Pregenerated sensors for ALG10B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075470Ensembl transcript IDs: ENSMUST00000100309.3, ENSMUST00000231200.2
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCATTCTCAGGTTCTTTAGGGACATGGCGTACACCAGCAGAAACTaGAGCACTCTTCTGAGCTCCGAGAGCGGTCCCTTCGTGGGCGCA | + |
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Preference number: 1 (lower is better) Translates to: SILRFFRDMAYTSRN*STLLSSESGPFVGA Trigger: TGCGCCCACGAAGGGACCGCTCTCGGAGCTCAGAAGAGTGCTGCAGTTTCTGCTGGTGTACGCCATGTCCCTAAAGAACCTGAGAATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231200.2 |
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| 3UTR CCA 90 bp | CAGAGGATCCCTAAACCCAATGGCATTAACTGCACAAGAAGCCAGTaGAGACAGTCCTATGAGACACAGACAGACTGGAGGGACCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: QRIPKPNGINCTRSQ*RQSYETQTDWRDLS Trigger: GGACAGGTCCCTCCAGTCTGTCTGTGTCTCATAGGACTGTCTCCACTGGCTTCTTGTGCAGTTAATGCCATTGGGTTTAGGGATCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR GCA 90 bp | AGAGGCAAAAAGGAATCAGGAGTTCAGGGTCACTCTTGGCTACATTaGGAATGCCAGGCTAGCCTGGATCATGAGCCCCTTCGTGAACAA | + |
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Preference number: 1 (lower is better) Translates to: RGKKESGVQGHSWLH*ECQASLDHEPLREQ Trigger: TTGTTCACGAAGGGGCTCATGATCCAGGCTAGCCTGGCATTCGCAATGTAGCCAAGAGTGACCCTGAACTCCTGATTCCTTTTTGCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR GCA 90 bp | AAAAAGGAATCAGGAGTTCAGGGTCACTCTTGGCTACATTGCGAATaGCAGGCTAGCCTGGATCATGAGCCCCTTCGTGAACAACGAACA | + |
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Preference number: 1 (lower is better) Translates to: KKESGVQGHSWLHCE*QASLDHEPLREQRT Trigger: TGTTCGTTGTTCACGAAGGGGCTCATGATCCAGGCTAGCCTGGCATTCGCAATGTAGCCAAGAGTGACCCTGAACTCCTGATTCCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR GCA 90 bp | AACGCTACCCTGAATCAGAGGATCCCTAAACCCAATGGCATTAACTaGACAAGAAGCCAGTGGAGACAGTCCTATGAGACACAGACAGAC | + |
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Preference number: 1 (lower is better) Translates to: NATLNQRIPKPNGIN*TRSQWRQSYETQTD Trigger: GTCTGTCTGTGTCTCATAGGACTGTCTCCACTGGCTTCTTGTGCAGTTAATGCCATTGGGTTTAGGGATCCTCTGATTCAGGGTAGCGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR TCA 90 bp | TGTGAGCGTTGCCAACACTTGAGTTTAGGTGCCCTTATACAAATGTaGGGAGAAACCCTGAAGCCAGAAGGTTTGTGGCTGGTTTTGTGT | + |
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Preference number: 1 (lower is better) Translates to: CERCQHLSLGALIQM*GETLKPEGLWLVLC Trigger: ACACAAAACCAGCCACAAACCTTCTGGCTTCAGGGTTTCTCCTCACATTTGTATAAGGGCACCTAAACTCAAGTGTTGGCAACGCTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR TCA 90 bp | TCTCTCTCCTCAGTTTCTCCGTGTGTGGTAGTTATCACCGAGAACTaGGAAACAGTGAGACATGTAGATGGTACAGGTTGCTTTCAAACC | + |
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Preference number: 1 (lower is better) Translates to: SLSSVSPCVVVITEN*ETVRHVDGTGCFQT Trigger: GGTTTGAAAGCAACCTGTACCATCTACATGTCTCACTGTTTCTCAGTTCTCGGTGATAACTACCACACACGGAGAAACTGAGGAGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR GCA 90 bp | TTTGAGTGTGAGCACAACAGCAGCAGCTCACAGCTTTATGATGTGTaGGTGTATCAAACCACTACTGATAAAGAGGACACTGCAATCCTT | + |
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Preference number: 1 (lower is better) Translates to: FECEHNSSSSQLYDV*VYQTTTDKEDTAIL Trigger: AAGGATTGCAGTGTCCTCTTTATCAGTAGTGGTTTGATACACGCACACATCATAAAGCTGTGAGCTGCTGCTGTTGTGCTCACACTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR TCA 90 bp | AGCTGCAGTAAATCCACATTTAAATTGGCAGGTTGCGAAACCCCCTaGAAAGACACTATGTTCTATCTACTCTCTCTCAAGTCACTGAAG | + |
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Preference number: 1 (lower is better) Translates to: SCSKSTFKLAGCETP*KDTMFYLLSLKSLK Trigger: CTTCAGTGACTTGAGAGAGAGTAGATAGAACATAGTGTCTTTTCAGGGGGTTTCGCAACCTGCCAATTTAAATGTGGATTTACTGCAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR CCA 90 bp | GATAAGGTACTAAGTGTAAATATAAACCACTACTTCCACATCATTTaGGGAGATGCAGCCATAAGGGGAAAGCACAGATCCACAGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: DKVLSVNINHYFHII*GDAAIRGKHRSTES Trigger: GCTTTCTGTGGATCTGTGCTTTCCCCTTATGGCTGCATCTCCCCAAATGATGTGGAAGTAGTGGTTTATATTTACACTTAGTACCTTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR GCA 90 bp | ACTAAGTGTAAATATAAACCACTACTTCCACATCATTTGGGGAGATaGAGCCATAAGGGGAAAGCACAGATCCACAGAAAGCACAAATGT | + |
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Preference number: 1 (lower is better) Translates to: TKCKYKPLLPHHLGR*SHKGKAQIHRKHKC Trigger: ACATTTGTGCTTTCTGTGGATCTGTGCTTTCCCCTTATGGCTGCATCTCCCCAAATGATGTGGAAGTAGTGGTTTATATTTACACTTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR CCA 90 bp | TGCACTATTTGTTACATATGTGCATCTATTCTAAGATCGGAGCTGTaGGTACGACAATATCTGGCAATTTCACTCAGAAATACTGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: CTICYICASILRSEL*VRQYLAISLRNTAG Trigger: CCCAGCAGTATTTCTGAGTGAAATTGCCAGATATTGTCGTACCCACAGCTCCGATCTTAGAATAGATGCACATATGTAACAAATAGTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR GCA 90 bp | AAAGTAAGGCAAGTCACCAAAACCTACTATAATACTGAATGGTCTTaGATCTTAAGTGGTGTTACTAAAATCATATCCTACTGCAGACAG | + |
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Preference number: 1 (lower is better) Translates to: KVRQVTKTYYNTEWS*ILSGVTKIISYCRQ Trigger: CTGTCTGCAGTAGGATATGATTTTAGTAACACCACTTAAGATGCAAGACCATTCAGTATTATAGTAGGTTTTGGTGACTTGCCTTACTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR GCA 90 bp | GCGTGCTGCAGCAGTCCAGAGGGAGAGGCAAAAAGGAATCAGGAGTTCAGGGTCGGCCCCTCTAAGCAGTaGTGGAGTGGGGCAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: ACCSSPEGEAKRNQEFRVGPSKQ*WSGANR Trigger: CCTGTTTGCCCCACTCCAGCACTGCTTAGAGGGGCC...GACCCTGAACTCCTGATTCCTTTTTGCCTCTCCCTCTGGACTGCTGCAGCACGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR GCA 90 bp | GCGTGCTGCAGCAGTCCAGAGGGAGAGGCAAAAAGGAATCAGGAGTTCAGGGTCACAAAGGAGGCGTGCTaGAGCAGTCCAGAGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: ACCSSPEGEAKRNQEFRVTKEAC*SSPEGE Trigger: CTCTCCCTCTGGACTGCTGCAGCACGCCTCCTTTGT...GACCCTGAACTCCTGATTCCTTTTTGCCTCTCCCTCTGGACTGCTGCAGCACGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR CCA 90 bp | GCGTGCTGCAGCAGTCCAGAGGGAGAGGCAAAAAGGAATCAGGAGTTCAGGGTCCCCTCTAAGCAGTGCTaGAGTGGGGCAAACAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: ACCSSPEGEAKRNQEFRVPSKQC*SGANRD Trigger: GTCCCTGTTTGCCCCACTCCAGCACTGCTTAGAGGG...GACCCTGAACTCCTGATTCCTTTTTGCCTCTCCCTCTGGACTGCTGCAGCACGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACAGACTGGAGGGACCTGTCCAAAAGCAAGGCCCCTCTAAGCAGTGCTGGAGGTCCCTGCAAGGGGTaGCCCAAGCCTTTAACCACT | + |
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Preference number: 2 (lower is better) Translates to: QTDWRDLSKSKAPLSSAGGPCKG*PKPLTT Trigger: AGTGGTTAAAGGCTTGGGCCACCCCTTGCAGGGACC...TCCAGCACTGCTTAGAGGGGCCTTGCTTTTGGACAGGTCCCTCCAGTCTGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR GCA 90 bp | GCGTGCTGCAGCAGTCCAGAGGGAGAGGCAAAAAGGAATCAGGAGTTCAGGGTCAGGTTCTTGTCAGGATaGCTAGTCATAAACCCGAGC | + |
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Preference number: 2 (lower is better) Translates to: ACCSSPEGEAKRNQEFRVRFLSG*LVINPS Trigger: GCTCGGGTTTATGACTAGGCATCCTGACAAGAACCT...GACCCTGAACTCCTGATTCCTTTTTGCCTCTCCCTCTGGACTGCTGCAGCACGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR CCA 90 bp | GCGTGCTGCAGCAGTCCAGAGGGAGAGGCAAAAAGGAATCAGGAGTTCAGGGTCTGCACAAGAAGCCAGTaGAGACAGTCCTATGAGACA | + |
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Preference number: 2 (lower is better) Translates to: ACCSSPEGEAKRNQEFRVCTRSQ*RQSYET Trigger: TGTCTCATAGGACTGTCTCCACTGGCTTCTTGTGCA...GACCCTGAACTCCTGATTCCTTTTTGCCTCTCCCTCTGGACTGCTGCAGCACGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR TCA 90 bp | GCGTGCTGCAGCAGTCCAGAGGGAGAGGCAAAAAGGAATCAGGAGTTCAGGGTCCTAGGTCACGTCATCTaGGACACAATCGTGAACAAA | + |
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Preference number: 2 (lower is better) Translates to: ACCSSPEGEAKRNQEFRVLGHVI*DTIVNK Trigger: TTTGTTCACGATTGTGTCTCAGATGACGTGACCTAG...GACCCTGAACTCCTGATTCCTTTTTGCCTCTCCCTCTGGACTGCTGCAGCACGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTCTAATATTAGACAAACGCACACTCTCTCTCCTCAGTTTCTCCGTGTGTGGGGCCCCTCTAAGCAGTaGTGGAGTGGGGCAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: VSNIRQTHTLSPQFLRVWGPSKQ*WSGANR Trigger: CCTGTTTGCCCCACTCCAGCACTGCTTAGAGGGGCC...CCACACACGGAGAAACTGAGGAGAGAGAGTGTGCGTTTGTCTAATATTAGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCGTGTGTGGTAGTTATCACCGAGAACTGAGAAACAGTGAGACATGTAGAGTGAGCACGGGAGACTaGAGAGCCAGAGGCGGCACT | + |
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Preference number: 2 (lower is better) Translates to: FSVCGSYHRELRNSETCRVSTGD*RARGGT Trigger: AGTGCCGCCTCTGGCTCTGCAGTCTCCCGTGCTCAC...TCTACATGTCTCACTGTTTCTCAGTTCTCGGTGATAACTACCACACACGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR GCA 90 bp | AATTGGCAGGTTGCGAAACCCCCTGAAAAGACACTATGTTCTATCTACTCTCTCGTGAGCACGGGAGACTaGAGAGCCAGAGGCGGCACT | + |
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Preference number: 2 (lower is better) Translates to: NWQVAKPPEKTLCSIYSLVSTGD*RARGGT Trigger: AGTGCCGCCTCTGGCTCTGCAGTCTCCCGTGCTCAC...GAGAGAGTAGATAGAACATAGTGTCTTTTCAGGGGGTTTCGCAACCTGCCAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR GCA 90 bp | CAGACAGACTGGAGGGACCTGTCCAAAAGCAAGGCCCCTCTAAGCAGTGCTGGAGCCCAAAGCCTCCAATaGACTATTTGTTACATATGT | + |
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Preference number: 2 (lower is better) Translates to: QTDWRDLSKSKAPLSSAGAQSLQ*TICYIC Trigger: ACATATGTAACAAATAGTGCATTGGAGGCTTTGGGC...TCCAGCACTGCTTAGAGGGGCCTTGCTTTTGGACAGGTCCCTCCAGTCTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCGTGTGTGGTAGTTATCACCGAGAACTGAGAAACAGTGAGACATGTAGAACAAAGGAGGCGTGCTaGAGCAGTCCAGAGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: FSVCGSYHRELRNSETCRTKEAC*SSPEGE Trigger: CTCTCCCTCTGGACTGCTGCAGCACGCCTCCTTTGT...TCTACATGTCTCACTGTTTCTCAGTTCTCGGTGATAACTACCACACACGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAGCTGTGAATCCCTTCTGTCGTCTCTAGACAAAGGTGATGATCATAACGCCTGTGAGGAGAAACCCTaGAGCCAGAAGGTTTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: ESCESLLSSLDKGDDHNACEEKP*SQKVCG Trigger: GCCACAAACCTTCTGGCTTCAGGGTTTCTCCTCACA...GGCGTTATGATCATCACCTTTGTCTAGAGACGACAGAAGGGATTCACAGCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTCTAATATTAGACAAACGCACACTCTCTCTCCTCAGTTTCTCCGTGTGTGGGTGGAGACAGTCCTATaGGACACAGACAGACTGGAG | + |
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Preference number: 2 (lower is better) Translates to: VSNIRQTHTLSPQFLRVWVETVL*DTDRLE Trigger: CTCCAGTCTGTCTGTGTCTCATAGGACTGTCTCCAC...CCACACACGGAGAAACTGAGGAGAGAGAGTGTGCGTTTGTCTAATATTAGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR TCA 90 bp | CAGACAGACTGGAGGGACCTGTCCAAAAGCAAGGCCCCTCTAAGCAGTGCTGGAGAGTTCTTCTGGTTTTaGATAATAGGGACAACTGTA | + |
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Preference number: 2 (lower is better) Translates to: QTDWRDLSKSKAPLSSAGEFFWF*IIGTTV Trigger: TACAGTTGTCCCTATTATTCAAAACCAGAAGAACTC...TCCAGCACTGCTTAGAGGGGCCTTGCTTTTGGACAGGTCCCTCCAGTCTGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCGTGTGTGGTAGTTATCACCGAGAACTGAGAAACAGTGAGACATGTAGAAGTAAGTTCAAGCCCTaGACAGCTTACCCAGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: FSVCGSYHRELRNSETCRSKFKP*TAYPAP Trigger: GGGGGCTGGGTAAGCTGTGCAGGGCTTGAACTTACT...TCTACATGTCTCACTGTTTCTCAGTTCTCGGTGATAACTACCACACACGGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTCTAATATTAGACAAACGCACACTCTCTCTCCTCAGTTTCTCCGTGTGTGGCACTCTTGGCTACATTaGGAATGCCAGGCTAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: VSNIRQTHTLSPQFLRVWHSWLH*ECQASL Trigger: CAGGCTAGCCTGGCATTCGCAATGTAGCCAAGAGTG...CCACACACGGAGAAACTGAGGAGAGAGAGTGTGCGTTTGTCTAATATTAGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGGAGAGGCAAAAAGGAATCAGGAGTTCAGGGTCACTCTTGGCTACATTGAGGTTCTTGTCAGGATaGCTAGTCATAAACCCGAGC | + |
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Preference number: 2 (lower is better) Translates to: QRERQKGIRSSGSLLATLRFLSG*LVINPS Trigger: GCTCGGGTTTATGACTAGGCATCCTGACAAGAACCT...CAATGTAGCCAAGAGTGACCCTGAACTCCTGATTCCTTTTTGCCTCTCCCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTCTAATATTAGACAAACGCACACTCTCTCTCCTCAGTTTCTCCGTGTGTGGACACAAAGTCAGATCTaGGAGAGGAGGCTAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: VSNIRQTHTLSPQFLRVWTQSQI*ERRLGL Trigger: CAGGCCTAGCCTCCTCTCCCAGATCTGACTTTGTGT...CCACACACGGAGAAACTGAGGAGAGAGAGTGTGCGTTTGTCTAATATTAGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR TCA 90 bp | AATTGGCAGGTTGCGAAACCCCCTGAAAAGACACTATGTTCTATCTACTCTCTCGTGGAGACAGTCCTATaGGACACAGACAGACTGGAG | + |
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Preference number: 2 (lower is better) Translates to: NWQVAKPPEKTLCSIYSLVETVL*DTDRLE Trigger: CTCCAGTCTGTCTGTGTCTCATAGGACTGTCTCCAC...GAGAGAGTAGATAGAACATAGTGTCTTTTCAGGGGGTTTCGCAACCTGCCAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGGAGAGGCAAAAAGGAATCAGGAGTTCAGGGTCACTCTTGGCTACATTGATGTGGAGTACAGCATaGATCCCTGTTGAAACACAG | + |
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Preference number: 2 (lower is better) Translates to: QRERQKGIRSSGSLLATLMWSTA*IPVETQ Trigger: CTGTGTTTCAACAGGGATTCATGCTGTACTCCACAT...CAATGTAGCCAAGAGTGACCCTGAACTCCTGATTCCTTTTTGCCTCTCCCTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR GCA 90 bp | AATTGGCAGGTTGCGAAACCCCCTGAAAAGACACTATGTTCTATCTACTCTCTCAGCTGGCAGAGTGCTTaGCTAGCAGCTTTAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: NWQVAKPPEKTLCSIYSLSWQSA*LAALGP Trigger: AGGACCTAAAGCTGCTAGGCAAGCACTCTGCCAGCT...GAGAGAGTAGATAGAACATAGTGTCTTTTCAGGGGGTTTCGCAACCTGCCAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR CCA 90 bp | AATTGGCAGGTTGCGAAACCCCCTGAAAAGACACTATGTTCTATCTACTCTCTCAGGTGGATGTGTAAGTaGTTGTGCTGCCCTAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: NWQVAKPPEKTLCSIYSLRWMCK*LCCPRS Trigger: GCTCCTAGGGCAGCACAACCACTTACACATCCACCT...GAGAGAGTAGATAGAACATAGTGTCTTTTCAGGGGGTTTCGCAACCTGCCAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCGTGTGTGGTAGTTATCACCGAGAACTGAGAAACAGTGAGACATGTAGACTACTGGAAGCGTGGTaGAGAATGCAGAGCCCACAA | + |
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Preference number: 2 (lower is better) Translates to: FSVCGSYHRELRNSETCRLLEAW*RMQSPQ Trigger: TTGTGGGCTCTGCATTCTCCACCACGCTTCCAGTAG...TCTACATGTCTCACTGTTTCTCAGTTCTCGGTGATAACTACCACACACGGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGGAGAGGCAAAAAGGAATCAGGAGTTCAGGGTCACTCTTGGCTACATTGGTTATCACCGAGAACTaGGAAACAGTGAGACATGTA | + |
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Preference number: 2 (lower is better) Translates to: QRERQKGIRSSGSLLATLVITEN*ETVRHV Trigger: TACATGTCTCACTGTTTCTCAGTTCTCGGTGATAAC...CAATGTAGCCAAGAGTGACCCTGAACTCCTGATTCCTTTTTGCCTCTCCCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAGCTGTGAATCCCTTCTGTCGTCTCTAGACAAAGGTGATGATCATAACGCCCCCAATGGCATTAACTaGACAAGAAGCCAGTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: ESCESLLSSLDKGDDHNAPNGIN*TRSQWR Trigger: TCTCCACTGGCTTCTTGTGCAGTTAATGCCATTGGG...GGCGTTATGATCATCACCTTTGTCTAGAGACGACAGAAGGGATTCACAGCTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR GCA 90 bp | AATTGGCAGGTTGCGAAACCCCCTGAAAAGACACTATGTTCTATCTACTCTCTCTACACCAGCAGAAACTaGAGCACTCTTCTGAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: NWQVAKPPEKTLCSIYSLYTSRN*STLLSS Trigger: GGAGCTCAGAAGAGTGCTGCAGTTTCTGCTGGTGTA...GAGAGAGTAGATAGAACATAGTGTCTTTTCAGGGGGTTTCGCAACCTGCCAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231200.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGAAATACTGCTGGGTCATTTATTTGTAAGTGGTTTTCAACTTACTTGCTGTGGAGACAGGCCTCGTaGCTACTCCGGTCACCAACA | + |
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Preference number: 2 (lower is better) Translates to: LRNTAGSFICKWFSTYLLWRQAS*LLRSPT Trigger: TGTTGGTGACCGGAGTAGTCACGAGGCCTGTCTCCA...CAGCAAGTAAGTTGAAAACCACTTACAAATAAATGACCCAGCAGTATTTCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231200.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCGTGTGTGGTAGTTATCACCGAGAACTGAGAAACAGTGAGACATGTAGACCCAATGGCATTAACTaGACAAGAAGCCAGTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: FSVCGSYHRELRNSETCRPNGIN*TRSQWR Trigger: TCTCCACTGGCTTCTTGTGCAGTTAATGCCATTGGG...TCTACATGTCTCACTGTTTCTCAGTTCTCGGTGATAACTACCACACACGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCGTGTGTGGTAGTTATCACCGAGAACTGAGAAACAGTGAGACATGTAGACATCATTTGGGGAGATaGAGCCATAAGGGGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: FSVCGSYHRELRNSETCRHHLGR*SHKGKA Trigger: TGCTTTCCCCTTATGGCTGCATCTCCCCAAATGATG...TCTACATGTCTCACTGTTTCTCAGTTCTCGGTGATAACTACCACACACGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGGAGAGGCAAAAAGGAATCAGGAGTTCAGGGTCACTCTTGGCTACATTGCTAAATGTGCATGTCTaGACTCAGCACTACAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: QRERQKGIRSSGSLLATLLNVHV*TQHYRK Trigger: TTTTCTGTAGTGCTGAGTGCAGACATGCACATTTAG...CAATGTAGCCAAGAGTGACCCTGAACTCCTGATTCCTTTTTGCCTCTCCCTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCCGTGTGTGGTAGTTATCACCGAGAACTGAGAAACAGTGAGACATGTAGATCCTCCTTCTTCTTCTaGAGCTCAATCTTCCAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: FSVCGSYHRELRNSETCRSSFFF*SSIFQA Trigger: AGCCTGGAAGATTGAGCTGCAGAAGAAGAAGGAGGA...TCTACATGTCTCACTGTTTCTCAGTTCTCGGTGATAACTACCACACACGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231200.2 |
||
| 3UTR-3UTR CCA 90 bp | AGATATGTTCAGTCTCTAGGAATTATAAATGAAAGCTGTGAATCCCTTCTGTCGCCCTCTAAGCAGTGCTaGAGTGGGGCAAACAGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: RYVQSLGIINESCESLLSPSKQC*SGANRD Trigger: GTCCCTGTTTGCCCCACTCCAGCACTGCTTAGAGGG...CGACAGAAGGGATTCACAGCTTTCATTTATAATTCCTAGAGACTGAACATATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGCTGTGAATCCCTTCTGTCGTCTCTAGACAAAGGTGATGATCATAACGCCTACTTCCACATCATTTaGGGAGATGCAGCCATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: ESCESLLSSLDKGDDHNAYFHII*GDAAIR Trigger: CCTTATGGCTGCATCTCCCCAAATGATGTGGAAGTA...GGCGTTATGATCATCACCTTTGTCTAGAGACGACAGAAGGGATTCACAGCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR TCA 90 bp | AATTGGCAGGTTGCGAAACCCCCTGAAAAGACACTATGTTCTATCTACTCTCTCCACTCCACACCAAAATaGTGTGAGACCTATGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: NWQVAKPPEKTLCSIYSLHSTPK*CETYEW Trigger: CCATTCATAGGTCTCACATCATTTTGGTGTGGAGTG...GAGAGAGTAGATAGAACATAGTGTCTTTTCAGGGGGTTTCGCAACCTGCCAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCTCTAATATTAGACAAACGCACACTCTCTCTCCTCAGTTTCTCCGTGTGTGGACAGTAGCACAGAACTaGAAGCGAAACAAAGCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: VSNIRQTHTLSPQFLRVWTVAQN*KRNKAN Trigger: GTTTGCTTTGTTTCGCTTTCAGTTCTGTGCTACTGT...CCACACACGGAGAAACTGAGGAGAGAGAGTGTGCGTTTGTCTAATATTAGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR GCA 90 bp | AGATATGTTCAGTCTCTAGGAATTATAAATGAAAGCTGTGAATCCCTTCTGTCGAGTAAGTTCAAGCCCTaGACAGCTTACCCAGCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: RYVQSLGIINESCESLLSSKFKP*TAYPAP Trigger: GGGGGCTGGGTAAGCTGTGCAGGGCTTGAACTTACT...CGACAGAAGGGATTCACAGCTTTCATTTATAATTCCTAGAGACTGAACATATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTTCAAGCCCTGCACAGCTTACCCAGCCCCCTAAATCTATACACACACAGAAAGCCCAAAGCCTCCAATaGACTATTTGTTACATATGT | + |
|
Preference number: 2 (lower is better) Translates to: SSSPAQLTQPPKSIHTQKAQSLQ*TICYIC Trigger: ACATATGTAACAAATAGTGCATTGGAGGCTTTGGGC...TTTCTGTGTGTGTATAGATTTAGGGGGCTGGGTAAGCTGTGCAGGGCTTGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR GCA 90 bp | AATTGGCAGGTTGCGAAACCCCCTGAAAAGACACTATGTTCTATCTACTCTCTCTGTAAGCAAACGCACTaGACTGCACACAAAGTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: NWQVAKPPEKTLCSIYSLCKQTH*TAHKVR Trigger: TCTGACTTTGTGTGCAGTGCAGTGCGTTTGCTTACA...GAGAGAGTAGATAGAACATAGTGTCTTTTCAGGGGGTTTCGCAACCTGCCAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCTCTAATATTAGACAAACGCACACTCTCTCTCCTCAGTTTCTCCGTGTGTGGCACATAGCATGTTTATaGGCTTCATGGATGTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: VSNIRQTHTLSPQFLRVWHIACL*ASWMWS Trigger: ACTCCACATCCATGAAGCCCATAAACATGCTATGTG...CCACACACGGAGAAACTGAGGAGAGAGAGTGTGCGTTTGTCTAATATTAGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR TCA 90 bp | AGATATGTTCAGTCTCTAGGAATTATAAATGAAAGCTGTGAATCCCTTCTGTCGTGTGAGGAGAAACCCTaGAGCCAGAAGGTTTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: RYVQSLGIINESCESLLSCEEKP*SQKVCG Trigger: GCCACAAACCTTCTGGCTTCAGGGTTTCTCCTCACA...CGACAGAAGGGATTCACAGCTTTCATTTATAATTCCTAGAGACTGAACATATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCTCTAATATTAGACAAACGCACACTCTCTCTCCTCAGTTTCTCCGTGTGTGGAATTCTAGTAGTTTCTaGGGAACTGTAGAAGCAACC | + |
|
Preference number: 2 (lower is better) Translates to: VSNIRQTHTLSPQFLRVWNSSSF*GTVEAT Trigger: GGTTGCTTCTACAGTTCCTCAGAAACTACTAGAATT...CCACACACGGAGAAACTGAGGAGAGAGAGTGTGCGTTTGTCTAATATTAGAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231200.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCTCTAATATTAGACAAACGCACACTCTCTCTCCTCAGTTTCTCCGTGTGTGGACACTTGAGTTTAGGTaGCCTTATACAAATGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: VSNIRQTHTLSPQFLRVWTLEFR*PYTNVR Trigger: CCTCACATTTGTATAAGGGCACCTAAACTCAAGTGT...CCACACACGGAGAAACTGAGGAGAGAGAGTGTGCGTTTGTCTAATATTAGAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCTCTAATATTAGACAAACGCACACTCTCTCTCCTCAGTTTCTCCGTGTGTGGAGTGAGACATGTAGATaGTACAGGTTGCTTTCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: VSNIRQTHTLSPQFLRVWSETCR*YRLLSN Trigger: GTTTGAAAGCAACCTGTACCATCTACATGTCTCACT...CCACACACGGAGAAACTGAGGAGAGAGAGTGTGCGTTTGTCTAATATTAGAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGCTGTGAATCCCTTCTGTCGTCTCTAGACAAAGGTGATGATCATAACGCCATGAAACTAAACCAATaGCTTCTCTCACCTTTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: ESCESLLSSLDKGDDHNAMKLNQ*LLSPFE Trigger: CTCAAAAGGTGAGAGAAGTCATTGGTTTAGTTTCAT...GGCGTTATGATCATCACCTTTGTCTAGAGACGACAGAAGGGATTCACAGCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR GCA 90 bp | AGATATGTTCAGTCTCTAGGAATTATAAATGAAAGCTGTGAATCCCTTCTGTCGGCAAACGCACTGCACTaGACACAAAGTCAGATCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RYVQSLGIINESCESLLSANALH*TQSQIW Trigger: CCAGATCTGACTTTGTGTGCAGTGCAGTGCGTTTGC...CGACAGAAGGGATTCACAGCTTTCATTTATAATTCCTAGAGACTGAACATATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR CCA 90 bp | AACTATTTGCTGACCTCTGATCTACATTTAAAGCAATGGATAACGAACAATGCTCTACTGGAAGCGTGGTaGAGAATGCAGAGCCCACAA | + |
|
Preference number: 2 (lower is better) Translates to: NYLLTSDLHLKQWITNNALLEAW*RMQSPQ Trigger: TTGTGGGCTCTGCATTCTCCACCACGCTTCCAGTAG...AGCATTGTTCGTTATCCATTGCTTTAAATGTAGATCAGAGGTCAGCAAATAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR CAA 90 bp | AAATTAAAACACCTGTCTCTTAGCCCAAAGCCTCCAATGCACTATTaGTTACATATGTGCATCTATTCTAAGATCGGAGCTGTGGGTACG | + |
|
Preference number: 2 (lower is better) Translates to: KLKHLSLSPKPPMHY*LHMCIYSKIGAVGT Trigger: CGTACCCACAGCTCCGATCTTAGAATAGATGCACATATGTAACAAATAGTGCATTGGAGGCTTTGGGCTAAGAGACAGGTGTTTTAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR CAA 90 bp | TATCACCGAGAACTGAGAAACAGTGAGACATGTAGATGGTACAGGTaGCTTTCAAACCTTTTACCACTATCAGAAACAAACCCCAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: YHRELRNSETCRWYR*LSNLLPLSETNPKS Trigger: GGATTTGGGGTTTGTTTCTGATAGTGGTAAAAGGTTTGAAAGCAACCTGTACCATCTACATGTCTCACTGTTTCTCAGTTCTCGGTGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR TCA 90 bp | AATTGGCAGGTTGCGAAACCCCCTGAAAAGACACTATGTTCTATCTACTCTCTCATGAAACTAAACCAATaGCTTCTCTCACCTTTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: NWQVAKPPEKTLCSIYSLMKLNQ*LLSPFE Trigger: CTCAAAAGGTGAGAGAAGTCATTGGTTTAGTTTCAT...GAGAGAGTAGATAGAACATAGTGTCTTTTCAGGGGGTTTCGCAACCTGCCAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCAGAAATACTGCTGGGTCATTTATTTGTAAGTGGTTTTCAACTTACTTGCTGTGCACAAGAAGCCAGTaGAGACAGTCCTATGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: LRNTAGSFICKWFSTYLLCTRSQ*RQSYET Trigger: TGTCTCATAGGACTGTCTCCACTGGCTTCTTGTGCA...CAGCAAGTAAGTTGAAAACCACTTACAAATAAATGACCCAGCAGTATTTCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR CCA 90 bp | AGATATGTTCAGTCTCTAGGAATTATAAATGAAAGCTGTGAATCCCTTCTGTCGTACTTCCACATCATTTaGGGAGATGCAGCCATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: RYVQSLGIINESCESLLSYFHII*GDAAIR Trigger: CCTTATGGCTGCATCTCCCCAAATGATGTGGAAGTA...CGACAGAAGGGATTCACAGCTTTCATTTATAATTCCTAGAGACTGAACATATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR CCA 90 bp | AATTGGCAGGTTGCGAAACCCCCTGAAAAGACACTATGTTCTATCTACTCTCTCCACTTCCAAACATTATaGAATTTAGTGCTGGAATCA | + |
|
Preference number: 2 (lower is better) Translates to: NWQVAKPPEKTLCSIYSLHFQTL*NLVLES Trigger: TGATTCCAGCACTAAATTCCATAATGTTTGGAAGTG...GAGAGAGTAGATAGAACATAGTGTCTTTTCAGGGGGTTTCGCAACCTGCCAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR TCA 90 bp | AACTATTTGCTGACCTCTGATCTACATTTAAAGCAATGGATAACGAACAATGCTATGTGGAGTACAGCATaGATCCCTGTTGAAACACAG | + |
|
Preference number: 2 (lower is better) Translates to: NYLLTSDLHLKQWITNNAMWSTA*IPVETQ Trigger: CTGTGTTTCAACAGGGATTCATGCTGTACTCCACAT...AGCATTGTTCGTTATCCATTGCTTTAAATGTAGATCAGAGGTCAGCAAATAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR CAA 90 bp | GTTTGTGGCTGGTTTTGTGTAGGAGCCTGGATAACTAACAGGGCATaGTTTCAGAAGATAATCCATAAAAAGTATTATAATCAACACAGT | + |
|
Preference number: 2 (lower is better) Translates to: VCGWFCVGAWITNRA*FQKIIHKKYYNQHS Trigger: ACTGTGTTGATTATAATACTTTTTATGGATTATCTTCTGAAACAATGCCCTGTTAGTTATCCAGGCTCCTACACAAAACCAGCCACAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR GCA 90 bp | AGATATGTTCAGTCTCTAGGAATTATAAATGAAAGCTGTGAATCCCTTCTGTCGCTATCATCACTTCTATaGCCTAAATTAAAACACCTG | + |
|
Preference number: 2 (lower is better) Translates to: RYVQSLGIINESCESLLSLSSLL*PKLKHL Trigger: CAGGTGTTTTAATTTAGGGCATAGAAGTGATGATAG...CGACAGAAGGGATTCACAGCTTTCATTTATAATTCCTAGAGACTGAACATATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
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| 3UTR-3UTR GCA 90 bp | AGATATGTTCAGTCTCTAGGAATTATAAATGAAAGCTGTGAATCCCTTCTGTCGAATACTGAATGGTCTTaGATCTTAAGTGGTGTTACT | + |
|
Preference number: 2 (lower is better) Translates to: RYVQSLGIINESCESLLSNTEWS*ILSGVT Trigger: AGTAACACCACTTAAGATGCAAGACCATTCAGTATT...CGACAGAAGGGATTCACAGCTTTCATTTATAATTCCTAGAGACTGAACATATCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR GCA 72 bp | ATGGGTGGAGGTTTTATGCAGGTGAGCACGGGAGACTaGAGAGCCAGAGGCGGCACTCTGTGCCCTAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: MGGGFMQVSTGD*RARGGTLCPRG Trigger: ACCTCTAGGGCACAGAGTGCCGCCTCTGGCTCTGCAGTCTCCCGTGCTCACCTGCATAAAACCTCCACCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR GCA 72 bp | AGGTTCTTTAGGGACATGGCGTACACCAGCAGAAACTaGAGCACTCTTCTGAGCTCCGAGAGCGGTCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RFFRDMAYTSRN*STLLSSESGPF Trigger: GAAGGGACCGCTCTCGGAGCTCAGAAGAGTGCTGCAGTTTCTGCTGGTGTACGCCATGTCCCTAAAGAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231200.2 |
||
| 3UTR CCA 72 bp | AGCCAGTGGAGACAGTCCTATGAGACACAGACAGACTaGAGGGACCTGTCCAAAAGCAAGGCCCCTCTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SQWRQSYETQTD*RDLSKSKAPLS Trigger: GCTTAGAGGGGCCTTGCTTTTGGACAGGTCCCTCCAGTCTGTCTGTGTCTCATAGGACTGTCTCCACTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR GCA 72 bp | TCAGGAGTTCAGGGTCACTCTTGGCTACATTGCGAATaGCAGGCTAGCCTGGATCATGAGCCCCTTCGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SGVQGHSWLHCE*QASLDHEPLRE Trigger: TTCACGAAGGGGCTCATGATCCAGGCTAGCCTGGCATTCGCAATGTAGCCAAGAGTGACCCTGAACTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR GCA 72 bp | CTAAGTGTGATCCCTAGCCACACAAAGGAGGCGTGCTaGAGCAGTCCAGAGGGAGAGGCAAAAAGGAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: LSVIPSHTKEAC*SSPEGEAKRNQ Trigger: CTGATTCCTTTTTGCCTCTCCCTCTGGACTGCTGCAGCACGCCTCCTTTGTGTGGCTAGGGATCACACTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR GCA 72 bp | GTCCTAAGTGTGATCCCTAGCCACACAAAGGAGGCGTaGTGCAGCAGTCCAGAGGGAGAGGCAAAAAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VLSVIPSHTKEA*CSSPEGEAKRN Trigger: ATTCCTTTTTGCCTCTCCCTCTGGACTGCTGCAGCACGCCTCCTTTGTGTGGCTAGGGATCACACTTAGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR CAA 90 bp | GCGTGCTGCAGCAGTCCAGAGGGAGAGGCAAAAAGGAATCAGGAGTTCAGGGTCCTACTTCCACATCATTaGGGGAGATGCAGCCATAAG | + |
|
Preference number: 3 (lower is better) Translates to: ACCSSPEGEAKRNQEFRVLLPHH*GRCSHK Trigger: CTTATGGCTGCATCTCCCCAAATGATGTGGAAGTAG...GACCCTGAACTCCTGATTCCTTTTTGCCTCTCCCTCTGGACTGCTGCAGCACGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR GCA 72 bp | AAGGAATCAGGAGTTCAGGGTCACTCTTGGCTACATTaGGAATGCCAGGCTAGCCTGGATCATGAGCCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: KESGVQGHSWLH*ECQASLDHEPL Trigger: AAGGGGCTCATGATCCAGGCTAGCCTGGCATTCGCAATGTAGCCAAGAGTGACCCTGAACTCCTGATTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR CAA 90 bp | GCGTGCTGCAGCAGTCCAGAGGGAGAGGCAAAAAGGAATCAGGAGTTCAGGGTCTCTGGAAGAGATAGTTaGTATGTGCCTCAACTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ACCSSPEGEAKRNQEFRVSGRDS*YVPQLS Trigger: AGACAGTTGAGGCACATACAAACTATCTCTTCCAGA...GACCCTGAACTCCTGATTCCTTTTTGCCTCTCCCTCTGGACTGCTGCAGCACGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR CAA 90 bp | GCGTGCTGCAGCAGTCCAGAGGGAGAGGCAAAAAGGAATCAGGAGTTCAGGGTCCTGCTTCCTTCTATATaGAAAACGCCATTCAATACC | + |
|
Preference number: 3 (lower is better) Translates to: ACCSSPEGEAKRNQEFRVLLPSI*KTPFNT Trigger: GGTATTGAATGGCGTTTTCAATATAGAAGGAAGCAG...GACCCTGAACTCCTGATTCCTTTTTGCCTCTCCCTCTGGACTGCTGCAGCACGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR CAA 90 bp | GCGTGCTGCAGCAGTCCAGAGGGAGAGGCAAAAAGGAATCAGGAGTTCAGGGTCTGCGATGTAGATTTTTaGTGTTCTCACAATCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ACCSSPEGEAKRNQEFRVCDVDF*CSHNLR Trigger: CCTCAGATTGTGAGAACACAAAAAATCTACATCGCA...GACCCTGAACTCCTGATTCCTTTTTGCCTCTCCCTCTGGACTGCTGCAGCACGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR CCA 72 bp | CCTAAACCCAATGGCATTAACTGCACAAGAAGCCAGTaGAGACAGTCCTATGAGACACAGACAGACTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PKPNGINCTRSQ*RQSYETQTDWR Trigger: CCTCCAGTCTGTCTGTGTCTCATAGGACTGTCTCCACTGGCTTCTTGTGCAGTTAATGCCATTGGGTTTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGGAGAGGCAAAAAGGAATCAGGAGTTCAGGGTCACTCTTGGCTACATTGCAGCATGAATCCCTGTaGAAACACAGTAGGAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: QRERQKGIRSSGSLLATLQHESL*KHSRSH Trigger: GTGACTCCTACTGTGTTTCAACAGGGATTCATGCTG...CAATGTAGCCAAGAGTGACCCTGAACTCCTGATTCCTTTTTGCCTCTCCCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR TCA 72 bp | GGCTTCATGGATGTGGAGTACAGCATGAATCCCTGTTaGAACACAGTAGGAGTCACACCAGGTACTAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: GFMDVEYSMNPC*NTVGVTPGTNW Trigger: CCAGTTAGTACCTGGTGTGACTCCTACTGTGTTTCAACAGGGATTCATGCTGTACTCCACATCCATGAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTGGCAGGTTGCGAAACCCCCTGAAAAGACACTATGTTCTATCTACTCTCTCCTGAAGCCAGAAGGTTaGTGGCTGGTTTTGTGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: NWQVAKPPEKTLCSIYSLLKPEG*WLVLCR Trigger: CCTACACAAAACCAGCCACAAACCTTCTGGCTTCAG...GAGAGAGTAGATAGAACATAGTGTCTTTTCAGGGGGTTTCGCAACCTGCCAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGGAGAGGCAAAAAGGAATCAGGAGTTCAGGGTCACTCTTGGCTACATTGATGGGAGATGAAAGATaGTCTGCTCTGGAAGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: QRERQKGIRSSGSLLATLMGDER*SALEEI Trigger: TATCTCTTCCAGAGCAGACAATCTTTCATCTCCCAT...CAATGTAGCCAAGAGTGACCCTGAACTCCTGATTCCTTTTTGCCTCTCCCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR TCA 72 bp | TGCCAACACTTGAGTTTAGGTGCCCTTATACAAATGTaGGGAGAAACCCTGAAGCCAGAAGGTTTGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: CQHLSLGALIQM*GETLKPEGLWL Trigger: CAGCCACAAACCTTCTGGCTTCAGGGTTTCTCCTCACATTTGTATAAGGGCACCTAAACTCAAGTGTTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR GCA 72 bp | CTGAATCAGAGGATCCCTAAACCCAATGGCATTAACTaGACAAGAAGCCAGTGGAGACAGTCCTATGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LNQRIPKPNGIN*TRSQWRQSYET Trigger: TGTCTCATAGGACTGTCTCCACTGGCTTCTTGTGCAGTTAATGCCATTGGGTTTAGGGATCCTCTGATTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR TCA 72 bp | TCAACTTACTTGCTGTTCTTTACAAAAGAGAGTTGGTaGGTAAGTTCAAGCCCTGCACAGCTTACCCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: STYLLFFTKESW*VSSSPAQLTQP Trigger: GGGCTGGGTAAGCTGTGCAGGGCTTGAACTTACTCACCAACTCTCTTTTGTAAAGAACAGCAAGTAAGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR GCA 72 bp | GAGCACAACAGCAGCAGCTCACAGCTTTATGATGTGTaGGTGTATCAAACCACTACTGATAAAGAGGACACT | + |
|
Preference number: 3 (lower is better) Translates to: EHNSSSSQLYDV*VYQTTTDKEDT Trigger: AGTGTCCTCTTTATCAGTAGTGGTTTGATACACGCACACATCATAAAGCTGTGAGCTGCTGCTGTTGTGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR GCA 72 bp | AGCCCAAAGCCTCCAATGCACTATTTGTTACATATGTaGATCTATTCTAAGATCGGAGCTGTGGGTACGACA | + |
|
Preference number: 3 (lower is better) Translates to: SPKPPMHYLLHM*IYSKIGAVGTT Trigger: TGTCGTACCCACAGCTCCGATCTTAGAATAGATGCACATATGTAACAAATAGTGCATTGGAGGCTTTGGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCCGTGTGTGGTAGTTATCACCGAGAACTGAGAAACAGTGAGACATGTAGAACAAATGACTTGTGGTaGCGTATTTCCCTTCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: FSVCGSYHRELRNSETCRTNDLW*RISLHF Trigger: GAAGTGAAGGGAAATACGCAACCACAAGTCATTTGT...TCTACATGTCTCACTGTTTCTCAGTTCTCGGTGATAACTACCACACACGGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR GCA 72 bp | AAATATAAACCACTACTTCCACATCATTTGGGGAGATaGAGCCATAAGGGGAAAGCACAGATCCACAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KYKPLLPHHLGR*SHKGKAQIHRK Trigger: CTTTCTGTGGATCTGTGCTTTCCCCTTATGGCTGCATCTCCCCAAATGATGTGGAAGTAGTGGTTTATATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR CCA 72 bp | CTAAGTGTAAATATAAACCACTACTTCCACATCATTTaGGGAGATGCAGCCATAAGGGGAAAGCACAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: LSVNINHYFHII*GDAAIRGKHRS Trigger: GGATCTGTGCTTTCCCCTTATGGCTGCATCTCCCCAAATGATGTGGAAGTAGTGGTTTATATTTACACTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR TCA 72 bp | TTCTCACAATCTGAGGCAGTGATGACACATGGGAGATaGAAGATTGTCTGCTCTGGAAGAGATAGTTTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: FSQSEAVMTHGR*KIVCSGRDSLY Trigger: ATACAAACTATCTCTTCCAGAGCAGACAATCTTTCATCTCCCATGTGTCATCACTGCCTCAGATTGTGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTGGCAGGTTGCGAAACCCCCTGAAAAGACACTATGTTCTATCTACTCTCTCCCTCCAATGCACTATTaGTTACATATGTGCATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: NWQVAKPPEKTLCSIYSLPPMHY*LHMCIY Trigger: ATAGATGCACATATGTAACAAATAGTGCATTGGAGG...GAGAGAGTAGATAGAACATAGTGTCTTTTCAGGGGGTTTCGCAACCTGCCAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR TCA 72 bp | AAATCCACATTTAAATTGGCAGGTTGCGAAACCCCCTaGAAAGACACTATGTTCTATCTACTCTCTCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KSTFKLAGCETP*KDTMFYLLSLK Trigger: CTTGAGAGAGAGTAGATAGAACATAGTGTCTTTTCAGGGGGTTTCGCAACCTGCCAATTTAAATGTGGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR CCA 72 bp | TATCACCGAGAACTGAGAAACAGTGAGACATGTAGATaGTACAGGTTGCTTTCAAACCTTTTACCACTATCA | + |
|
Preference number: 3 (lower is better) Translates to: YHRELRNSETCR*YRLLSNLLPLS Trigger: TGATAGTGGTAAAAGGTTTGAAAGCAACCTGTACCATCTACATGTCTCACTGTTTCTCAGTTCTCGGTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR CCA 72 bp | TGTTACATATGTGCATCTATTCTAAGATCGGAGCTGTaGGTACGACAATATCTGGCAATTTCACTCAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: CYICASILRSEL*VRQYLAISLRN Trigger: ATTTCTGAGTGAAATTGCCAGATATTGTCGTACCCACAGCTCCGATCTTAGAATAGATGCACATATGTAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGAAATACTGCTGGGTCATTTATTTGTAAGTGGTTTTCAACTTACTTGCTGGACTTCTCTCACCTTTaGAGTTCTTCTGGTTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LRNTAGSFICKWFSTYLLDFSHL*SSSGFE Trigger: TTCAAAACCAGAAGAACTCAAAAGGTGAGAGAAGTC...CAGCAAGTAAGTTGAAAACCACTTACAAATAAATGACCCAGCAGTATTTCTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR-3UTR CAA 90 bp | AGATATGTTCAGTCTCTAGGAATTATAAATGAAAGCTGTGAATCCCTTCTGTCGCTGCTTCCTTCTATATaGAAAACGCCATTCAATACC | + |
|
Preference number: 3 (lower is better) Translates to: RYVQSLGIINESCESLLSLLPSI*KTPFNT Trigger: GGTATTGAATGGCGTTTTCAATATAGAAGGAAGCAG...CGACAGAAGGGATTCACAGCTTTCATTTATAATTCCTAGAGACTGAACATATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR TCA 72 bp | ATTCATAAAACACACCCAAAGATGTTTCTAGCTGGTTaGAATGTCATGATTAAAGTAAGGCAAGTCACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: IHKTHPKMFLAG*NVMIKVRQVTK Trigger: TTTGGTGACTTGCCTTACTTTAATCATGACATTTCAACCAGCTAGAAACATCTTTGGGTGTGTTTTATGAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR GCA 72 bp | AATAAGGAATTAGTTCAAATGCTATCATCACTTCTATaGCCTAAATTAAAACACCTGTCTCTTAGCCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NKELVQMLSSLL*PKLKHLSLSPK Trigger: CTTTGGGCTAAGAGACAGGTGTTTTAATTTAGGGCATAGAAGTGATGATAGCATTTGAACTAATTCCTTATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR GCA 72 bp | TCTGAACTTGACTTACCAAAGAATATAAAGATTAGCTaGAGTAAATCCACATTTAAATTGGCAGGTTGCGAA | + |
|
Preference number: 3 (lower is better) Translates to: SELDLPKNIKIS*SKSTFKLAGCE Trigger: TTCGCAACCTGCCAATTTAAATGTGGATTTACTGCAGCTAATCTTTATATTCTTTGGTAAGTCAAGTTCAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| CDS-3UTR GCA 90 bp | CTGCAGCACTCTTCTGAGCTCCGAGAGCGGTCCCTTCGTGGGCGCAAGCCTCTCATGGAGCAGATCACATaGTCAGACCATCCAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQHSSELRERSLRGRKPLMEQIT*SDHPRS Trigger: GCTCCTTGGATGGTCTGAGCATGTGATCTGCTCCAT...GAGAGGCTTGCGCCCACGAAGGGACCGCTCTCGGAGCTCAGAAGAGTGCTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231200.2 |
||
| CDS-3UTR TCA 90 bp | CTGCAGCACTCTTCTGAGCTCCGAGAGCGGTCCCTTCGTGGGCGCAAGCCTCTCTGGGTTGCACCTTCCTaGAGAGCAAATACAGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQHSSELRERSLRGRKPLWVAPS*RANTAS Trigger: ACTTGCTGTATTTGCTCTTCAGGAAGGTGCAACCCA...GAGAGGCTTGCGCCCACGAAGGGACCGCTCTCGGAGCTCAGAAGAGTGCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231200.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGAGAGGCAAAAAGGAATCAGGAGTTCAGGGTCACTCTTGGCTACATTGATCATAGGATCCCACTaGGACAGGGAGAAGCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QRERQKGIRSSGSLLATLIIGSH*DREKRP Trigger: GGGCCGCTTCTCCCTGTCGCAGTGGGATCCTATGAT...CAATGTAGCCAAGAGTGACCCTGAACTCCTGATTCCTTTTTGCCTCTCCCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| CDS-3UTR TCA 90 bp | GTTCAAGCCCTGCACAGCTTACCCAGCCCCCTAAATCTATACACACACAGAAAATGGAGACAGGCCTCGTaGCTACTCCGGTCACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VQALHSLPSPLNLYTHRKWRQAS*LLRSPT Trigger: TGTTGGTGACCGGAGTAGTCACGAGGCCTGTCTCCA...TTTTCTGTGTGTGTATAGATTTAGGGGGCTGGGTAAGCTGTGCAGGGCTTGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100309.3 |
||
| CDS-3UTR GCA 90 bp | AGTTCAAGCCCTGCACAGCTTACCCAGCCCCCTAAATCTATACACACACAGAAAATCATAGGATCCCACTaGGACAGGGAGAAGCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSPAQLTQPPKSIHTQKIIGSH*DREKRP Trigger: GGGCCGCTTCTCCCTGTCGCAGTGGGATCCTATGAT...TTTCTGTGTGTGTATAGATTTAGGGGGCTGGGTAAGCTGTGCAGGGCTTGAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| CDS-3UTR GCA 90 bp | GTTCAAGCCCTGCACAGCTTACCCAGCCCCCTAAATCTATACACACACAGAAAATGCAATGAGGTGTCCTaGACAGAAGGCCGCCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VQALHSLPSPLNLYTHRKCNEVS*TEGRPD Trigger: ATCTGGGCGGCCTTCTGTGCAGGACACCTCATTGCA...TTTTCTGTGTGTGTATAGATTTAGGGGGCTGGGTAAGCTGTGCAGGGCTTGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGCTGTGAATCCCTTCTGTCGTCTCTAGACAAAGGTGATGATCATAACGCCATGGAGCAGATCACATaGTCAGACCATCCAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESCESLLSSLDKGDDHNAMEQIT*SDHPRS Trigger: GCTCCTTGGATGGTCTGAGCATGTGATCTGCTCCAT...GGCGTTATGATCATCACCTTTGTCTAGAGACGACAGAAGGGATTCACAGCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGCTGTGAATCCCTTCTGTCGTCTCTAGACAAAGGTGATGATCATAACGCCTCCTCCTTCTTCTTCTaGAGCTCAATCTTCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ESCESLLSSLDKGDDHNASSFFF*SSIFQA Trigger: AGCCTGGAAGATTGAGCTGCAGAAGAAGAAGGAGGA...GGCGTTATGATCATCACCTTTGTCTAGAGACGACAGAAGGGATTCACAGCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100309.3 |
||
| CDS-3UTR GCA 90 bp | TTCTCCGTGTGTGGTAGTTATCACCGAGAACTGAGAAACAGTGAGACATGTAGATTCACTGCACTTCTGTaGAATGAGGTGTCCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: FSVCGSYHRELRNSETCRFTALL*NEVSCT Trigger: TGTGCAGGACACCTCATTGCACAGAAGTGCAGTGAA...TCTACATGTCTCACTGTTTCTCAGTTCTCGGTGATAACTACCACACACGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100309.3 |
||
| CDS-3UTR TCA 90 bp | AGTTCAAGCCCTGCACAGCTTACCCAGCCCCCTAAATCTATACACACACAGAAAAATTCTAGTAGTTTCTaGGGAACTGTAGAAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: SSSPAQLTQPPKSIHTQKNSSSF*GTVEAT Trigger: GGTTGCTTCTACAGTTCCTCAGAAACTACTAGAATT...TTTCTGTGTGTGTATAGATTTAGGGGGCTGGGTAAGCTGTGCAGGGCTTGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100309.3 |
||
| CDS-3UTR GCA 90 bp | TTCTCCGTGTGTGGTAGTTATCACCGAGAACTGAGAAACAGTGAGACATGTAGACCGAGGTCCTATGGTTaGCATAAAGACACATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FSVCGSYHRELRNSETCRPRSYG*HKDTSN Trigger: ATTTGATGTGTCTTTATGGCAACCATAGGACCTCGG...TCTACATGTCTCACTGTTTCTCAGTTCTCGGTGATAACTACCACACACGGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100309.3 |
||
| CDS-3UTR GCA 90 bp | AACTATTTGCTGACCTCTGATCTACATTTAAAGCAATGGATAACGAACAATGCTTGCAATGAGGTGTCCTaGACAGAAGGCCGCCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NYLLTSDLHLKQWITNNACNEVS*TEGRPD Trigger: ATCTGGGCGGCCTTCTGTGCAGGACACCTCATTGCA...AGCATTGTTCGTTATCCATTGCTTTAAATGTAGATCAGAGGTCAGCAAATAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR CAA 72 bp | CACCTGTCTCTTAGCCCAAAGCCTCCAATGCACTATTaGTTACATATGTGCATCTATTCTAAGATCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLSLSPKPPMHY*LHMCIYSKIGA Trigger: AGCTCCGATCTTAGAATAGATGCACATATGTAACAAATAGTGCATTGGAGGCTTTGGGCTAAGAGACAGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| CDS-3UTR TCA 90 bp | GCTAGTCTCAAACTTAATTCTACTCACTTCCCTGGATTTACTCAAAAGAAATTCTGCACTTCTGTGCAATaGGGTGTCCTGCACAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLKLNSTHFPGFTQKKFCTSVQ*GVLHRR Trigger: CCTTCTGTGCAGGACACCTCATTGCACAGAAGTGCA...GAATTTCTTTTGAGTAAATCCAGGGAAGTGAGTAGAATTAAGTTTGAGACTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| CDS-3UTR GCA 90 bp | AGATATGTTCAGTCTCTAGGAATTATAAATGAAAGCTGTGAATCCCTTCTGTCGTACACCAGCAGAAACTaGAGCACTCTTCTGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RYVQSLGIINESCESLLSYTSRN*STLLSS Trigger: GGAGCTCAGAAGAGTGCTGCAGTTTCTGCTGGTGTA...CGACAGAAGGGATTCACAGCTTTCATTTATAATTCCTAGAGACTGAACATATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100309.3 |
||
| CDS-3UTR CCA 90 bp | TTCTCCGTGTGTGGTAGTTATCACCGAGAACTGAGAAACAGTGAGACATGTAGAGTTGACAAGATTCTCTaGATACTTGAAGAAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSVCGSYHRELRNSETCRVDKIL*ILEEAL Trigger: CAAGGCTTCTTCAAGTATCCAGAGAATCTTGTCAAC...TCTACATGTCTCACTGTTTCTCAGTTCTCGGTGATAACTACCACACACGGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100309.3 |
||
| 3UTR CAA 72 bp | GTTTTCAACTTACTTGCTGTTCTTTACAAAAGAGAGTaGGTGAGTAAGTTCAAGCCCTGCACAGCTTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: VFNLLAVLYKRE*VSKFKPCTAYP Trigger: TGGGTAAGCTGTGCAGGGCTTGAACTTACTCACCAACTCTCTTTTGTAAAGAACAGCAAGTAAGTTGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| 3UTR CAA 72 bp | ACTAAGTGTAAATATAAACCACTACTTCCACATCATTaGGGGAGATGCAGCCATAAGGGGAAAGCACAGATC | + |
|
Preference number: 4 (lower is better) Translates to: TKCKYKPLLPHH*GRCSHKGKAQI Trigger: GATCTGTGCTTTCCCCTTATGGCTGCATCTCCCCAAATGATGTGGAAGTAGTGGTTTATATTTACACTTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| CDS-3UTR TCA 90 bp | AACTATTTGCTGACCTCTGATCTACATTTAAAGCAATGGATAACGAACAATGCTTGGGTTGCACCTTCCTaGAGAGCAAATACAGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NYLLTSDLHLKQWITNNAWVAPS*RANTAS Trigger: ACTTGCTGTATTTGCTCTTCAGGAAGGTGCAACCCA...AGCATTGTTCGTTATCCATTGCTTTAAATGTAGATCAGAGGTCAGCAAATAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| CDS-3UTR TCA 90 bp | AACTATTTGCTGACCTCTGATCTACATTTAAAGCAATGGATAACGAACAATGCTGATTCTCTGGATACTTaGAGAAGCCTTGTTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NYLLTSDLHLKQWITNNADSLDT*RSLVSG Trigger: CCCAGAAACAAGGCTTCTTCAAGTATCCAGAGAATC...AGCATTGTTCGTTATCCATTGCTTTAAATGTAGATCAGAGGTCAGCAAATAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100309.3 |
||
| 3UTR CAA 72 bp | GAACTGAGAAACAGTGAGACATGTAGATGGTACAGGTaGCTTTCAAACCTTTTACCACTATCAGAAACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ELRNSETCRWYR*LSNLLPLSETN Trigger: GTTTGTTTCTGATAGTGGTAAAAGGTTTGAAAGCAACCTGTACCATCTACATGTCTCACTGTTTCTCAGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| CDS-3UTR TCA 90 bp | GCTAGTCTCAAACTTAATTCTACTCACTTCCCTGGATTTACTCAAAAGAAATTCAATAAGCAAAAAGAGTaGAGAATACAGACCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASLKLNSTHFPGFTQKKFNKQKE*RIQTQL Trigger: AAGCTGGGTCTGTATTCTTCACTCTTTTTGCTTATT...GAATTTCTTTTGAGTAAATCCAGGGAAGTGAGTAGAATTAAGTTTGAGACTAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100309.3 |
||
| 3UTR CAA 72 bp | TTTGAGATTAGGAACAAACAACCGTCCTTCAACAATTaGTCTTTTTATTCTGGAGCCAAAAATCAAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: FEIRNKQPSFNN*SFYSGAKNQGH Trigger: ATGTCCTTGATTTTTGGCTCCAGAATAAAAAGACAAATTGTTGAAGGACGGTTGTTTGTTCCTAATCTCAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| CDS GCA 90 bp | GAGAGCGGTCCCTTCGTGGGCGCAAGCCTCTCCTCCTTCTTCTTCTaGAGCTCAATCTTCCAGGCTTCACTGCACTTCTGTGCAATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ESGPFVGASLSSFFF*SSIFQASLHFCAMR Trigger: CCTCATTGCACAGAAGTGCAGTGAAGCCTGGAAGATTGAGCTGCAGAAGAAGAAGGAGGAGAGGCTTGCGCCCACGAAGGGACCGCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100309.3 |
||
| CDS-3UTR CAA 90 bp | AGTTCAAGCCCTGCACAGCTTACCCAGCCCCCTAAATCTATACACACACAGAAAGCAAGGCCGAGGTCCTaGTTTCTGGGTTGCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSSPAQLTQPPKSIHTQKARPRS*FLGCTF Trigger: GAAGGTGCAACCCAGAAACAAGGACCTCGGCCTTGC...TTTCTGTGTGTGTATAGATTTAGGGGGCTGGGTAAGCTGTGCAGGGCTTGAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231200.2 |
||
| CDS TCA 72 bp | CATGCTCAGACCATCCAAGGAGCCAGCTGGCAGGTTTaGCCACACCGACCGACACCAGATACAGGCCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: HAQTIQGASWQV*PHRPTPDTGQV Trigger: TACCTGGCCTGTATCTGGTGTCGGTCGGTGTGGTCAAACCTGCCAGCTGGCTCCTTGGATGGTCTGAGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| CDS CAA 72 bp | ACATGCTCAGACCATCCAAGGAGCCAGCTGGCAGGTTaGACCACACCGACCGACACCAGATACAGGCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TCSDHPRSQLAG*TTPTDTRYRPG Trigger: ACCTGGCCTGTATCTGGTGTCGGTCGGTGTGGTCAAACCTGCCAGCTGGCTCCTTGGATGGTCTGAGCATGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100309.3 ENSMUST00000231200.2 |
||
| CDS GCA 72 bp | CCCTTCGTGGGCGCAAGCCTCTCCTCCTTCTTCTTCTaGAGCTCAATCTTCCAGGCTTCACTGCACTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PFVGASLSSFFF*SSIFQASLHFC Trigger: ACAGAAGTGCAGTGAAGCCTGGAAGATTGAGCTGCAGAAGAAGAAGGAGGAGAGGCTTGCGCCCACGAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100309.3 |
||