Pregenerated sensors for ALG11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063362Ensembl transcript IDs: ENSMUST00000072572.13, ENSMUST00000110737.3, ENSMUST00000131624.2
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCAGTTGGCAGAGTGCTAGTGCTTGTCTAGACTGCAGGAGGCCCTaGGTCCCATCACCAGCACTGCACACACTGGTGTATTCTGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: LSWQSASACLDCRRP*VPSPALHTLVYSGR Trigger: CCTCCCAGAATACACCAGTGTGTGCAGTGCTGGTGATGGGACCCAGGGCCTCCTGCAGTCTAGACAAGCACTAGCACTCTGCCAACTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR TCA 90 bp | GAGATGGAGCTCGGGACTCCCACACACGAAGCACGGGTTCTCCCATaGCCTATAGCTCCAGCTCCATGCTGTATAAAATACCCAGACTGT | + |
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Preference number: 1 (lower is better) Translates to: EMELGTPTHEARVLP*PIAPAPCCIKYPDC Trigger: ACAGTCTGGGTATTTTATACAGCATGGAGCTGGAGCTATAGGTCATGGGAGAACCCGTGCTTCGTGTGTGGGAGTCCCGAGCTCCATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR GCA 90 bp | ATGAAAGCTAGTCCTGGGGCAGCAACAGCTCTCTCTCTCTCTGTGTaGACTTTCAGGTCAGTTCCAGCTCAGGGGTCTTTGGCCTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: MKASPGAATALSLSV*TFRSVPAQGSLASF Trigger: GAAAGAGGCCAAAGACCCCTGAGCTGGAACTGACCTGAAAGTGCACACAGAGAGAGAGAGAGCTGTTGCTGCCCCAGGACTAGCTTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR CCA 90 bp | TGGGTCCCATCACCAGCACTGCACACACTGGTGTATTCTGGGAGGTaGAGGCAGGAACACTCAGGGATTAAGACAAGGAAAGGAAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: WVPSPALHTLVYSGR*RQEHSGIKTRKGKD Trigger: ATCTTTTCCTTTCCTTGTCTTAATCCCTGAGTGTTCCTGCCTCCACCTCCCAGAATACACCAGTGTGTGCAGTGCTGGTGATGGGACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR GCA 90 bp | TTGAGATCAGCTCAGTATACTTTGTGGTGGCAGTGTACACATCCCTaGTCTTCCTCACAGTCTGAGGCTCTACATGGTACTCCAGCGTCA | + |
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Preference number: 1 (lower is better) Translates to: LRSAQYTLWWQCTHP*SSSQSEALHGTPAS Trigger: TGACGCTGGAGTACCATGTAGAGCCTCAGACTGTGAGGAAGAGCAGGGATGTGTACACTGCCACCACAAAGTATACTGAGCTGATCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR CCA 90 bp | CCCTTTGGAAGGCAGTCTTTGAGATCAGCTCAGTATACTTTGTGGTaGCAGTGTACACATCCCTGCTCTTCCTCACAGTCTGAGGCTCTA | + |
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Preference number: 1 (lower is better) Translates to: PFGRQSLRSAQYTLW*QCTHPCSSSQSEAL Trigger: TAGAGCCTCAGACTGTGAGGAAGAGCAGGGATGTGTACACTGCCACCACAAAGTATACTGAGCTGATCTCAAAGACTGCCTTCCAAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR CCA 90 bp | CTTCCCTTTGGAAGGCAGTCTTTGAGATCAGCTCAGTATACTTTGTaGTGGCAGTGTACACATCCCTGCTCTTCCTCACAGTCTGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: LPFGRQSLRSAQYTL*WQCTHPCSSSQSEA Trigger: AGCCTCAGACTGTGAGGAAGAGCAGGGATGTGTACACTGCCACCACAAAGTATACTGAGCTGATCTCAAAGACTGCCTTCCAAAGGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR TCA 90 bp | CTGCTGTTTCTTTCAGCACCTCCCTTCCCTTTGGAAGGCAGTCTTTaGGATCAGCTCAGTATACTTTGTGGTGGCAGTGTACACATCCCT | + |
|
Preference number: 1 (lower is better) Translates to: LLFLSAPPFPLEGSL*DQLSILCGGSVHIP Trigger: AGGGATGTGTACACTGCCACCACAAAGTATACTGAGCTGATCTCAAAGACTGCCTTCCAAAGGGAAGGGAGGTGCTGAAAGAAACAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR GCA 90 bp | GCAGGTCGTGTGTCCAATTTAAGAGCTGTTGGTTACTGTCAAGTGTaGGTGCCATGCTGGTTTTCCATGTGGTTTATAGGTGGGATAGCT | + |
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Preference number: 1 (lower is better) Translates to: AGRVSNLRAVGYCQV*VPCWFSMWFIGGIA Trigger: AGCTATCCCACCTATAAACCACATGGAAAACCAGCATGGCACGCACACTTGACAGTAACCAACAGCTCTTAAATTGGACACACGACCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR CCA 90 bp | TTACTTCATGTTCTCGCAAGCAGAAGTGATTTGGAAAGCAGGGTTTaGGGCTTAGGATGTAGCTCAGTTGGCAGAGTGCTAGTGCTTGTC | + |
|
Preference number: 1 (lower is better) Translates to: LLHVLASRSDLESRV*GLGCSSVGRVLVLV Trigger: GACAAGCACTAGCACTCTGCCAACTGAGCTACATCCTAAGCCCCAAACCCTGCTTTCCAAATCACTTCTGCTTGCGAGAACATGAAGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR TCA 90 bp | TACTTTGTGGTGGCAGTGTACACATCCCTGCTCTTCCTCACAGTCTaGGGCTCTACATGGTACTCCAGCGTCATAGAACAGATTAAAAAC | + |
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Preference number: 1 (lower is better) Translates to: YFVVAVYTSLLFLTV*GSTWYSSVIEQIKN Trigger: GTTTTTAATCTGTTCTATGACGCTGGAGTACCATGTAGAGCCTCAGACTGTGAGGAAGAGCAGGGATGTGTACACTGCCACCACAAAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR TCA 90 bp | AGACCTCTATATCACGAGTTAAGACTGTATCTGCCTCACTCACAGTaGGATCTCCAGGGGTCTAGGAAAGAGTCCTCAGTGAAATGCATA | + |
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Preference number: 1 (lower is better) Translates to: RPLYHELRLYLPHSQ*DLQGSRKESSVKCI Trigger: TATGCATTTCACTGAGGACTCTTTCCTAGACCCCTGGAGATCTCACTGTGAGTGAGGCAGATACAGTCTTAACTCGTGATATAGAGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR GCA 90 bp | ATACTTCACAGTTGTGTTATCAATGTAAACAGGAATTTGAACCTCTaGTGTTGTGGACTCAAAACTGAATGCTTGGACCACCGAGGGGGA | + |
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Preference number: 1 (lower is better) Translates to: ILHSCVINVNRNLNL*CCGLKTECLDHRGG Trigger: TCCCCCTCGGTGGTCCAAGCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATTGATAACACAACTGTGAAGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTCTTCCTCACAGTCTGAGGCTCTACATGGTACTCCAGCGTCATAGAACAGACTGCAGGAGGCCCTaGGTCCCATCACCAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: PALPHSLRLYMVLQRHRTDCRRP*VPSPAL Trigger: CAGTGCTGGTGATGGGACCCAGGGCCTCCTGCAGTC...TGTTCTATGACGCTGGAGTACCATGTAGAGCCTCAGACTGTGAGGAAGAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGCTCTTCCTCACAGTCTGAGGCTCTACATGGTACTCCAGCGTCATAGAACAGCGGGCGGATCTCTATaGGTTCAAGGCCAGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PALPHSLRLYMVLQRHRTAGGSL*VQGQPG Trigger: ACCAGGCTGGCCTTGAACTCATAGAGATCCGCCCGC...TGTTCTATGACGCTGGAGTACCATGTAGAGCCTCAGACTGTGAGGAAGAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR GCA 90 bp | GGCCCTGGGTCCCATCACCAGCACTGCACACACTGGTGTATTCTGGGAGGTGGATCCTTTTACTTTTGGTaGTGGAGATGGAGCTCGGGA | + |
|
Preference number: 2 (lower is better) Translates to: GPGSHHQHCTHWCILGGGSFYFW*WRWSSG Trigger: TCCCGAGCTCCATCTCCAGCACCAAAAGTAAAAGGA...TCCACCTCCCAGAATACACCAGTGTGTGCAGTGCTGGTGATGGGACCCAGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAATAGGCTCTATGCTTTGGGGAGTCTCCTGGACAACCCTGGGCAATAAAGACTGCAGGAGGCCCTaGGTCCCATCACCAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: KAIGSMLWGVSWTTLGNKDCRRP*VPSPAL Trigger: CAGTGCTGGTGATGGGACCCAGGGCCTCCTGCAGTC...TTTATTGCCCAGGGTTGTCCAGGAGACTCCCCAAAGCATAGAGCCTATTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR CCA 90 bp | AGCTCAGGGGTTAGAACACTCGTGTACCATGAGCATGGCTCTAGGTTCAACCTCTTTTGGTGCTGGAGATaGAGCTCGGGACTCCCACAC | + |
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Preference number: 2 (lower is better) Translates to: SSGVRTLVYHEHGSRFNLFWCWR*SSGLPH Trigger: GTGTGGGAGTCCCGAGCTCCATCTCCAGCACCAAAA...GAGGTTGAACCTAGAGCCATGCTCATGGTACACGAGTGTTCTAACCCCTGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR TCA 90 bp | CCTATTACTTTGTGTAGGCTGTGTGGGCTACAGACAAATTTTACCGCAGACTGGGCACGGGTTCTCCCATaGCCTATAGCTCCAGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: PITLCRLCGLQTNFTADWARVLP*PIAPAP Trigger: TGGAGCTGGAGCTATAGGTCATGGGAGAACCCGTGC...CCAGTCTGCGGTAAAATTTGTCTGTAGCCCACACAGCCTACACAAAGTAATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAATAGGCTCTATGCTTTGGGGAGTCTCCTGGACAACCCTGGGCAATAAAGTGTATTCTGGGAGGTaGAGGCAGGAACACTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: KAIGSMLWGVSWTTLGNKVYSGR*RQEHSG Trigger: CCCTGAGTGTTCCTGCCTCCACCTCCCAGAATACAC...TTTATTGCCCAGGGTTGTCCAGGAGACTCCCCAAAGCATAGAGCCTATTGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR CCA 90 bp | CCTATTACTTTGTGTAGGCTGTGTGGGCTACAGACAAATTTTACCGCAGACTGGGTTGCCCTTCCCCTTTaGAAGCTCGCCTGGCACCTT | + |
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Preference number: 2 (lower is better) Translates to: PITLCRLCGLQTNFTADWVALPL*KLAWHL Trigger: AAGGTGCCAGGCGAGCTTCCAAAGGGGAAGGGCAAC...CCAGTCTGCGGTAAAATTTGTCTGTAGCCCACACAGCCTACACAAAGTAATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR CAA 90 bp | CCTGCTGTTTCTTTCAGCACCTCCCTTCCCTTTGGAAGGCAGTCTTaGAGATCAGCTCAGTATACTTTGTGGTGGCAGTGTACACATCCC | + |
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Preference number: 2 (lower is better) Translates to: PAVSFSTSLPFGRQS*RSAQYTLWWQCTHP Trigger: GGGATGTGTACACTGCCACCACAAAGTATACTGAGCTGATCTCAAAGACTGCCTTCCAAAGGGAAGGGAGGTGCTGAAAGAAACAGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGCTCTTCCTCACAGTCTGAGGCTCTACATGGTACTCCAGCGTCATAGAACATCTCGCAAGCAGAAGTaGTTTGGAAAGCAGGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: PALPHSLRLYMVLQRHRTSRKQK*FGKQGL Trigger: CAAACCCTGCTTTCCAAATCACTTCTGCTTGCGAGA...TGTTCTATGACGCTGGAGTACCATGTAGAGCCTCAGACTGTGAGGAAGAGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR CCA 90 bp | AGCTCAGGGGTTAGAACACTCGTGTACCATGAGCATGGCTCTAGGTTCAACCTCTTTTACTTTTGGTGCTaGAGATGGAGCTCGGGACTC | + |
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Preference number: 2 (lower is better) Translates to: SSGVRTLVYHEHGSRFNLFYFWC*RWSSGL Trigger: GAGTCCCGAGCTCCATCTCCAGCACCAAAAGTAAAA...GAGGTTGAACCTAGAGCCATGCTCATGGTACACGAGTGTTCTAACCCCTGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR CCA 90 bp | ACCCATACAAACCCCAATTTCCATACAAACCTAGTTATGGGAAAGATGGCTGCCTTTAGTCCCAGCACTTaGGAGACAGAGGCGGGCGGA | + |
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Preference number: 2 (lower is better) Translates to: THTNPNFHTNLVMGKMAAFSPST*ETEAGG Trigger: TCCGCCCGCCTCTGTCTCCCAAGTGCTGGGACTAAA...GGCAGCCATCTTTCCCATAACTAGGTTTGTATGGAAATTGGGGTTTGTATGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGCACTTTCAGGTCAGTTCCAGCTCAGGGGTCTTTGGCCTCTTTCTAAAGTACAGCACTGCACACACTaGTGTATTCTGGGAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: CALSGQFQLRGLWPLSKVQHCTH*CILGGG Trigger: TCCACCTCCCAGAATACACCAGTGTGTGCAGTGCTG...TACTTTAGAAAGAGGCCAAAGACCCCTGAGCTGGAACTGACCTGAAAGTGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGCACTTTCAGGTCAGTTCCAGCTCAGGGGTCTTTGGCCTCTTTCTAAAGTACAGTGTACACATCCCTaGTCTTCCTCACAGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: CALSGQFQLRGLWPLSKVQCTHP*SSSQSE Trigger: CTCAGACTGTGAGGAAGAGCAGGGATGTGTACACTG...TACTTTAGAAAGAGGCCAAAGACCCCTGAGCTGGAACTGACCTGAAAGTGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR TCA 90 bp | ATAATCATTCAAGGAAAAGAAACCATGAACTCGAGAGGTAGAAAGATGGGAAGGGCGGGCGGATCTCTATaGGTTCAAGGCCAGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: IIIQGKETMNSRGRKMGRAGGSL*VQGQPG Trigger: ACCAGGCTGGCCTTGAACTCATAGAGATCCGCCCGC...CCTTCCCATCTTTCTACCTCTCGAGTTCATGGTTTCTTTTCCTTGAATGATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR GCA 90 bp | CCTATTACTTTGTGTAGGCTGTGTGGGCTACAGACAAATTTTACCGCAGACTGGGGTTACTGTCAAGTGTaGGTGCCATGCTGGTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: PITLCRLCGLQTNFTADWGYCQV*VPCWFS Trigger: GGAAAACCAGCATGGCACGCACACTTGACAGTAACC...CCAGTCTGCGGTAAAATTTGTCTGTAGCCCACACAGCCTACACAAAGTAATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAATAGGCTCTATGCTTTGGGGAGTCTCCTGGACAACCCTGGGCAATAAATTTTACTTTTGGTGCTaGAGATGGAGCTCGGGACTC | + |
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Preference number: 2 (lower is better) Translates to: KAIGSMLWGVSWTTLGNKFYFWC*RWSSGL Trigger: GAGTCCCGAGCTCCATCTCCAGCACCAAAAGTAAAA...TTTATTGCCCAGGGTTGTCCAGGAGACTCCCCAAAGCATAGAGCCTATTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR CCA 90 bp | ACCCATACAAACCCCAATTTCCATACAAACCTAGTTATGGGAAAGATGGCTGCCCAGCACTGCACACACTaGTGTATTCTGGGAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: THTNPNFHTNLVMGKMAAQHCTH*CILGGG Trigger: TCCACCTCCCAGAATACACCAGTGTGTGCAGTGCTG...GGCAGCCATCTTTCCCATAACTAGGTTTGTATGGAAATTGGGGTTTGTATGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAATAGGCTCTATGCTTTGGGGAGTCTCCTGGACAACCCTGGGCAATAAACAAGCAGAAGTGATTTaGAAAGCAGGGTTTGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: KAIGSMLWGVSWTTLGNKQAEVI*KAGFGA Trigger: AGCCCCAAACCCTGCTTTCCAAATCACTTCTGCTTG...TTTATTGCCCAGGGTTGTCCAGGAGACTCCCCAAAGCATAGAGCCTATTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR TCA 90 bp | ATAATCATTCAAGGAAAAGAAACCATGAACTCGAGAGGTAGAAAGATGGGAAGGGCACGGGTTCTCCCATaGCCTATAGCTCCAGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: IIIQGKETMNSRGRKMGRARVLP*PIAPAP Trigger: TGGAGCTGGAGCTATAGGTCATGGGAGAACCCGTGC...CCTTCCCATCTTTCTACCTCTCGAGTTCATGGTTTCTTTTCCTTGAATGATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR TCA 90 bp | CCTATTACTTTGTGTAGGCTGTGTGGGCTACAGACAAATTTTACCGCAGACTGGATCTGTACACACCCATaGAGAAATGAGTCCACCCCA | + |
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Preference number: 2 (lower is better) Translates to: PITLCRLCGLQTNFTADWICTHP*RNESTP Trigger: TGGGGTGGACTCATTTCTTCATGGGTGTGTACAGAT...CCAGTCTGCGGTAAAATTTGTCTGTAGCCCACACAGCCTACACAAAGTAATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR GCA 90 bp | TATTCTGGGAGGTGGAGGCAGGAACACTCAGGGATTAAGACAAGGAAAGGAAAATCCTTTTACTTTTGGTaGTGGAGATGGAGCTCGGGA | + |
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Preference number: 2 (lower is better) Translates to: YSGRWRQEHSGIKTRKGKSFYFW*WRWSSG Trigger: TCCCGAGCTCCATCTCCAGCACCAAAAGTAAAAGGA...TTTTCCTTTCCTTGTCTTAATCCCTGAGTGTTCCTGCCTCCACCTCCCAGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR CCA 90 bp | CCTATTACTTTGTGTAGGCTGTGTGGGCTACAGACAAATTTTACCGCAGACTGGCAAGCAGAAGTGATTTaGAAAGCAGGGTTTGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: PITLCRLCGLQTNFTADWQAEVI*KAGFGA Trigger: AGCCCCAAACCCTGCTTTCCAAATCACTTCTGCTTG...CCAGTCTGCGGTAAAATTTGTCTGTAGCCCACACAGCCTACACAAAGTAATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR CCA 90 bp | ATCAATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCGTTGCCCTTCCCCTTTaGAAGCTCGCCTGGCACCTT | + |
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Preference number: 2 (lower is better) Translates to: INVNRNLNLCCCGLKTECVALPL*KLAWHL Trigger: AAGGTGCCAGGCGAGCTTCCAAAGGGGAAGGGCAAC...GCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR TCA 90 bp | ACCCATACAAACCCCAATTTCCATACAAACCTAGTTATGGGAAAGATGGCTGCCTCTCGCAAGCAGAAGTaGTTTGGAAAGCAGGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: THTNPNFHTNLVMGKMAASRKQK*FGKQGL Trigger: CAAACCCTGCTTTCCAAATCACTTCTGCTTGCGAGA...GGCAGCCATCTTTCCCATAACTAGGTTTGTATGGAAATTGGGGTTTGTATGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGCACTTTCAGGTCAGTTCCAGCTCAGGGGTCTTTGGCCTCTTTCTAAAGTAATAGCTCCAGCTCCATaGTGTATAAAATACCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: CALSGQFQLRGLWPLSKVIAPAP*CIKYPD Trigger: GTCTGGGTATTTTATACAGCATGGAGCTGGAGCTAT...TACTTTAGAAAGAGGCCAAAGACCCCTGAGCTGGAACTGACCTGAAAGTGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR CCA 90 bp | ATCAATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCTTTTGGTGCTGGAGATaGAGCTCGGGACTCCCACAC | + |
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Preference number: 2 (lower is better) Translates to: INVNRNLNLCCCGLKTECFWCWR*SSGLPH Trigger: GTGTGGGAGTCCCGAGCTCCATCTCCAGCACCAAAA...GCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR TCA 90 bp | CCTATTACTTTGTGTAGGCTGTGTGGGCTACAGACAAATTTTACCGCAGACTGGCTATATACATATTGCTaGGAATGTTGCTCAGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: PITLCRLCGLQTNFTADWLYTYC*ECCSGC Trigger: GCAGCCTGAGCAACATTCTCAGCAATATGTATATAG...CCAGTCTGCGGTAAAATTTGTCTGTAGCCCACACAGCCTACACAAAGTAATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR TCA 90 bp | AATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCTTGCTCTTCCTCACAGTCTaGGGCTCTACATGGTACTCC | + |
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Preference number: 2 (lower is better) Translates to: NVNRNLNLCCCGLKTECLLFLTV*GSTWYS Trigger: GGAGTACCATGTAGAGCCTCAGACTGTGAGGAAGAG...CAAGCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR-3UTR GCA 90 bp | TATTCTGGGAGGTGGAGGCAGGAACACTCAGGGATTAAGACAAGGAAAGGAAAAATAGCTCCAGCTCCATaGTGTATAAAATACCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: YSGRWRQEHSGIKTRKGKIAPAP*CIKYPD Trigger: GTCTGGGTATTTTATACAGCATGGAGCTGGAGCTAT...TTTTCCTTTCCTTGTCTTAATCCCTGAGTGTTCCTGCCTCCACCTCCCAGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR CCA 90 bp | ATAATCATTCAAGGAAAAGAAACCATGAACTCGAGAGGTAGAAAGATGGGAAGGCACACTGGTGTATTCTaGGAGGTGGAGGCAGGAACA | + |
|
Preference number: 2 (lower is better) Translates to: IIIQGKETMNSRGRKMGRHTGVF*EVEAGT Trigger: TGTTCCTGCCTCCACCTCCCAGAATACACCAGTGTG...CCTTCCCATCTTTCTACCTCTCGAGTTCATGGTTTCTTTTCCTTGAATGATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR TCA 90 bp | CTAGGTTCAACCTCTAAACCCTCTAAACCCACCCCTCAAACAGAATTTAATCCATTTAGGAATGCATTTTaGGAGTGCCAGCTGATAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LGSTSKPSKPTPQTEFNPFRNAF*ECQLIA Trigger: GGCTATCAGCTGGCACTCTCAAAATGCATTCCTAAA...TGGATTAAATTCTGTTTGAGGGGTGGGTTTAGAGGGTTTAGAGGTTGAACCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR GCA 90 bp | AATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCTTGCAGTGTACACATCCCTaGTCTTCCTCACAGTCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: NVNRNLNLCCCGLKTECLQCTHP*SSSQSE Trigger: CTCAGACTGTGAGGAAGAGCAGGGATGTGTACACTG...CAAGCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR CCA 90 bp | ATCAATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCTATAGGTGGGATAGCTaGGTCGGACTATTGGTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: INVNRNLNLCCCGLKTECYRWDS*VGLLVA Trigger: GGCAACCAATAGTCCGACCCAGCTATCCCACCTATA...GCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR CCA 90 bp | AATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCTTGTATAGGTGGGATAGCTaGGTCGGACTATTGGTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: NVNRNLNLCCCGLKTECLYRWDS*VGLLVA Trigger: GGCAACCAATAGTCCGACCCAGCTATCCCACCTATA...CAAGCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR TCA 90 bp | CTAGGTTCAACCTCTAAACCCTCTAAACCCACCCCTCAAACAGAATTTAATCCATTGGAAGGCAGTCTTTaGGATCAGCTCAGTATACTT | + |
|
Preference number: 2 (lower is better) Translates to: LGSTSKPSKPTPQTEFNPLEGSL*DQLSIL Trigger: AAGTATACTGAGCTGATCTCAAAGACTGCCTTCCAA...TGGATTAAATTCTGTTTGAGGGGTGGGTTTAGAGGGTTTAGAGGTTGAACCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR TCA 90 bp | ATCAATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCTTTAGGAATGCATTTTaGGAGTGCCAGCTGATAGCC | + |
|
Preference number: 2 (lower is better) Translates to: INVNRNLNLCCCGLKTECFRNAF*ECQLIA Trigger: GGCTATCAGCTGGCACTCTCAAAATGCATTCCTAAA...GCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR TCA 90 bp | ATAATCATTCAAGGAAAAGAAACCATGAACTCGAGAGGTAGAAAGATGGGAAGGCAGCTGATGGTTTGCTaGGTTTCCACTGTAGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: IIIQGKETMNSRGRKMGRQLMVC*VSTVVN Trigger: ATTCACTACAGTGGAAACTCAGCAAACCATCAGCTG...CCTTCCCATCTTTCTACCTCTCGAGTTCATGGTTTCTTTTCCTTGAATGATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR TCA 90 bp | CTAGGTTCAACCTCTAAACCCTCTAAACCCACCCCTCAAACAGAATTTAATCCAGTACTGCTCAGATTTTaGGAGCAAACAGTTAGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: LGSTSKPSKPTPQTEFNPVLLRF*EQTVSK Trigger: TTTACTAACTGTTTGCTCTCAAAATCTGAGCAGTAC...TGGATTAAATTCTGTTTGAGGGGTGGGTTTAGAGGGTTTAGAGGTTGAACCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR TCA 90 bp | ATCAATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCGTATGTACAGAATGGTaGATGCCTTTAGAGTCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: INVNRNLNLCCCGLKTECVCTEW*MPLESH Trigger: ATGGGACTCTAAAGGCATTCACCATTCTGTACATAC...GCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR CCA 90 bp | ATCAATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCTGCTGGTTTTCCATGTaGTTTATAGGTGGGATAGCT | + |
|
Preference number: 2 (lower is better) Translates to: INVNRNLNLCCCGLKTECCWFSM*FIGGIA Trigger: AGCTATCCCACCTATAAACCACATGGAAAACCAGCA...GCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR TCA 90 bp | ATAATCATTCAAGGAAAAGAAACCATGAACTCGAGAGGTAGAAAGATGGGAAGGGAAATCTTTGTAGACTaGATTATCTCTAACCCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: IIIQGKETMNSRGRKMGREIFVD*IISNPS Trigger: GCTGGGGTTAGAGATAATTCAGTCTACAAAGATTTC...CCTTCCCATCTTTCTACCTCTCGAGTTCATGGTTTCTTTTCCTTGAATGATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR TCA 90 bp | AATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCTTGGTACTGCTCAGATTTTaGGAGCAAACAGTTAGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: NVNRNLNLCCCGLKTECLVLLRF*EQTVSK Trigger: TTTACTAACTGTTTGCTCTCAAAATCTGAGCAGTAC...CAAGCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR GCA 90 bp | ATCAATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCGAATGTTGCTCAGGCTaGTTTGATTATGATAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: INVNRNLNLCCCGLKTECECCSG*FDYDKE Trigger: TTCTTTATCATAATCAAAGCAGCCTGAGCAACATTC...GCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR CCA 72 bp | GGAGGCCCTGGGTCCCATCACCAGCACTGCACACACTaGTGTATTCTGGGAGGTGGAGGCAGGAACACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GGPGSHHQHCTH*CILGGGGRNTQ Trigger: CTGAGTGTTCCTGCCTCCACCTCCCAGAATACACCAGTGTGTGCAGTGCTGGTGATGGGACCCAGGGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR CCA 72 bp | GGTGAAGGTGTTTCCTTTTACTTTTGGTGCTGGAGATaGAGCTCGGGACTCCCACACACGAAGCACGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: GEGVSFYFWCWR*SSGLPHTKHGF Trigger: GAACCCGTGCTTCGTGTGTGGGAGTCCCGAGCTCCATCTCCAGCACCAAAAGTAAAAGGAAACACCTTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR TCA 72 bp | CTCGGGACTCCCACACACGAAGCACGGGTTCTCCCATaGCCTATAGCTCCAGCTCCATGCTGTATAAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: LGTPTHEARVLP*PIAPAPCCIKY Trigger: GTATTTTATACAGCATGGAGCTGGAGCTATAGGTCATGGGAGAACCCGTGCTTCGTGTGTGGGAGTCCCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR TCA 72 bp | GTGGCAGTGTACACATCCCTGCTCTTCCTCACAGTCTaGGGCTCTACATGGTACTCCAGCGTCATAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: VAVYTSLLFLTV*GSTWYSSVIEQ Trigger: CTGTTCTATGACGCTGGAGTACCATGTAGAGCCTCAGACTGTGAGGAAGAGCAGGGATGTGTACACTGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCAGGGGTTAGAACACTCGTGTACCATGAGCATGGCTCTAGGTTCAACCTCGCAAGCAGAAGTGATTaGGAAAGCAGGGTTTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SSGVRTLVYHEHGSRFNLASRSD*ESRVWG Trigger: GCCCCAAACCCTGCTTTCCAAATCACTTCTGCTTGC...GAGGTTGAACCTAGAGCCATGCTCATGGTACACGAGTGTTCTAACCCCTGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR CCA 72 bp | TCACCAGCACTGCACACACTGGTGTATTCTGGGAGGTaGAGGCAGGAACACTCAGGGATTAAGACAAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SPALHTLVYSGR*RQEHSGIKTRK Trigger: TTTCCTTGTCTTAATCCCTGAGTGTTCCTGCCTCCACCTCCCAGAATACACCAGTGTGTGCAGTGCTGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR GCA 72 bp | GCTCAGTATACTTTGTGGTGGCAGTGTACACATCCCTaGTCTTCCTCACAGTCTGAGGCTCTACATGGTACT | + |
|
Preference number: 3 (lower is better) Translates to: AQYTLWWQCTHP*SSSQSEALHGT Trigger: AGTACCATGTAGAGCCTCAGACTGTGAGGAAGAGCAGGGATGTGTACACTGCCACCACAAAGTATACTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR CCA 72 bp | GTTCTCGCAAGCAGAAGTGATTTGGAAAGCAGGGTTTaGGGCTTAGGATGTAGCTCAGTTGGCAGAGTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: VLASRSDLESRV*GLGCSSVGRVL Trigger: TAGCACTCTGCCAACTGAGCTACATCCTAAGCCCCAAACCCTGCTTTCCAAATCACTTCTGCTTGCGAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTATTACTTTGTGTAGGCTGTGTGGGCTACAGACAAATTTTACCGCAGACTGGGCAAGCAGAAGTGATTaGGAAAGCAGGGTTTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: PITLCRLCGLQTNFTADWASRSD*ESRVWG Trigger: GCCCCAAACCCTGCTTTCCAAATCACTTCTGCTTGC...CCAGTCTGCGGTAAAATTTGTCTGTAGCCCACACAGCCTACACAAAGTAATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR TCA 72 bp | CTTTCAGCACCTCCCTTCCCTTTGGAAGGCAGTCTTTaGGATCAGCTCAGTATACTTTGTGGTGGCAGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LSAPPFPLEGSL*DQLSILCGGSV Trigger: TACACTGCCACCACAAAGTATACTGAGCTGATCTCAAAGACTGCCTTCCAAAGGGAAGGGAGGTGCTGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR TCA 72 bp | TATCACGAGTTAAGACTGTATCTGCCTCACTCACAGTaGGATCTCCAGGGGTCTAGGAAAGAGTCCTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: YHELRLYLPHSQ*DLQGSRKESSV Trigger: CACTGAGGACTCTTTCCTAGACCCCTGGAGATCTCACTGTGAGTGAGGCAGATACAGTCTTAACTCGTGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR CCA 72 bp | AGGCAGTCTTTGAGATCAGCTCAGTATACTTTGTGGTaGCAGTGTACACATCCCTGCTCTTCCTCACAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: RQSLRSAQYTLW*QCTHPCSSSQS Trigger: AGACTGTGAGGAAGAGCAGGGATGTGTACACTGCCACCACAAAGTATACTGAGCTGATCTCAAAGACTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTATTACTTTGTGTAGGCTGTGTGGGCTACAGACAAATTTTACCGCAGACTGGACCCCAGCTGATGGTTaGCTGAGTTTCCACTGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: PITLCRLCGLQTNFTADWTPADG*LSFHCS Trigger: ACTACAGTGGAAACTCAGCAAACCATCAGCTGGGGT...CCAGTCTGCGGTAAAATTTGTCTGTAGCCCACACAGCCTACACAAAGTAATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCAGGGGTTAGAACACTCGTGTACCATGAGCATGGCTCTAGGTTCAACCTCTTGCCTATATACATATaGCTGAGAATGTTGCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSGVRTLVYHEHGSRFNLLPIYI*LRMLLR Trigger: CCTGAGCAACATTCTCAGCAATATGTATATAGGCAA...GAGGTTGAACCTAGAGCCATGCTCATGGTACACGAGTGTTCTAACCCCTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCTCTTCCTCACAGTCTGAGGCTCTACATGGTACTCCAGCGTCATAGAACATTGCCTATATACATATaGCTGAGAATGTTGCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PALPHSLRLYMVLQRHRTLPIYI*LRMLLR Trigger: CCTGAGCAACATTCTCAGCAATATGTATATAGGCAA...TGTTCTATGACGCTGGAGTACCATGTAGAGCCTCAGACTGTGAGGAAGAGCAGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR GCA 72 bp | ATATTTACAGGTGAAGGTGTTTCCTTTTACTTTTGGTaGTGGAGATGGAGCTCGGGACTCCCACACACGAAG | + |
|
Preference number: 3 (lower is better) Translates to: IFTGEGVSFYFW*WRWSSGLPHTK Trigger: CTTCGTGTGTGGGAGTCCCGAGCTCCATCTCCAGCACCAAAAGTAAAAGGAAACACCTTCACCTGTAAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR CCA 72 bp | GAAATATTTACAGGTGAAGGTGTTTCCTTTTACTTTTaGTGCTGGAGATGGAGCTCGGGACTCCCACACACG | + |
|
Preference number: 3 (lower is better) Translates to: EIFTGEGVSFYF*CWRWSSGLPHT Trigger: CGTGTGTGGGAGTCCCGAGCTCCATCTCCAGCACCAAAAGTAAAAGGAAACACCTTCACCTGTAAATATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR CAA 90 bp | TATTCTGGGAGGTGGAGGCAGGAACACTCAGGGATTAAGACAAGGAAAGGAAAATGTTTCCTTTTACTTTaGGTGCTGGAGATGGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: YSGRWRQEHSGIKTRKGKCFLLL*VLEMEL Trigger: GAGCTCCATCTCCAGCACCAAAAGTAAAAGGAAACA...TTTTCCTTTCCTTGTCTTAATCCCTGAGTGTTCCTGCCTCCACCTCCCAGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTATTACTTTGTGTAGGCTGTGTGGGCTACAGACAAATTTTACCGCAGACTGGTGTTTCCTTTTACTTTaGGTGCTGGAGATGGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PITLCRLCGLQTNFTADWCFLLL*VLEMEL Trigger: GAGCTCCATCTCCAGCACCAAAAGTAAAAGGAAACA...CCAGTCTGCGGTAAAATTTGTCTGTAGCCCACACAGCCTACACAAAGTAATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCACTTTCAGGTCAGTTCCAGCTCAGGGGTCTTTGGCCTCTTTCTAAAGTAATTAATTCTGCCTTTTaGTTAACTACTGCCTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: CALSGQFQLRGLWPLSKVINSAF*LTTALP Trigger: AGGCAAGGCAGTAGTTAACAAAAAGGCAGAATTAAT...TACTTTAGAAAGAGGCCAAAGACCCCTGAGCTGGAACTGACCTGAAAGTGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR CAA 90 bp | ATAATCATTCAAGGAAAAGAAACCATGAACTCGAGAGGTAGAAAGATGGGAAGGACCCCAGCTGATGGTTaGCTGAGTTTCCACTGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: IIIQGKETMNSRGRKMGRTPADG*LSFHCS Trigger: ACTACAGTGGAAACTCAGCAAACCATCAGCTGGGGT...CCTTCCCATCTTTCTACCTCTCGAGTTCATGGTTTCTTTTCCTTGAATGATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCCATACAAACCCCAATTTCCATACAAACCTAGTTATGGGAAAGATGGCTGCCAGTAAAATCTGTACATaGAGCTACATGAAGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: THTNPNFHTNLVMGKMAASKICT*SYMKLG Trigger: ACCCAGCTTCATGTAGCTCAATGTACAGATTTTACT...GGCAGCCATCTTTCCCATAACTAGGTTTGTATGGAAATTGGGGTTTGTATGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR TCA 72 bp | AGGCTGACTTTAGCCTTAAATGGGGCTGTTAAGAGATaGGAAACCCATACAAACCCCAATTTCCATACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: RLTLALNGAVKR*ETHTNPNFHTN Trigger: GTTTGTATGGAAATTGGGGTTTGTATGGGTTTCTCATCTCTTAACAGCCCCATTTAAGGCTAAAGTCAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCCATACAAACCCCAATTTCCATACAAACCTAGTTATGGGAAAGATGGCTGCCATTAATTCTGCCTTTTaGTTAACTACTGCCTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: THTNPNFHTNLVMGKMAAINSAF*LTTALP Trigger: AGGCAAGGCAGTAGTTAACAAAAAGGCAGAATTAAT...GGCAGCCATCTTTCCCATAACTAGGTTTGTATGGAAATTGGGGTTTGTATGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR CAA 90 bp | ATAATCATTCAAGGAAAAGAAACCATGAACTCGAGAGGTAGAAAGATGGGAAGGAGTAAAATCTGTACATaGAGCTACATGAAGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: IIIQGKETMNSRGRKMGRSKICT*SYMKLG Trigger: ACCCAGCTTCATGTAGCTCAATGTACAGATTTTACT...CCTTCCCATCTTTCTACCTCTCGAGTTCATGGTTTCTTTTCCTTGAATGATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR-3UTR CAA 90 bp | AATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCTTGTTGTTAACTACTGCCTaGCCTATATACATATTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: NVNRNLNLCCCGLKTECLLLTTA*PIYILL Trigger: CAGCAATATGTATATAGGCAAGGCAGTAGTTAACAA...CAAGCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR TCA 72 bp | AAACAGAATTTAATCCAAAAATTTAGGAATGCATTTTaGGAGTGCCAGCTGATAGCCTGCTGTTTCTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KQNLIQKFRNAF*ECQLIACCFFQ Trigger: CTGAAAGAAACAGCAGGCTATCAGCTGGCACTCTCAAAATGCATTCCTAAATTTTTGGATTAAATTCTGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR TCA 90 bp | GGCCCTGGGTCCCATCACCAGCACTGCACACACTGGTGTATTCTGGGAGGTGGACAGCTTCGGGCCTCCTaGGTTGTGTGCAAGGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: GPGSHHQHCTHWCILGGGQLRAS*VVCKDN Trigger: GTTATCCTTGCACACAACTCAGGAGGCCCGAAGCTG...TCCACCTCCCAGAATACACCAGTGTGTGCAGTGCTGGTGATGGGACCCAGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR TCA 90 bp | GGCCCTGGGTCCCATCACCAGCACTGCACACACTGGTGTATTCTGGGAGGTGGAGAAGGCGTATCCCATTaGGTCGATGTAAACATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPGSHHQHCTHWCILGGGEGVSH*VDVNIR Trigger: CCTGATGTTTACATCGACTCAATGGGATACGCCTTC...TCCACCTCCCAGAATACACCAGTGTGTGCAGTGCTGGTGATGGGACCCAGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR CAA 72 bp | TGGTTTATAGGTGGGATAGCTGGGTCGGACTATTGGTaGCCCTTCCCCTTTGGAAGCTCGCCTGGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WFIGGIAGSDYW*PFPFGSSPGTF Trigger: GAAGGTGCCAGGCGAGCTTCCAAAGGGGAAGGGCAACCAATAGTCCGACCCAGCTATCCCACCTATAAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR CAA 72 bp | CATGTGGTTTATAGGTGGGATAGCTGGGTCGGACTATaGGTTGCCCTTCCCCTTTGGAAGCTCGCCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HVVYRWDSWVGL*VALPLWKLAWH Trigger: GTGCCAGGCGAGCTTCCAAAGGGGAAGGGCAACCAATAGTCCGACCCAGCTATCCCACCTATAAACCACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR TCA 90 bp | GGCCCTGGGTCCCATCACCAGCACTGCACACACTGGTGTATTCTGGGAGGTGGAGATTCTTTTCAGGTCTaGACTGGCCAATGGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: GPGSHHQHCTHWCILGGGDSFQV*TGQWKP Trigger: TGGTTTCCATTGGCCAGTTCAGACCTGAAAAGAATC...TCCACCTCCCAGAATACACCAGTGTGTGCAGTGCTGGTGATGGGACCCAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR GCA 90 bp | AGCTCAGGGGTTAGAACACTCGTGTACCATGAGCATGGCTCTAGGTTCAACCTCACATCAGGAACGCGCTaGATCAGAGCTTCCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSGVRTLVYHEHGSRFNLTSGTR*IRASQP Trigger: CGGCTGGGAAGCTCTGATGCAGCGCGTTCCTGATGT...GAGGTTGAACCTAGAGCCATGCTCATGGTACACGAGTGTTCTAACCCCTGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR GCA 90 bp | TATTCTGGGAGGTGGAGGCAGGAACACTCAGGGATTAAGACAAGGAAAGGAAAAACATCAGGAACGCGCTaGATCAGAGCTTCCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YSGRWRQEHSGIKTRKGKTSGTR*IRASQP Trigger: CGGCTGGGAAGCTCTGATGCAGCGCGTTCCTGATGT...TTTTCCTTTCCTTGTCTTAATCCCTGAGTGTTCCTGCCTCCACCTCCCAGAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR GCA 90 bp | GGCCCTGGGTCCCATCACCAGCACTGCACACACTGGTGTATTCTGGGAGGTGGAGTAATAGATGAGCTTTaGTTTGCTGAGAAGAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GPGSHHQHCTHWCILGGGVIDEL*FAEKSI Trigger: AATGCTCTTCTCAGCAAAGCAAAGCTCATCTATTAC...TCCACCTCCCAGAATACACCAGTGTGTGCAGTGCTGGTGATGGGACCCAGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR GCA 90 bp | AGCTCAGGGGTTAGAACACTCGTGTACCATGAGCATGGCTCTAGGTTCAACCTCATGGAAACCAGCAAATaGCCTGGGGTCACCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSGVRTLVYHEHGSRFNLMETSK*PGVTFF Trigger: GAAGAAGGTGACCCCAGGGCATTTGCTGGTTTCCAT...GAGGTTGAACCTAGAGCCATGCTCATGGTACACGAGTGTTCTAACCCCTGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR CCA 90 bp | AGCTCAGGGGTTAGAACACTCGTGTACCATGAGCATGGCTCTAGGTTCAACCTCCCCAGCCGAGAAGAATaGATCCAAGACTTTGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSGVRTLVYHEHGSRFNLPSREE*IQDFGL Trigger: TAGGCCAAAGTCTTGGATCCATTCTTCTCGGCTGGG...GAGGTTGAACCTAGAGCCATGCTCATGGTACACGAGTGTTCTAACCCCTGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR TCA 90 bp | AGCTCAGGGGTTAGAACACTCGTGTACCATGAGCATGGCTCTAGGTTCAACCTCGTTATCTGTCCTTCATaGGGAATGACAATGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSGVRTLVYHEHGSRFNLVICPS*GMTMSS Trigger: GCTGGACATTGTCATTCCTCATGAAGGACAGATAAC...GAGGTTGAACCTAGAGCCATGCTCATGGTACACGAGTGTTCTAACCCCTGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR GCA 90 bp | TGTGCACTTTCAGGTCAGTTCCAGCTCAGGGGTCTTTGGCCTCTTTCTAAAGTAATGGAAACCAGCAAATaGCCTGGGGTCACCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CALSGQFQLRGLWPLSKVMETSK*PGVTFF Trigger: GAAGAAGGTGACCCCAGGGCATTTGCTGGTTTCCAT...TACTTTAGAAAGAGGCCAAAGACCCCTGAGCTGGAACTGACCTGAAAGTGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR CAA 72 bp | TCTTTCAGCACCTCCCTTCCCTTTGGAAGGCAGTCTTaGAGATCAGCTCAGTATACTTTGTGGTGGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFSTSLPFGRQS*RSAQYTLWWQC Trigger: ACACTGCCACCACAAAGTATACTGAGCTGATCTCAAAGACTGCCTTCCAAAGGGAAGGGAGGTGCTGAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR GCA 90 bp | AGCTCAGGGGTTAGAACACTCGTGTACCATGAGCATGGCTCTAGGTTCAACCTCTTGGAGTCTCTCTTCTaGAGACAGAGAAAGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGVRTLVYHEHGSRFNLLESLF*RQRKNV Trigger: CACATTCTTTCTCTGTCTGCAGAAGAGAGACTCCAA...GAGGTTGAACCTAGAGCCATGCTCATGGTACACGAGTGTTCTAACCCCTGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR CCA 90 bp | TATTCTGGGAGGTGGAGGCAGGAACACTCAGGGATTAAGACAAGGAAAGGAAAACCCAGCCGAGAAGAATaGATCCAAGACTTTGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: YSGRWRQEHSGIKTRKGKPSREE*IQDFGL Trigger: TAGGCCAAAGTCTTGGATCCATTCTTCTCGGCTGGG...TTTTCCTTTCCTTGTCTTAATCCCTGAGTGTTCCTGCCTCCACCTCCCAGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR TCA 90 bp | TATTCTGGGAGGTGGAGGCAGGAACACTCAGGGATTAAGACAAGGAAAGGAAAATTTGGCCTAGCAATGTaGAGTGAGGATACCGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YSGRWRQEHSGIKTRKGKFGLAM*SEDTGN Trigger: ATTCCCGGTATCCTCACTTCACATTGCTAGGCCAAA...TTTTCCTTTCCTTGTCTTAATCCCTGAGTGTTCCTGCCTCCACCTCCCAGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR GCA 90 bp | CCTGCTCTTCCTCACAGTCTGAGGCTCTACATGGTACTCCAGCGTCATAGAACAACTCCAATCCCAAAATaGTCATTCCACATAGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: PALPHSLRLYMVLQRHRTTPIPK*SFHIVC Trigger: GCATACTATGTGGAATGAGCATTTTGGGATTGGAGT...TGTTCTATGACGCTGGAGTACCATGTAGAGCCTCAGACTGTGAGGAAGAGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR CAA 72 bp | TTTGGAAGGCAGTCTTTGAGATCAGCTCAGTATACTTaGTGGTGGCAGTGTACACATCCCTGCTCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FGRQSLRSAQYT*WWQCTHPCSSS Trigger: TGAGGAAGAGCAGGGATGTGTACACTGCCACCACAAAGTATACTGAGCTGATCTCAAAGACTGCCTTCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| 3UTR CAA 72 bp | ACCAACCAACCAGCTGGAAGAGACAGTGTGCCTCTTTaGTATGCTCTAACACCAATGTCAAACAGTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TNQPAGRDSVPL*YALTPMSNSVG Trigger: ACCCACACTGTTTGACATTGGTGTTAGAGCATACAAAAGAGGCACACTGTCTCTTCCAGCTGGTTGGTTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR TCA 90 bp | AATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCTTGCAGCTTCGGGCCTCCTaGGTTGTGTGCAAGGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: NVNRNLNLCCCGLKTECLQLRAS*VVCKDN Trigger: GTTATCCTTGCACACAACTCAGGAGGCCCGAAGCTG...CAAGCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR TCA 90 bp | CCTATTACTTTGTGTAGGCTGTGTGGGCTACAGACAAATTTTACCGCAGACTGGGTTATCTGTCCTTCATaGGGAATGACAATGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PITLCRLCGLQTNFTADWVICPS*GMTMSS Trigger: GCTGGACATTGTCATTCCTCATGAAGGACAGATAAC...CCAGTCTGCGGTAAAATTTGTCTGTAGCCCACACAGCCTACACAAAGTAATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR GCA 90 bp | CTAGGTTCAACCTCTAAACCCTCTAAACCCACCCCTCAAACAGAATTTAATCCACTCTCCTCCGCCACCTaGATTACAGTATGGATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGSTSKPSKPTPQTEFNPLSSAT*ITVWME Trigger: TTCCATCCATACTGTAATGCAGGTGGCGGAGGAGAG...TGGATTAAATTCTGTTTGAGGGGTGGGTTTAGAGGGTTTAGAGGTTGAACCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR GCA 90 bp | AAAGCAATAGGCTCTATGCTTTGGGGAGTCTCCTGGACAACCCTGGGCAATAAATTGGAGTCTCTCTTCTaGAGACAGAGAAAGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: KAIGSMLWGVSWTTLGNKLESLF*RQRKNV Trigger: CACATTCTTTCTCTGTCTGCAGAAGAGAGACTCCAA...TTTATTGCCCAGGGTTGTCCAGGAGACTCCCCAAAGCATAGAGCCTATTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR CCA 90 bp | AAAGCAATAGGCTCTATGCTTTGGGGAGTCTCCTGGACAACCCTGGGCAATAAACTGCACATCACAAGGTaGATAGACAATGTTAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KAIGSMLWGVSWTTLGNKLHITR*IDNVSA Trigger: TGCACTAACATTGTCTATCCACCTTGTGATGTGCAG...TTTATTGCCCAGGGTTGTCCAGGAGACTCCCCAAAGCATAGAGCCTATTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR CCA 90 bp | TGTGCACTTTCAGGTCAGTTCCAGCTCAGGGGTCTTTGGCCTCTTTCTAAAGTACTGCACATCACAAGGTaGATAGACAATGTTAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CALSGQFQLRGLWPLSKVLHITR*IDNVSA Trigger: TGCACTAACATTGTCTATCCACCTTGTGATGTGCAG...TACTTTAGAAAGAGGCCAAAGACCCCTGAGCTGGAACTGACCTGAAAGTGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR CCA 90 bp | CTAGGTTCAACCTCTAAACCCTCTAAACCCACCCCTCAAACAGAATTTAATCCAAACCAGCAAATGCCCTaGGGTCACCTTCTTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LGSTSKPSKPTPQTEFNPNQQMP*GHLLLM Trigger: CATGAGAAGAAGGTGACCCCAGGGCATTTGCTGGTT...TGGATTAAATTCTGTTTGAGGGGTGGGTTTAGAGGGTTTAGAGGTTGAACCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR TCA 90 bp | CTAGGTTCAACCTCTAAACCCTCTAAACCCACCCCTCAAACAGAATTTAATCCATTTGGCCTAGCAATGTaGAGTGAGGATACCGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGSTSKPSKPTPQTEFNPFGLAM*SEDTGN Trigger: ATTCCCGGTATCCTCACTTCACATTGCTAGGCCAAA...TGGATTAAATTCTGTTTGAGGGGTGGGTTTAGAGGGTTTAGAGGTTGAACCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR GCA 90 bp | TGTGCACTTTCAGGTCAGTTCCAGCTCAGGGGTCTTTGGCCTCTTTCTAAAGTAACTCCAATCCCAAAATaGTCATTCCACATAGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: CALSGQFQLRGLWPLSKVTPIPK*SFHIVC Trigger: GCATACTATGTGGAATGAGCATTTTGGGATTGGAGT...TACTTTAGAAAGAGGCCAAAGACCCCTGAGCTGGAACTGACCTGAAAGTGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR CCA 90 bp | TGTGCACTTTCAGGTCAGTTCCAGCTCAGGGGTCTTTGGCCTCTTTCTAAAGTAGCATTACAGTATGGATaGAAAAATGCAACCACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: CALSGQFQLRGLWPLSKVALQYG*KNATTV Trigger: AACGGTGGTTGCATTTTTCCATCCATACTGTAATGC...TACTTTAGAAAGAGGCCAAAGACCCCTGAGCTGGAACTGACCTGAAAGTGCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR CCA 90 bp | TGTGCACTTTCAGGTCAGTTCCAGCTCAGGGGTCTTTGGCCTCTTTCTAAAGTAACCTGCATTACAGTATaGATGGAAAAATGCAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: CALSGQFQLRGLWPLSKVTCITV*MEKCNH Trigger: GTGGTTGCATTTTTCCATCCATACTGTAATGCAGGT...TACTTTAGAAAGAGGCCAAAGACCCCTGAGCTGGAACTGACCTGAAAGTGCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR CCA 90 bp | TATTCTGGGAGGTGGAGGCAGGAACACTCAGGGATTAAGACAAGGAAAGGAAAAGAAAACAAACTGCACTaGGTGAGCCAACTTGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: YSGRWRQEHSGIKTRKGKENKLH*VSQLDV Trigger: AACATCAAGTTGGCTCACCCAGTGCAGTTTGTTTTC...TTTTCCTTTCCTTGTCTTAATCCCTGAGTGTTCCTGCCTCCACCTCCCAGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072572.13 |
||
| CDS-3UTR CCA 90 bp | TATTCTGGGAGGTGGAGGCAGGAACACTCAGGGATTAAGACAAGGAAAGGAAAAGCTACTTCAAACTCCTaGTCGGAGAATCTGCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: YSGRWRQEHSGIKTRKGKATSNS*SENLLI Trigger: TATAAGCAGATTCTCCGACCAGGAGTTTGAAGTAGC...TTTTCCTTTCCTTGTCTTAATCCCTGAGTGTTCCTGCCTCCACCTCCCAGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR GCA 90 bp | TATTCTGGGAGGTGGAGGCAGGAACACTCAGGGATTAAGACAAGGAAAGGAAAAGTTCTTTTCCATTTTTaGTGGTCGACACAGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YSGRWRQEHSGIKTRKGKVLFHF*WSTQTS Trigger: AGAAGTCTGTGTCGACCAGCAAAAATGGAAAAGAAC...TTTTCCTTTCCTTGTCTTAATCCCTGAGTGTTCCTGCCTCCACCTCCCAGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR GCA 90 bp | TGTGCACTTTCAGGTCAGTTCCAGCTCAGGGGTCTTTGGCCTCTTTCTAAAGTAGTATGGATGGAAAAATaGAACCACCGTTTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CALSGQFQLRGLWPLSKVVWMEK*NHRLFF Trigger: AAAGAACAAACGGTGGTTGCATTTTTCCATCCATAC...TACTTTAGAAAGAGGCCAAAGACCCCTGAGCTGGAACTGACCTGAAAGTGCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR GCA 90 bp | AAAGCAATAGGCTCTATGCTTTGGGGAGTCTCCTGGACAACCCTGGGCAATAAAGTAATAGATGAGCTTTaGTTTGCTGAGAAGAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: KAIGSMLWGVSWTTLGNKVIDEL*FAEKSI Trigger: AATGCTCTTCTCAGCAAAGCAAAGCTCATCTATTAC...TTTATTGCCCAGGGTTGTCCAGGAGACTCCCCAAAGCATAGAGCCTATTGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR GCA 90 bp | CTAGGTTCAACCTCTAAACCCTCTAAACCCACCCCTCAAACAGAATTTAATCCAACAATGTTAGTGCAATaGCCAACCTTCCACAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGSTSKPSKPTPQTEFNPTMLVQ*PTFHSE Trigger: CTCACTGTGGAAGGTTGGGCATTGCACTAACATTGT...TGGATTAAATTCTGTTTGAGGGGTGGGTTTAGAGGGTTTAGAGGTTGAACCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR CCA 90 bp | TATTCTGGGAGGTGGAGGCAGGAACACTCAGGGATTAAGACAAGGAAAGGAAAACTTTTCCATTTTTGCTaGTCGACACAGACTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YSGRWRQEHSGIKTRKGKLFHFC*STQTSS Trigger: AGAAGAAGTCTGTGTCGACCAGCAAAAATGGAAAAG...TTTTCCTTTCCTTGTCTTAATCCCTGAGTGTTCCTGCCTCCACCTCCCAGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR CCA 90 bp | CCTATTACTTTGTGTAGGCTGTGTGGGCTACAGACAAATTTTACCGCAGACTGGACCTGCATTACAGTATaGATGGAAAAATGCAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PITLCRLCGLQTNFTADWTCITV*MEKCNH Trigger: GTGGTTGCATTTTTCCATCCATACTGTAATGCAGGT...CCAGTCTGCGGTAAAATTTGTCTGTAGCCCACACAGCCTACACAAAGTAATAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR CCA 90 bp | ATCAATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCAACCAGCAAATGCCCTaGGGTCACCTTCTTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: INVNRNLNLCCCGLKTECNQQMP*GHLLLM Trigger: CATGAGAAGAAGGTGACCCCAGGGCATTTGCTGGTT...GCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR CCA 90 bp | TATTCTGGGAGGTGGAGGCAGGAACACTCAGGGATTAAGACAAGGAAAGGAAAAACAAGTTTAAGAGAATaGCCTAACTCAGCTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSGRWRQEHSGIKTRKGKTSLRE*PNSAAF Trigger: GAAAGCAGCTGAGTTAGGCCATTCTCTTAAACTTGT...TTTTCCTTTCCTTGTCTTAATCCCTGAGTGTTCCTGCCTCCACCTCCCAGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR CCA 90 bp | ACCCATACAAACCCCAATTTCCATACAAACCTAGTTATGGGAAAGATGGCTGCCGCTACTTCAAACTCCTaGTCGGAGAATCTGCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: THTNPNFHTNLVMGKMAAATSNS*SENLLI Trigger: TATAAGCAGATTCTCCGACCAGGAGTTTGAAGTAGC...GGCAGCCATCTTTCCCATAACTAGGTTTGTATGGAAATTGGGGTTTGTATGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR TCA 90 bp | ATAATCATTCAAGGAAAAGAAACCATGAACTCGAGAGGTAGAAAGATGGGAAGGGAAGGCGTATCCCATTaGGTCGATGTAAACATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IIIQGKETMNSRGRKMGREGVSH*VDVNIR Trigger: CCTGATGTTTACATCGACTCAATGGGATACGCCTTC...CCTTCCCATCTTTCTACCTCTCGAGTTCATGGTTTCTTTTCCTTGAATGATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR TCA 90 bp | AATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCTTGTCCAGGAAAGAAGAGTaGATAGAAAAACCGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NVNRNLNLCCCGLKTECLSRKEE*IEKPQH Trigger: GTGCTGCGGTTTTTCTATTCACTCTTCTTTCCTGGA...CAAGCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR TCA 90 bp | ATCAATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCGATTCTTTTCAGGTCTaGACTGGCCAATGGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: INVNRNLNLCCCGLKTECDSFQV*TGQWKP Trigger: TGGTTTCCATTGGCCAGTTCAGACCTGAAAAGAATC...GCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR GCA 90 bp | ATCAATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCGTTCTTTTCCATTTTTaGTGGTCGACACAGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: INVNRNLNLCCCGLKTECVLFHF*WSTQTS Trigger: AGAAGTCTGTGTCGACCAGCAAAAATGGAAAAGAAC...GCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR CCA 90 bp | ATAATCATTCAAGGAAAAGAAACCATGAACTCGAGAGGTAGAAAGATGGGAAGGCTTTTCCATTTTTGCTaGTCGACACAGACTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IIIQGKETMNSRGRKMGRLFHFC*STQTSS Trigger: AGAAGAAGTCTGTGTCGACCAGCAAAAATGGAAAAG...CCTTCCCATCTTTCTACCTCTCGAGTTCATGGTTTCTTTTCCTTGAATGATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
||
| CDS-3UTR CCA 90 bp | AATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCTTGACAAGTTTAAGAGAATaGCCTAACTCAGCTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NVNRNLNLCCCGLKTECLTSLRE*PNSAAF Trigger: GAAAGCAGCTGAGTTAGGCCATTCTCTTAAACTTGT...CAAGCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS-3UTR CCA 90 bp | CTAGGTTCAACCTCTAAACCCTCTAAACCCACCCCTCAAACAGAATTTAATCCAGATAGACTTCTCAGTTaGTTTACTCTAAACTCATCA | + |
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Preference number: 4 (lower is better) Translates to: LGSTSKPSKPTPQTEFNPDRLLS*FTLNSS Trigger: TGATGAGTTTAGAGTAAACCAACTGAGAAGTCTATC...TGGATTAAATTCTGTTTGAGGGGTGGGTTTAGAGGGTTTAGAGGTTGAACCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS-3UTR GCA 90 bp | AATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCTTGGTATGGATGGAAAAATaGAACCACCGTTTGTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: NVNRNLNLCCCGLKTECLVWMEK*NHRLFF Trigger: AAAGAACAAACGGTGGTTGCATTTTTCCATCCATAC...CAAGCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| 3UTR CAA 72 bp | ATACTTCACAGTTGTGTTATCAATGTAAACAGGAATTaGAACCTCTGCTGTTGTGGACTCAAAACTGAATGC | + |
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Preference number: 4 (lower is better) Translates to: ILHSCVINVNRN*NLCCCGLKTEC Trigger: GCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATTGATAACACAACTGTGAAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS-3UTR CCA 90 bp | ATCAATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCGATAGACTTCTCAGTTaGTTTACTCTAAACTCATCA | + |
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Preference number: 4 (lower is better) Translates to: INVNRNLNLCCCGLKTECDRLLS*FTLNSS Trigger: TGATGAGTTTAGAGTAAACCAACTGAGAAGTCTATC...GCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS TCA 90 bp | TATCTGTCCTTCATGAGGAATGACAATGTCCAGCTTCGGGCCTCCTaGGTTGTGTGCAAGGATAACTGTGCCAGCTGCCATACACTCGAC | + |
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Preference number: 5 (lower is better) Translates to: YLSFMRNDNVQLRAS*VVCKDNCASCHTLD Trigger: GTCGAGTGTATGGCAGCTGGCACAGTTATCCTTGCACACAACTCAGGAGGCCCGAAGCTGGACATTGTCATTCCTCATGAAGGACAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS TCA 90 bp | ACCTCCCACATACTTAAAGAGAGGGAGTGTGAAGGCGTATCCCATTaGGTCGATGTAAACATCAGGAACGCGCTGCATCAGAGCTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: TSHILKERECEGVSH*VDVNIRNALHQSFP Trigger: TGGGAAGCTCTGATGCAGCGCGTTCCTGATGTTTACATCGACTCAATGGGATACGCCTTCACACTCCCTCTCTTTAAGTATGTGGGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 ENSMUST00000131624.2 |
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| CDS TCA 90 bp | CTTCCCAGCCGAGAAGAATGGATCCAAGACTTTGGCCTAGCAATGTaGAGTGAGGATACCGGGAATCTTCCACAAGGTAGCGTTTCCTTA | + |
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Preference number: 5 (lower is better) Translates to: LPSREEWIQDFGLAM*SEDTGNLPQGSVSL Trigger: TAAGGAAACGCTACCTTGTGGAAGATTCCCGGTATCCTCACTTCACATTGCTAGGCCAAAGTCTTGGATCCATTCTTCTCGGCTGGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000131624.2 |
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| CDS GCA 90 bp | CAGGGCTCTCAAAGCACACCACAGAACTCTCTCTCCTCCGCCACCTaGATTACAGTATGGATGGAAAAATGCAACCACCGTTTGTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: QGSQSTPQNSLSSAT*ITVWMEKCNHRLFF Trigger: AAAGAACAAACGGTGGTTGCATTTTTCCATCCATACTGTAATGCAGGTGGCGGAGGAGAGAGAGTTCTGTGGTGTGCTTTGAGAGCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS GCA 90 bp | CTGTTGACCACTGACATTAATGTCACCAGTATATACAACATAAACTaGTTCAGGATACCGCAGCACGGCGTACACGCACCAGCTCCCAGN | + |
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Preference number: 5 (lower is better) Translates to: LLTTDINVTSIYNIN*FRIPQHGVHAPAPX Trigger: NCTGGGAGCTGGTGCGTGTACGCCGTGCTGCGGTATCCTGAAGCAGTTTATGTTGTATATACTGGTGACATTAATGTCAGTGGTCAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131624.2 |
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| CDS-3UTR CAA 90 bp | CCTATTACTTTGTGTAGGCTGTGTGGGCTACAGACAAATTTTACCGCAGACTGGTTCGGGCCTCCTGAGTaGTGTGCAAGGATAACTGTG | + |
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Preference number: 5 (lower is better) Translates to: PITLCRLCGLQTNFTADWFGPPE*CARITV Trigger: CACAGTTATCCTTGCACACAACTCAGGAGGCCCGAA...CCAGTCTGCGGTAAAATTTGTCTGTAGCCCACACAGCCTACACAAAGTAATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS TCA 90 bp | CTTCCCAGCCGAGAAGAATGGATCCAAGACTTTGGCCTAGCAATGTaGAGTGAGGATACCGGGAATCTTCCACAAGGTAGCGTTTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: LPSREEWIQDFGLAM*SEDTGNLPQGSVSF Trigger: AAAAGAAACGCTACCTTGTGGAAGATTCCCGGTATCCTCACTTCACATTGCTAGGCCAAAGTCTTGGATCCATTCTTCTCGGCTGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110737.3 |
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| CDS-3UTR CAA 90 bp | CCTGCTCTTCCTCACAGTCTGAGGCTCTACATGGTACTCCAGCGTCATAGAACATGTTCTTTTCCATTTTaGCTGGTCGACACAGACTTC | + |
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Preference number: 5 (lower is better) Translates to: PALPHSLRLYMVLQRHRTCSFPF*LVDTDF Trigger: GAAGTCTGTGTCGACCAGCAAAAATGGAAAAGAACA...TGTTCTATGACGCTGGAGTACCATGTAGAGCCTCAGACTGTGAGGAAGAGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS-3UTR CAA 90 bp | TGTGCACTTTCAGGTCAGTTCCAGCTCAGGGGTCTTTGGCCTCTTTCTAAAGTAAGCATTCTTCCTGATTaGGAGTCTCTCTTCTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: CALSGQFQLRGLWPLSKVSILPD*ESLFCR Trigger: TCTGCAGAAGAGAGACTCCAAATCAGGAAGAATGCT...TACTTTAGAAAGAGGCCAAAGACCCCTGAGCTGGAACTGACCTGAAAGTGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS-3UTR CAA 90 bp | TATTCTGGGAGGTGGAGGCAGGAACACTCAGGGATTAAGACAAGGAAAGGAAAAAACTCATCATCTTTGTaGCGACACCCTCCAATAAGG | + |
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Preference number: 5 (lower is better) Translates to: YSGRWRQEHSGIKTRKGKNSSSL*RHPPIR Trigger: CCTTATTGGAGGGTGTCGCAACAAAGATGATGAGTT...TTTTCCTTTCCTTGTCTTAATCCCTGAGTGTTCCTGCCTCCACCTCCCAGAATA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS-3UTR CAA 90 bp | AATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCTTGTTCGGGCCTCCTGAGTaGTGTGCAAGGATAACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: NVNRNLNLCCCGLKTECLFGPPE*CARITV Trigger: CACAGTTATCCTTGCACACAACTCAGGAGGCCCGAA...CAAGCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS CCA 90 bp | GTAAGTAACTTCTCCATGGAACACAGGAATGCTACTTCAAACTCCTaGTCGGAGAATCTGCTTATAGACGCTCTAGCATTCTTCCTGATT | + |
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Preference number: 5 (lower is better) Translates to: VSNFSMEHRNATSNS*SENLLIDALAFFLI Trigger: AATCAGGAAGAATGCTAGAGCGTCTATAAGCAGATTCTCCGACCAGGAGTTTGAAGTAGCATTCCTGTGTTCCATGGAGAAGTTACTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS CCA 90 bp | TCATCTTTGTTGCGACACCCTCCAATAAGGACAAGTTTAAGAGAATaGCCTAACTCAGCTGCTTTCTCATTTAACAATTTAGCAAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: SSLLRHPPIRTSLRE*PNSAAFSFNNLAKA Trigger: AGCCTTTGCTAAATTGTTAAATGAGAAAGCAGCTGAGTTAGGCCATTCTCTTAAACTTGTCCTTATTGGAGGGTGTCGCAACAAAGATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS-3UTR CAA 90 bp | ATCAATGTAAACAGGAATTTGAACCTCTGCTGTTGTGGACTCAAAACTGAATGCTGTTCTTTTCCATTTTaGCTGGTCGACACAGACTTC | + |
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Preference number: 5 (lower is better) Translates to: INVNRNLNLCCCGLKTECCSFPF*LVDTDF Trigger: GAAGTCTGTGTCGACCAGCAAAAATGGAAAAGAACA...GCATTCAGTTTTGAGTCCACAACAGCAGAGGTTCAAATTCCTGTTTACATTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS TCA 72 bp | TTCATGAGGAATGACAATGTCCAGCTTCGGGCCTCCTaGGTTGTGTGCAAGGATAACTGTGCCAGCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: FMRNDNVQLRAS*VVCKDNCASCH Trigger: ATGGCAGCTGGCACAGTTATCCTTGCACACAACTCAGGAGGCCCGAAGCTGGACATTGTCATTCCTCATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS TCA 72 bp | CAGCCAGAAAGCCAGTTATCTGTCCTTCATGAGGAATaGCAATGTCCAGCTTCGGGCCTCCTGAGTTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: QPESQLSVLHEE*QCPASGLLSCV Trigger: CACACAACTCAGGAGGCCCGAAGCTGGACATTGTCATTCCTCATGAAGGACAGATAACTGGCTTTCTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS TCA 72 bp | TCACTCTCAGCCAGAAAGCCAGTTATCTGTCCTTCATaGGGAATGACAATGTCCAGCTTCGGGCCTCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SLSARKPVICPS*GMTMSSFGPPE Trigger: CTCAGGAGGCCCGAAGCTGGACATTGTCATTCCTCATGAAGGACAGATAACTGGCTTTCTGGCTGAGAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS GCA 72 bp | CAAAGCACACCACAGAACTCTCTCTCCTCCGCCACCTaGATTACAGTATGGATGGAAAAATGCAACCACCGT | + |
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Preference number: 6 (lower is better) Translates to: QSTPQNSLSSAT*ITVWMEKCNHR Trigger: ACGGTGGTTGCATTTTTCCATCCATACTGTAATGCAGGTGGCGGAGGAGAGAGAGTTCTGTGGTGTGCTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS TCA 72 bp | CGAGAAGAATGGATCCAAGACTTTGGCCTAGCAATGTaGAGTGAGGATACCGGGAATCTTCCACAAGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: REEWIQDFGLAM*SEDTGNLPQGS Trigger: GCTACCTTGTGGAAGATTCCCGGTATCCTCACTTCACATTGCTAGGCCAAAGTCTTGGATCCATTCTTCTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 ENSMUST00000131624.2 |
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| CDS TCA 72 bp | ATACTTAAAGAGAGGGAGTGTGAAGGCGTATCCCATTaGGTCGATGTAAACATCAGGAACGCGCTGCATCAG | + |
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Preference number: 6 (lower is better) Translates to: ILKERECEGVSH*VDVNIRNALHQ Trigger: CTGATGCAGCGCGTTCCTGATGTTTACATCGACTCAATGGGATACGCCTTCACACTCCCTCTCTTTAAGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 ENSMUST00000131624.2 |
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| CDS CCA 72 bp | CAGAACTCTCTCTCCTCCGCCACCTGCATTACAGTATaGATGGAAAAATGCAACCACCGTTTGTTCTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: QNSLSSATCITV*MEKCNHRLFFS Trigger: GGAAAAGAACAAACGGTGGTTGCATTTTTCCATCCATACTGTAATGCAGGTGGCGGAGGAGAGAGAGTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS CAA 90 bp | CTGGTCGGAGAATCTGCTTATAGACGCTCTAGCATTCTTCCTGATTaGGAGTCTCTCTTCTGCAGACAGAGAAAGAATGTGAGCCATAGA | + |
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Preference number: 6 (lower is better) Translates to: LVGESAYRRSSILPD*ESLFCRQRKNVSHR Trigger: TCTATGGCTCACATTCTTTCTCTGTCTGCAGAAGAGAGACTCCAAATCAGGAAGAATGCTAGAGCGTCTATAAGCAGATTCTCCGACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS CCA 72 bp | TTCTCCATGGAACACAGGAATGCTACTTCAAACTCCTaGTCGGAGAATCTGCTTATAGACGCTCTAGCATTC | + |
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Preference number: 6 (lower is better) Translates to: FSMEHRNATSNS*SENLLIDALAF Trigger: GAATGCTAGAGCGTCTATAAGCAGATTCTCCGACCAGGAGTTTGAAGTAGCATTCCTGTGTTCCATGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS GCA 72 bp | TTGCTGGTCGACACAGACTTCTTCTTTCTCTGTAGATaGCACCTGATAACCCAAAGGCCAATGACCAAATAT | + |
|
Preference number: 6 (lower is better) Translates to: LLVDTDFFFLCR*HLITQRPMTKY Trigger: ATATTTGGTCATTGGCCTTTGGGTTATCAGGTGGCATCTACAGAGAAAGAAGAAGTCTGTGTCGACCAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS CCA 72 bp | TTGCGACACCCTCCAATAAGGACAAGTTTAAGAGAATaGCCTAACTCAGCTGCTTTCTCATTTAACAATTTA | + |
|
Preference number: 6 (lower is better) Translates to: LRHPPIRTSLRE*PNSAAFSFNNL Trigger: TAAATTGTTAAATGAGAAAGCAGCTGAGTTAGGCCATTCTCTTAAACTTGTCCTTATTGGAGGGTGTCGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000110737.3 |
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| CDS TCA 72 bp | ATGTTAAACCTTCTGAAAGCACCATCTAGTATCTGTTaGCCACTGACATTAATGTCACCAGTATATACAACA | + |
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Preference number: 6 (lower is better) Translates to: MLNLLKAPSSIC*PLTLMSPVYTT Trigger: TGTTGTATATACTGGTGACATTAATGTCAGTGGTCAACAGATACTAGATGGTGCTTTCAGAAGGTTTAACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072572.13 ENSMUST00000131624.2 |
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