGCAAAGCAGTTGCACAAAGAAGGCCATCTCTT...TTCCATCCAGGATTCAGCACAGCATGCATTATGGTCATGACCCTCTACTATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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CDS-3UTR CAA 90 bp | AATAATCTTGTCTTCAAAGCCATTATCTGTGACTTGAGTTGGTGGCTTTCCAGGAGTTGCTGCAGAATCTaGGCACTTCCCAGAAGCACA | + |
Preference number: 5 (lower is better) Translates to: NNLVFKAIICDLSWWLSRSCCRI*ALPRST Trigger: TGTGCTTCTGGGAAGTGCCAAGATTCTGCAGCAACT...CCTGGAAAGCCACCAACTCAAGTCACAGATAATGGCTTTGAAGACAAGATTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 |
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CDS-3UTR CAA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACCATGGGCCAGCGGAATaGAATGCCTTTCTGCAAATT | + |
Preference number: 5 (lower is better) Translates to: ANAKQNTMCLQNWLISGYHGPAE*NAFLQI Trigger: AATTTGCAGAAAGGCATTCAATTCCGCTGGCCCATG...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS GCA 90 bp | TCTCCCAACCGTTCCAGATATTTCTCAAAAGATCCCTCCACATACTaGAGGTACAATAAAAGAGATGGCCTTCTTTGTGCAACTGCTTTG | + |
Preference number: 5 (lower is better) Translates to: SPNRSRYFSKDPSTY*RYNKRDGLLCATAL Trigger: CAAAGCAGTTGCACAAAGAAGGCCATCTCTTTTATTGTACCTGCAGTATGTGGAGGGATCTTTTGAGAAATATCTGGAACGGTTGGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198039.5 |
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CDS-3UTR CAA 90 bp | CTACCTTGTGCAGGTGGAGGTACAAAGCCAGGTTGTATGGCATTCTGTGAAGAACTTTGTGCAACTGCTTaGCCAATTCAAATTGATGAT | + |
Preference number: 5 (lower is better) Translates to: LPCAGGGTKPGCMAFCEELCATA*PIQIDD Trigger: ATCATCAATTTGAATTGGCAAAGCAGTTGCACAAAG...TTCTTCACAGAATGCCATACAACCTGGCTTTGTACCTCCACCTGCACAAGGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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CDS-3UTR CAA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACTACTGCCTTCTACACTaGCAGTCAAAGCATGGTGTT | + |
Preference number: 5 (lower is better) Translates to: ANAKQNTMCLQNWLISGYYCLLH*QSKHGV Trigger: AACACCATGCTTTGACTGCAAGTGTAGAAGGCAGTA...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CAA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACCTCTTCCATTACGAATaGGTATGGCATTCCAGGAAG | + |
Preference number: 5 (lower is better) Translates to: ANAKQNTMCLQNWLISGYLFHYE*VWHSRK Trigger: CTTCCTGGAATGCCATACCAATTCGTAATGGAAGAG...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CAA 90 bp | GCATCAGCAATGGGAAAAGTATCATTTGTTGATACATCTGCCTGTGTGCCATCCAATGACAAGATCAGCTaGCTGAAGGTCTTCTTTCAA | + |
Preference number: 5 (lower is better) Translates to: ASAMGKVSFVDTSACVPSNDKIS*LKVFFQ Trigger: TTGAAAGAAGACCTTCAGCAAGCTGATCTTGTCATT...GGATGGCACACAGGCAGATGTATCAACAAATGATACTTTTCCCATTGCTGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154827.8 |
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CDS-3UTR CAA 90 bp | TTTACTGCAAATTGTGCAAAAGATACTATAATACTGTGCGGTAGGACAGTTATGAACCTGTTCTTGTTGTaGCTGCTGTTGTTGCGGCGG | + |
Preference number: 5 (lower is better) Translates to: FTANCAKDTIILCGRTVMNLFLL*LLLLRR Trigger: CCGCCGCAACAACAGCAGCAACAACAAGAACAGGTT...CATAACTGTCCTACCGCACAGTATTATAGTATCTTTTGCACAATTTGCAGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CAA 90 bp | AGTATAGTAGAGGGTCATGACCATAATGCATGCTGTGCTGAATCCTGGATGGAACTTTGTGCAACTGCTTaGCCAATTCAAATTGATGAT | + |
Preference number: 5 (lower is better) Translates to: SIVEGHDHNACCAESWMELCATA*PIQIDD Trigger: ATCATCAATTTGAATTGGCAAAGCAGTTGCACAAAG...TTCCATCCAGGATTCAGCACAGCATGCATTATGGTCATGACCCTCTACTATACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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CDS-3UTR CAA 90 bp | AACTGGTTAATATCAGGCTACAATTCAGTTCTGACGACTCTTAAAAGAAATCTGGCCATTATCTGTGACTaGAGTTGGTGGCTTTCCAGG | + |
Preference number: 5 (lower is better) Translates to: NWLISGYNSVLTTLKRNLAIICD*SWWLSR Trigger: CCTGGAAAGCCACCAACTCAAGTCACAGATAATGGC...CAGATTTCTTTTAAGAGTCGTCAGAACTGAATTGTAGCCTGATATTAACCAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CAA 90 bp | CTTCCAGGGAATTCTATCTACATCTTCCAATATCATCATAGGCACAAGGATTTAAAGAGATGGCCTTCTTaGTGCAACTGCTTTGCCAAT | + |
Preference number: 5 (lower is better) Translates to: LPGNSIYIFQYHHRHKDLKRWPS*CNCFAN Trigger: ATTGGCAAAGCAGTTGCACAAAGAAGGCCATCTCTT...TAAATCCTTGTGCCTATGATGATATTGGAAGATGTAGATAGAATTCCCTGGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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CDS-3UTR CAA 90 bp | ATCTGTCATAACTATTTCAGGGAAATAGCCTCCAGTTATAGTTGGATAACCTCTAAGAGATGGCCTTCTTaGTGCAACTGCTTTGCCAAT | + |
Preference number: 5 (lower is better) Translates to: ICHNYFREIASSYSWITSKRWPS*CNCFAN Trigger: ATTGGCAAAGCAGTTGCACAAAGAAGGCCATCTCTT...AGAGGTTATCCAACTATAACTGGAGGCTATTTCCCTGAAATAGTTATGACAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000154827.8 ENSMUST00000197316.5 ENSMUST00000198039.5 |
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CDS-3UTR CAA 90 bp | TTTACTGCAAATTGTGCAAAAGATACTATAATACTGTGCGGTAGGACAGTTATGAGGGAAACAGCATCTTaGACGGACTTTCTGGAACCT | + |
Preference number: 5 (lower is better) Translates to: FTANCAKDTIILCGRTVMRETAS*TDFLEP Trigger: AGGTTCCAGAAAGTCCGTCAAAGATGCTGTTTCCCT...CATAACTGTCCTACCGCACAGTATTATAGTATCTTTTGCACAATTTGCAGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CAA 90 bp | GCAAATGCAAAGCAGAACACCATGTGCCTTCAAAACTGGTTAATATCAGGCTACCCCAAGAAACTGCAATaGCTGCAGAATTTTCTAATA | + |
Preference number: 5 (lower is better) Translates to: ANAKQNTMCLQNWLISGYPKKLQ*LQNFLI Trigger: TATTAGAAAATTCTGCAGCAATTGCAGTTTCTTGGG...GTAGCCTGATATTAACCAGTTTTGAAGGCACATGGTGTTCTGCTTTGCATTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CAA 90 bp | TTTACTGCAAATTGTGCAAAAGATACTATAATACTGTGCGGTAGGACAGTTATGGAACTGGAACATGGCTaGCCCAAGAAACTGCAATTG | + |
Preference number: 5 (lower is better) Translates to: FTANCAKDTIILCGRTVMELEHG*PKKLQL Trigger: CAATTGCAGTTTCTTGGGCAAGCCATGTTCCAGTTC...CATAACTGTCCTACCGCACAGTATTATAGTATCTTTTGCACAATTTGCAGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CAA 90 bp | CAAGTACTTTACTCACTAAACAATTTCCCCAGCCCTTGTCTATTTTACAGGAACAATGACAAGATCAGCTaGCTGAAGGTCTTCTTTCAA | + |
Preference number: 5 (lower is better) Translates to: QVLYSLNNFPSPCLFYRNNDKIS*LKVFFQ Trigger: TTGAAAGAAGACCTTCAGCAAGCTGATCTTGTCATT...GTTCCTGTAAAATAGACAAGGGCTGGGGAAATTGTTTAGTGAGTAAAGTACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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CDS-3UTR CAA 90 bp | TCACATTCTACCTATATATCTCCATGTACTCATGTGAATATAGCCATGGATCCTGTGTTGATAAATCCATaGACTGTAACAGCCCAGGAA | + |
Preference number: 5 (lower is better) Translates to: SHSTYISPCTHVNIAMDPVLINP*TVTAQE Trigger: TTCCTGGGCTGTTACAGTCAATGGATTTATCAACAC...AGGATCCATGGCTATATTCACATGAGTACATGGAGATATATAGGTAGAATGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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CDS-3UTR CAA 90 bp | TTTACTGCAAATTGTGCAAAAGATACTATAATACTGTGCGGTAGGACAGTTATGTCCATGAACCTGTTCTaGTTGTTGCTGCTGTTGTTG | + |
Preference number: 5 (lower is better) Translates to: FTANCAKDTIILCGRTVMSMNLF*LLLLLL Trigger: CAACAACAGCAGCAACAACAAGAACAGGTTCATGGA...CATAACTGTCCTACCGCACAGTATTATAGTATCTTTTGCACAATTTGCAGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CAA 90 bp | TTGCCCATTAGAGGGACGAGTTGTACATTCATTGCAATTTTCTTATTCATAACATTGAGGGTAAAAATGTaGACTAGACAGAATATGGCC | + |
Preference number: 5 (lower is better) Translates to: LPIRGTSCTFIAIFLFITLRVKM*TRQNMA Trigger: GGCCATATTCTGTCTAGTCAACATTTTTACCCTCAA...TGTTATGAATAAGAAAATTGCAATGAATGTACAACTCGTCCCTCTAATGGGCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CAA 90 bp | TTTACTGCAAATTGTGCAAAAGATACTATAATACTGTGCGGTAGGACAGTTATGGAAAAGTATCATTTGTaGATACATCTGCCTGTGTGC | + |
Preference number: 5 (lower is better) Translates to: FTANCAKDTIILCGRTVMEKYHL*IHLPVC Trigger: GCACACAGGCAGATGTATCAACAAATGATACTTTTC...CATAACTGTCCTACCGCACAGTATTATAGTATCTTTTGCACAATTTGCAGTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CAA 90 bp | TTTACTGCAAATTGTGCAAAAGATACTATAATACTGTGCGGTAGGACAGTTATGTGGGAAAAGTATCATTaGTTGATACATCTGCCTGTG | + |
Preference number: 5 (lower is better) Translates to: FTANCAKDTIILCGRTVMWEKYH*LIHLPV Trigger: CACAGGCAGATGTATCAACAAATGATACTTTTCCCA...CATAACTGTCCTACCGCACAGTATTATAGTATCTTTTGCACAATTTGCAGTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS-3UTR CAA 90 bp | CATTCTACCTATATATCTCCATGTACTCATGTGAATATAGCCATGGATCCTATACTTTGTGCAACTGCTTaGCCAATTCAAATTGATGAT | + |
Preference number: 5 (lower is better) Translates to: HSTYISPCTHVNIAMDPILCATA*PIQIDD Trigger: ATCATCAATTTGAATTGGCAAAGCAGTTGCACAAAG...TATAGGATCCATGGCTATATTCACATGAGTACATGGAGATATATAGGTAGAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070801.11 |
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CDS-3UTR CAA 90 bp | TTTACTGCAAATTGTGCAAAAGATACTATAATACTGTGCGGTAGGACAGTTATGGAACATCTTCTTTCGTaGCTTCATGTTCATATCTGT | + |
Preference number: 5 (lower is better) Translates to: FTANCAKDTIILCGRTVMEHLLS*LHVHIC Trigger: ACAGATATGAACATGAAGCAACGAAAGAAGATGTTC...CATAACTGTCCTACCGCACAGTATTATAGTATCTTTTGCACAATTTGCAGTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238864.2 |
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CDS CAA 72 bp | ACGGAATGGTTTGGGCACCACAGTGCCTCTACCAACTaGGAGGACAAGATGGTTGTAACCCAGACTCTCGAG | + |
Preference number: 6 (lower is better) Translates to: TEWFGHHSASTN*EDKMVVTQTLE Trigger: CTCGAGAGTCTGGGTTACAACCATCTTGTCCTCCAAGTTGGTAGAGGCACTGTGGTGCCCAAACCATTCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070801.11 ENSMUST00000145724.7 ENSMUST00000154827.8 |
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CDS TCA 72 bp | AAACAGCTTCCTGCACCTGTAAACATCCAGAGTGAATaGCTCAGTACGGAATGGTTTGGGCACCACAGTGCC | + |
Preference number: 6 (lower is better) Translates to: KQLPAPVNIQSE*LSTEWFGHHSA Trigger: GGCACTGTGGTGCCCAAACCATTCCGTACTGAGTCATTCACTCTGGATGTTTACAGGTGCAGGAAGCTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145724.7 |
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CDS CAA 90 bp | ATGCAGAAAATTTTTCTGGCTGGCCAGGAGGATAACATTTCAGTGTaGATAAATCCATTGACTGTAACAGCCCAGGAAGCGTGCTGCAGG | + |
Preference number: 6 (lower is better) Translates to: MQKIFLAGQEDNISV*INPLTVTAQEACCR Trigger: CCTGCAGCACGCTTCCTGGGCTGTTACAGTCAATGGATTTATCAACACTGAAATGTTATCCTCCTGGCCAGCCAGAAAAATTTTCTGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070801.11 ENSMUST00000123710.8 ENSMUST00000149330.8 |
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CDS CAA 90 bp | TTTCTGGCTGGCCAGGAGGATAACATTTCAGTGTTGATAAATCCATaGACTGTAACAGCCCAGGAAGCGTGCTGCAGGTACAATAAAAGA | + |
Preference number: 6 (lower is better) Translates to: FLAGQEDNISVLINP*TVTAQEACCRYNKR Trigger: TCTTTTATTGTACCTGCAGCACGCTTCCTGGGCTGTTACAGTCAATGGATTTATCAACACTGAAATGTTATCCTCCTGGCCAGCCAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070801.11 ENSMUST00000123710.8 ENSMUST00000149330.8 |
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CDS GCA 72 bp | ATAAATCCATTGACTGTAACAGCCCAGGAAGCGTGCTaGAGGTACAATAAAAGAGATGGCCTTCTTTGTGCA | + |
Preference number: 6 (lower is better) Translates to: INPLTVTAQEAC*RYNKRDGLLCA Trigger: TGCACAAAGAAGGCCATCTCTTTTATTGTACCTGCAGCACGCTTCCTGGGCTGTTACAGTCAATGGATTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070801.11 ENSMUST00000123710.8 ENSMUST00000149330.8 |
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CDS GCA 72 bp | TCATTAACTTTTCATTTACAACTACCACAAGTGGTTTaGCTTTCTCCAGACTCTCCAAACAGCTTCCTGCAC | + |
Preference number: 6 (lower is better) Translates to: SLTFHLQLPQVV*LSPDSPNSFLH Trigger: GTGCAGGAAGCTGTTTGGAGAGTCTGGAGAAAGGCAAACCACTTGTGGTAGTTGTAAATGAAAAGTTAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070801.11 ENSMUST00000154827.8 |