Pregenerated sensors for ALG12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035845Ensembl transcript IDs: ENSMUST00000043087.15, ENSMUST00000159328.2, ENSMUST00000162183.8
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCTCGGGCTATAACAGCTGCCATGATTGGTGGTGGAGGAGGTGGTaGTGGTGGTGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: ASGYNSCHDWWWRRW*WWWWWWCVCVSVCP Trigger: GGGACAGACAGACACACACACACACCACCACCACCACCACCACCACCACCTCCTCCACCACCAATCATGGCAGCTGTTATAGCCCGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR CCA 90 bp | AACAGCTGCCATGATTGGTGGTGGAGGAGGTGGTGGTGGTGGTGGTaGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGG | + |
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Preference number: 1 (lower is better) Translates to: NSCHDWWWRRWWWWW*WWCVCVSVCPIKTW Trigger: CCAGGTCTTTATGGGACAGACAGACACACACACACACCACCACCACCACCACCACCACCACCTCCTCCACCACCAATCATGGCAGCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR CCA 90 bp | TCGGGCTATAACAGCTGCCATGATTGGTGGTGGAGGAGGTGGTGGTaGTGGTGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATA | + |
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Preference number: 1 (lower is better) Translates to: SGYNSCHDWWWRRWW*WWWWWCVCVSVCPI Trigger: TATGGGACAGACAGACACACACACACACCACCACCACCACCACCACCACCACCTCCTCCACCACCAATCATGGCAGCTGTTATAGCCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR CCA 90 bp | AGCTGCCATGATTGGTGGTGGAGGAGGTGGTGGTGGTGGTGGTGGTaGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: SCHDWWWRRWWWWWW*WCVCVSVCPIKTWF Trigger: AAACCAGGTCTTTATGGGACAGACAGACACACACACACACCACCACCACCACCACCACCACCACCTCCTCCACCACCAATCATGGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR CCA 90 bp | GGCTATAACAGCTGCCATGATTGGTGGTGGAGGAGGTGGTGGTGGTaGTGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAG | + |
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Preference number: 1 (lower is better) Translates to: GYNSCHDWWWRRWWW*WWWWCVCVSVCPIK Trigger: CTTTATGGGACAGACAGACACACACACACACCACCACCACCACCACCACCACCACCTCCTCCACCACCAATCATGGCAGCTGTTATAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR CCA 90 bp | TATAACAGCTGCCATGATTGGTGGTGGAGGAGGTGGTGGTGGTGGTaGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACC | + |
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Preference number: 1 (lower is better) Translates to: YNSCHDWWWRRWWWW*WWWCVCVSVCPIKT Trigger: GGTCTTTATGGGACAGACAGACACACACACACACCACCACCACCACCACCACCACCACCTCCTCCACCACCAATCATGGCAGCTGTTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR CCA 90 bp | TGCCATGATTGGTGGTGGAGGAGGTGGTGGTGGTGGTGGTGGTGGTaGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATA | + |
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Preference number: 1 (lower is better) Translates to: CHDWWWRRWWWWWWW*CVCVSVCPIKTWFI Trigger: TATAAACCAGGTCTTTATGGGACAGACAGACACACACACACACCACCACCACCACCACCACCACCACCTCCTCCACCACCAATCATGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR CCA 90 bp | TGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTaGTTTATATCGTGGTCTCCTGAGGCCATGGGCAACAAGTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: WWWWCVCVSVCPIKT*FISWSPEAMGNKCG Trigger: ACCACACTTGTTGCCCATGGCCTCAGGAGACCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACACACACACCACCACCACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR CCA 90 bp | TGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATATCGTaGTCTCCTGAGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: CVCVSVCPIKTWFIS*SPEAMGNKCGFQGQ Trigger: TTGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACACACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR TCA 90 bp | TATTTCCATTCTTTTATGAACATGTGTAGGTCCTCAGAGTTAATCTaGAATGGAGATAACATGCCTCGGGCTATAACAGCTGCCATGATT | + |
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Preference number: 1 (lower is better) Translates to: YFHSFMNMCRSSELI*NGDNMPRAITAAMI Trigger: AATCATGGCAGCTGTTATAGCCCGAGGCATGTTATCTCCATTTCAGATTAACTCTGAGGACCTACACATGTTCATAAAAGAATGGAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGTGGTGGTGGTGGTGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATTATATCGTGGTCTCCTaGGGCCATGGGCAACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: EVVVVVVVVVCVCVCLSHYIVVS*GHGQQV Trigger: CACTTGTTGCCCATGGCCTCAGGAGACCACGATATA...ATGGGACAGACAGACACACACACACACCACCACCACCACCACCACCACCACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR-3UTR CCA 90 bp | CATGCCTCGGGCTATAACAGCTGCCATGATTGGTGGTGGAGGAGGTGGTGGTGGGGTCTCCTGAGGCCATaGGCAACAAGTGTGGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: HASGYNSCHDWWWRRWWWGLLRP*ATSVVF Trigger: GAAAACCACACTTGTTGCCCATGGCCTCAGGAGACC...CCACCACCACCTCCTCCACCACCAATCATGGCAGCTGTTATAGCCCGAGGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATATCGTGGGGCCACTATCACACTTaGTGGTCTGTTCTCCACATT | + |
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Preference number: 2 (lower is better) Translates to: WWCVCVSVCPIKTWFISWGHYHT*WSVLHI Trigger: AATGTGGAGAACAGACCACCAAGTGTGATAGTGGCC...CCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACACACACACCACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATATCGTGGTCGGCCACTATCACACTTaGTGGTCTGTTCTCCACATT | + |
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Preference number: 2 (lower is better) Translates to: VVCVCVCLSHKDLVYIVVGHYHT*WSVLHI Trigger: AATGTGGAGAACAGACCACCAAGTGTGATAGTGGCC...GACCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACACACACACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATATCGTGGCAGGGTGTTCTAGCCTaGCTCACTGTTCTTAGTTAT | + |
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Preference number: 2 (lower is better) Translates to: WWCVCVSVCPIKTWFISWQGVLA*LTVLSY Trigger: ATAACTAAGAACAGTGAGTCAGGCTAGAACACCCTG...CCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACACACACACCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR-3UTR GCA 90 bp | TCGTGGTCTCCTGAGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCAAGAAATAGAAGTCCCTGGTCTTTaGTGTTTTCTTGAATTGTCT | + |
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Preference number: 2 (lower is better) Translates to: SWSPEAMGNKCGFQGQEIEVPGL*CFLELS Trigger: AGACAATTCAAGAAAACAGCAAAGACCAGGGACTTC...TATTTCTTGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAGTATGAATGTAAATGATCCTGTGGGCCACCTAACCATAGCAGACAGTTTGGAAGTCCCTGGTCTTTaGTGTTTTCTTGAATTGTCT | + |
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Preference number: 2 (lower is better) Translates to: PSMNVNDPVGHLTIADSLEVPGL*CFLELS Trigger: AGACAATTCAAGAAAACAGCAAAGACCAGGGACTTC...CAAACTGTCTGCTATGGTTAGGTGGCCCACAGGATCATTTACATTCATACTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR CCA 72 bp | TGCCATGATTGGTGGTGGAGGAGGTGGTGGTGGTGGTaGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: CHDWWWRRWWWW*WWWCVCVSVCP Trigger: GGGACAGACAGACACACACACACACCACCACCACCACCACCACCACCACCTCCTCCACCACCAATCATGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR CCA 72 bp | TGGTGGTGGAGGAGGTGGTGGTGGTGGTGGTGGTGGTaGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACC | + |
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Preference number: 3 (lower is better) Translates to: WWWRRWWWWWWW*CVCVSVCPIKT Trigger: GGTCTTTATGGGACAGACAGACACACACACACACCACCACCACCACCACCACCACCACCTCCTCCACCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR CCA 72 bp | GATTGGTGGTGGAGGAGGTGGTGGTGGTGGTGGTGGTaGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAG | + |
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Preference number: 3 (lower is better) Translates to: DWWWRRWWWWWW*WCVCVSVCPIK Trigger: CTTTATGGGACAGACAGACACACACACACACCACCACCACCACCACCACCACCACCTCCTCCACCACCAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR CCA 72 bp | CATGATTGGTGGTGGAGGAGGTGGTGGTGGTGGTGGTaGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATA | + |
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Preference number: 3 (lower is better) Translates to: HDWWWRRWWWWW*WWCVCVSVCPI Trigger: TATGGGACAGACAGACACACACACACACCACCACCACCACCACCACCACCACCTCCTCCACCACCAATCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR TCA 72 bp | CTGTCCCATAAAGACCTGGTTTATATCGTGGTCTCCTaGGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: LSHKDLVYIVVS*GHGQQVWFSGA Trigger: TGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGATATAAACCAGGTCTTTATGGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR CCA 72 bp | TGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTaGTTTATATCGTGGTCTCCTGAGGCCATGGGCAAC | + |
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Preference number: 3 (lower is better) Translates to: WCVCVSVCPIKT*FISWSPEAMGN Trigger: GTTGCCCATGGCCTCAGGAGACCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACACACACACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR-3UTR CAA 90 bp | TCGTGGTCTCCTGAGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCAAGAAATAGTCTTTGCTGTTTTCTaGAATTGTCTTCACTGCATT | + |
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Preference number: 3 (lower is better) Translates to: SWSPEAMGNKCGFQGQEIVFAVF*NCLHCI Trigger: AATGCAGTGAAGACAATTCAAGAAAACAGCAAAGAC...TATTTCTTGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR-3UTR CAA 90 bp | GTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATATCGTGGTCGTCTTTGCTGTTTTCTaGAATTGTCTTCACTGCATT | + |
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Preference number: 3 (lower is better) Translates to: VVCVCVCLSHKDLVYIVVVFAVF*NCLHCI Trigger: AATGCAGTGAAGACAATTCAAGAAAACAGCAAAGAC...GACCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACACACACACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| 3UTR TCA 72 bp | TCTTTTATGAACATGTGTAGGTCCTCAGAGTTAATCTaGAATGGAGATAACATGCCTCGGGCTATAACAGCT | + |
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Preference number: 3 (lower is better) Translates to: SFMNMCRSSELI*NGDNMPRAITA Trigger: AGCTGTTATAGCCCGAGGCATGTTATCTCCATTTCAGATTAACTCTGAGGACCTACACATGTTCATAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR GCA 90 bp | GAGGTGGTGGTGGTGGTGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAGGGCCCACCTCCGCTaGAGCCAGGCTGTGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: EVVVVVVVVVCVCVCLSHRAHLR*SQAVRA Trigger: AGCCCTCACAGCCTGGCTGCAGCGGAGGTGGGCCCT...ATGGGACAGACAGACACACACACACACCACCACCACCACCACCACCACCACCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR GCA 90 bp | GAGGTGGTGGTGGTGGTGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATCGGGTGCCCAGGCACTaGCTCCATGAGGATGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: EVVVVVVVVVCVCVCLSHRVPRH*LHEDVG Trigger: ACCCACATCCTCATGGAGGCAGTGCCTGGGCACCCG...ATGGGACAGACAGACACACACACACACCACCACCACCACCACCACCACCACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR TCA 90 bp | GAGGTGGTGGTGGTGGTGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATCTGCACCCAGGGGTATaGAGAGAAGGCTGCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: EVVVVVVVVVCVCVCLSHLHPGV*REGCSP Trigger: TGGGCTGCAGCCTTCTCTTCATACCCCTGGGTGCAG...ATGGGACAGACAGACACACACACACACCACCACCACCACCACCACCACCACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162183.8 |
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| CDS-3UTR GCA 90 bp | TATCGTGGTCTCCTGAGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCAAGAAAAGGGCCCACCTCCGCTaGAGCCAGGCTGTGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: YRGLLRPWATSVVFRGKKRAHLR*SQAVRA Trigger: AGCCCTCACAGCCTGGCTGCAGCGGAGGTGGGCCCT...TTTCTTGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR TCA 90 bp | CATGCCTCGGGCTATAACAGCTGCCATGATTGGTGGTGGAGGAGGTGGTGGTGGATATCCAGCAGAACATaGCAGCCACCGTGGCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: HASGYNSCHDWWWRRWWWISSRT*QPPWLR Trigger: TCGGAGCCACGGTGGCTGTCATGTTCTGCTGGATAT...CCACCACCACCTCCTCCACCACCAATCATGGCAGCTGTTATAGCCCGAGGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR GCA 90 bp | GTGGTGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTGCGGCCATGACCGCTTaGCCGATGACTTCTTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: VVVVVVCVCVCLSHKDLVAAMTA*PMTSCQ Trigger: CTGGCAAGAAGTCATCGGGCAAGCGGTCATGGCCGC...AACCAGGTCTTTATGGGACAGACAGACACACACACACACCACCACCACCACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR GCA 90 bp | TGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATATCGTGGGGGGCTGGAGAACGCTaGGATCACCAGCGGCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: WWCVCVSVCPIKTWFISWGAGER*DHQRPE Trigger: CTCGGGCCGCTGGTGATCGCAGCGTTCTCCAGCCCC...CCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACACACACACCACCA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR TCA 90 bp | CATGCCTCGGGCTATAACAGCTGCCATGATTGGTGGTGGAGGAGGTGGTGGTGGAGGTCATGTGTGGCCTaGAGGTTGAAGCTCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: HASGYNSCHDWWWRRWWWRSCVA*RLKLSS Trigger: AGAAGAGAGCTTCAACCTTCAGGCCACACATGACCT...CCACCACCACCTCCTCCACCACCAATCATGGCAGCTGTTATAGCCCGAGGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR GCA 90 bp | TCGTGGTCTCCTGAGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCAAGAAATATCAGCAGCAGCGCAATaGCCAGCAGCATGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SWSPEAMGNKCGFQGQEISAAAQ*PAAWPA Trigger: AGCTGGCCATGCTGCTGGGCATTGCGCTGCTGCTGA...TATTTCTTGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR CCA 90 bp | GAGGTGGTGGTGGTGGTGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATGGACATATAACCAGGTaGATGGTGGCTACAGTGACC | + |
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Preference number: 4 (lower is better) Translates to: EVVVVVVVVVCVCVCLSHGHITR*MVATVT Trigger: GGTCACTGTAGCCACCATCCACCTGGTTATATGTCC...ATGGGACAGACAGACACACACACACACCACCACCACCACCACCACCACCACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR CCA 90 bp | GAGGTGGTGGTGGTGGTGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATTCTATGTCCAGCTGGTaGTACAGGAGGTCATGTGTG | + |
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Preference number: 4 (lower is better) Translates to: EVVVVVVVVVCVCVCLSHSMSSW*YRRSCV Trigger: CACACATGACCTCCTGTACCACCAGCTGGACATAGA...ATGGGACAGACAGACACACACACACACCACCACCACCACCACCACCACCACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR CCA 90 bp | CATGCCTCGGGCTATAACAGCTGCCATGATTGGTGGTGGAGGAGGTGGTGGTGGACCGTCAGTCTTCTTTaGTACAAGGTCAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HASGYNSCHDWWWRRWWWTVSLL*YKVSSS Trigger: GCTGCTGCTGACCTTGTACCAAAGAAGACTGACGGT...CCACCACCACCTCCTCCACCACCAATCATGGCAGCTGTTATAGCCCGAGGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR TCA 90 bp | GAGGTGGTGGTGGTGGTGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATGCCCAAGGACTCCTCTaGCTATCAGCTGAGAATAAA | + |
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Preference number: 4 (lower is better) Translates to: EVVVVVVVVVCVCVCLSHAQGLL*LSAENK Trigger: TTTATTCTCAGCTGATAGTCAGAGGAGTCCTTGGGC...ATGGGACAGACAGACACACACACACACCACCACCACCACCACCACCACCACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR TCA 90 bp | AATGTAAATGATCCTGTGGGCCACCTAACCATAGCAGACAGTTTGAGCAGGCCAGCTGCAGCCAGGCTGTaGGGGCTGGTAAGACCACAG | + |
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Preference number: 4 (lower is better) Translates to: NVNDPVGHLTIADSLSRPAAARL*GLVRPQ Trigger: CTGTGGTCTTACCAGCCCTCACAGCCTGGCTGCAGC...TGGCCTGCTCAAACTGTCTGCTATGGTTAGGTGGCCCACAGGATCATTTACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR GCA 90 bp | TGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATATCGTGGTCTCCTGAGGCCTCAGCAGCAGCGCAATaGCCAGCAGCATGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: CVSVCPIKTWFISWSPEASAAAQ*PAAWPA Trigger: AGCTGGCCATGCTGCTGGGCATTGCGCTGCTGCTGA...GGCCTCAGGAGACCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR GCA 90 bp | AATGTAAATGATCCTGTGGGCCACCTAACCATAGCAGACAGTTTGAGCAGGCCACGGGTGCCCAGGCACTaGCTCCATGAGGATGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: NVNDPVGHLTIADSLSRPRVPRH*LHEDVG Trigger: ACCCACATCCTCATGGAGGCAGTGCCTGGGCACCCG...TGGCCTGCTCAAACTGTCTGCTATGGTTAGGTGGCCCACAGGATCATTTACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR GCA 90 bp | TATCGTGGTCTCCTGAGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCAAGAAAGGTCCTCCTGTCCACTaGACCCAGGGGTATGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: YRGLLRPWATSVVFRGKKGPPVH*TQGYEE Trigger: CTCTTCATACCCCTGGGTGCAGTGGACAGGAGGACC...TTTCTTGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162183.8 |
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| CDS-3UTR TCA 90 bp | CATGCCTCGGGCTATAACAGCTGCCATGATTGGTGGTGGAGGAGGTGGTGGTGGATGAAACTGTGTGGCTaGTATCCAGCAGAACATGAC | + |
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Preference number: 4 (lower is better) Translates to: HASGYNSCHDWWWRRWWWMKLCG*YPAEHD Trigger: GTCATGTTCTGCTGGATATCAGCCACACAGTTTCAT...CCACCACCACCTCCTCCACCACCAATCATGGCAGCTGTTATAGCCCGAGGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR TCA 90 bp | GTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATATCGTGGTCGCCTCGGGGCAGGGCTaGGTAGAAATACCACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VVCVCVCLSHKDLVYIVVASGQG*VEIPQE Trigger: CTCCTGTGGTATTTCTACTCAGCCCTGCCCCGAGGC...GACCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACACACACACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162183.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGAAGTCCCTGGTCTTTGCTGTTTTCTTGAATTGTCTTCACTGCATTAGAGGGGCTGGAGAACGCTaGGATCACCAGCGGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CWKSLVFAVFLNCLHCIRGAGER*DHQRPE Trigger: CTCGGGCCGCTGGTGATCGCAGCGTTCTCCAGCCCC...TCTAATGCAGTGAAGACAATTCAAGAAAACAGCAAAGACCAGGGACTTCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR CCA 90 bp | TATCGTGGTCTCCTGAGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCAAGAAACATAAACCACGGGGCTaGAGAACGCTGCGATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: YRGLLRPWATSVVFRGKKHKPRG*RTLRSP Trigger: TGGTGATCGCAGCGTTCTCCAGCCCCGTGGTTTATG...TTTCTTGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR CCA 90 bp | GTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATATCGTGGTCACAGAGAAGCCCTGCTaGGATGGCGTGTCGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VVCVCVCLSHKDLVYIVVTEKPC*DGVSEH Trigger: GTGCTCCGACACGCCATCCCAGCAGGGCTTCTCTGT...GACCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACACACACACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR CCA 90 bp | TCGTGGTCTCCTGAGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCAAGAAATACGTGACACTCCTGTCTaGGCAGCAGCCACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SWSPEAMGNKCGFQGQEIRDTPV*AAATSM Trigger: CATTGATGTGGCTGCTGCCCAGACAGGAGTGTCACG...TATTTCTTGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR CCA 90 bp | TATCGTGGTCTCCTGAGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCAAGAAACGTGACACTCCTGTCTaGGCAGCAGCCACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: YRGLLRPWATSVVFRGKKRDTPV*AAATSM Trigger: CATTGATGTGGCTGCTGCCCAGACAGGAGTGTCACG...TTTCTTGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR TCA 90 bp | TATCGTGGTCTCCTGAGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCAAGAAACCCCACCAGGGTAGTTaGAATGAGACACATAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YRGLLRPWATSVVFRGKKPHQGS*NETHRG Trigger: CCCTCTATGTGTCTCATTTCAACTACCCTGGTGGGG...TTTCTTGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTAGAAGGACATCTGTCTaGGGTGGTACCAGCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VVVVVVCVCVCLSHKDLVRRTSV*GGTSSC Trigger: ACATGAGCTGGTACCACCTCAGACAGATGTCCTTCT...AACCAGGTCTTTATGGGACAGACAGACACACACACACACCACCACCACCACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR GCA 90 bp | GTGGTGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTACCGTGGCTCCGAACTaGTGTCTCACTTCCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VVVVVVCVCVCLSHKDLVTVAPN*CLTSFC Trigger: ACAAAAGGAAGTGAGACAGCAGTTCGGAGCCACGGT...AACCAGGTCTTTATGGGACAGACAGACACACACACACACCACCACCACCACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTACCGTCAGTCTTCTTTaGTACAAGGTCAGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VVVVVVCVCVCLSHKDLVTVSLL*YKVSSS Trigger: GCTGCTGCTGACCTTGTACCAAAGAAGACTGACGGT...AACCAGGTCTTTATGGGACAGACAGACACACACACACACCACCACCACCACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGTATGAATGTAAATGATCCTGTGGGCCACCTAACCATAGCAGACAGTTTGACAGAGAAGCCCTGCTaGGATGGCGTGTCGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSMNVNDPVGHLTIADSLTEKPC*DGVSEH Trigger: GTGCTCCGACACGCCATCCCAGCAGGGCTTCTCTGT...CAAACTGTCTGCTATGGTTAGGTGGCCCACAGGATCATTTACATTCATACTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTGCCCAAGGACTCCTCTaGCTATCAGCTGAGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: VVVVVVCVCVCLSHKDLVAQGLL*LSAENK Trigger: TTTATTCTCAGCTGATAGTCAGAGGAGTCCTTGGGC...AACCAGGTCTTTATGGGACAGACAGACACACACACACACCACCACCACCACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGAAGTCCCTGGTCTTTGCTGTTTTCTTGAATTGTCTTCACTGCATTAGAGCTGCAGCCAGGCTGTaGGGGCTGGTAAGACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CWKSLVFAVFLNCLHCIRAAARL*GLVRPQ Trigger: CTGTGGTCTTACCAGCCCTCACAGCCTGGCTGCAGC...TCTAATGCAGTGAAGACAATTCAAGAAAACAGCAAAGACCAGGGACTTCCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR TCA 90 bp | TCGTGGTCTCCTGAGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCAAGAAATAAGAAGGACATCTGTCTaGGGTGGTACCAGCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SWSPEAMGNKCGFQGQEIRRTSV*GGTSSC Trigger: ACATGAGCTGGTACCACCTCAGACAGATGTCCTTCT...TATTTCTTGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR TCA 90 bp | TGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATATCGTGGCAGGCACTGCCTCCATaGGGATGTGGGTGTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WWCVCVSVCPIKTWFISWQALPP*GCGCSS Trigger: TGAACTACACCCACATCCTCATGGAGGCAGTGCCTG...CCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACACACACACCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR TCA 90 bp | AATGTAAATGATCCTGTGGGCCACCTAACCATAGCAGACAGTTTGAGCAGGCCACAGGCACTGCCTCCATaGGGATGTGGGTGTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NVNDPVGHLTIADSLSRPQALPP*GCGCSS Trigger: TGAACTACACCCACATCCTCATGGAGGCAGTGCCTG...TGGCCTGCTCAAACTGTCTGCTATGGTTAGGTGGCCCACAGGATCATTTACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR TCA 90 bp | TGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATATCGTGGCCCCACCAGGGTAGTTaGAATGAGACACATAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WWCVCVSVCPIKTWFISWPHQGS*NETHRG Trigger: CCCTCTATGTGTCTCATTTCAACTACCCTGGTGGGG...CCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACACACACACCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGAAGTCCCTGGTCTTTGCTGTTTTCTTGAATTGTCTTCACTGCATTAGAGCGGCCATGACCGCTTaGCCGATGACTTCTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CWKSLVFAVFLNCLHCIRAAMTA*PMTSCQ Trigger: CTGGCAAGAAGTCATCGGGCAAGCGGTCATGGCCGC...TCTAATGCAGTGAAGACAATTCAAGAAAACAGCAAAGACCAGGGACTTCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR TCA 90 bp | AATGTAAATGATCCTGTGGGCCACCTAACCATAGCAGACAGTTTGAGCAGGCCAAGGTCATGTGTGGCCTaGAGGTTGAAGCTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVNDPVGHLTIADSLSRPRSCVA*RLKLSS Trigger: AGAAGAGAGCTTCAACCTTCAGGCCACACATGACCT...TGGCCTGCTCAAACTGTCTGCTATGGTTAGGTGGCCCACAGGATCATTTACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR TCA 90 bp | TCGTGGTCTCCTGAGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCAAGAAATATCGTACAGTAGAACATaGGATGAAACTGTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SWSPEAMGNKCGFQGQEISYSRT*DETVWL Trigger: CAGCCACACAGTTTCATCTCATGTTCTACTGTACGA...TATTTCTTGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR TCA 90 bp | GTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATATCGTGGTCGCTTTGTCTGCAGGTTaGCATCAAAGGGTGGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VVCVCVCLSHKDLVYIVVALSAG*HQRVAV Trigger: AACTGCCACCCTTTGATGTCAACCTGCAGACAAAGC...GACCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACACACACACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR GCA 90 bp | AATGTAAATGATCCTGTGGGCCACCTAACCATAGCAGACAGTTTGAGCAGGCCAACAGGAGTGGGGAAGTaGCCCAGTTGGAACTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NVNDPVGHLTIADSLSRPTGVGK*PSWNFC Trigger: ACAAAAGTTCCAACTGGGGCACTTCCCCACTCCTGT...TGGCCTGCTCAAACTGTCTGCTATGGTTAGGTGGCCCACAGGATCATTTACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162183.8 |
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| CDS-3UTR CCA 90 bp | AATGTAAATGATCCTGTGGGCCACCTAACCATAGCAGACAGTTTGAGCAGGCCAGGACATATAACCAGGTaGATGGTGGCTACAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: NVNDPVGHLTIADSLSRPGHITR*MVATVT Trigger: GGTCACTGTAGCCACCATCCACCTGGTTATATGTCC...TGGCCTGCTCAAACTGTCTGCTATGGTTAGGTGGCCCACAGGATCATTTACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR CCA 90 bp | GTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATATCGTGGTCTCTATGTCCAGCTGGTaGTACAGGAGGTCATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VVCVCVCLSHKDLVYIVVSMSSW*YRRSCV Trigger: CACACATGACCTCCTGTACCACCAGCTGGACATAGA...GACCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACACACACACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR CCA 90 bp | AACACCAGGCATGCTGTAGACATGCTGGAAGTCCCTGGTCTTTGCTGTTTTCTTGGGAAGTGCCCCAGTTaGAACTTTTGTTCAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: NTRHAVDMLEVPGLCCFLGKCPS*NFCSGQ Trigger: CTGTCCTGAACAAAAGTTCCAACTGGGGCACTTCCC...AAGAAAACAGCAAAGACCAGGGACTTCCAGCATGTCTACAGCATGCCTGGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162183.8 |
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| CDS-3UTR GCA 90 bp | TGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATATCGTGGTCTCCTGAGGCCACATTCACCAAGATATaGCCTGTCACCAGCATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CVSVCPIKTWFISWSPEATFTKI*PVTSIA Trigger: AGCTATGCTGGTGACAGGGCATATCTTGGTGAATGT...GGCCTCAGGAGACCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR CCA 90 bp | GTGGTGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTAGCTCTCACCTTGTATaGCCAAGACTTTTTATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVVVVVCVCVCLSHKDLVSSHLV*PRLFIQ Trigger: CTGAATAAAAAGTCTTGGCCATACAAGGTGAGAGCT...AACCAGGTCTTTATGGGACAGACAGACACACACACACACCACCACCACCACCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR CCA 90 bp | GTGGTGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTGTTGACATCAAAGGGTaGCAGTTTCATCAAATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVVVVVCVCVCLSHKDLVVDIKG*QFHQIQ Trigger: CTGAATTTGATGAAACTGCCACCCTTTGATGTCAAC...AACCAGGTCTTTATGGGACAGACAGACACACACACACACCACCACCACCACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR TCA 90 bp | TGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATATCGTGGATGAAACTGTGTGGCTaGTATCCAGCAGAACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: WWCVCVSVCPIKTWFISWMKLCG*YPAEHD Trigger: GTCATGTTCTGCTGGATATCAGCCACACAGTTTCAT...CCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACACACACACCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR GCA 90 bp | AACACCAGGCATGCTGTAGACATGCTGGAAGTCCCTGGTCTTTGCTGTTTTCTTACATTCACCAAGATATaGCCTGTCACCAGCATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NTRHAVDMLEVPGLCCFLTFTKI*PVTSIA Trigger: AGCTATGCTGGTGACAGGGCATATCTTGGTGAATGT...AAGAAAACAGCAAAGACCAGGGACTTCCAGCATGTCTACAGCATGCCTGGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR CCA 90 bp | TGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATATCGTGGAGCTCTCACCTTGTATaGCCAAGACTTTTTATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WWCVCVSVCPIKTWFISWSSHLV*PRLFIQ Trigger: CTGAATAAAAAGTCTTGGCCATACAAGGTGAGAGCT...CCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACACACACACCACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS-3UTR CCA 90 bp | AATGTAAATGATCCTGTGGGCCACCTAACCATAGCAGACAGTTTGAGCAGGCCAGTTGACATCAAAGGGTaGCAGTTTCATCAAATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NVNDPVGHLTIADSLSRPVDIKG*QFHQIQ Trigger: CTGAATTTGATGAAACTGCCACCCTTTGATGTCAAC...TGGCCTGCTCAAACTGTCTGCTATGGTTAGGTGGCCCACAGGATCATTTACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGAAGTCCCTGGTCTTTGCTGTTTTCTTGAATTGTCTTCACTGCATTAGATCGTACAGTAGAACATaGGATGAAACTGTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CWKSLVFAVFLNCLHCIRSYSRT*DETVWL Trigger: CAGCCACACAGTTTCATCTCATGTTCTACTGTACGA...TCTAATGCAGTGAAGACAATTCAAGAAAACAGCAAAGACCAGGGACTTCCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS TCA 90 bp | CTGAGAGCCAGACAAACAGGGCCCACCTCCGCTGCAGCCAGGCTGTaGGGGCTGGTAAGACCACAGCCAGGGCCAACACGTTGGGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRARQTGPTSAAARL*GLVRPQPGPTRWGV Trigger: CACTCCCCAACGTGTTGGCCCTGGCTGTGGTCTTACCAGCCCTCACAGCCTGGCTGCAGCGGAGGTGGGCCCTGTTTGTCTGGCTCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS GCA 90 bp | CAGGACTCGATGTGTGTCCCTGTAGAGGGCCGGGTGCCCAGGCACTaGCTCCATGAGGATGTGGGTGTAGTTCAGCATGGCCGCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QDSMCVPVEGRVPRH*LHEDVGVVQHGRCS Trigger: GGAGCAGCGGCCATGCTGAACTACACCCACATCCTCATGGAGGCAGTGCCTGGGCACCCGGCCCTCTACAGGGACACACATCGAGTCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS TCA 90 bp | CAGCAGCATGGCCAGCTCAGCCCTGAAGCCAATGATGACGAAGGCTaGGAGCCAGACAAACAGGGCCCACCTCCGCTGCAGCCAGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QQHGQLSPEANDDEG*EPDKQGPPPLQPGC Trigger: ACAGCCTGGCTGCAGCGGAGGTGGGCCCTGTTTGTCTGGCTCTCAGCCTTCGTCATCATTGGCTTCAGGGCTGAGCTGGCCATGCTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS GCA 90 bp | ATGATGACGAAGGCTGAGAGCCAGACAAACAGGGCCCACCTCCGCTaGAGCCAGGCTGTGAGGGCTGGTAAGACCACAGCCAGGGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: MMTKAESQTNRAHLR*SQAVRAGKTTARAN Trigger: GTTGGCCCTGGCTGTGGTCTTACCAGCCCTCACAGCCTGGCTGCAGCGGAGGTGGGCCCTGTTTGTCTGGCTCTCAGCCTTCGTCATCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR CAA 90 bp | CATGCCTCGGGCTATAACAGCTGCCATGATTGGTGGTGGAGGAGGTGGTGGTGGCCACGAATCCCAAGCTaGGCAGGGCCAGTGCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: HASGYNSCHDWWWRRWWWPRIPS*AGPVHR Trigger: CCTATGCACTGGCCCTGCCAAGCTTGGGATTCGTGG...CCACCACCACCTCCTCCACCACCAATCATGGCAGCTGTTATAGCCCGAGGCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162183.8 |
||
| CDS CCA 90 bp | AGTCCACAGCAACCGTCAGCCCTAGACAGAGAAGCCCTGCTGGGATaGCGTGTCGGAGCACTCTGGCCACCGTCAGTCTTCTTTGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: SPQQPSALDREALLG*RVGALWPPSVFFGT Trigger: TGTACCAAAGAAGACTGACGGTGGCCAGAGTGCTCCGACACGCCATCCCAGCAGGGCTTCTCTGTCTAGGGCTGACGGTTGCTGTGGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162183.8 |
||
| CDS CCA 90 bp | ACCAGCGGCCCGAGGAACGTCCTAGGAACAACTCCAGGAAACTCGTaGTGGTCGTACTTGTCTATGTCCAGCTGGTGGTACAGGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TSGPRNVLGTTPGNS*WSYLSMSSWWYRRS Trigger: TGACCTCCTGTACCACCAGCTGGACATAGACAAGTACGACCACCACGAGTTTCCTGGAGTTGTTCCTAGGACGTTCCTCGGGCCGCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043087.15 ENSMUST00000159328.2 ENSMUST00000162183.8 |
||
| CDS CCA 90 bp | AGCGGCCCGAGGAACGTCCTAGGAACAACTCCAGGAAACTCGTGGTaGTCGTACTTGTCTATGTCCAGCTGGTGGTACAGGAGGTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: SGPRNVLGTTPGNSW*SYLSMSSWWYRRSC Trigger: ACATGACCTCCTGTACCACCAGCTGGACATAGACAAGTACGACCACCACGAGTTTCCTGGAGTTGTTCCTAGGACGTTCCTCGGGCCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043087.15 ENSMUST00000159328.2 ENSMUST00000162183.8 |
||
| CDS TCA 90 bp | GGGGAGTGTCCTCGTACAGTAGAACATGAGATGAAACTGTGTGGCTaGTATCCAGCAGAACATGACAGCCACCGTGGCTCCGAACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GECPRTVEHEMKLCG*YPAEHDSHRGSELL Trigger: CAGCAGTTCGGAGCCACGGTGGCTGTCATGTTCTGCTGGATATCAGCCACACAGTTTCATCTCATGTTCTACTGTACGAGGACACTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043087.15 ENSMUST00000159328.2 ENSMUST00000162183.8 |
||
| CDS TCA 90 bp | CCGCTGCTCCCACATCTTCACTCTTGTCATACCTCCAGTCATCATTaGCCTGTAGAAACCGTGACACTCCTGTCTGGGCAGCAGCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: PLLPHLHSCHTSSHH*PVETVTLLSGQQPH Trigger: ATGTGGCTGCTGCCCAGACAGGAGTGTCACGGTTTCTACAGGTCAATGATGACTGGAGGTATGACAAGAGTGAAGATGTGGGAGCAGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS GCA 90 bp | AGGCACTGCCTCCATGAGGATGTGGGTGTAGTTCAGCATGGCCGCTaGTCCCACATCTTCACTCTTGTCATACCTCCAGTCATCATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RHCLHEDVGVVQHGR*SHIFTLVIPPVIID Trigger: GTCAATGATGACTGGAGGTATGACAAGAGTGAAGATGTGGGAGCAGCGGCCATGCTGAACTACACCCACATCCTCATGGAGGCAGTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR CAA 90 bp | TCGTGGTCTCCTGAGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCAAGAAATACACCGTCAGTCTTCTTaGGTACAAGGTCAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SWSPEAMGNKCGFQGQEIHRQSS*VQGQQQ Trigger: CTGCTGCTGACCTTGTACCAAAGAAGACTGACGGTG...TATTTCTTGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR CAA 90 bp | TATCGTGGTCTCCTGAGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCAAGAAACACCGTCAGTCTTCTTaGGTACAAGGTCAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: YRGLLRPWATSVVFRGKKHRQSS*VQGQQQ Trigger: CTGCTGCTGACCTTGTACCAAAGAAGACTGACGGTG...TTTCTTGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR CAA 90 bp | TCGTGGTCTCCTGAGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCAAGAAATAACCAGAGATGCCAACTaGCCTAGACAGAGAAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SWSPEAMGNKCGFQGQEITRDAN*PRQRSP Trigger: AGGGCTTCTCTGTCTAGGCAAGTTGGCATCTCTGGT...TATTTCTTGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043087.15 |
||
| CDS TCA 90 bp | GTACCAGCTCATGTAGCTGCTGCATCGCAACCCCACCAGGGTAGTTaGAATGAGACACATAGAGGGACGTGGCTGTATATGCCACATTCA | + |
|
Preference number: 5 (lower is better) Translates to: VPAHVAAASQPHQGS*NETHRGTWLYMPHS Trigger: TGAATGTGGCATATACAGCCACGTCCCTCTATGTGTCTCATTTCAACTACCCTGGTGGGGTTGCGATGCAGCAGCTACATGAGCTGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR CAA 90 bp | GTGGTGGTGGTGGTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTCCCACATCTTCACTCTaGTCATACCTCCAGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: VVVVVVCVCVCLSHKDLVPTSSL*SYLQSS Trigger: TGATGACTGGAGGTATGACAAGAGTGAAGATGTGGG...AACCAGGTCTTTATGGGACAGACAGACACACACACACACCACCACCACCACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS GCA 90 bp | GTGGCTGATATCCAGCAGAACATGACAGCCACCGTGGCTCCGAACTaGTGTCTCACTTCCTTTTGTAATGTCCAGAGTCCAGAAATCACA | + |
|
Preference number: 5 (lower is better) Translates to: VADIQQNMTATVAPN*CLTSFCNVQSPEIT Trigger: TGTGATTTCTGGACTCTGGACATTACAAAAGGAAGTGAGACAGCAGTTCGGAGCCACGGTGGCTGTCATGTTCTGCTGGATATCAGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043087.15 ENSMUST00000159328.2 ENSMUST00000162183.8 |
||
| CDS-3UTR CAA 90 bp | TCGTGGTCTCCTGAGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCAAGAAATATACCTCCAGTCATCATaGACCTGTAGAAACCGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SWSPEAMGNKCGFQGQEIYLQSS*TCRNRD Trigger: GTCACGGTTTCTACAGGTCAATGATGACTGGAGGTA...TATTTCTTGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR CAA 90 bp | TATCGTGGTCTCCTGAGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCAAGAAATACCTCCAGTCATCATaGACCTGTAGAAACCGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: YRGLLRPWATSVVFRGKKYLQSS*TCRNRD Trigger: GTCACGGTTTCTACAGGTCAATGATGACTGGAGGTA...TTTCTTGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR CAA 90 bp | TCGTGGTCTCCTGAGGCCATGGGCAACAAGTGTGGTTTTCAGGGGCAAGAAATACCCACATCTTCACTCTaGTCATACCTCCAGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SWSPEAMGNKCGFQGQEIPTSSL*SYLQSS Trigger: TGATGACTGGAGGTATGACAAGAGTGAAGATGTGGG...TATTTCTTGCCCCTGAAAACCACACTTGTTGCCCATGGCCTCAGGAGACCACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR CAA 90 bp | GTGGTGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATATCGTGGTCATGAACCGCAGCTCCTaGTGTGGGAGGAGTGAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: VVCVCVCLSHKDLVYIVVMNRSS*CGRSEY Trigger: ATACTCACTCCTCCCACACAAGGAGCTGCGGTTCAT...GACCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACACACACACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162183.8 |
||
| CDS GCA 90 bp | ACCAGGGTAGTTGAAATGAGACACATAGAGGGACGTGGCTGTATATaGCACATTCACCAAGATATGCCCTGTCACCAGCATAGCTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: TRVVEMRHIEGRGCI*HIHQDMPCHQHSSH Trigger: GTGAGAGCTATGCTGGTGACAGGGCATATCTTGGTGAATGTGGCATATACAGCCACGTCCCTCTATGTGTCTCATTTCAACTACCCTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS CCA 90 bp | ATTCACCAAGATATGCCCTGTCACCAGCATAGCTCTCACCTTGTATaGCCAAGACTTTTTATTCAGGATATAGGTGCAGCCTCTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IHQDMPCHQHSSHLV*PRLFIQDIGAASGS Trigger: GCTGCCAGAGGCTGCACCTATATCCTGAATAAAAAGTCTTGGCCATACAAGGTGAGAGCTATGCTGGTGACAGGGCATATCTTGGTGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162183.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTCTGTCTGTCCCATAAAGACCTGGTTTATATCGTGGTCTCCTAGCTTTGTCTGCAGGTaGACATCAAAGGGTGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CVCVSVCPIKTWFISWSPSFVCR*TSKGGS Trigger: ACTGCCACCCTTTGATGTCAACCTGCAGACAAAGCT...AGGAGACCACGATATAAACCAGGTCTTTATGGGACAGACAGACACACACACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGTATGAATGTAAATGATCCTGTGGGCCACCTAACCATAGCAGACAGTTTGAGCTTTGTCTGCAGGTaGACATCAAAGGGTGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PSMNVNDPVGHLTIADSLSFVCR*TSKGGS Trigger: ACTGCCACCCTTTGATGTCAACCTGCAGACAAAGCT...CAAACTGTCTGCTATGGTTAGGTGGCCCACAGGATCATTTACATTCATACTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS-3UTR CAA 90 bp | AATGTAAATGATCCTGTGGGCCACCTAACCATAGCAGACAGTTTGAGCAGGCCATTGTTCAGGACAGTGTaGTACCAAAGCACCACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: NVNDPVGHLTIADSLSRPLFRTV*YQSTTP Trigger: AGGAGTGGTGCTTTGGTACAACACTGTCCTGAACAA...TGGCCTGCTCAAACTGTCTGCTATGGTTAGGTGGCCCACAGGATCATTTACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162183.8 |
||
| CDS TCA 72 bp | AGACAAACAGGGCCCACCTCCGCTGCAGCCAGGCTGTaGGGGCTGGTAAGACCACAGCCAGGGCCAACACGT | + |
|
Preference number: 6 (lower is better) Translates to: RQTGPTSAAARL*GLVRPQPGPTR Trigger: ACGTGTTGGCCCTGGCTGTGGTCTTACCAGCCCTCACAGCCTGGCTGCAGCGGAGGTGGGCCCTGTTTGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS GCA 72 bp | AAGGCTGAGAGCCAGACAAACAGGGCCCACCTCCGCTaGAGCCAGGCTGTGAGGGCTGGTAAGACCACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: KAESQTNRAHLR*SQAVRAGKTTA Trigger: GGCTGTGGTCTTACCAGCCCTCACAGCCTGGCTGCAGCGGAGGTGGGCCCTGTTTGTCTGGCTCTCAGCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS GCA 72 bp | GCTTGGCAGGGCCAGTGCATAGGTCCTCCTGTCCACTaGACCCAGGGGTATGAAGAGAAGGCTGCAGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AWQGQCIGPPVH*TQGYEEKAAAQ Trigger: CTGGGCTGCAGCCTTCTCTTCATACCCCTGGGTGCAGTGGACAGGAGGACCTATGCACTGGCCCTGCCAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162183.8 |
||
| CDS CAA 90 bp | TGCTGGGATGGCGTGTCGGAGCACTCTGGCCACCGTCAGTCTTCTTaGGTACAAGGTCAGCAGCAGCGCAATGCCCAGCAGCATGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CWDGVSEHSGHRQSS*VQGQQQRNAQQHGQ Trigger: CTGGCCATGCTGCTGGGCATTGCGCTGCTGCTGACCTTGTACCAAAGAAGACTGACGGTGGCCAGAGTGCTCCGACACGCCATCCCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS GCA 72 bp | AAGCGAGAGCACATAAACCACGGGGCTGGAGAACGCTaGGATCACCAGCGGCCCGAGGAACGTCCTAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: KREHINHGAGER*DHQRPEERPRN Trigger: GTTCCTAGGACGTTCCTCGGGCCGCTGGTGATCGCAGCGTTCTCCAGCCCCGTGGTTTATGTGCTCTCGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043087.15 ENSMUST00000159328.2 ENSMUST00000162183.8 |
||
| CDS CAA 72 bp | GGCGTGTCGGAGCACTCTGGCCACCGTCAGTCTTCTTaGGTACAAGGTCAGCAGCAGCGCAATGCCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GVSEHSGHRQSS*VQGQQQRNAQQ Trigger: CTGCTGGGCATTGCGCTGCTGCTGACCTTGTACCAAAGAAGACTGACGGTGGCCAGAGTGCTCCGACACGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS CAA 90 bp | GCTCCTTGTGTGGGAGGAGTGAGTATAGAGCCACGAATCCCAAGCTaGGCAGGGCCAGTGCATAGGTCCTCCTGTCCACTGCACCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: APCVGGVSIEPRIPS*AGPVHRSSCPLHPG Trigger: CCCTGGGTGCAGTGGACAGGAGGACCTATGCACTGGCCCTGCCAAGCTTGGGATTCGTGGCTCTATACTCACTCCTCCCACACAAGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162183.8 |
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| CDS CAA 72 bp | GTGGGAGGAGTGAGTATAGAGCCACGAATCCCAAGCTaGGCAGGGCCAGTGCATAGGTCCTCCTGTCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: VGGVSIEPRIPS*AGPVHRSSCPL Trigger: CAGTGGACAGGAGGACCTATGCACTGGCCCTGCCAAGCTTGGGATTCGTGGCTCTATACTCACTCCTCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162183.8 |
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| CDS CCA 72 bp | ATACTTCTAAAAGCGAGAGCACATAAACCACGGGGCTaGAGAACGCTGCGATCACCAGCGGCCCGAGGAACG | + |
|
Preference number: 6 (lower is better) Translates to: ILLKARAHKPRG*RTLRSPAARGT Trigger: CGTTCCTCGGGCCGCTGGTGATCGCAGCGTTCTCCAGCCCCGTGGTTTATGTGCTCTCGCTTTTAGAAGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043087.15 ENSMUST00000159328.2 ENSMUST00000162183.8 |
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| CDS CAA 90 bp | GCCGCTGCTCCCACATCTTCACTCTTGTCATACCTCCAGTCATCATaGACCTGTAGAAACCGTGACACTCCTGTCTGGGCAGCAGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: AAAPTSSLLSYLQSS*TCRNRDTPVWAAAT Trigger: TGTGGCTGCTGCCCAGACAGGAGTGTCACGGTTTCTACAGGTCAATGATGACTGGAGGTATGACAAGAGTGAAGATGTGGGAGCAGCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS GCA 72 bp | CTCCATGAGGATGTGGGTGTAGTTCAGCATGGCCGCTaGTCCCACATCTTCACTCTTGTCATACCTCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LHEDVGVVQHGR*SHIFTLVIPPV Trigger: GACTGGAGGTATGACAAGAGTGAAGATGTGGGAGCAGCGGCCATGCTGAACTACACCCACATCCTCATGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS CCA 72 bp | CCGAGGAACGTCCTAGGAACAACTCCAGGAAACTCGTaGTGGTCGTACTTGTCTATGTCCAGCTGGTGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: PRNVLGTTPGNS*WSYLSMSSWWY Trigger: GTACCACCAGCTGGACATAGACAAGTACGACCACCACGAGTTTCCTGGAGTTGTTCCTAGGACGTTCCTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043087.15 ENSMUST00000159328.2 ENSMUST00000162183.8 |
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| CDS CCA 72 bp | AGGAACGTCCTAGGAACAACTCCAGGAAACTCGTGGTaGTCGTACTTGTCTATGTCCAGCTGGTGGTACAGG | + |
|
Preference number: 6 (lower is better) Translates to: RNVLGTTPGNSW*SYLSMSSWWYR Trigger: CCTGTACCACCAGCTGGACATAGACAAGTACGACCACCACGAGTTTCCTGGAGTTGTTCCTAGGACGTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043087.15 ENSMUST00000159328.2 ENSMUST00000162183.8 |
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| CDS TCA 72 bp | CCTCGTACAGTAGAACATGAGATGAAACTGTGTGGCTaGTATCCAGCAGAACATGACAGCCACCGTGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PRTVEHEMKLCG*YPAEHDSHRGS Trigger: GGAGCCACGGTGGCTGTCATGTTCTGCTGGATATCAGCCACACAGTTTCATCTCATGTTCTACTGTACGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043087.15 ENSMUST00000159328.2 ENSMUST00000162183.8 |
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| CDS TCA 72 bp | CATGTAGCTGCTGCATCGCAACCCCACCAGGGTAGTTaGAATGAGACACATAGAGGGACGTGGCTGTATATG | + |
|
Preference number: 6 (lower is better) Translates to: HVAAASQPHQGS*NETHRGTWLYM Trigger: CATATACAGCCACGTCCCTCTATGTGTCTCATTTCAACTACCCTGGTGGGGTTGCGATGCAGCAGCTACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS GCA 72 bp | ATCCAGCAGAACATGACAGCCACCGTGGCTCCGAACTaGTGTCTCACTTCCTTTTGTAATGTCCAGAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: IQQNMTATVAPN*CLTSFCNVQSP Trigger: TGGACTCTGGACATTACAAAAGGAAGTGAGACAGCAGTTCGGAGCCACGGTGGCTGTCATGTTCTGCTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043087.15 ENSMUST00000159328.2 ENSMUST00000162183.8 |
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| CDS GCA 72 bp | ACTTTTTATTCAGGAGGCAAACCAGAGATGCCAACTTaGCTAGACAGAGAAGCCCTGCTGGGATGGCGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TFYSGGKPEMPT*LDREALLGWRV Trigger: GACACGCCATCCCAGCAGGGCTTCTCTGTCTAGGCAAGTTGGCATCTCTGGTTTGCCTCCTGAATAAAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043087.15 |
||
| CDS GCA 72 bp | AGGGACGTGGCTGTATATGCCACATTCACCAAGATATaGCCTGTCACCAGCATAGCTCTCACCTTGTATGGC | + |
|
Preference number: 6 (lower is better) Translates to: RDVAVYATFTKI*PVTSIALTLYG Trigger: GCCATACAAGGTGAGAGCTATGCTGGTGACAGGGCATATCTTGGTGAATGTGGCATATACAGCCACGTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
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| CDS CAA 72 bp | GACTTTTTATTCAGGAGGCAAACCAGAGATGCCAACTaGCCTAGACAGAGAAGCCCTGCTGGGATGGCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: DFLFRRQTRDAN*PRQRSPAGMAC Trigger: ACACGCCATCCCAGCAGGGCTTCTCTGTCTAGGCAAGTTGGCATCTCTGGTTTGCCTCCTGAATAAAAAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043087.15 |
||
| CDS CAA 72 bp | GAAGTGCCCCAGTTGGAACTTTTGTTCAGGACAGTGTaGTACCAAAGCACCACTCCTTCCGGCCATACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: EVPQLELLFRTV*YQSTTPSGHTR Trigger: CCTTGTATGGCCGGAAGGAGTGGTGCTTTGGTACAACACTGTCCTGAACAAAAGTTCCAACTGGGGCACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162183.8 |
||
| CDS TCA 72 bp | CCACATCTTCACTCTTGTCATACCTCCAGTCATCATTaGCCTGTAGAAACCGTGACACTCCTGTCTGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PHLHSCHTSSHH*PVETVTLLSGQ Trigger: CTGCCCAGACAGGAGTGTCACGGTTTCTACAGGTCAATGATGACTGGAGGTATGACAAGAGTGAAGATGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS TCA 72 bp | GCAGCCGCTCTAGAAGTACCAGCTTTGTCTGCAGGTTaGCATCAAAGGGTGGCAGTTTCATCAAATTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: AAALEVPALSAG*HQRVAVSSNSG Trigger: GCCTGAATTTGATGAAACTGCCACCCTTTGATGTCAACCTGCAGACAAAGCTGGTACTTCTAGAGCGGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS GCA 72 bp | GGCCTAAGCAGCCGCTCTAGAAGTACCAGCTTTGTCTaGAGGTTGACATCAAAGGGTGGCAGTTTCATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GLSSRSRSTSFV*RLTSKGGSFIK Trigger: TTTGATGAAACTGCCACCCTTTGATGTCAACCTGCAGACAAAGCTGGTACTTCTAGAGCGGCTGCTTAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS CAA 72 bp | CCCACATCTTCACTCTTGTCATACCTCCAGTCATCATaGACCTGTAGAAACCGTGACACTCCTGTCTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PTSSLLSYLQSS*TCRNRDTPVWA Trigger: TGCCCAGACAGGAGTGTCACGGTTTCTACAGGTCAATGATGACTGGAGGTATGACAAGAGTGAAGATGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS CAA 90 bp | GCCACATTCACCAAGATATGCCCTGTCACCAGCATAGCTCTCACCTaGTATGGCCAAGACTTTTTATTCAGGAGGCAAACCAGAGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: ATFTKICPVTSIALT*YGQDFLFRRQTRDA Trigger: GGCATCTCTGGTTTGCCTCCTGAATAAAAAGTCTTGGCCATACAAGGTGAGAGCTATGCTGGTGACAGGGCATATCTTGGTGAATGTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043087.15 |
||
| CDS CAA 90 bp | GCTGGCCTAAGCAGCCGCTCTAGAAGTACCAGCTTTGTCTGCAGGTaGACATCAAAGGGTGGCAGTTTCATCAAATTCAGGCTTATACCT | + |
|
Preference number: 6 (lower is better) Translates to: AGLSSRSRSTSFVCR*TSKGGSFIKFRLIP Trigger: AGGTATAAGCCTGAATTTGATGAAACTGCCACCCTTTGATGTCAACCTGCAGACAAAGCTGGTACTTCTAGAGCGGCTGCTTAGGCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS CAA 72 bp | AGCAGCCGCTCTAGAAGTACCAGCTTTGTCTGCAGGTaGACATCAAAGGGTGGCAGTTTCATCAAATTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSRSRSTSFVCR*TSKGGSFIKFR Trigger: CCTGAATTTGATGAAACTGCCACCCTTTGATGTCAACCTGCAGACAAAGCTGGTACTTCTAGAGCGGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS GCA 72 bp | GTTGAAATGAGACACATAGAGGGACGTGGCTGTATATaGCACATTCACCAAGATATGCCCTGTCACCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VEMRHIEGRGCI*HIHQDMPCHQH Trigger: ATGCTGGTGACAGGGCATATCTTGGTGAATGTGGCATATACAGCCACGTCCCTCTATGTGTCTCATTTCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS CCA 72 bp | GATATGCCCTGTCACCAGCATAGCTCTCACCTTGTATaGCCAAGACTTTTTATTCAGGAGGCAAACCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: DMPCHQHSSHLV*PRLFIQEANQR Trigger: TCTCTGGTTTGCCTCCTGAATAAAAAGTCTTGGCCATACAAGGTGAGAGCTATGCTGGTGACAGGGCATATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043087.15 |
||
| CDS CCA 72 bp | GATATGCCCTGTCACCAGCATAGCTCTCACCTTGTATaGCCAAGACTTTTTATTCAGGATATAGGTGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: DMPCHQHSSHLV*PRLFIQDIGAA Trigger: GGCTGCACCTATATCCTGAATAAAAAGTCTTGGCCATACAAGGTGAGAGCTATGCTGGTGACAGGGCATATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162183.8 |
||
| CDS CCA 72 bp | AAGTACCAGCTTTGTCTGCAGGTTGACATCAAAGGGTaGCAGTTTCATCAAATTCAGGCTTATACCTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: KYQLCLQVDIKG*QFHQIQAYTCS Trigger: ACTACAGGTATAAGCCTGAATTTGATGAAACTGCCACCCTTTGATGTCAACCTGCAGACAAAGCTGGTACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043087.15 ENSMUST00000162183.8 |
||
| CDS TCA 72 bp | AGAGTCCAGAAATCACACCAAGCCCAAGGACTCCTCTaGCTATCAGCTGAGAATAAAATTTGGATACTTCTA | + |
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Preference number: 6 (lower is better) Translates to: RVQKSHQAQGLL*LSAENKIWILL Trigger: TAGAAGTATCCAAATTTTATTCTCAGCTGATAGTCAGAGGAGTCCTTGGGCTTGGTGTGATTTCTGGACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043087.15 ENSMUST00000159328.2 ENSMUST00000162183.8 |
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