Pregenerated sensors for ALDOC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017390Ensembl transcript IDs: ENSMUST00000017534.15, ENSMUST00000102478.4
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGATGGAGGAGAACTGGCCCACTCTGATCCCTGCTTGTCCCCTTTaGGCCTTGCACAAAATGGAGTTTCTCATCCTGCTGGATCCTTTA | + |
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Preference number: 1 (lower is better) Translates to: EMEENWPTLIPACPL*ALHKMEFLILLDPL Trigger: TAAAGGATCCAGCAGGATGAGAAACTCCATTTTGTGCAAGGCTCAAAGGGGACAAGCAGGGATCAGAGTGGGCCAGTTCTCCTCCATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| 3UTR GCA 90 bp | GTAGCCCCGAGGCTTGGAAGGTTTCCTTATTGGAAAAGACCTAAGTaGACATTCTTCAGAGATGGAGGAGAACTGGCCCACTCTGATCCC | + |
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Preference number: 1 (lower is better) Translates to: VAPRLGRFPYWKRPK*TFFRDGGELAHSDP Trigger: GGGATCAGAGTGGGCCAGTTCTCCTCCATCTCTGAAGAATGTGCACTTAGGTCTTTTCCAATAAGGAAACCTTCCAAGCCTCGGGGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| 3UTR CCA 90 bp | GGGTACAGCAATGTAAGGCATGTGAGATGTGAGATGACTTGGCGCTaGATAAAGATATCTCTGTTCTGCATAGCTATTTGGCCCTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: GYSNVRHVRCEMTWR*IKISLFCIAIWPWL Trigger: CAGCCAGGGCCAAATAGCTATGCAGAACAGAGATATCTTTATCCAGCGCCAAGTCATCTCACATCTCACATGCCTTACATTGCTGTACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| 3UTR CCA 90 bp | GGTCTCGGGTACAGCAATGTAAGGCATGTGAGATGTGAGATGACTTaGCGCTGGATAAAGATATCTCTGTTCTGCATAGCTATTTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: GLGYSNVRHVRCEMT*RWIKISLFCIAIWP Trigger: GGGCCAAATAGCTATGCAGAACAGAGATATCTTTATCCAGCGCCAAGTCATCTCACATCTCACATGCCTTACATTGCTGTACCCGAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| 3UTR TCA 90 bp | GTAATGCCTGCTGTTCGAATCCTAAATAGCCTCTCAGCCTCTCTTTaGAGCCTGTTTCCTCCTATGAAAAGTACAATGGTACCTACTTTA | + |
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Preference number: 1 (lower is better) Translates to: VMPAVRILNSLSASL*SLFPPMKSTMVPTL Trigger: TAAAGTAGGTACCATTGTACTTTTCATAGGAGGAAACAGGCTTCAAAGAGAGGCTGAGAGGCTATTTAGGATTCGAACAGCAGGCATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| 3UTR-3UTR CCA 90 bp | TCCGATGAATCCCTTCTCTACATGGAAGTGGGTCATAGCCCTTGGCAAGCTTCTGAGATGGAGGAGAACTaGCCCACTCTGATCCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SDESLLYMEVGHSPWQASEMEEN*PTLIPA Trigger: AGCAGGGATCAGAGTGGGCCAGTTCTCCTCCATCTC...AGAAGCTTGCCAAGGGCTATGACCCACTTCCATGTAGAGAAGGGATTCATCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| 3UTR-3UTR CCA 90 bp | GTGGAGACAGGAAAAAGGTCCACATGTTCTGTTCTGACTTCTAGAAAGTCCCCCTACCCTCCCATCCTGTaGTCTCGGGTACAGCAATGT | + |
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Preference number: 2 (lower is better) Translates to: VETGKRSTCSVLTSRKSPYPPIL*SRVQQC Trigger: ACATTGCTGTACCCGAGACCACAGGATGGGAGGGTA...GGGGGACTTTCTAGAAGTCAGAACAGAACATGTGGACCTTTTTCCTGTCTCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| 3UTR-3UTR CCA 90 bp | CTCATTTATTTGCTATGTACTCAGAGCATAAGGAGCACGAGTCAGGGCTGGAGTTACCCTCCCATCCTGTaGTCTCGGGTACAGCAATGT | + |
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Preference number: 2 (lower is better) Translates to: LIYLLCTQSIRSTSQGWSYPPIL*SRVQQC Trigger: ACATTGCTGTACCCGAGACCACAGGATGGGAGGGTA...ACTCCAGCCCTGACTCGTGCTCCTTATGCTCTGAGTACATAGCAAATAAATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| 3UTR-3UTR CCA 90 bp | CTCATTTATTTGCTATGTACTCAGAGCATAAGGAGCACGAGTCAGGGCTGGAGTCCCCATCTTCAAACATaGGAGGGCATCTCTACCCTC | + |
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Preference number: 2 (lower is better) Translates to: LIYLLCTQSIRSTSQGWSPHLQT*EGISTL Trigger: GAGGGTAGAGATGCCCTCCCATGTTTGAAGATGGGG...ACTCCAGCCCTGACTCGTGCTCCTTATGCTCTGAGTACATAGCAAATAAATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| 3UTR-3UTR CCA 90 bp | CAAGGACAAACTATACCATCAAGGGTAACTGTAAGGGCTGGTGGAGACAGGAAACCCCATCTTCAAACATaGGAGGGCATCTCTACCCTC | + |
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Preference number: 2 (lower is better) Translates to: QGQTIPSRVTVRAGGDRKPHLQT*EGISTL Trigger: GAGGGTAGAGATGCCCTCCCATGTTTGAAGATGGGG...TTTCCTGTCTCCACCAGCCCTTACAGTTACCCTTGATGGTATAGTTTGTCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| 3UTR-3UTR GCA 90 bp | CAAGGACAAACTATACCATCAAGGGTAACTGTAAGGGCTGGTGGAGACAGGAAAAGGCAAAATGGGATGTaGATTGCTAGGCCAAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: QGQTIPSRVTVRAGGDRKRQNGM*IARPRA Trigger: AGCCCTTGGCCTAGCAATGCACATCCCATTTTGCCT...TTTCCTGTCTCCACCAGCCCTTACAGTTACCCTTGATGGTATAGTTTGTCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| 3UTR-3UTR TCA 90 bp | AGGGTTAAAGTGATCCTGTCCCTAATGTCTGATACCTCAGCCTCCCAACTAGCCGCCTGTTTCCTCCTATaGAAAGTACAATGGTACCTA | + |
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Preference number: 2 (lower is better) Translates to: RVKVILSLMSDTSASQLAACFLL*KVQWYL Trigger: TAGGTACCATTGTACTTTTCATAGGAGGAAACAGGC...GGCTAGTTGGGAGGCTGAGGTATCAGACATTAGGGACAGGATCACTTTAACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| 3UTR CAA 90 bp | GATGACTTGGCGCTGGATAAAGATATCTCTGTTCTGCATAGCTATTaGGCCCTGGCTGTGACTATAGGCAAAATGGGATGTGCATTGCTA | + |
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Preference number: 2 (lower is better) Translates to: DDLALDKDISVLHSY*ALAVTIGKMGCALL Trigger: TAGCAATGCACATCCCATTTTGCCTATAGTCACAGCCAGGGCCAAATAGCTATGCAGAACAGAGATATCTTTATCCAGCGCCAAGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| 3UTR-3UTR CCA 90 bp | GTGGAGACAGGAAAAAGGTCCACATGTTCTGTTCTGACTTCTAGAAAGTCCCCCGAGATGACTTGGCGCTaGATAAAGATATCTCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: VETGKRSTCSVLTSRKSPEMTWR*IKISLF Trigger: GAACAGAGATATCTTTATCCAGCGCCAAGTCATCTC...GGGGGACTTTCTAGAAGTCAGAACAGAACATGTGGACCTTTTTCCTGTCTCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| 3UTR-3UTR CCA 90 bp | AGAACATCAATGACTTTTCCAGTGCACATCTGTCTAGTGTCACCCTACCTCACAAACTGTAAGGGCTGGTaGAGACAGGAAAAAGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: RTSMTFPVHICLVSPYLTNCKGW*RQEKGP Trigger: TGGACCTTTTTCCTGTCTCCACCAGCCCTTACAGTT...TGTGAGGTAGGGTGACACTAGACAGATGTGCACTGGAAAAGTCATTGATGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| 3UTR-3UTR GCA 90 bp | CTCATTTATTTGCTATGTACTCAGAGCATAAGGAGCACGAGTCAGGGCTGGAGTAAGATATCTCTGTTCTaGATAGCTATTTGGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LIYLLCTQSIRSTSQGWSKISLF*IAIWPW Trigger: CCAGGGCCAAATAGCTATGCAGAACAGAGATATCTT...ACTCCAGCCCTGACTCGTGCTCCTTATGCTCTGAGTACATAGCAAATAAATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| 3UTR-3UTR CCA 90 bp | AGGCTTGGAAGGTTTCCTTATTGGAAAAGACCTAAGTGCACATTCTTCAGAGATCATGGAGGTAGACTTTaGTATGTGCAACAGACAGAC | + |
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Preference number: 2 (lower is better) Translates to: RLGRFPYWKRPKCTFFRDHGGRL*YVQQTD Trigger: GTCTGTCTGTTGCACATACCAAAGTCTACCTCCATG...ATCTCTGAAGAATGTGCACTTAGGTCTTTTCCAATAAGGAAACCTTCCAAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| 3UTR TCA 72 bp | AACAACTCCAGCTTTGGAAATCAGCAGGTAGGAGCCTaGGCTAGGGATGGTGAGCCAGGTGAACCCTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: NNSSFGNQQVGA*ARDGEPGEPFL Trigger: GAGGAAGGGTTCACCTGGCTCACCATCCCTAGCTCAGGCTCCTACCTGCTGATTTCCAAAGCTGGAGTTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| 3UTR CCA 72 bp | TCAAACATGGGAGGGCATCTCTACCCTCCCATCCTGTaGTCTCGGGTACAGCAATGTAAGGCATGTGAGATG | + |
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Preference number: 3 (lower is better) Translates to: SNMGGHLYPPIL*SRVQQCKACEM Trigger: CATCTCACATGCCTTACATTGCTGTACCCGAGACCACAGGATGGGAGGGTAGAGATGCCCTCCCATGTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| 3UTR CCA 72 bp | GGATCAGCAAGAGGTCGCACACATGGAGGTAGACTTTaGTATGTGCAACAGACAGACAGACAGAGCGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: GSARGRTHGGRL*YVQQTDRQSGV Trigger: CACACCGCTCTGTCTGTCTGTCTGTTGCACATACCAAAGTCTACCTCCATGTGTGCGACCTCTTGCTGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| 3UTR TCA 72 bp | CACATTCTTCAGAGATGGAGGAGAACTGGCCCACTCTaGTCCCTGCTTGTCCCCTTTGAGCCTTGCACAAAA | + |
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Preference number: 3 (lower is better) Translates to: HILQRWRRTGPL*SLLVPFEPCTK Trigger: TTTTGTGCAAGGCTCAAAGGGGACAAGCAGGGATCAGAGTGGGCCAGTTCTCCTCCATCTCTGAAGAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| 3UTR GCA 72 bp | CAAGAGGTCGCACACATGGAGGTAGACTTTGGTATGTaGAACAGACAGACAGACAGAGCGGTGTGCTGTGTT | + |
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Preference number: 3 (lower is better) Translates to: QEVAHMEVDFGM*NRQTDRAVCCV Trigger: AACACAGCACACCGCTCTGTCTGTCTGTCTGTTGCACATACCAAAGTCTACCTCCATGTGTGCGACCTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| 3UTR GCA 72 bp | TTCAGAGATGGAGGAGAACTGGCCCACTCTGATCCCTaGTTGTCCCCTTTGAGCCTTGCACAAAATGGAGTT | + |
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Preference number: 3 (lower is better) Translates to: FRDGGELAHSDP*LSPLSLAQNGV Trigger: AACTCCATTTTGTGCAAGGCTCAAAGGGGACAAGCAGGGATCAGAGTGGGCCAGTTCTCCTCCATCTCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| 3UTR CCA 72 bp | CAAGTCCAGAACCCTCCGATGAATCCCTTCTCTACATaGAAGTGGGTCATAGCCCTTGGCAAGCTTCTAGAC | + |
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Preference number: 3 (lower is better) Translates to: QVQNPPMNPFST*KWVIALGKLLD Trigger: GTCTAGAAGCTTGCCAAGGGCTATGACCCACTTCCATGTAGAGAAGGGATTCATCGGAGGGTTCTGGACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| 3UTR-3UTR CAA 90 bp | CAGAAGCATATGGAAATTGCTGAGTTAGCTGCTTTGATTATAAGGTCAGGCCACCACTCTGATCCCTGCTaGTCCCCTTTGAGCCTTGCA | + |
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Preference number: 3 (lower is better) Translates to: QKHMEIAELAALIIRSGHHSDPC*SPLSLA Trigger: TGCAAGGCTCAAAGGGGACAAGCAGGGATCAGAGTG...GTGGCCTGACCTTATAATCAAAGCAGCTAACTCAGCAATTTCCATATGCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| 3UTR-3UTR CAA 90 bp | CAAGGACAAACTATACCATCAAGGGTAACTGTAAGGGCTGGTGGAGACAGGAAAGTTCTGCATAGCTATTaGGCCCTGGCTGTGACTATA | + |
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Preference number: 3 (lower is better) Translates to: QGQTIPSRVTVRAGGDRKVLHSY*ALAVTI Trigger: TATAGTCACAGCCAGGGCCAAATAGCTATGCAGAAC...TTTCCTGTCTCCACCAGCCCTTACAGTTACCCTTGATGGTATAGTTTGTCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| 3UTR-3UTR CAA 90 bp | GCCCCGAGGCTTGGAAGGTTTCCTTATTGGAAAAGACCTAAGTGCACATTCTTCCTTCCTCCACAAAACTaGAAGCTCAGGAAAACTCAG | + |
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Preference number: 3 (lower is better) Translates to: APRLGRFPYWKRPKCTFFLPPQN*KLRKTQ Trigger: CTGAGTTTTCCTGAGCTTCAAGTTTTGTGGAGGAAG...GAAGAATGTGCACTTAGGTCTTTTCCAATAAGGAAACCTTCCAAGCCTCGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| 3UTR GCA 72 bp | AGGCTTGGAAGGTTTCCTTATTGGAAAAGACCTAAGTaGACATTCTTCAGAGATGGAGGAGAACTGGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: RLGRFPYWKRPK*TFFRDGGELAH Trigger: GTGGGCCAGTTCTCCTCCATCTCTGAAGAATGTGCACTTAGGTCTTTTCCAATAAGGAAACCTTCCAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| 3UTR TCA 72 bp | TGGTCTCGGGTACAGCAATGTAAGGCATGTGAGATGTaGGATGACTTGGCGCTGGATAAAGATATCTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: WSRVQQCKACEM*DDLALDKDISV Trigger: AACAGAGATATCTTTATCCAGCGCCAAGTCATCTCACATCTCACATGCCTTACATTGCTGTACCCGAGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| 3UTR TCA 72 bp | GAAGAACAGTGCCTGGCAGAAGCATATGGAAATTGCTaGGTTAGCTGCTTTGATTATAAGGTCAGGCCACAC | + |
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Preference number: 3 (lower is better) Translates to: EEQCLAEAYGNC*VSCFDYKVRPH Trigger: GTGTGGCCTGACCTTATAATCAAAGCAGCTAACTCAGCAATTTCCATATGCTTCTGCCAGGCACTGTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| 3UTR GCA 72 bp | GCAACAGACAGACAGACAGAGCGGTGTGCTGTGTTTTaGTCTCATTTATTTGCTATGTACTCAGAGCATAAG | + |
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Preference number: 3 (lower is better) Translates to: ATDRQTERCAVF*SHLFAMYSEHK Trigger: CTTATGCTCTGAGTACATAGCAAATAAATGAGAGCAAAACACAGCACACCGCTCTGTCTGTCTGTCTGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| 3UTR CCA 72 bp | TACAGCAATGTAAGGCATGTGAGATGTGAGATGACTTaGCGCTGGATAAAGATATCTCTGTTCTGCATAGCT | + |
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Preference number: 3 (lower is better) Translates to: YSNVRHVRCEMT*RWIKISLFCIA Trigger: AGCTATGCAGAACAGAGATATCTTTATCCAGCGCCAAGTCATCTCACATCTCACATGCCTTACATTGCTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| 3UTR TCA 72 bp | AATCGATTCCAATTCGAGCGATTGAGGATGCTTCATTaGAAAATTCCTGAGCACAGCCTCTATATAGTAATG | + |
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Preference number: 3 (lower is better) Translates to: NRFQFERLRMLH*KIPEHSLYIVM Trigger: CATTACTATATAGAGGCTGTGCTCAGGAATTTTTCAATGAAGCATCCTCAATCGCTCGAATTGGAATCGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| CDS-3UTR CCA 90 bp | GGCTGTGACTATAGGCAAAATGGGATGTGCATTGCTAGGCCAAGGGCTGTGGGTCCAGCCCTTGAGTGGTaGTTTCCCCGTCGGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GCDYRQNGMCIARPRAVGPALEW*FPRRSQ Trigger: CTGGGACCGACGGGGAAACCACCACTCAAGGGCTGG...ACCCACAGCCCTTGGCCTAGCAATGCACATCCCATTTTGCCTATAGTCACAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| CDS-3UTR GCA 90 bp | GGCCCTGGCTGTGACTATAGGCAAAATGGGATGTGCATTGCTAGGCCAAGGGCTCTCCGCCATCTCCACTaGCTTCATATCTGCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GPGCDYRQNGMCIARPRALRHLH*LHICPG Trigger: CCCAGGGCAGATATGAAGGCAGTGGAGATGGCGGAG...AGCCCTTGGCCTAGCAATGCACATCCCATTTTGCCTATAGTCACAGCCAGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| 3UTR CAA 72 bp | GCCCTGGCTGTGACTATAGGCAAAATGGGATGTGCATaGCTAGGCCAAGGGCTGTGGGTAGAGTCAGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: ALAVTIGKMGCA*LGQGLWVESAC Trigger: GCACGCTGACTCTACCCACAGCCCTTGGCCTAGCAATGCACATCCCATTTTGCCTATAGTCACAGCCAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| CDS-3UTR TCA 90 bp | GGGCATCTCTACCCTCCCATCCTGTGGTCTCGGGTACAGCAATGTAAGGCATGTCACGGTCATCAGCACTaGATAGGACCTGGCGGTACA | + |
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Preference number: 4 (lower is better) Translates to: GHLYPPILWSRVQQCKACHGHQH*IGPGGT Trigger: TGTACCGCCAGGTCCTATTCAGTGCTGATGACCGTG...ACATGCCTTACATTGCTGTACCCGAGACCACAGGATGGGAGGGTAGAGATGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| CDS-3UTR TCA 90 bp | AACCCTTCCTCCACAAAACTTGAAGCTCAGGAAAACTCAGATCTCACCTCACCAGCCCATAGGAGAAGGTaGGGGCCCAGGGCCGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: NPSSTKLEAQENSDLTSPAHRRR*GPRAGE Trigger: TTCCCCGGCCCTGGGCCCTCACCTTCTCCTATGGGC...TGGTGAGGTGAGATCTGAGTTTTCCTGAGCTTCAAGTTTTGTGGAGGAAGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
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| CDS-3UTR CCA 90 bp | GCGCTGGATAAAGATATCTCTGTTCTGCATAGCTATTTGGCCCTGGCTGTGACTCACCCCTGGGACAGCTaGGGGCACAGTACGACGCAG | + |
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Preference number: 4 (lower is better) Translates to: ALDKDISVLHSYLALAVTHPWDS*GHSTTQ Trigger: CTGCGTCGTACTGTGCCCCCAGCTGTCCCAGGGGTG...AGTCACAGCCAGGGCCAAATAGCTATGCAGAACAGAGATATCTTTATCCAGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| CDS-3UTR TCA 90 bp | GGGTACAGCAATGTAAGGCATGTGAGATGTGAGATGACTTGGCGCTGGATAAAGAGCCCATCCAGCCCTTaGGTGGTGGTTTCCCCGTCG | + |
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Preference number: 4 (lower is better) Translates to: GYSNVRHVRCEMTWRWIKSPSSP*VVVSPS Trigger: CGACGGGGAAACCACCACTCAAGGGCTGGATGGGCT...CTTTATCCAGCGCCAAGTCATCTCACATCTCACATGCCTTACATTGCTGTACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| CDS-3UTR TCA 90 bp | GTAAGGCATGTGAGATGTGAGATGACTTGGCGCTGGATAAAGATATCTCTGTTCGCCCATAGGAGAAGGTaGGGGCCCAGGGCCGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: VRHVRCEMTWRWIKISLFAHRRR*GPRAGE Trigger: TTCCCCGGCCCTGGGCCCTCACCTTCTCCTATGGGC...GAACAGAGATATCTTTATCCAGCGCCAAGTCATCTCACATCTCACATGCCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTTCACGTCCCCCTGATCCCAAGAGAGAAAATTAGCAAGCAGAGCCCACAGGGCAGTGACAGTTaGCATGGCGATCTCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: AGVHVPLIPREKISKQSPQGSDS*HGDLFW Trigger: CCAGAAGAGATCGCCATGGCAACTGTCACTGCCCTG...TGGGCTCTGCTTGCTAATTTTCTCTCTTGGGATCAGGGGGACGTGAACTCCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| CDS-3UTR CCA 90 bp | GCTGTGACTATAGGCAAAATGGGATGTGCATTGCTAGGCCAAGGGCTGTGGGTAGCACTGAATAGGACCTaGCGGTACAGCCGGCGATTC | + |
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Preference number: 4 (lower is better) Translates to: AVTIGKMGCALLGQGLWVALNRT*RYSRRF Trigger: GAATCGCCGGCTGTACCGCCAGGTCCTATTCAGTGC...TACCCACAGCCCTTGGCCTAGCAATGCACATCCCATTTTGCCTATAGTCACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| CDS-3UTR CCA 90 bp | GCTGGAGTTCACGTCCCCCTGATCCCAAGAGAGAAAATTAGCAAGCAGAGCCCAAGAATGCCCTTATCCTaGATGGTGCGGACGAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: AGVHVPLIPREKISKQSPRMPLS*MVRTKG Trigger: CCCCTTCGTCCGCACCATCCAGGATAAGGGCATTCT...TGGGCTCTGCTTGCTAATTTTCTCTCTTGGGATCAGGGGGACGTGAACTCCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| CDS-3UTR CCA 90 bp | GTGGAGACAGGAAAAAGGTCCACATGTTCTGTTCTGACTTCTAGAAAGTCCCCCCCAGGGCCGGGGAAGTaGGCAGCGGTTGATGGCATT | + |
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Preference number: 4 (lower is better) Translates to: VETGKRSTCSVLTSRKSPPGPGK*AAVDGI Trigger: AATGCCATCAACCGCTGCCCACTTCCCCGGCCCTGG...GGGGGACTTTCTAGAAGTCAGAACAGAACATGTGGACCTTTTTCCTGTCTCCAC 54% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| CDS-3UTR GCA 90 bp | AGGGTTAAAGTGATCCTGTCCCTAATGTCTGATACCTCAGCCTCCCAACTAGCCTCTCCAGGCATTGAGTaGAGATGCCTGCAGGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: RVKVILSLMSDTSASQLASPGIE*RCLQGT Trigger: CGTGCCCTGCAGGCATCTGCACTCAATGCCTGGAGA...GGCTAGTTGGGAGGCTGAGGTATCAGACATTAGGGACAGGATCACTTTAACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
||
| CDS-3UTR CCA 90 bp | CAAACTATACCATCAAGGGTAACTGTAAGGGCTGGTGGAGACAGGAAAAAGGTCCCAGCCCTTGAGTGGTaGTTTCCCCGTCGGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QTIPSRVTVRAGGDRKKVPALEW*FPRRSQ Trigger: CTGGGACCGACGGGGAAACCACCACTCAAGGGCTGG...GACCTTTTTCCTGTCTCCACCAGCCCTTACAGTTACCCTTGATGGTATAGTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CCA 90 bp | GATAAAGATATCTCTGTTCTGCATAGCTATTTGGCCCTGGCTGTGACTATAGGCCACCCCTGGGACAGCTaGGGGCACAGTACGACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DKDISVLHSYLALAVTIGHPWDS*GHSTTQ Trigger: CTGCGTCGTACTGTGCCCCCAGCTGTCCCAGGGGTG...GCCTATAGTCACAGCCAGGGCCAAATAGCTATGCAGAACAGAGATATCTTTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CCA 90 bp | GTGGAGACAGGAAAAAGGTCCACATGTTCTGTTCTGACTTCTAGAAAGTCCCCCCAGGAAAGTCACCCCTaGGACAGCTGGGGGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VETGKRSTCSVLTSRKSPQESHP*DSWGHS Trigger: ACTGTGCCCCCAGCTGTCCCAGGGGTGACTTTCCTG...GGGGGACTTTCTAGAAGTCAGAACAGAACATGTGGACCTTTTTCCTGTCTCCAC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| 3UTR CAA 72 bp | GGAGAACTGGCCCACTCTGATCCCTGCTTGTCCCCTTaGAGCCTTGCACAAAATGGAGTTTCTCATCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GELAHSDPCLSP*SLAQNGVSHPA Trigger: AGCAGGATGAGAAACTCCATTTTGTGCAAGGCTCAAAGGGGACAAGCAGGGATCAGAGTGGGCCAGTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
||
| CDS-3UTR TCA 90 bp | GGGCTGGTGGAGACAGGAAAAAGGTCCACATGTTCTGTTCTGACTTCTAGAAAGTACGACGCAGGGCAGTaGCAGTTGCCATGGCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: GLVETGKRSTCSVLTSRKYDAGQ*QLPWRS Trigger: AGATCGCCATGGCAACTGTCACTGCCCTGCGTCGTA...CTTTCTAGAAGTCAGAACAGAACATGTGGACCTTTTTCCTGTCTCCACCAGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR GCA 90 bp | GGGTACAGCAATGTAAGGCATGTGAGATGTGAGATGACTTGGCGCTGGATAAAGGGCATTGAGTGCAGATaGCTGCAGGGCACGCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: GYSNVRHVRCEMTWRWIKGIECR*LQGTPI Trigger: TATGGGCGTGCCCTGCAGGCATCTGCACTCAATGCC...CTTTATCCAGCGCCAAGTCATCTCACATCTCACATGCCTTACATTGCTGTACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR GCA 90 bp | ACTGTAAGGGCTGGTGGAGACAGGAAAAAGGTCCACATGTTCTGTTCTGACTTCTCTCCAGGCATTGAGTaGAGATGCCTGCAGGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: TVRAGGDRKKVHMFCSDFSPGIE*RCLQGT Trigger: CGTGCCCTGCAGGCATCTGCACTCAATGCCTGGAGA...GAAGTCAGAACAGAACATGTGGACCTTTTTCCTGTCTCCACCAGCCCTTACAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR GCA 90 bp | GTGGAGACAGGAAAAAGGTCCACATGTTCTGTTCTGACTTCTAGAAAGTCCCCCCACTGCCTTCATATCTaGCCTGGGCTGCAAGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VETGKRSTCSVLTSRKSPHCLHI*PGLQAR Trigger: ACGGGCTTGCAGCCCAGGGCAGATATGAAGGCAGTG...GGGGGACTTTCTAGAAGTCAGAACAGAACATGTGGACCTTTTTCCTGTCTCCAC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CCA 90 bp | GCTGTGACTATAGGCAAAATGGGATGTGCATTGCTAGGCCAAGGGCTGTGGGTATTTGGCTCAGCCTTTTaGCCATGCTGCCTACGGACT | + |
|
Preference number: 4 (lower is better) Translates to: AVTIGKMGCALLGQGLWVFGSAF*PCCLRT Trigger: AGTCCGTAGGCAGCATGGCCAAAAGGCTGAGCCAAA...TACCCACAGCCCTTGGCCTAGCAATGCACATCCCATTTTGCCTATAGTCACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CCA 90 bp | GCTGGAGTTCACGTCCCCCTGATCCCAAGAGAGAAAATTAGCAAGCAGAGCCCATTCTCCACCCCAATTTaGCTCAGCCTTTTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: AGVHVPLIPREKISKQSPFSTPI*LSLLAM Trigger: CATGGCCAAAAGGCTGAGCCAAATTGGGGTGGAGAA...TGGGCTCTGCTTGCTAATTTTCTCTCTTGGGATCAGGGGGACGTGAACTCCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CCA 90 bp | GGGTACAGCAATGTAAGGCATGTGAGATGTGAGATGACTTGGCGCTGGATAAAGTGCCCTTATCCTGGATaGTGCGGACGAAGGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: GYSNVRHVRCEMTWRWIKCPYPG*CGRRGH Trigger: GTGTCCCCTTCGTCCGCACCATCCAGGATAAGGGCA...CTTTATCCAGCGCCAAGTCATCTCACATCTCACATGCCTTACATTGCTGTACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CCA 90 bp | GTAACTGTAAGGGCTGGTGGAGACAGGAAAAAGGTCCACATGTTCTGTTCTGACTGCCCTTATCCTGGATaGTGCGGACGAAGGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: VTVRAGGDRKKVHMFCSDCPYPG*CGRRGH Trigger: GTGTCCCCTTCGTCCGCACCATCCAGGATAAGGGCA...GTCAGAACAGAACATGTGGACCTTTTTCCTGTCTCCACCAGCCCTTACAGTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CCA 90 bp | GTTAAAGTGATCCTGTCCCTAATGTCTGATACCTCAGCCTCCCAACTAGCCGAGAGAATGCCCTTATCCTaGATGGTGCGGACGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VKVILSLMSDTSASQLAERMPLS*MVRTKG Trigger: CCCCTTCGTCCGCACCATCCAGGATAAGGGCATTCT...CTCGGCTAGTTGGGAGGCTGAGGTATCAGACATTAGGGACAGGATCACTTTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
||
| CDS-3UTR CCA 90 bp | TTTGCTCTCATTTATTTGCTATGTACTCAGAGCATAAGGAGCACGAGTCAGGGCCCAGGGCCGGGGAAGTaGGCAGCGGTTGATGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: FALIYLLCTQSIRSTSQGPGPGK*AAVDGI Trigger: AATGCCATCAACCGCTGCCCACTTCCCCGGCCCTGG...GCCCTGACTCGTGCTCCTTATGCTCTGAGTACATAGCAAATAAATGAGAGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CCA 90 bp | AGGGTTAAAGTGATCCTGTCCCTAATGTCTGATACCTCAGCCTCCCAACTAGCCCCTTCATATCTGCCCTaGGCTGCAAGCCCGTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RVKVILSLMSDTSASQLAPSYLP*AASPFI Trigger: GATGAACGGGCTTGCAGCCCAGGGCAGATATGAAGG...GGCTAGTTGGGAGGCTGAGGTATCAGACATTAGGGACAGGATCACTTTAACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
||
| CDS-3UTR TCA 90 bp | GGGTACAGCAATGTAAGGCATGTGAGATGTGAGATGACTTGGCGCTGGATAAAGCACGGTCATCAGCACTaGATAGGACCTGGCGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GYSNVRHVRCEMTWRWIKHGHQH*IGPGGT Trigger: TGTACCGCCAGGTCCTATTCAGTGCTGATGACCGTG...CTTTATCCAGCGCCAAGTCATCTCACATCTCACATGCCTTACATTGCTGTACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR TCA 90 bp | GGGTACAGCAATGTAAGGCATGTGAGATGTGAGATGACTTGGCGCTGGATAAAGCTTCTGGGCTATACTTaGTGGGACAGGCATGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GYSNVRHVRCEMTWRWIKLLGYT*WDRHGQ Trigger: CTGGCCATGCCTGTCCCATCAAGTATAGCCCAGAAG...CTTTATCCAGCGCCAAGTCATCTCACATCTCACATGCCTTACATTGCTGTACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR TCA 90 bp | CAAGGACAAACTATACCATCAAGGGTAACTGTAAGGGCTGGTGGAGACAGGAAATACGACGCAGGGCAGTaGCAGTTGCCATGGCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QGQTIPSRVTVRAGGDRKYDAGQ*QLPWRS Trigger: AGATCGCCATGGCAACTGTCACTGCCCTGCGTCGTA...TTTCCTGTCTCCACCAGCCCTTACAGTTACCCTTGATGGTATAGTTTGTCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR GCA 90 bp | TTTGCTCTCATTTATTTGCTATGTACTCAGAGCATAAGGAGCACGAGTCAGGGCCATCTGCAGCCAGAATaGCCTTGCCGGGGGTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: FALIYLLCTQSIRSTSQGHLQPE*PCRGSR Trigger: TCGTGACCCCCGGCAAGGGCATTCTGGCTGCAGATG...GCCCTGACTCGTGCTCCTTATGCTCTGAGTACATAGCAAATAAATGAGAGCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR GCA 90 bp | GTAAGGCATGTGAGATGTGAGATGACTTGGCGCTGGATAAAGATATCTCTGTTCCATCTGCAGCCAGAATaGCCTTGCCGGGGGTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: VRHVRCEMTWRWIKISLFHLQPE*PCRGSR Trigger: TCGTGACCCCCGGCAAGGGCATTCTGGCTGCAGATG...GAACAGAGATATCTTTATCCAGCGCCAAGTCATCTCACATCTCACATGCCTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR GCA 90 bp | ACTGTAAGGGCTGGTGGAGACAGGAAAAAGGTCCACATGTTCTGTTCTGACTTCGCCTTTTGGCCATGCTaGCTACGGACTCATCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVRAGGDRKKVHMFCSDFAFWPC*LRTHLQ Trigger: CTGCAGATGAGTCCGTAGGCAGCATGGCCAAAAGGC...GAAGTCAGAACAGAACATGTGGACCTTTTTCCTGTCTCCACCAGCCCTTACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CCA 90 bp | GGCAAAATGGGATGTGCATTGCTAGGCCAAGGGCTGTGGGTAGAGTCAGCGTGCTTCTCTGTAACATACTaGCAACGTTTGAGGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GKMGCALLGQGLWVESACFSVTY*QRLRSW Trigger: CCATGACCTCAAACGTTGCCAGTATGTTACAGAGAA...GCACGCTGACTCTACCCACAGCCCTTGGCCTAGCAATGCACATCCCATTTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| CDS-3UTR CCA 90 bp | GGCTGTGACTATAGGCAAAATGGGATGTGCATTGCTAGGCCAAGGGCTGTGGGTCATGGCGATCTCTTCTaGGCTATACTTGATGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GCDYRQNGMCIARPRAVGHGDLF*AILDGT Trigger: TGTCCCATCAAGTATAGCCCAGAAGAGATCGCCATG...ACCCACAGCCCTTGGCCTAGCAATGCACATCCCATTTTGCCTATAGTCACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| 3UTR CAA 72 bp | AGAGATGGAGGAGAACTGGCCCACTCTGATCCCTGCTaGTCCCCTTTGAGCCTTGCACAAAATGGAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RDGGELAHSDPC*SPLSLAQNGVS Trigger: AGAAACTCCATTTTGTGCAAGGCTCAAAGGGGACAAGCAGGGATCAGAGTGGGCCAGTTCTCCTCCATCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
||
| CDS-3UTR TCA 90 bp | GTGGAGACAGGAAAAAGGTCCACATGTTCTGTTCTGACTTCTAGAAAGTCCCCCCATACTGGCAACGTTTaGGGTCATGGTCTCCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VETGKRSTCSVLTSRKSPHTGNV*GHGLRQ Trigger: CTGACGGAGACCATGACCTCAAACGTTGCCAGTATG...GGGGGACTTTCTAGAAGTCAGAACAGAACATGTGGACCTTTTTCCTGTCTCCAC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR TCA 90 bp | AACCCTTCCTCCACAAAACTTGAAGCTCAGGAAAACTCAGATCTCACCTCACCACTTCTGGGCTATACTTaGTGGGACAGGCATGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NPSSTKLEAQENSDLTSPLLGYT*WDRHGQ Trigger: CTGGCCATGCCTGTCCCATCAAGTATAGCCCAGAAG...TGGTGAGGTGAGATCTGAGTTTTCCTGAGCTTCAAGTTTTGTGGAGGAAGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
||
| CDS-3UTR GCA 90 bp | CTCATTTATTTGCTATGTACTCAGAGCATAAGGAGCACGAGTCAGGGCTGGAGTCCTTATCCTGGATGGTaGGGACGAAGGGGACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LIYLLCTQSIRSTSQGWSPYPGW*GRRGHH Trigger: ATGGTGTCCCCTTCGTCCGCACCATCCAGGATAAGG...ACTCCAGCCCTGACTCGTGCTCCTTATGCTCTGAGTACATAGCAAATAAATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR GCA 90 bp | CTTATTGGAAAAGACCTAAGTGCACATTCTTCAGAGATGGAGGAGAACTGGCCCCAGGGCAGTGACAGTTaGCATGGCGATCTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIGKDLSAHSSEMEENWPQGSDS*HGDLFW Trigger: CCAGAAGAGATCGCCATGGCAACTGTCACTGCCCTG...GGGCCAGTTCTCCTCCATCTCTGAAGAATGTGCACTTAGGTCTTTTCCAATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
||
| CDS-3UTR GCA 90 bp | AGAACATCAATGACTTTTCCAGTGCACATCTGTCTAGTGTCACCCTACCTCACACACTGCCTTCATATCTaGCCTGGGCTGCAAGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RTSMTFPVHICLVSPYLTHCLHI*PGLQAR Trigger: ACGGGCTTGCAGCCCAGGGCAGATATGAAGGCAGTG...TGTGAGGTAGGGTGACACTAGACAGATGTGCACTGGAAAAGTCATTGATGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
||
| CDS-3UTR GCA 90 bp | ACAAACTATACCATCAAGGGTAACTGTAAGGGCTGGTGGAGACAGGAAAAAGGTCTCCGCCATCTCCACTaGCTTCATATCTGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TNYTIKGNCKGWWRQEKGLRHLH*LHICPG Trigger: CCCAGGGCAGATATGAAGGCAGTGGAGATGGCGGAG...ACCTTTTTCCTGTCTCCACCAGCCCTTACAGTTACCCTTGATGGTATAGTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CCA 90 bp | CTCATTTATTTGCTATGTACTCAGAGCATAAGGAGCACGAGTCAGGGCTGGAGTAGCGGGCCAGCACGTTaGCATTCTCCAATATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LIYLLCTQSIRSTSQGWSSGPAR*HSPIWP Trigger: TGGCCATATTGGAGAATGCCAACGTGCTGGCCCGCT...ACTCCAGCCCTGACTCGTGCTCCTTATGCTCTGAGTACATAGCAAATAAATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CCA 90 bp | CAAGGACAAACTATACCATCAAGGGTAACTGTAAGGGCTGGTGGAGACAGGAAAAGCGGGCCAGCACGTTaGCATTCTCCAATATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGQTIPSRVTVRAGGDRKSGPAR*HSPIWP Trigger: TGGCCATATTGGAGAATGCCAACGTGCTGGCCCGCT...TTTCCTGTCTCCACCAGCCCTTACAGTTACCCTTGATGGTATAGTTTGTCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CCA 90 bp | CTCGGGTACAGCAATGTAAGGCATGTGAGATGTGAGATGACTTGGCGCTGGATACAACGTTTGAGGTCATaGTCTCCGTCAGGCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: LGYSNVRHVRCEMTWRWIQRLRS*SPSGRI Trigger: GATTCTGCCTGACGGAGACCATGACCTCAAACGTTG...TATCCAGCGCCAAGTCATCTCACATCTCACATGCCTTACATTGCTGTACCCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CCA 90 bp | CAGAAGCATATGGAAATTGCTGAGTTAGCTGCTTTGATTATAAGGTCAGGCCACCAGGAAAGTCACCCCTaGGACAGCTGGGGGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: QKHMEIAELAALIIRSGHQESHP*DSWGHS Trigger: ACTGTGCCCCCAGCTGTCCCAGGGGTGACTTTCCTG...GTGGCCTGACCTTATAATCAAAGCAGCTAACTCAGCAATTTCCATATGCTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
||
| CDS-3UTR CCA 90 bp | CTCATTTATTTGCTATGTACTCAGAGCATAAGGAGCACGAGTCAGGGCTGGAGTCCTTCATATCTGCCCTaGGCTGCAAGCCCGTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LIYLLCTQSIRSTSQGWSPSYLP*AASPFI Trigger: GATGAACGGGCTTGCAGCCCAGGGCAGATATGAAGG...ACTCCAGCCCTGACTCGTGCTCCTTATGCTCTGAGTACATAGCAAATAAATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR TCA 90 bp | GCAACAGACAGACAGACAGAGCGGTGTGCTGTGTTTTGCTCTCATTTATTTGCTCATACTGGCAACGTTTaGGGTCATGGTCTCCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ATDRQTERCAVFCSHLFAHTGNV*GHGLRQ Trigger: CTGACGGAGACCATGACCTCAAACGTTGCCAGTATG...AGCAAATAAATGAGAGCAAAACACAGCACACCGCTCTGTCTGTCTGTCTGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
||
| CDS-3UTR CCA 90 bp | CTCATTTATTTGCTATGTACTCAGAGCATAAGGAGCACGAGTCAGGGCTGGAGTTTTGGCTCAGCCTTTTaGCCATGCTGCCTACGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LIYLLCTQSIRSTSQGWSFGSAF*PCCLRT Trigger: AGTCCGTAGGCAGCATGGCCAAAAGGCTGAGCCAAA...ACTCCAGCCCTGACTCGTGCTCCTTATGCTCTGAGTACATAGCAAATAAATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGTGGAGACAGGAAAAAGGTCCACATGTTCTGTTCTGACTTCTAGAAAGTTCTCCACCCCAATTTaGCTCAGCCTTTTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GLVETGKRSTCSVLTSRKFSTPI*LSLLAM Trigger: CATGGCCAAAAGGCTGAGCCAAATTGGGGTGGAGAA...CTTTCTAGAAGTCAGAACAGAACATGTGGACCTTTTTCCTGTCTCCACCAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CCA 90 bp | CAAACTATACCATCAAGGGTAACTGTAAGGGCTGGTGGAGACAGGAAAAAGGTCTTGATGGGACAGGCATaGCCAGGGGTCACCATATTG | + |
|
Preference number: 4 (lower is better) Translates to: QTIPSRVTVRAGGDRKKVLMGQA*PGVTIL Trigger: CAATATGGTGACCCCTGGCCATGCCTGTCCCATCAA...GACCTTTTTCCTGTCTCCACCAGCCCTTACAGTTACCCTTGATGGTATAGTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCATATGGAAATTGCTGAGTTAGCTGCTTTGATTATAAGGTCAGGCCACCCTTATCCTGGATGGTaGGGACGAAGGGGACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QKHMEIAELAALIIRSGHPYPGW*GRRGHH Trigger: ATGGTGTCCCCTTCGTCCGCACCATCCAGGATAAGG...GTGGCCTGACCTTATAATCAAAGCAGCTAACTCAGCAATTTCCATATGCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
||
| CDS-3UTR GCA 90 bp | TGTTTTGCTCTCATTTATTTGCTATGTACTCAGAGCATAAGGAGCACGAGTCAGGGCATTGAGTGCAGATaGCTGCAGGGCACGCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: CFALIYLLCTQSIRSTSQGIECR*LQGTPI Trigger: TATGGGCGTGCCCTGCAGGCATCTGCACTCAATGCC...CTGACTCGTGCTCCTTATGCTCTGAGTACATAGCAAATAAATGAGAGCAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CCA 90 bp | GCAACAGACAGACAGACAGAGCGGTGTGCTGTGTTTTGCTCTCATTTATTTGCTGTACACAGCGCCATTTaGCAAAATCAGCACCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ATDRQTERCAVFCSHLFAVHSAI*QNQHRP Trigger: AGGACGGTGCTGATTTTGCCAAATGGCGCTGTGTAC...AGCAAATAAATGAGAGCAAAACACAGCACACCGCTCTGTCTGTCTGTCTGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
||
| CDS-3UTR CCA 90 bp | CAAACTATACCATCAAGGGTAACTGTAAGGGCTGGTGGAGACAGGAAAAAGGTCGTACACAGCGCCATTTaGCAAAATCAGCACCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTIPSRVTVRAGGDRKKVVHSAI*QNQHRP Trigger: AGGACGGTGCTGATTTTGCCAAATGGCGCTGTGTAC...GACCTTTTTCCTGTCTCCACCAGCCCTTACAGTTACCCTTGATGGTATAGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CCA 90 bp | AGAACATCAATGACTTTTCCAGTGCACATCTGTCTAGTGTCACCCTACCTCACATTGATGGGACAGGCATaGCCAGGGGTCACCATATTG | + |
|
Preference number: 4 (lower is better) Translates to: RTSMTFPVHICLVSPYLTLMGQA*PGVTIL Trigger: CAATATGGTGACCCCTGGCCATGCCTGTCCCATCAA...TGTGAGGTAGGGTGACACTAGACAGATGTGCACTGGAAAAGTCATTGATGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
||
| CDS-3UTR GCA 90 bp | GATAAAGATATCTCTGTTCTGCATAGCTATTTGGCCCTGGCTGTGACTATAGGCGACAACTCCTTCTTCTaGTCAGCAGAAAGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DKDISVLHSYLALAVTIGDNSFF*SAERAG Trigger: CCCAGCTCTTTCTGCTGAGCAGAAGAAGGAGTTGTC...GCCTATAGTCACAGCCAGGGCCAAATAGCTATGCAGAACAGAGATATCTTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR GCA 90 bp | TTTGCTCTCATTTATTTGCTATGTACTCAGAGCATAAGGAGCACGAGTCAGGGCGACAACTCCTTCTTCTaGTCAGCAGAAAGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FALIYLLCTQSIRSTSQGDNSFF*SAERAG Trigger: CCCAGCTCTTTCTGCTGAGCAGAAGAAGGAGTTGTC...GCCCTGACTCGTGCTCCTTATGCTCTGAGTACATAGCAAATAAATGAGAGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| CDS-3UTR CCA 90 bp | GATAAAGATATCTCTGTTCTGCATAGCTATTTGGCCCTGGCTGTGACTATAGGCCAACGTTTGAGGTCATaGTCTCCGTCAGGCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: DKDISVLHSYLALAVTIGQRLRS*SPSGRI Trigger: GATTCTGCCTGACGGAGACCATGACCTCAAACGTTG...GCCTATAGTCACAGCCAGGGCCAAATAGCTATGCAGAACAGAGATATCTTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| CDS-3UTR CCA 90 bp | TGCTCTCATTTATTTGCTATGTACTCAGAGCATAAGGAGCACGAGTCAGGGCTGCATGGCGATCTCTTCTaGGCTATACTTGATGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: CSHLFAMYSEHKEHESGLHGDLF*AILDGT Trigger: TGTCCCATCAAGTATAGCCCAGAAGAGATCGCCATG...CAGCCCTGACTCGTGCTCCTTATGCTCTGAGTACATAGCAAATAAATGAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| 3UTR CAA 72 bp | GCGCTGGATAAAGATATCTCTGTTCTGCATAGCTATTaGGCCCTGGCTGTGACTATAGGCAAAATGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: ALDKDISVLHSY*ALAVTIGKMGC Trigger: ACATCCCATTTTGCCTATAGTCACAGCCAGGGCCAAATAGCTATGCAGAACAGAGATATCTTTATCCAGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| 3UTR CAA 72 bp | AGACAGAGCGGTGTGCTGTGTTTTGCTCTCATTTATTaGCTATGTACTCAGAGCATAAGGAGCACGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQSGVLCFALIY*LCTQSIRSTSQ Trigger: CTGACTCGTGCTCCTTATGCTCTGAGTACATAGCAAATAAATGAGAGCAAAACACAGCACACCGCTCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
||
| CDS-3UTR CCA 90 bp | ACAAACTATACCATCAAGGGTAACTGTAAGGGCTGGTGGAGACAGGAAAAAGGTTTCTCTGTAACATACTaGCAACGTTTGAGGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TNYTIKGNCKGWWRQEKGFSVTY*QRLRSW Trigger: CCATGACCTCAAACGTTGCCAGTATGTTACAGAGAA...ACCTTTTTCCTGTCTCCACCAGCCCTTACAGTTACCCTTGATGGTATAGTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS GCA 90 bp | GGTTGGCGATGTAGAGGGACTGTGCTGCCGCTCCGCCATCTCCACTaGCTTCATATCTGCCCTGGGCTGCAAGCCCGTTCATCTCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GWRCRGTVLPLRHLH*LHICPGLQARSSLP Trigger: GGGCAGAGATGAACGGGCTTGCAGCCCAGGGCAGATATGAAGGCAGTGGAGATGGCGGAGCGGCAGCACAGTCCCTCTACATCGCCAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS GCA 90 bp | CCCTGGGACAGCTGGGGGCACAGTACGACGCAGGGCAGTGACAGTTaGCATGGCGATCTCTTCTGGGCTATACTTGATGGGACAGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: PWDSWGHSTTQGSDS*HGDLFWAILDGTGM Trigger: CATGCCTGTCCCATCAAGTATAGCCCAGAAGAGATCGCCATGGCAACTGTCACTGCCCTGCGTCGTACTGTGCCCCCAGCTGTCCCAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CAA 90 bp | AAGTGGGTCATAGCCCTTGGCAAGCTTCTAGACACTCAGCTCTGTAGCCCCGAGCCAGGGGTCACCATATaGGGCTTGAGCAGAGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KWVIALGKLLDTQLCSPEPGVTI*GLSRVP Trigger: AGGGACTCTGCTCAAGCCCAATATGGTGACCCCTGG...CTCGGGGCTACAGAGCTGAGTGTCTAGAAGCTTGCCAAGGGCTATGACCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
||
| CDS-3UTR CAA 90 bp | GGGTACAGCAATGTAAGGCATGTGAGATGTGAGATGACTTGGCGCTGGATAAAGGCAGCCAGAATGCCCTaGCCGGGGGTCACGATCCGT | + |
|
Preference number: 5 (lower is better) Translates to: GYSNVRHVRCEMTWRWIKAARMP*PGVTIR Trigger: ACGGATCGTGACCCCCGGCAAGGGCATTCTGGCTGC...CTTTATCCAGCGCCAAGTCATCTCACATCTCACATGCCTTACATTGCTGTACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CAA 90 bp | GGCAAAATGGGATGTGCATTGCTAGGCCAAGGGCTGTGGGTAGAGTCAGCGTGCAGTACACAGCGCCATTaGGCAAAATCAGCACCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GKMGCALLGQGLWVESACSTQRH*AKSAPS Trigger: GGACGGTGCTGATTTTGCCAAATGGCGCTGTGTACT...GCACGCTGACTCTACCCACAGCCCTTGGCCTAGCAATGCACATCCCATTTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGACTATAGGCAAAATGGGATGTGCATTGCTAGGCCAAGGGCTGTGGGTTGTCCTCTCCAGGCATaGAGTGCAGATGCCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GCDYRQNGMCIARPRAVGCPLQA*SADACR Trigger: CCTGCAGGCATCTGCACTCAATGCCTGGAGAGGACA...ACCCACAGCCCTTGGCCTAGCAATGCACATCCCATTTTGCCTATAGTCACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CAA 90 bp | CAAGGACAAACTATACCATCAAGGGTAACTGTAAGGGCTGGTGGAGACAGGAAAGCAGCCAGAATGCCCTaGCCGGGGGTCACGATCCGT | + |
|
Preference number: 5 (lower is better) Translates to: QGQTIPSRVTVRAGGDRKAARMP*PGVTIR Trigger: ACGGATCGTGACCCCCGGCAAGGGCATTCTGGCTGC...TTTCCTGTCTCCACCAGCCCTTACAGTTACCCTTGATGGTATAGTTTGTCCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CAA 90 bp | GGTCTCGGGTACAGCAATGTAAGGCATGTGAGATGTGAGATGACTTGGCGCTGGATTTGGCTCAGCCTTTaGGCCATGCTGCCTACGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GLGYSNVRHVRCEMTWRWIWLSL*AMLPTD Trigger: GTCCGTAGGCAGCATGGCCAAAAGGCTGAGCCAAAT...CCAGCGCCAAGTCATCTCACATCTCACATGCCTTACATTGCTGTACCCGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CAA 90 bp | GGCCCTGGCTGTGACTATAGGCAAAATGGGATGTGCATTGCTAGGCCAAGGGCTACACCCTTGTCAACCTaGATGCCTACGAGAATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GPGCDYRQNGMCIARPRATPLST*MPTRMP Trigger: GGGCATTCTCGTAGGCATCAAGGTTGACAAGGGTGT...AGCCCTTGGCCTAGCAATGCACATCCCATTTTGCCTATAGTCACAGCCAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CAA 90 bp | GTGGAGACAGGAAAAAGGTCCACATGTTCTGTTCTGACTTCTAGAAAGTCCCCCGAGCCCATCCAGCCCTaGAGTGGTGGTTTCCCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: VETGKRSTCSVLTSRKSPEPIQP*SGGFPV Trigger: GACGGGGAAACCACCACTCAAGGGCTGGATGGGCTC...GGGGGACTTTCTAGAAGTCAGAACAGAACATGTGGACCTTTTTCCTGTCTCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CAA 90 bp | GACTTGGCGCTGGATAAAGATATCTCTGTTCTGCATAGCTATTTGGCCCTGGCTGAGCCCATCCAGCCCTaGAGTGGTGGTTTCCCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: DLALDKDISVLHSYLALAEPIQP*SGGFPV Trigger: GACGGGGAAACCACCACTCAAGGGCTGGATGGGCTC...AGCCAGGGCCAAATAGCTATGCAGAACAGAGATATCTTTATCCAGCGCCAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| CDS TCA 90 bp | CGTTGGCATTCTCCAATATGGCCAGTGCCGACGGCGTGCGATCACTaGTTTTTAGTACACAGCGCCATTTGGCAAAATCAGCACCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RWHSPIWPVPTACDH*FLVHSAIWQNQHRP Trigger: AGGACGGTGCTGATTTTGCCAAATGGCGCTGTGTACTAAAAATCAGTGATCGCACGCCGTCGGCACTGGCCATATTGGAGAATGCCAACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CAA 90 bp | GCTGTGACTATAGGCAAAATGGGATGTGCATTGCTAGGCCAAGGGCTGTGGGTAAGTACACAGCGCCATTaGGCAAAATCAGCACCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVTIGKMGCALLGQGLWVSTQRH*AKSAPS Trigger: GGACGGTGCTGATTTTGCCAAATGGCGCTGTGTACT...TACCCACAGCCCTTGGCCTAGCAATGCACATCCCATTTTGCCTATAGTCACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CAA 90 bp | GTGGAGACAGGAAAAAGGTCCACATGTTCTGTTCTGACTTCTAGAAAGTCCCCCCCAGGGGTCACCATATaGGGCTTGAGCAGAGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VETGKRSTCSVLTSRKSPPGVTI*GLSRVP Trigger: AGGGACTCTGCTCAAGCCCAATATGGTGACCCCTGG...GGGGGACTTTCTAGAAGTCAGAACAGAACATGTGGACCTTTTTCCTGTCTCCAC 52% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGTGGAGACAGGAAAAAGGTCCACATGTTCTGTTCTGACTTCTAGAAAGTGTCCTCTCCAGGCATaGAGTGCAGATGCCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLVETGKRSTCSVLTSRKCPLQA*SADACR Trigger: CCTGCAGGCATCTGCACTCAATGCCTGGAGAGGACA...CTTTCTAGAAGTCAGAACAGAACATGTGGACCTTTTTCCTGTCTCCACCAGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CAA 90 bp | AAGTGGGTCATAGCCCTTGGCAAGCTTCTAGACACTCAGCTCTGTAGCCCCGAGTTCATCTCTGCCCGCTaGATAAACTCCTCAGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KWVIALGKLLDTQLCSPEFISAR*INSSVA Trigger: TGCTACTGAGGAGTTTATCAAGCGGGCAGAGATGAA...CTCGGGGCTACAGAGCTGAGTGTCTAGAAGCTTGCCAAGGGCTATGACCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
||
| CDS-3UTR CAA 90 bp | ACTGTAAGGGCTGGTGGAGACAGGAAAAAGGTCCACATGTTCTGTTCTGACTTCATTTGGCTCAGCCTTTaGGCCATGCTGCCTACGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TVRAGGDRKKVHMFCSDFIWLSL*AMLPTD Trigger: GTCCGTAGGCAGCATGGCCAAAAGGCTGAGCCAAAT...GAAGTCAGAACAGAACATGTGGACCTTTTTCCTGTCTCCACCAGCCCTTACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| CDS-3UTR CAA 90 bp | ATGGAGGTAGACTTTGGTATGTGCAACAGACAGACAGACAGAGCGGTGTGCTGTGTTCTCCACCCCAATTaGGCTCAGCCTTTTGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: MEVDFGMCNRQTDRAVCCVLHPN*AQPFGH Trigger: ATGGCCAAAAGGCTGAGCCAAATTGGGGTGGAGAAC...ACAGCACACCGCTCTGTCTGTCTGTCTGTTGCACATACCAAAGTCTACCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGTGGAGACAGGAAAAAGGTCCACATGTTCTGTTCTGACTTCTAGAAAGGTCACCATATTGGGCTaGAGCAGAGTCCCTTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLVETGKRSTCSVLTSRKVTILG*SRVPSR Trigger: CCTCGAAGGGACTCTGCTCAAGCCCAATATGGTGAC...CTTTCTAGAAGTCAGAACAGAACATGTGGACCTTTTTCCTGTCTCCACCAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CAA 90 bp | GCGCTGGATAAAGATATCTCTGTTCTGCATAGCTATTTGGCCCTGGCTGTGACTGTCACCATATTGGGCTaGAGCAGAGTCCCTTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALDKDISVLHSYLALAVTVTILG*SRVPSR Trigger: CCTCGAAGGGACTCTGCTCAAGCCCAATATGGTGAC...AGTCACAGCCAGGGCCAAATAGCTATGCAGAACAGAGATATCTTTATCCAGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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| CDS-3UTR CAA 90 bp | GTGGAGACAGGAAAAAGGTCCACATGTTCTGTTCTGACTTCTAGAAAGTCCCCCCCCAGCATTATCCCTTaGTCCTCTCCAGGCATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VETGKRSTCSVLTSRKSPPSIIP*SSPGIE Trigger: CTCAATGCCTGGAGAGGACAAAGGGATAATGCTGGG...GGGGGACTTTCTAGAAGTCAGAACAGAACATGTGGACCTTTTTCCTGTCTCCAC 50% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CAA 90 bp | ACAAACTATACCATCAAGGGTAACTGTAAGGGCTGGTGGAGACAGGAAAAAGGTACACCCTTGTCAACCTaGATGCCTACGAGAATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TNYTIKGNCKGWWRQEKGTPLST*MPTRMP Trigger: GGGCATTCTCGTAGGCATCAAGGTTGACAAGGGTGT...ACCTTTTTCCTGTCTCCACCAGCCCTTACAGTTACCCTTGATGGTATAGTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS-3UTR CAA 90 bp | AGAACATCAATGACTTTTCCAGTGCACATCTGTCTAGTGTCACCCTACCTCACACCCAGCATTATCCCTTaGTCCTCTCCAGGCATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RTSMTFPVHICLVSPYLTPSIIP*SSPGIE Trigger: CTCAATGCCTGGAGAGGACAAAGGGATAATGCTGGG...TGTGAGGTAGGGTGACACTAGACAGATGTGCACTGGAAAAGTCATTGATGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017534.15 |
||
| CDS-3UTR CAA 90 bp | GGGTACAGCAATGTAAGGCATGTGAGATGTGAGATGACTTGGCGCTGGATAAAGTTCATCTCTGCCCGCTaGATAAACTCCTCAGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GYSNVRHVRCEMTWRWIKFISAR*INSSVA Trigger: TGCTACTGAGGAGTTTATCAAGCGGGCAGAGATGAA...CTTTATCCAGCGCCAAGTCATCTCACATCTCACATGCCTTACATTGCTGTACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS GCA 72 bp | AGCTGGGGGCACAGTACGACGCAGGGCAGTGACAGTTaGCATGGCGATCTCTTCTGGGCTATACTTGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: SWGHSTTQGSDS*HGDLFWAILDG Trigger: CCCATCAAGTATAGCCCAGAAGAGATCGCCATGGCAACTGTCACTGCCCTGCGTCGTACTGTGCCCCCAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS CAA 72 bp | CAGCCGGCGATTCTCCTCAGTGTTCTCCACCCCAATTaGGCTCAGCCTTTTGGCCATGCTGCCTACGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: QPAILLSVLHPN*AQPFGHAAYGL Trigger: GAGTCCGTAGGCAGCATGGCCAAAAGGCTGAGCCAAATTGGGGTGGAGAACACTGAGGAGAATCGCCGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS CCA 72 bp | AGCCGGCGATTCTCCTCAGTGTTCTCCACCCCAATTTaGCTCAGCCTTTTGGCCATGCTGCCTACGGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: SRRFSSVFSTPI*LSLLAMLPTDS Trigger: TGAGTCCGTAGGCAGCATGGCCAAAAGGCTGAGCCAAATTGGGGTGGAGAACACTGAGGAGAATCGCCGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS CCA 72 bp | CACTTTTTCACACGGTCATCAGCACTGAATAGGACCTaGCGGTACAGCCGGCGATTCTCCTCAGTGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HFFTRSSALNRT*RYSRRFSSVFS Trigger: GGAGAACACTGAGGAGAATCGCCGGCTGTACCGCCAGGTCCTATTCAGTGCTGATGACCGTGTGAAAAAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS CAA 72 bp | GATAAACTCCTCAGTAGCAGCCCCAGCATTATCCCTTaGTCCTCTCCAGGCATTGAGTGCAGATGCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: DKLLSSSPSIIP*SSPGIECRCLQ Trigger: CTGCAGGCATCTGCACTCAATGCCTGGAGAGGACAAAGGGATAATGCTGGGGCTGCTACTGAGGAGTTTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS CCA 72 bp | TTGTCAACCTTGATGCCTACGAGAATGCCCTTATCCTaGATGGTGCGGACGAAGGGGACACCATTGTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: LSTLMPTRMPLS*MVRTKGTPLSS Trigger: AGATGACAATGGTGTCCCCTTCGTCCGCACCATCCAGGATAAGGGCATTCTCGTAGGCATCAAGGTTGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
||
| CDS TCA 72 bp | TCTCCAATATGGCCAGTGCCGACGGCGTGCGATCACTaGTTTTTAGTACACAGCGCCATTTGGCAAAATCAG | + |
|
Preference number: 6 (lower is better) Translates to: SPIWPVPTACDH*FLVHSAIWQNQ Trigger: CTGATTTTGCCAAATGGCGCTGTGTACTAAAAATCAGTGATCGCACGCCGTCGGCACTGGCCATATTGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017534.15 ENSMUST00000102478.4 |
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