Pregenerated sensors for ALG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039427Ensembl transcript IDs: ENSMUST00000049207.9, ENSMUST00000100196.9
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GCCAAACCCAGTGAACACAGGCTATCCCAGAGCTCACAGCAGAACCAGAACGCAAGAACAGAAGAGAGCTaGCAGATCAGTAGCCAGATC | + |
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Preference number: 2 (lower is better) Translates to: AKPSEHRLSQSSQQNQNARTEES*QISSQI Trigger: GATCTGGCTACTGATCTGGCAGCTCTCTTCTGTTCT...TGCGTTCTGGTTCTGCTGTGAGCTCTGGGATAGCCTGTGTTCACTGGGTTTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| 3UTR CAA 90 bp | AAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGACTGAGAAGTaGGCAGGGACACTGGAAGTAACAGAAGTGCTCAGAACAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: KGCDKSRNKNPGTEK*AGTLEVTEVLRTEE Trigger: CTCTTCTGTTCTGAGCACTTCTGTTACTTCCAGTGTCCCTGCCAACTTCTCAGTCCCTGGGTTTTTGTTTCTGGACTTGTCACATCCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| 3UTR TCA 72 bp | CTGTCAGACAGTTCAGCCTTGCTCAGCCAAACCCAGTaGACACAGGCTATCCCAGAGCTCACAGCAGAACCA | + |
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Preference number: 3 (lower is better) Translates to: LSDSSALLSQTQ*TQAIPELTAEP Trigger: TGGTTCTGCTGTGAGCTCTGGGATAGCCTGTGTTCACTGGGTTTGGCTGAGCAAGGCTGAACTGTCTGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| 3UTR GCA 72 bp | CTGGAAGTAACAGAAGTGCTCAGAACAGAAGAGAGCTaGCAGATCAGTAGCCAGATCCTAGCTGTCGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: LEVTEVLRTEES*QISSQILAVAH Trigger: GTGGGCGACAGCTAGGATCTGGCTACTGATCTGGCAGCTCTCTTCTGTTCTGAGCACTTCTGTTACTTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | GCCAAACCCAGTGAACACAGGCTATCCCAGAGCTCACAGCAGAACCAGAACGCACCCCGGCAGGAAGGGTaGCCACAGGGTGGATGGGGC | + |
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Preference number: 4 (lower is better) Translates to: AKPSEHRLSQSSQQNQNAPRQEG*PQGGWG Trigger: GCCCCATCCACCCTGTGGCCACCCTTCCTGCCGGGG...TGCGTTCTGGTTCTGCTGTGAGCTCTGGGATAGCCTGTGTTCACTGGGTTTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | CAGATCAGTAGCCAGATCCTAGCTGTCGCCCACTGCTGTCCTCAGGCTTATGACCCCCGGCAGGAAGGGTaGCCACAGGGTGGATGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QISSQILAVAHCCPQAYDPRQEG*PQGGWG Trigger: GCCCCATCCACCCTGTGGCCACCCTTCCTGCCGGGG...GTCATAAGCCTGAGGACAGCAGTGGGCGACAGCTAGGATCTGGCTACTGATCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR TCA 90 bp | CAGATCAGTAGCCAGATCCTAGCTGTCGCCCACTGCTGTCCTCAGGCTTATGACGCCGCTCTGGGCCAATaGCAGCGCGTGGTACTGCAT | + |
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Preference number: 4 (lower is better) Translates to: QISSQILAVAHCCPQAYDAALGQ*QRVVLH Trigger: ATGCAGTACCACGCGCTGTCATTGGCCCAGAGCGGC...GTCATAAGCCTGAGGACAGCAGTGGGCGACAGCTAGGATCTGGCTACTGATCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR GCA 90 bp | GAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGACTGAGACTGCATGCGGGGGCTaGGGCCCACGTCGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EPERKGCDKSRNKNPGTETACGG*GPRRPA Trigger: TGCTGGGCGACGTGGGCCGCAGCCCCCGCATGCAGT...CTCAGTCCCTGGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR GCA 90 bp | AAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCAGCCAAACCCAGTGAACGACAGCGCGTGGTACTaGATGCGGGGGCTGCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: KYDCPVRQFSLAQPNPVNDSAWY*MRGLRP Trigger: GGGCCGCAGCCCCCGCATGCAGTACCACGCGCTGTC...GTTCACTGGGTTTGGCTGAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR GCA 90 bp | CTCACAGCAGAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAACTGCATGCGGGGGCTaGGGCCCACGTCGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTAEPERKGCDKSRNKNPTACGG*GPRRPA Trigger: TGCTGGGCGACGTGGGCCGCAGCCCCCGCATGCAGT...TGGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTCTGCTGTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR GCA 90 bp | CAGAGCTCACAGCAGAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAGACAGCGCGTGGTACTaGATGCGGGGGCTGCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QSSQQNQNARDVTSPETKDSAWY*MRGLRP Trigger: GGGCCGCAGCCCCCGCATGCAGTACCACGCGCTGTC...TTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTCTGCTGTGAGCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | GCCAAACCCAGTGAACACAGGCTATCCCAGAGCTCACAGCAGAACCAGAACGCAACCGAAAAGCCGCTCTaGGCCAATGACAGCGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AKPSEHRLSQSSQQNQNATEKPL*ANDSAW Trigger: CCACGCGCTGTCATTGGCCCAGAGCGGCTTTTCGGT...TGCGTTCTGGTTCTGCTGTGAGCTCTGGGATAGCCTGTGTTCACTGGGTTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR TCA 90 bp | CAGATCAGTAGCCAGATCCTAGCTGTCGCCCACTGCTGTCCTCAGGCTTATGACCAGAACCGGACGTGCTaGAGGTGCTTCTGGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: QISSQILAVAHCCPQAYDQNRTC*RCFWLM Trigger: CATCAGCCAGAAGCACCTTCAGCACGTCCGGTTCTG...GTCATAAGCCTGAGGACAGCAGTGGGCGACAGCTAGGATCTGGCTACTGATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | GGCAGGGACACTGGAAGTAACAGAAGTGCTCAGAACAGAAGAGAGCTGCCAGATTGGCCACAGGGTGGATaGGGCCTGGGGGTCATCTGT | + |
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Preference number: 4 (lower is better) Translates to: GRDTGSNRSAQNRRELPDWPQGG*GLGVIC Trigger: ACAGATGACCCCCAGGCCCCATCCACCCTGTGGCCA...ATCTGGCAGCTCTCTTCTGTTCTGAGCACTTCTGTTACTTCCAGTGTCCCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | AAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCAGCCAAACCCAGTGAACAGGGTGGCCACAGGGTaGATGGGGCCTGGGGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: KYDCPVRQFSLAQPNPVNRVATG*MGPGGH Trigger: ATGACCCCCAGGCCCCATCCACCCTGTGGCCACCCT...GTTCACTGGGTTTGGCTGAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR TCA 90 bp | CAGATCAGTAGCCAGATCCTAGCTGTCGCCCACTGCTGTCCTCAGGCTTATGACGCTCGTGCAGACACTTaGAGTTCACGGCACACACAG | + |
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Preference number: 4 (lower is better) Translates to: QISSQILAVAHCCPQAYDARADT*SSRHTQ Trigger: CTGTGTGTGCCGTGAACTTCAAGTGTCTGCACGAGC...GTCATAAGCCTGAGGACAGCAGTGGGCGACAGCTAGGATCTGGCTACTGATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | CTCACAGCAGAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGTGGCGGGGGCCATaGACCAAGCCCATGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTAEPERKGCDKSRNKNPGWRGP*TKPMME Trigger: CTCCATCATGGGCTTGGTCCATGGCCCCCGCCACCC...TGGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTCTGCTGTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | GAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGACTGAGAGCAGCACAATGGGGTaGCGGGGGCCATGGACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EPERKGCDKSRNKNPGTESSTMG*RGPWTK Trigger: CTTGGTCCATGGCCCCCGCCACCCCATTGTGCTGCT...CTCAGTCCCTGGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | AAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCAGCCAAACCCAGTGAACAGCAGCACAATGGGGTaGCGGGGGCCATGGACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KYDCPVRQFSLAQPNPVNSSTMG*RGPWTK Trigger: CTTGGTCCATGGCCCCCGCCACCCCATTGTGCTGCT...GTTCACTGGGTTTGGCTGAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | CTCACAGCAGAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAAGGGTGGCCACAGGGTaGATGGGGCCTGGGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTAEPERKGCDKSRNKNPRVATG*MGPGGH Trigger: ATGACCCCCAGGCCCCATCCACCCTGTGGCCACCCT...TGGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTCTGCTGTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR TCA 90 bp | CTCACAGCAGAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGCCGCTCTGGGCCAATaGCAGCGCGTGGTACTGCAT | + |
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Preference number: 4 (lower is better) Translates to: LTAEPERKGCDKSRNKNPAALGQ*QRVVLH Trigger: ATGCAGTACCACGCGCTGTCATTGGCCCAGAGCGGC...TGGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTCTGCTGTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR TCA 90 bp | GCAGGGACACTGGAAGTAACAGAAGTGCTCAGAACAGAAGAGAGCTGCCAGATCCAGAACCGGACGTGCTaGAGGTGCTTCTGGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: AGTLEVTEVLRTEESCQIQNRTC*RCFWLM Trigger: CATCAGCCAGAAGCACCTTCAGCACGTCCGGTTCTG...GATCTGGCAGCTCTCTTCTGTTCTGAGCACTTCTGTTACTTCCAGTGTCCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR GCA 90 bp | AAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCAGCCAAACCCAGTGAACCTCTCATCCCAGCGTTaGTGCCCCGACTCCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: KYDCPVRQFSLAQPNPVNLSSQR*CPDSCS Trigger: ACTGCAGGAGTCGGGGCAGCAACGCTGGGATGAGAG...GTTCACTGGGTTTGGCTGAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | GGCAGGGACACTGGAAGTAACAGAAGTGCTCAGAACAGAAGAGAGCTGCCAGATACACACAGGTTCAGGTaGGACAGGCGCCCGAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: GRDTGSNRSAQNRRELPDTHRFR*DRRPKN Trigger: GTTCTTCGGGCGCCTGTCCCACCTGAACCTGTGTGT...ATCTGGCAGCTCTCTTCTGTTCTGAGCACTTCTGTTACTTCCAGTGTCCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | GAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGACTGAGAGGGTGGATGGGGCCTaGGGGTCATCTGTGAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: EPERKGCDKSRNKNPGTERVDGA*GSSVSE Trigger: CTCACTCACAGATGACCCCCAGGCCCCATCCACCCT...CTCAGTCCCTGGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | AACAAAAACCCAGGGACTGAGAAGTTGGCAGGGACACTGGAAGTAACAGAAGTGTGGCCACAGGGTGGATaGGGCCTGGGGGTCATCTGT | + |
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Preference number: 4 (lower is better) Translates to: NKNPGTEKLAGTLEVTEVWPQGG*GLGVIC Trigger: ACAGATGACCCCCAGGCCCCATCCACCCTGTGGCCA...CACTTCTGTTACTTCCAGTGTCCCTGCCAACTTCTCAGTCCCTGGGTTTTTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR TCA 90 bp | CAGATCAGTAGCCAGATCCTAGCTGTCGCCCACTGCTGTCCTCAGGCTTATGACCATGGACCAAGCCCATaGTGGAGTAGCCATAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: QISSQILAVAHCCPQAYDHGPSP*WSSHSC Trigger: ACAACTATGGCTACTCCATCATGGGCTTGGTCCATG...GTCATAAGCCTGAGGACAGCAGTGGGCGACAGCTAGGATCTGGCTACTGATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | AACAAAAACCCAGGGACTGAGAAGTTGGCAGGGACACTGGAAGTAACAGAAGTGACCGAAAAGCCGCTCTaGGCCAATGACAGCGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: NKNPGTEKLAGTLEVTEVTEKPL*ANDSAW Trigger: CCACGCGCTGTCATTGGCCCAGAGCGGCTTTTCGGT...CACTTCTGTTACTTCCAGTGTCCCTGCCAACTTCTCAGTCCCTGGGTTTTTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | GAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGACTGAGACACACAGGTTCAGGTaGGACAGGCGCCCGAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: EPERKGCDKSRNKNPGTETHRFR*DRRPKN Trigger: GTTCTTCGGGCGCCTGTCCCACCTGAACCTGTGTGT...CTCAGTCCCTGGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | CTCACAGCAGAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAAGGGTGGATGGGGCCTaGGGGTCATCTGTGAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LTAEPERKGCDKSRNKNPRVDGA*GSSVSE Trigger: CTCACTCACAGATGACCCCCAGGCCCCATCCACCCT...TGGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTCTGCTGTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR GCA 90 bp | AAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCAGCCAAACCCAGTGAACCATCTGCAGCTGAGCTaGCAGCTCCTCAGCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: KYDCPVRQFSLAQPNPVNHLQLS*QLLSIL Trigger: AAGGATGCTGAGGAGCTGGCAGCTCAGCTGCAGATG...GTTCACTGGGTTTGGCTGAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | GGCAGGGACACTGGAAGTAACAGAAGTGCTCAGAACAGAAGAGAGCTGCCAGATACCTTGACTCCATACTaGAGAATTCGGGGCCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: GRDTGSNRSAQNRRELPDTLTPY*RIRGPV Trigger: CACTGGGCCCCGAATTCTCCAGTATGGAGTCAAGGT...ATCTGGCAGCTCTCTTCTGTTCTGAGCACTTCTGTTACTTCCAGTGTCCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049207.9 |
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| CDS-3UTR GCA 90 bp | TTATTAAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCAGCCAAACCCAGCTTCCAGCCATGGGGTaGAGAACCGGACGTGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LLSMTVLSDSSALLSQTQLPAMG*RTGRAE Trigger: TTCAGCACGTCCGGTTCTGCACCCCATGGCTGGAAG...CTGGGTTTGGCTGAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTTAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR GCA 90 bp | GAAGTAACAGAAGTGCTCAGAACAGAAGAGAGCTGCCAGATCAGTAGCCAGATCCATCTGCAGCTGAGCTaGCAGCTCCTCAGCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: EVTEVLRTEESCQISSQIHLQLS*QLLSIL Trigger: AAGGATGCTGAGGAGCTGGCAGCTCAGCTGCAGATG...GATCTGGCTACTGATCTGGCAGCTCTCTTCTGTTCTGAGCACTTCTGTTACTTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | CTGGAAGTAACAGAAGTGCTCAGAACAGAAGAGAGCTGCCAGATCAGTAGCCAGGGATCTGAGCAGCTCTaGAAAGGAGAGTACGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LEVTEVLRTEESCQISSQGSEQL*KGEYVW Trigger: CCACACGTACTCTCCTTTCCAGAGCTGCTCAGATCC...CTGGCTACTGATCTGGCAGCTCTCTTCTGTTCTGAGCACTTCTGTTACTTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR GCA 90 bp | CCAAACCCAGTGAACACAGGCTATCCCAGAGCTCACAGCAGAACCAGAACGCAATGTCTTACTAGCTCGTaGAGACACTTGAAGTTCACG | + |
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Preference number: 4 (lower is better) Translates to: PNPVNTGYPRAHSRTRTQCLTSS*RHLKFT Trigger: CGTGAACTTCAAGTGTCTGCACGAGCTAGTAAGACA...TTGCGTTCTGGTTCTGCTGTGAGCTCTGGGATAGCCTGTGTTCACTGGGTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | GAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGACTGAGAATAGCAGGCAGACCTaGAGGGTTCTGGAGGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: EPERKGCDKSRNKNPGTENSRQT*RVLEED Trigger: ATCTTCCTCCAGAACCCTCCAGGTCTGCCTGCTATT...CTCAGTCCCTGGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | CAGAGCTCACAGCAGAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAGGATCTGAGCAGCTCTaGAAAGGAGAGTACGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: QSSQQNQNARDVTSPETKGSEQL*KGEYVW Trigger: CCACACGTACTCTCCTTTCCAGAGCTGCTCAGATCC...TTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTCTGCTGTGAGCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR TCA 90 bp | AACAAAAACCCAGGGACTGAGAAGTTGGCAGGGACACTGGAAGTAACAGAAGTGCATGGACCAAGCCCATaGTGGAGTAGCCATAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: NKNPGTEKLAGTLEVTEVHGPSP*WSSHSC Trigger: ACAACTATGGCTACTCCATCATGGGCTTGGTCCATG...CACTTCTGTTACTTCCAGTGTCCCTGCCAACTTCTCAGTCCCTGGGTTTTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR GCA 90 bp | TTGGCAGGGACACTGGAAGTAACAGAAGTGCTCAGAACAGAAGAGAGCTGCCAGCCACAGCAAGTACACTaGCTGAAATACAACCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: LAGTLEVTEVLRTEESCQPQQVH*LKYNLD Trigger: GTCAAGGTTGTATTTCAGGCAGTGTACTTGCTGTGG...CTGGCAGCTCTCTTCTGTTCTGAGCACTTCTGTTACTTCCAGTGTCCCTGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR GCA 90 bp | GAAGTAACAGAAGTGCTCAGAACAGAAGAGAGCTGCCAGATCAGTAGCCAGATCATAAAGAGTTCATGCTaGAGGTCCAGGGGTGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: EVTEVLRTEESCQISSQIIKSSC*RSRGVS Trigger: GGAGACACCCCTGGACCTGCAGCATGAACTCTTTAT...GATCTGGCTACTGATCTGGCAGCTCTCTTCTGTTCTGAGCACTTCTGTTACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR GCA 90 bp | GAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGACTGAGTTCATAAAGAGTTCATaGTGCAGGTCCAGGGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: EPERKGCDKSRNKNPGTEFIKSS*CRSRGV Trigger: GACACCCCTGGACCTGCAGCATGAACTCTTTATGAA...CTCAGTCCCTGGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | ATATATACATTTATTAAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCAGTGGCCAGCAGCACAATaGGGTGGCGGGGGCCATGGA | + |
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Preference number: 4 (lower is better) Translates to: IYTFIKYDCPVRQFSLAQWPAAQ*GGGGHG Trigger: TCCATGGCCCCCGCCACCCCATTGTGCTGCTGGCCA...CTGAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTTAATAAATGTATATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR CCA 90 bp | GAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGACTGAGACTTCTCATACCATTTaGCCAGCAGCACAATGGGGT | + |
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Preference number: 4 (lower is better) Translates to: EPERKGCDKSRNKNPGTETSHTI*PAAQWG Trigger: ACCCCATTGTGCTGCTGGCCAAATGGTATGAGAAGT...CTCAGTCCCTGGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS-3UTR GCA 90 bp | TTATTAAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCAGCCAAACCCAGATAAAGAGTTCATGCTaGAGGTCCAGGGGTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLSMTVLSDSSALLSQTQIKSSC*RSRGVS Trigger: GGAGACACCCCTGGACCTGCAGCATGAACTCTTTAT...CTGGGTTTGGCTGAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTTAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS-3UTR GCA 90 bp | CTGGAAGTAACAGAAGTGCTCAGAACAGAAGAGAGCTGCCAGATCAGTAGCCAGGCTGTCTCCAGTGAGTaGTTGTTGCTCAAACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEVTEVLRTEESCQISSQAVSSE*LLLKLF Trigger: GAAAAGTTTGAGCAACAAGCACTCACTGGAGACAGC...CTGGCTACTGATCTGGCAGCTCTCTTCTGTTCTGAGCACTTCTGTTACTTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS-3UTR CCA 90 bp | TTATTAAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCAGCCAAACCCAGAATAGCAGGCAGACCTaGAGGGTTCTGGAGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLSMTVLSDSSALLSQTQNSRQT*RVLEED Trigger: ATCTTCCTCCAGAACCCTCCAGGTCTGCCTGCTATT...CTGGGTTTGGCTGAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTTAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS-3UTR CCA 90 bp | AAATATATACATTTATTAAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCGGGTGGCGGGGGCCATaGACCAAGCCCATGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KYIHLLSMTVLSDSSALLGWRGP*TKPMME Trigger: CTCCATCATGGGCTTGGTCCATGGCCCCCGCCACCC...GAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTTAATAAATGTATATATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS-3UTR CCA 90 bp | AAATATATACATTTATTAAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCTGGCCAGCAGCACAATaGGGTGGCGGGGGCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: KYIHLLSMTVLSDSSALLWPAAQ*GGGGHG Trigger: TCCATGGCCCCCGCCACCCCATTGTGCTGCTGGCCA...GAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTTAATAAATGTATATATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS-3UTR GCA 90 bp | CTCACAGCAGAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCATGTCTTACTAGCTCGTaGAGACACTTGAAGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: LTAEPERKGCDKSRNKNPCLTSS*RHLKFT Trigger: CGTGAACTTCAAGTGTCTGCACGAGCTAGTAAGACA...TGGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTCTGCTGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS-3UTR GCA 90 bp | TTATTAAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCAGCCAAACCCAGGCTGTCTCCAGTGAGTaGTTGTTGCTCAAACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLSMTVLSDSSALLSQTQAVSSE*LLLKLF Trigger: GAAAAGTTTGAGCAACAAGCACTCACTGGAGACAGC...CTGGGTTTGGCTGAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTTAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS-3UTR GCA 90 bp | AAATATATACATTTATTAAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCCTCTCATCCCAGCGTTaGTGCCCCGACTCCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KYIHLLSMTVLSDSSALLLSSQR*CPDSCS Trigger: ACTGCAGGAGTCGGGGCAGCAACGCTGGGATGAGAG...GAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTTAATAAATGTATATATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS-3UTR CCA 90 bp | TATACATTTATTAAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCAGCCAACCTTGACTCCATACTaGAGAATTCGGGGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YTFIKYDCPVRQFSLAQPTLTPY*RIRGPA Trigger: AGCTGGGCCCCGAATTCTCCAGTATGGAGTCAAGGT...TGGCTGAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTTAATAAATGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100196.9 |
||
| CDS-3UTR TCA 90 bp | ATATATACATTTATTAAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCAGGCTCGTGCAGACACTTaGAGTTCACGGCACACACAG | + |
|
Preference number: 4 (lower is better) Translates to: IYTFIKYDCPVRQFSLAQARADT*SSRHTQ Trigger: CTGTGTGTGCCGTGAACTTCAAGTGTCTGCACGAGC...CTGAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTTAATAAATGTATATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS-3UTR TCA 90 bp | ATATATACATTTATTAAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCAGGGAGGCTGTCTCCAGTaGGTGCTTGTTGCTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: IYTFIKYDCPVRQFSLAQGGCLQ*VLVAQT Trigger: AGTTTGAGCAACAAGCACTCACTGGAGACAGCCTCC...CTGAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTTAATAAATGTATATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS-3UTR GCA 90 bp | TATACATTTATTAAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCAGCCATTCATAAAGAGTTCATaGTGCAGGTCCAGGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YTFIKYDCPVRQFSLAQPFIKSS*CRSRGV Trigger: GACACCCCTGGACCTGCAGCATGAACTCTTTATGAA...TGGCTGAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTTAATAAATGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS-3UTR CCA 90 bp | AAATATATACATTTATTAAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCACTTCTCATACCATTTaGCCAGCAGCACAATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KYIHLLSMTVLSDSSALLTSHTI*PAAQWG Trigger: ACCCCATTGTGCTGCTGGCCAAATGGTATGAGAAGT...GAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTTAATAAATGTATATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS GCA 90 bp | ATGCGGGGGCTGCGGCCCACGTCGCCCAGCACCACGACGACCATGTaGCGGGCCCTGCCCGTTTGCCGCCCACGCTTCCACAAGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MRGLRPTSPSTTTTM*RALPVCRPRFHKPS Trigger: GCTGGGCTTGTGGAAGCGTGGGCGGCAAACGGGCAGGGCCCGGCACATGGTCGTCGTGGTGCTGGGCGACGTGGGCCGCAGCCCCCGCAT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS GCA 90 bp | AGCCGCTCTGGGCCAATGACAGCGCGTGGTACTGCATGCGGGGGCTaGGGCCCACGTCGCCCAGCACCACGACGACCATGTGCCGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SRSGPMTARGTACGG*GPRRPAPRRPCAGP Trigger: GGGCCCGGCACATGGTCGTCGTGGTGCTGGGCGACGTGGGCCGCAGCCCCCGCATGCAGTACCACGCGCTGTCATTGGCCCAGAGCGGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS GCA 90 bp | TGCGGCCCACGTCGCCCAGCACCACGACGACCATGTGCCGGGCCCTaGCCGTTTGCCGCCCACGCTTCCACAAGCCCAGCAGCAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: CGPRRPAPRRPCAGP*PFAAHASTSPAAAP Trigger: TGGTGCTGCTGCTGGGCTTGTGGAAGCGTGGGCGGCAAACGGGCAGGGCCCGGCACATGGTCGTCGTGGTGCTGGGCGACGTGGGCCGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS CCA 90 bp | CCCAGCAGCGTCACCGAAAAGCCGCTCTGGGCCAATGACAGCGCGTaGTACTGCATGCGGGGGCTGCGGCCCACGTCGCCCAGCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: PSSVTEKPLWANDSA*YCMRGLRPTSPSTT Trigger: CGTGGTGCTGGGCGACGTGGGCCGCAGCCCCCGCATGCAGTACCACGCGCTGTCATTGGCCCAGAGCGGCTTTTCGGTGACGCTGCTGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS GCA 90 bp | ACGTCGCCCAGCACCACGACGACCATGTGCCGGGCCCTGCCCGTTTaGCGCCCACGCTTCCACAAGCCCAGCAGCAGCACCAGCAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: TSPSTTTTMCRALPV*RPRFHKPSSSTSNS Trigger: GCTGTTGCTGGTGCTGCTGCTGGGCTTGTGGAAGCGTGGGCGGCAAACGGGCAGGGCCCGGCACATGGTCGTCGTGGTGCTGGGCGACGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS GCA 90 bp | AGCGTCACCGAAAAGCCGCTCTGGGCCAATGACAGCGCGTGGTACTaGATGCGGGGGCTGCGGCCCACGTCGCCCAGCACCACGACGACC | + |
|
Preference number: 5 (lower is better) Translates to: SVTEKPLWANDSAWY*MRGLRPTSPSTTTT Trigger: GGTCGTCGTGGTGCTGGGCGACGTGGGCCGCAGCCCCCGCATGCAGTACCACGCGCTGTCATTGGCCCAGAGCGGCTTTTCGGTGACGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS CCA 90 bp | ACAGGTTCAGGTGGGACAGGCGCCCGAAGAACTTCTCATACCATTTaGCCAGCAGCACAATGGGGTGGCGGGGGCCATGGACCAAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TGSGGTGARRTSHTI*PAAQWGGGGHGPSP Trigger: TGGGCTTGGTCCATGGCCCCCGCCACCCCATTGTGCTGCTGGCCAAATGGTATGAGAAGTTCTTCGGGCGCCTGTCCCACCTGAACCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS CCA 90 bp | TCTGCCAGGTCCTCCCGCATAGCATTGGTCACACACAGGTTCAGGTaGGACAGGCGCCCGAAGAACTTCTCATACCATTTGGCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SARSSRIALVTHRFR*DRRPKNFSYHLASS Trigger: GCTGCTGGCCAAATGGTATGAGAAGTTCTTCGGGCGCCTGTCCCACCTGAACCTGTGTGTGACCAATGCTATGCGGGAGGACCTGGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS GCA 90 bp | GGCAATAGCAGGCAGACCTGGAGGGTTCTGGAGGAAGATGTAGGCTaGAGGGTCCATGCGCATCATCTTCCACAGCAAGTACACTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GNSRQTWRVLEEDVG*RVHAHHLPQQVHCL Trigger: CAGGCAGTGTACTTGCTGTGGAAGATGATGCGCATGGACCCTGCAGCCTACATCTTCCTCCAGAACCCTCCAGGTCTGCCTGCTATTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS TCA 90 bp | TGCGCATCATCTTCCACAGCAAGTACACTGCCTGAAATACAACCTTaGCTCCATACTGGAGAATTCGGGGCCCAGCTCCCAGGCCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: CASSSTASTLPEIQP*LHTGEFGAQLPGPA Trigger: TGCGGGGCCTGGGAGCTGGGCCCCGAATTCTCCAGTATGGAGTCAAGGTTGTATTTCAGGCAGTGTACTTGCTGTGGAAGATGATGCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100196.9 |
||
| CDS-3UTR CAA 90 bp | CCAAACCCAGTGAACACAGGCTATCCCAGAGCTCACAGCAGAACCAGAACGCAATCCTCCCGCATAGCATaGGTCACACACAGGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PNPVNTGYPRAHSRTRTQSSRIA*VTHRFR Trigger: CCTGAACCTGTGTGTGACCAATGCTATGCGGGAGGA...TTGCGTTCTGGTTCTGCTGTGAGCTCTGGGATAGCCTGTGTTCACTGGGTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS TCA 90 bp | GCTGCAGGGTCCATGCGCATCATCTTCCACAGCAAGTACACTGCCTaGAATACAACCTTGACTCCATACTGGAGAATTCGGGGCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: AAGSMRIIFHSKYTA*NTTLTPYWRIRGPV Trigger: CACTGGGCCCCGAATTCTCCAGTATGGAGTCAAGGTTGTATTTCAGGCAGTGTACTTGCTGTGGAAGATGATGCGCATGGACCCTGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049207.9 |
||
| CDS TCA 90 bp | GCTGCAGGGTCCATGCGCATCATCTTCCACAGCAAGTACACTGCCTaGAATACAACCTTGACTCCATACTGGAGAATTCGGGGCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AAGSMRIIFHSKYTA*NTTLTPYWRIRGPA Trigger: AGCTGGGCCCCGAATTCTCCAGTATGGAGTCAAGGTTGTATTTCAGGCAGTGTACTTGCTGTGGAAGATGATGCGCATGGACCCTGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100196.9 |
||
| CDS GCA 90 bp | GTAGGCTGCAGGGTCCATGCGCATCATCTTCCACAGCAAGTACACTaGCTGAAATACAACCTTGACTCCATACTGGAGAATTCGGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VGCRVHAHHLPQQVH*LKYNLDSILENSGP Trigger: GGGCCCCGAATTCTCCAGTATGGAGTCAAGGTTGTATTTCAGGCAGTGTACTTGCTGTGGAAGATGATGCGCATGGACCCTGCAGCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS TCA 90 bp | TGCGCATCATCTTCCACAGCAAGTACACTGCCTGAAATACAACCTTaGCTCCATACTGGAGAATTCGGGGCCCAGTGTAGAACCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CASSSTASTLPEIQP*LHTGEFGAQCRTPA Trigger: TGCTGGGGTTCTACACTGGGCCCCGAATTCTCCAGTATGGAGTCAAGGTTGTATTTCAGGCAGTGTACTTGCTGTGGAAGATGATGCGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049207.9 |
||
| CDS CCA 90 bp | TCACAATCCGAATCCTATCATTCTGCAAGAGTTCATCTCGAGGTTTaGAGTTGTAGAACCCCAGCAGCGTCACCGAAAAGCCGCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQSESYHSARVHLEV*SCRTPAASPKSRSG Trigger: CCCAGAGCGGCTTTTCGGTGACGCTGCTGGGGTTCTACAACTCCAAACCTCGAGATGAACTCTTGCAGAATGATAGGATTCGGATTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100196.9 |
||
| CDS-3UTR CAA 90 bp | GGGACACTGGAAGTAACAGAAGTGCTCAGAACAGAAGAGAGCTGCCAGATCAGTAGCTCGTGCAGACACTaGAAGTTCACGGCACACACA | + |
|
Preference number: 5 (lower is better) Translates to: GTLEVTEVLRTEESCQISSSCRH*KFTAHT Trigger: TGTGTGTGCCGTGAACTTCAAGTGTCTGCACGAGCT...ACTGATCTGGCAGCTCTCTTCTGTTCTGAGCACTTCTGTTACTTCCAGTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS-3UTR CAA 90 bp | TTATTAAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCAGCCAAACCCAGAGCTCGTGCAGACACTaGAAGTTCACGGCACACACA | + |
|
Preference number: 5 (lower is better) Translates to: LLSMTVLSDSSALLSQTQSSCRH*KFTAHT Trigger: TGTGTGTGCCGTGAACTTCAAGTGTCTGCACGAGCT...CTGGGTTTGGCTGAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTTAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS-3UTR CAA 90 bp | TATATACATTTATTAAGTATGACTGTCCTGTCAGACAGTTCAGCCTTGCTCAGCTCCTCCCGCATAGCATaGGTCACACACAGGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YIHLLSMTVLSDSSALLSSSRIA*VTHRFR Trigger: CCTGAACCTGTGTGTGACCAATGCTATGCGGGAGGA...GCTGAGCAAGGCTGAACTGTCTGACAGGACAGTCATACTTAATAAATGTATATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS GCA 72 bp | CGTCGCCCAGCACCACGACGACCATGTGCCGGGCCCTaGCCGTTTGCCGCCCACGCTTCCACAAGCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRPAPRRPCAGP*PFAAHASTSPA Trigger: TGCTGGGCTTGTGGAAGCGTGGGCGGCAAACGGGCAGGGCCCGGCACATGGTCGTCGTGGTGCTGGGCGACG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS CAA 90 bp | CACGTCGCCCAGCACCACGACGACCATGTGCCGGGCCCTGCCCGTTaGCCGCCCACGCTTCCACAAGCCCAGCAGCAGCACCAGCAACAG | + |
|
Preference number: 6 (lower is better) Translates to: HVAQHHDDHVPGPAR*PPTLPQAQQQHQQQ Trigger: CTGTTGCTGGTGCTGCTGCTGGGCTTGTGGAAGCGTGGGCGGCAAACGGGCAGGGCCCGGCACATGGTCGTCGTGGTGCTGGGCGACGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS GCA 72 bp | AGCACCACGACGACCATGTGCCGGGCCCTGCCCGTTTaGCGCCCACGCTTCCACAAGCCCAGCAGCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: STTTTMCRALPV*RPRFHKPSSST Trigger: GGTGCTGCTGCTGGGCTTGTGGAAGCGTGGGCGGCAAACGGGCAGGGCCCGGCACATGGTCGTCGTGGTGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS GCA 72 bp | GGGCCAATGACAGCGCGTGGTACTGCATGCGGGGGCTaGGGCCCACGTCGCCCAGCACCACGACGACCATGT | + |
|
Preference number: 6 (lower is better) Translates to: GPMTARGTACGG*GPRRPAPRRPC Trigger: ACATGGTCGTCGTGGTGCTGGGCGACGTGGGCCGCAGCCCCCGCATGCAGTACCACGCGCTGTCATTGGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS GCA 72 bp | GAAAAGCCGCTCTGGGCCAATGACAGCGCGTGGTACTaGATGCGGGGGCTGCGGCCCACGTCGCCCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: EKPLWANDSAWY*MRGLRPTSPST Trigger: GGTGCTGGGCGACGTGGGCCGCAGCCCCCGCATGCAGTACCACGCGCTGTCATTGGCCCAGAGCGGCTTTTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS CCA 72 bp | GTCACCGAAAAGCCGCTCTGGGCCAATGACAGCGCGTaGTACTGCATGCGGGGGCTGCGGCCCACGTCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VTEKPLWANDSA*YCMRGLRPTSP Trigger: GGGCGACGTGGGCCGCAGCCCCCGCATGCAGTACCACGCGCTGTCATTGGCCCAGAGCGGCTTTTCGGTGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS CAA 72 bp | CAGCACCACGACGACCATGTGCCGGGCCCTGCCCGTTaGCCGCCCACGCTTCCACAAGCCCAGCAGCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: QHHDDHVPGPAR*PPTLPQAQQQH Trigger: GTGCTGCTGCTGGGCTTGTGGAAGCGTGGGCGGCAAACGGGCAGGGCCCGGCACATGGTCGTCGTGGTGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS CAA 90 bp | CACAGGTTCAGGTGGGACAGGCGCCCGAAGAACTTCTCATACCATTaGGCCAGCAGCACAATGGGGTGGCGGGGGCCATGGACCAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HRFRWDRRPKNFSYH*ASSTMGWRGPWTKP Trigger: GGGCTTGGTCCATGGCCCCCGCCACCCCATTGTGCTGCTGGCCAAATGGTATGAGAAGTTCTTCGGGCGCCTGTCCCACCTGAACCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS CAA 72 bp | ACACACCAGTTCTCTGCCAGGTCCTCCCGCATAGCATaGGTCACACACAGGTTCAGGTGGGACAGGCGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: THQFSARSSRIA*VTHRFRWDRRP Trigger: CGGGCGCCTGTCCCACCTGAACCTGTGTGTGACCAATGCTATGCGGGAGGACCTGGCAGAGAACTGGTGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS CCA 72 bp | GCCCACAAACCAGCAGACGGCAATAGCAGGCAGACCTaGAGGGTTCTGGAGGAAGATGTAGGCTGCAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: AHKPADGNSRQT*RVLEEDVGCRV Trigger: GACCCTGCAGCCTACATCTTCCTCCAGAACCCTCCAGGTCTGCCTGCTATTGCCGTCTGCTGGTTTGTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS CAA 90 bp | ACAGCCCTGACACACCAGTTCTCTGCCAGGTCCTCCCGCATAGCATaGGTCACACACAGGTTCAGGTGGGACAGGCGCCCGAAGAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: TALTHQFSARSSRIA*VTHRFRWDRRPKNF Trigger: GAAGTTCTTCGGGCGCCTGTCCCACCTGAACCTGTGTGTGACCAATGCTATGCGGGAGGACCTGGCAGAGAACTGGTGTGTCAGGGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS GCA 72 bp | GTCGTAGAGCGTCACAGCCCTGACACACCAGTTCTCTaGCAGGTCCTCCCGCATAGCATTGGTCACACACAG | + |
|
Preference number: 6 (lower is better) Translates to: VVERHSPDTPVL*QVLPHSIGHTQ Trigger: CTGTGTGTGACCAATGCTATGCGGGAGGACCTGGCAGAGAACTGGTGTGTCAGGGCTGTGACGCTCTACGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
||
| CDS GCA 72 bp | AGGCAGACCTGGAGGGTTCTGGAGGAAGATGTAGGCTaGAGGGTCCATGCGCATCATCTTCCACAGCAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: RQTWRVLEEDVG*RVHAHHLPQQV Trigger: TACTTGCTGTGGAAGATGATGCGCATGGACCCTGCAGCCTACATCTTCCTCCAGAACCCTCCAGGTCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS CCA 72 bp | TCCTCCCGCATAGCATTGGTCACACACAGGTTCAGGTaGGACAGGCGCCCGAAGAACTTCTCATACCATTTG | + |
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Preference number: 6 (lower is better) Translates to: SSRIALVTHRFR*DRRPKNFSYHL Trigger: CAAATGGTATGAGAAGTTCTTCGGGCGCCTGTCCCACCTGAACCTGTGTGTGACCAATGCTATGCGGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS TCA 72 bp | TCTTCCACAGCAAGTACACTGCCTGAAATACAACCTTaGCTCCATACTGGAGAATTCGGGGCCCAGCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SSTASTLPEIQP*LHTGEFGAQLP Trigger: TGGGAGCTGGGCCCCGAATTCTCCAGTATGGAGTCAAGGTTGTATTTCAGGCAGTGTACTTGCTGTGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100196.9 |
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| CDS GCA 72 bp | ACGAGGGAAGGGAGGCTGTCTCCAGTGAGTGCTTGTTaGTCAAACTTTTCTAATGCTCGAAGCAGGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: TREGRLSPVSAC*SNFSNARSRME Trigger: CTCCATCCTGCTTCGAGCATTAGAAAAGTTTGAGCAACAAGCACTCACTGGAGACAGCCTCCCTTCCCTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS TCA 72 bp | TCTTCCACAGCAAGTACACTGCCTGAAATACAACCTTaGCTCCATACTGGAGAATTCGGGGCCCAGTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: SSTASTLPEIQP*LHTGEFGAQCR Trigger: TCTACACTGGGCCCCGAATTCTCCAGTATGGAGTCAAGGTTGTATTTCAGGCAGTGTACTTGCTGTGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049207.9 |
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| CDS TCA 72 bp | TCCATGCGCATCATCTTCCACAGCAAGTACACTGCCTaGAATACAACCTTGACTCCATACTGGAGAATTCGG | + |
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Preference number: 6 (lower is better) Translates to: SMRIIFHSKYTA*NTTLTPYWRIR Trigger: CCGAATTCTCCAGTATGGAGTCAAGGTTGTATTTCAGGCAGTGTACTTGCTGTGGAAGATGATGCGCATGGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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| CDS GCA 72 bp | AGGGTCCATGCGCATCATCTTCCACAGCAAGTACACTaGCTGAAATACAACCTTGACTCCATACTGGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: RVHAHHLPQQVH*LKYNLDSILEN Trigger: ATTCTCCAGTATGGAGTCAAGGTTGTATTTCAGGCAGTGTACTTGCTGTGGAAGATGATGCGCATGGACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049207.9 ENSMUST00000100196.9 |
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