Pregenerated sensors for ALDOB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028307Ensembl transcript IDs: ENSMUST00000029987.10
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCAAAGACAATGAAATGCAGGATCCCTCAACAAGAGCAGGAAAGTaGAACTGTACCAACGGAAGGTTCATACACGTTTTATTTCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: GKDNEMQDPSTRAGK*NCTNGRFIHVLFLF Trigger: AAAAAGAAATAAAACGTGTATGAACCTTCCGTTGGTACAGTTTCACTTTCCTGCTCTTGTTGAGGGATCCTGCATTTCATTGTCTTTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR TCA 90 bp | GTTGAGAGACTATTGGGTGACATGCTCATTCTTGGGTTTCAAAGCTaGTTTGGCTTTTCTCTTGTGTTTATGATTCACATGTGTTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: VERLLGDMLILGFQS*FGFSLVFMIHMCCV Trigger: AACACAACACATGTGAATCATAAACACAAGAGAAAAGCCAAATCAGCTTTGAAACCCAAGAATGAGCATGTCACCCAATAGTCTCTCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR-3UTR GCA 90 bp | TCAGCTAAAGGGAGCCATCAGCCACTTGACTGTAGTGAGCATCTGGGGCTGAGGGCAAAGACAATGAAATaGAGGATCCCTCAACAAGAG | + |
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Preference number: 2 (lower is better) Translates to: SAKGSHQPLDCSEHLGLRAKTMK*RIPQQE Trigger: CTCTTGTTGAGGGATCCTGCATTTCATTGTCTTTGC...CCTCAGCCCCAGATGCTCACTACAGTCAAGTGGCTGATGGCTCCCTTTAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR-3UTR TCA 90 bp | GTATCTGGTATAGGCAAAGACAATGAAATGCAGGATCCCTCAACAAGAGCAGGAATTTCCAGGGTTGACTaGGCCATTCAGGTCTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: VSGIGKDNEMQDPSTRAGISRVD*AIQVSK Trigger: TTTGGAGACCTGAATGGCTCAGTCAACCCTGGAAAT...TCCTGCTCTTGTTGAGGGATCCTGCATTTCATTGTCTTTGCCTATACCAGATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGTTCTTTTCTTGGATGAATGTTCTGGAACATAGGGAACTGGAAGTGTTGTCTAATTTCCAGGGTTaGCTGAGCCATTCAGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: GLFFSWMNVLEHRELEVLSNFQG*LSHSGL Trigger: GAGACCTGAATGGCTCAGTCAACCCTGGAAATTAGA...CAACACTTCCAGTTCCCTATGTTCCAGAACATTCATCCAAGAAAAGAACAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR-3UTR TCA 90 bp | ACTTTGAGAGGAAAATGTAGTTCTGTGTCACAAAACCTGGATTCCTGGAGAGGATATAGGCAAAGACAATaGAATGCAGGATCCCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: TLRGKCSSVSQNLDSWRGYRQRQ*NAGSLN Trigger: GTTGAGGGATCCTGCATTTCATTGTCTTTGCCTATA...TCCTCTCCAGGAATCCAGGTTTTGTGACACAGAACTACATTTTCCTCTCAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR-3UTR GCA 90 bp | AGGAAAGTGAAACTGTACCAACGGAAGGTTCATACACGTTTTATTTCTTTTTCTCCTCTGCTTCTGAGTTaGTTTTCTCAGTCGTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: RKVKLYQRKVHTRFISFSPLLLS*FSQSWP Trigger: AGGCCACGACTGAGAAAAGCAACTCAGAAGCAGAGG...AGAAAAAGAAATAAAACGTGTATGAACCTTCCGTTGGTACAGTTTCACTTTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR-3UTR GCA 90 bp | GTATCTGGTATAGGCAAAGACAATGAAATGCAGGATCCCTCAACAAGAGCAGGATATTTCTTTTTCTGTTaGTGTGCCTCTTCTATAACC | + |
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Preference number: 2 (lower is better) Translates to: VSGIGKDNEMQDPSTRAGYFFFC*CASSIT Trigger: GGTTATAGAAGAGGCACAGCAACAGAAAAAGAAATA...TCCTGCTCTTGTTGAGGGATCCTGCATTTCATTGTCTTTGCCTATACCAGATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR-3UTR GCA 90 bp | ACTTTGAGAGGAAAATGTAGTTCTGTGTCACAAAACCTGGATTCCTGGAGAGGAGAGATGAGTCTCTGTTaGAGCTTAGTATTCTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: TLRGKCSSVSQNLDSWRGEMSLC*SLVFSN Trigger: ATTTGAGAATACTAAGCTGCAACAGAGACTCATCTC...TCCTCTCCAGGAATCCAGGTTTTGTGACACAGAACTACATTTTCCTCTCAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCTATAACCAACCCCTGGTAACTATGTTTATTAAAATGCCCTTCTCCATCTGCTTTTCTCAGTCGTaGCCTGTTCTTTTCTTGGAT | + |
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Preference number: 2 (lower is better) Translates to: LFYNQPLVTMFIKMPFSICFSQS*PVLFLD Trigger: ATCCAAGAAAAGAACAGGCCACGACTGAGAAAAGCA...GATGGAGAAGGGCATTTTAATAAACATAGTTACCAGGGGTTGGTTATAGAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR CCA 72 bp | CTCCATCCTCTGCTTCTGAGTTGCTTTTCTCAGTCGTaGCCTGTTCTTTTCTTGGATGAATGTTCTGGAACA | + |
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Preference number: 3 (lower is better) Translates to: LHPLLLSCFSQS*PVLFLDECSGT Trigger: TGTTCCAGAACATTCATCCAAGAAAAGAACAGGCCACGACTGAGAAAAGCAACTCAGAAGCAGAGGATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR TCA 72 bp | GACTATTGGGGTTGTATCTGGTATAGGCAAAGACAATaGAATGCAGGATCCCTCAACAAGAGCAGGAAAGTG | + |
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Preference number: 3 (lower is better) Translates to: DYWGCIWYRQRQ*NAGSLNKSRKV Trigger: CACTTTCCTGCTCTTGTTGAGGGATCCTGCATTTCATTGTCTTTGCCTATACCAGATACAACCCCAATAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR-3UTR CAA 90 bp | ACTTTGAGAGGAAAATGTAGTTCTGTGTCACAAAACCTGGATTCCTGGAGAGGATCTACACTCCATAGCTaGGAAGAGATGAGTCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: TLRGKCSSVSQNLDSWRGSTLHS*EEMSLC Trigger: ACAGAGACTCATCTCTTCCAAGCTATGGAGTGTAGA...TCCTCTCCAGGAATCCAGGTTTTGTGACACAGAACTACATTTTCCTCTCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR GCA 72 bp | AGGGAACTGGAAGTGTTGAGAGACTATTGGGTGACATaGTCATTCTTGGGTTTCAAAGCTGATTTGGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: RELEVLRDYWVT*SFLGFKADLAF Trigger: AAAAGCCAAATCAGCTTTGAAACCCAAGAATGAGCATGTCACCCAATAGTCTCTCAACACTTCCAGTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR CCA 72 bp | GGAAAATGTAGTTCTGTGTCACAAAACCTGGATTCCTaGAGAGGAGTATGCCAAGTCAGGTTTATCAACTCA | + |
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Preference number: 3 (lower is better) Translates to: GKCSSVSQNLDS*RGVCQVRFINS Trigger: TGAGTTGATAAACCTGACTTGGCATACTCCTCTCCAGGAATCCAGGTTTTGTGACACAGAACTACATTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR TCA 72 bp | AATGAAATGCAGGATCCCTCAACAAGAGCAGGAAAGTaGAACTGTACCAACGGAAGGTTCATACACGTTTTA | + |
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Preference number: 3 (lower is better) Translates to: NEMQDPSTRAGK*NCTNGRFIHVL Trigger: TAAAACGTGTATGAACCTTCCGTTGGTACAGTTTCACTTTCCTGCTCTTGTTGAGGGATCCTGCATTTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR-3UTR CAA 90 bp | ACTTTGAGAGGAAAATGTAGTTCTGTGTCACAAAACCTGGATTCCTGGAGAGGAGGTTTCAAAGCTGATTaGGCTTTTCTCTTGTGTTTA | + |
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Preference number: 3 (lower is better) Translates to: TLRGKCSSVSQNLDSWRGGFKAD*AFLLCL Trigger: TAAACACAAGAGAAAAGCCAAATCAGCTTTGAAACC...TCCTCTCCAGGAATCCAGGTTTTGTGACACAGAACTACATTTTCCTCTCAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR TCA 72 bp | CTATTGGGTGACATGCTCATTCTTGGGTTTCAAAGCTaGTTTGGCTTTTCTCTTGTGTTTATGATTCACATG | + |
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Preference number: 3 (lower is better) Translates to: LLGDMLILGFQS*FGFSLVFMIHM Trigger: CATGTGAATCATAAACACAAGAGAAAAGCCAAATCAGCTTTGAAACCCAAGAATGAGCATGTCACCCAATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR TCA 72 bp | AGTTCAATCAAATGTTATCTAATTTCCAGGGTTGACTaGGCCATTCAGGTCTCCAAAATATTTAGGAGAACT | + |
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Preference number: 3 (lower is better) Translates to: SSIKCYLISRVD*AIQVSKIFRRT Trigger: AGTTCTCCTAAATATTTTGGAGACCTGAATGGCTCAGTCAACCCTGGAAATTAGATAACATTTGATTGAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR GCA 90 bp | TCAGCTAAAGGGAGCCATCAGCCACTTGACTGTAGTGAGCATCTGGGGCTGAGGTCTTGTTTGCAGCCTTaGCACCCCAGGCAGCCAATG | + |
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Preference number: 4 (lower is better) Translates to: SAKGSHQPLDCSEHLGLRSCLQP*HPRQPM Trigger: CATTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGA...CCTCAGCCCCAGATGCTCACTACAGTCAAGTGGCTGATGGCTCCCTTTAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR TCA 90 bp | TCAGCTAAAGGGAGCCATCAGCCACTTGACTGTAGTGAGCATCTGGGGCTGAGGCTCCTTGGTCCAACTTaGTGCCCACCACAATTCCCT | + |
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Preference number: 4 (lower is better) Translates to: SAKGSHQPLDCSEHLGLRLLGPT*CPPQFP Trigger: AGGGAATTGTGGTGGGCATCAAGTTGGACCAAGGAG...CCTCAGCCCCAGATGCTCACTACAGTCAAGTGGCTGATGGCTCCCTTTAGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR TCA 90 bp | TTTCTCAGTCGTGGCCTGTTCTTTTCTTGGATGAATGTTCTGGAACATAGGGAAGGTGGCAGCAGCACCTaGAGAGCCTGTGTGAACGTA | + |
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Preference number: 4 (lower is better) Translates to: FLSRGLFFSWMNVLEHREGGSST*RACVNV Trigger: TACGTTCACACAGGCTCTTCAGGTGCTGCTGCCACC...TTCCCTATGTTCCAGAACATTCATCCAAGAAAAGAACAGGCCACGACTGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR GCA 90 bp | TTCTATAACCAACCCCTGGTAACTATGTTTATTAAAATGCCCTTCTCCATCCTCACCCCAGGCAGCCAATaGACTGGCCTGGAGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: FYNQPLVTMFIKMPFSILTPGSQ*TGLEGS Trigger: AGAGCCCTCCAGGCCAGTGCATTGGCTGCCTGGGGT...GAGGATGGAGAAGGGCATTTTAATAAACATAGTTACCAGGGGTTGGTTATAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CCA 90 bp | TTTCTCAGTCGTGGCCTGTTCTTTTCTTGGATGAATGTTCTGGAACATAGGGAAGCTGTGAAGAGCGACTaGGTGGCAGCAGCACCTGAA | + |
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Preference number: 4 (lower is better) Translates to: FLSRGLFFSWMNVLEHREAVKSD*VAAAPE Trigger: TTCAGGTGCTGCTGCCACCCAGTCGCTCTTCACAGC...TTCCCTATGTTCCAGAACATTCATCCAAGAAAAGAACAGGCCACGACTGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CCA 90 bp | TTTCCAGGGTTGACTGAGCCATTCAGGTCTCCAAAATATTTAGGAGAACTGGAGTCTGCTGACAGATGCTaGCATAGCGAGCCAGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: FPGLTEPFRSPKYLGELESADRC*HSEPEH Trigger: ATGCTCTGGCTCGCTATGCCAGCATCTGTCAGCAGA...CTCCAGTTCTCCTAAATATTTTGGAGACCTGAATGGCTCAGTCAACCCTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CCA 90 bp | TGCCTCTTCTATAACCAACCCCTGGTAACTATGTTTATTAAAATGCCCTTCTCCAGGCAGCCAATGCACTaGCCTGGAGGGCTCTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: CLFYNQPLVTMFIKMPFSRQPMH*PGGLFH Trigger: ATGGAAGAGCCCTCCAGGCCAGTGCATTGGCTGCCT...GGAGAAGGGCATTTTAATAAACATAGTTACCAGGGGTTGGTTATAGAAGAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR GCA 90 bp | ACTTTGAGAGGAAAATGTAGTTCTGTGTCACAAAACCTGGATTCCTGGAGAGGAAGGAGTTCTCGGAACTaGCTTCGGTTCTCTTCGGTG | + |
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Preference number: 4 (lower is better) Translates to: TLRGKCSSVSQNLDSWRGRSSRN*LRFSSV Trigger: CACCGAAGAGAACCGAAGGCAGTTCCGAGAACTCCT...TCCTCTCCAGGAATCCAGGTTTTGTGACACAGAACTACATTTTCCTCTCAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR GCA 90 bp | ACTTTGAGAGGAAAATGTAGTTCTGTGTCACAAAACCTGGATTCCTGGAGAGGACATTCTGCTGACAGATaGTGGCATAGCGAGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TLRGKCSSVSQNLDSWRGHSADR*WHSEPE Trigger: CTCTGGCTCGCTATGCCAGCATCTGTCAGCAGAATG...TCCTCTCCAGGAATCCAGGTTTTGTGACACAGAACTACATTTTCCTCTCAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR GCA 90 bp | CTCTTCTATAACCAACCCCTGGTAACTATGTTTATTAAAATGCCCTTCTCCATCGGTTGCCTTCTTGTTTaGAGCCTTGCCACCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LFYNQPLVTMFIKMPFSIGCLLV*SLATPG Trigger: GCCTGGGGTGGCAAGGCTGCAAACAAGAAGGCAACC...GATGGAGAAGGGCATTTTAATAAACATAGTTACCAGGGGTTGGTTATAGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CCA 90 bp | ACTTTGAGAGGAAAATGTAGTTCTGTGTCACAAAACCTGGATTCCTGGAGAGGAGCCAATGCACTGGCCTaGAGGGCTCTTCCATATGAA | + |
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Preference number: 4 (lower is better) Translates to: TLRGKCSSVSQNLDSWRGANALA*RALPYE Trigger: TTCATATGGAAGAGCCCTCCAGGCCAGTGCATTGGC...TCCTCTCCAGGAATCCAGGTTTTGTGACACAGAACTACATTTTCCTCTCAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR GCA 90 bp | GGCCTGTTCTTTTCTTGGATGAATGTTCTGGAACATAGGGAACTGGAAGTGTTGTCCCATTGGCAACAATaGGCTGGGCAATTTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: GLFFSWMNVLEHRELEVLSHWQQ*AGQFQR Trigger: TCTCTGAAATTGCCCAGCGCATTGTTGCCAATGGGA...CAACACTTCCAGTTCCCTATGTTCCAGAACATTCATCCAAGAAAAGAACAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR GCA 90 bp | TGCCTCTTCTATAACCAACCCCTGGTAACTATGTTTATTAAAATGCCCTTCTCCCATCTGCAGCCAGGATaGCCTTCCCATTGGCAACAA | + |
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Preference number: 4 (lower is better) Translates to: CLFYNQPLVTMFIKMPFSHLQPG*PSHWQQ Trigger: TTGTTGCCAATGGGAAGGGCATCCTGGCTGCAGATG...GGAGAAGGGCATTTTAATAAACATAGTTACCAGGGGTTGGTTATAGAAGAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR GCA 90 bp | TGCCTCTTCTATAACCAACCCCTGGTAACTATGTTTATTAAAATGCCCTTCTCCTTCCTTGTTTGTTCCTaGAAGCGGGGCACCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: CLFYNQPLVTMFIKMPFSFLVCS*KRGTSL Trigger: CAAGGAGGTGCCCCGCTTGCAGGAACAAACAAGGAA...GGAGAAGGGCATTTTAATAAACATAGTTACCAGGGGTTGGTTATAGAAGAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR GCA 90 bp | GGCCTGTTCTTTTCTTGGATGAATGTTCTGGAACATAGGGAACTGGAAGTGTTGGTGTATACTTCTTCGTaGAGGCATGTCCAGCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: GLFFSWMNVLEHRELEVLVYTSS*RHVQQS Trigger: TGACTGCTGGACATGCCTGCACGAAGAAGTATACAC...CAACACTTCCAGTTCCCTATGTTCCAGAACATTCATCCAAGAAAAGAACAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR GCA 90 bp | TTTCTCAGTCGTGGCCTGTTCTTTTCTTGGATGAATGTTCTGGAACATAGGGAAGTGGCCATAGCCACCTaGTCTGGTGTATACTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: FLSRGLFFSWMNVLEHREVAIAT*SGVYFF Trigger: GAAGAAGTATACACCAGAGCAGGTGGCTATGGCCAC...TTCCCTATGTTCCAGAACATTCATCCAAGAAAAGAACAGGCCACGACTGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CCA 90 bp | ACTTTGAGAGGAAAATGTAGTTCTGTGTCACAAAACCTGGATTCCTGGAGAGGAACTCCGCCGATGCTCTaGCTAATGGAATTGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: TLRGKCSSVSQNLDSWRGTPPML*LMELST Trigger: TGTGGACAATTCCATTAGCCAGAGCATCGGCGGAGT...TCCTCTCCAGGAATCCAGGTTTTGTGACACAGAACTACATTTTCCTCTCAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CCA 90 bp | TTCTATAACCAACCCCTGGTAACTATGTTTATTAAAATGCCCTTCTCCATCCTCGCAGGCGGTTTCCCATaGTACCCACAGATTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: FYNQPLVTMFIKMPFSILAGGFP*YPQIHL Trigger: CAGATGAATCTGTGGGTACCATGGGAAACCGCCTGC...GAGGATGGAGAAGGGCATTTTAATAAACATAGTTACCAGGGGTTGGTTATAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CCA 90 bp | TTCTATAACCAACCCCTGGTAACTATGTTTATTAAAATGCCCTTCTCCATCCTCGTCAGGAAGCACCTCTaGCTCAACAATAGGGACCAG | + |
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Preference number: 4 (lower is better) Translates to: FYNQPLVTMFIKMPFSILVRKHL*LNNRDQ Trigger: CTGGTCCCTATTGTTGAGCCAGAGGTGCTTCCTGAC...GAGGATGGAGAAGGGCATTTTAATAAACATAGTTACCAGGGGTTGGTTATAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CCA 90 bp | ACTTTGAGAGGAAAATGTAGTTCTGTGTCACAAAACCTGGATTCCTGGAGAGGATTCTCAGAAACATACTaGCAGTGCTCCAGGTCATGG | + |
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Preference number: 4 (lower is better) Translates to: TLRGKCSSVSQNLDSWRGFSETY*QCSRSW Trigger: CCATGACCTGGAGCACTGCCAGTATGTTTCTGAGAA...TCCTCTCCAGGAATCCAGGTTTTGTGACACAGAACTACATTTTCCTCTCAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| 3UTR CAA 72 bp | TGGATGAATGTTCTGGAACATAGGGAACTGGAAGTGTaGAGAGACTATTGGGTGACATGCTCATTCTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: WMNVLEHRELEV*RDYWVTCSFLG Trigger: ACCCAAGAATGAGCATGTCACCCAATAGTCTCTCAACACTTCCAGTTCCCTATGTTCCAGAACATTCATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR GCA 90 bp | TTCTATAACCAACCCCTGGTAACTATGTTTATTAAAATGCCCTTCTCCATCCTCGATACCAGGAACAGCTaGAGGAACAGTTCTGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: FYNQPLVTMFIKMPFSILDTRNS*RNSSVE Trigger: CTCCACAGAACTGTTCCTGCAGCTGTTCCTGGTATC...GAGGATGGAGAAGGGCATTTTAATAAACATAGTTACCAGGGGTTGGTTATAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CCA 90 bp | CTCTTCTATAACCAACCCCTGGTAACTATGTTTATTAAAATGCCCTTCTCCATCTTGGCAACAATGCGCTaGGCAATTTCAGAGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LFYNQPLVTMFIKMPFSILATMR*AISESS Trigger: GGAGCTCTCTGAAATTGCCCAGCGCATTGTTGCCAA...GATGGAGAAGGGCATTTTAATAAACATAGTTACCAGGGGTTGGTTATAGAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CCA 90 bp | AGGAAAGTGAAACTGTACCAACGGAAGGTTCATACACGTTTTATTTCTTTTTCTGCAGGAACAGTTCTGTaGAGAGCTGTGACAGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: RKVKLYQRKVHTRFISFSAGTVL*RAVTVA Trigger: GGCCACTGTCACAGCTCTCCACAGAACTGTTCCTGC...AGAAAAAGAAATAAAACGTGTATGAACCTTCCGTTGGTACAGTTTCACTTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CCA 90 bp | TTTCCAGGGTTGACTGAGCCATTCAGGTCTCCAAAATATTTAGGAGAACTGGAGTTCATGAAAGCTTCCTaGGTTGCCTTCTTGTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: FPGLTEPFRSPKYLGELEFMKAS*VAFLFA Trigger: TGCAAACAAGAAGGCAACCCAGGAAGCTTTCATGAA...CTCCAGTTCTCCTAAATATTTTGGAGACCTGAATGGCTCAGTCAACCCTGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR GCA 90 bp | TTTCCAGGGTTGACTGAGCCATTCAGGTCTCCAAAATATTTAGGAGAACTGGAGTTGGCTTTAGCAAGGTaGCTTCTAGGTAAACATGAT | + |
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Preference number: 4 (lower is better) Translates to: FPGLTEPFRSPKYLGELELALAR*LLGKHD Trigger: ATCATGTTTACCTAGAAGGCACCTTGCTAAAGCCAA...CTCCAGTTCTCCTAAATATTTTGGAGACCTGAATGGCTCAGTCAACCCTGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CCA 90 bp | TTCTATAACCAACCCCTGGTAACTATGTTTATTAAAATGCCCTTCTCCATCCTCCATAGCCACCTGCTCTaGTGTATACTTCTTCGTGCA | + |
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Preference number: 4 (lower is better) Translates to: FYNQPLVTMFIKMPFSILHSHLL*CILLRA Trigger: TGCACGAAGAAGTATACACCAGAGCAGGTGGCTATG...GAGGATGGAGAAGGGCATTTTAATAAACATAGTTACCAGGGGTTGGTTATAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS GCA 90 bp | AGCCATAGCCCGCTTCATGAAAGCTTCCTGGGTTGCCTTCTTGTTTaGAGCCTTGCCACCCCAGGCAGCCAATGCACTGGCCTGGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: SHSPLHESFLGCLLV*SLATPGSQCTGLEG Trigger: GCCCTCCAGGCCAGTGCATTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGAAGGCAACCCAGGAAGCTTTCATGAAGCGGGCTATGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS TCA 90 bp | ATAGGTGTAGGAGGCTGTGAAGAGCGACTGGGTGGCAGCAGCACCTaGAGAGCCTGTGTGAACGTACTGTCCTTGGGCCGCCTGGCAGTT | + |
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Preference number: 5 (lower is better) Translates to: IGVGGCEERLGGSST*RACVNVLSLGRLAV Trigger: AACTGCCAGGCGGCCCAAGGACAGTACGTTCACACAGGCTCTTCAGGTGCTGCTGCCACCCAGTCGCTCTTCACAGCCTCCTACACCTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS CCA 90 bp | TGGGCCGCCTGGCAGTTAGCCATAGCCCGCTTCATGAAAGCTTCCTaGGTTGCCTTCTTGTTTGCAGCCTTGCCACCCCAGGCAGCCAAT | + |
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Preference number: 5 (lower is better) Translates to: WAAWQLAIARFMKAS*VAFLFAALPPQAAN Trigger: ATTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGAAGGCAACCCAGGAAGCTTTCATGAAGCGGGCTATGGCTAACTGCCAGGCGGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS GCA 90 bp | CGCCTGGCAGTTAGCCATAGCCCGCTTCATGAAAGCTTCCTGGGTTaGCTTCTTGTTTGCAGCCTTGCCACCCCAGGCAGCCAATGCACT | + |
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Preference number: 5 (lower is better) Translates to: RLAVSHSPLHESFLG*LLVCSLATPGSQCT Trigger: AGTGCATTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGAAGGCAACCCAGGAAGCTTTCATGAAGCGGGCTATGGCTAACTGCCAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS GCA 90 bp | GCAGGAACAGTTCTGTGGAGAGCTGTGACAGTGGCCATAGCCACCTaGTCTGGTGTATACTTCTTCGTGCAGGCATGTCCAGCAGTCACC | + |
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Preference number: 5 (lower is better) Translates to: AGTVLWRAVTVAIAT*SGVYFFVQACPAVT Trigger: GGTGACTGCTGGACATGCCTGCACGAAGAAGTATACACCAGAGCAGGTGGCTATGGCCACTGTCACAGCTCTCCACAGAACTGTTCCTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS CCA 90 bp | TTGCCTTCTTGTTTGCAGCCTTGCCACCCCAGGCAGCCAATGCACTaGCCTGGAGGGCTCTTCCATATGAAAAGCTTAGTTTCCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: LPSCLQPCHPRQPMH*PGGLFHMKSLVSRA Trigger: GGCCCTGGAAACTAAGCTTTTCATATGGAAGAGCCCTCCAGGCCAGTGCATTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGAAGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS GCA 90 bp | CGGAACTGCCTTCGGTTCTCTTCGGTGTTCTCCACCTTTATCCTTTaGAGGCGGTTTCCCATGGTACCCACAGATTCATCTGCAGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RNCLRFSSVFSTFIL*RRFPMVPTDSSAAR Trigger: CCTGGCTGCAGATGAATCTGTGGGTACCATGGGAAACCGCCTGCAAAGGATAAAGGTGGAGAACACCGAAGAGAACCGAAGGCAGTTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS CCA 90 bp | TTCTTGTTTGCAGCCTTGCCACCCCAGGCAGCCAATGCACTGGCCTaGAGGGCTCTTCCATATGAAAAGCTTAGTTTCCAGGGCCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: FLFAALPPQAANALA*RALPYEKLSFQGLG Trigger: ACCAAGGCCCTGGAAACTAAGCTTTTCATATGGAAGAGCCCTCCAGGCCAGTGCATTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CAA 90 bp | TCAGCTAAAGGGAGCCATCAGCCACTTGACTGTAGTGAGCATCTGGGGCTGAGGGAGGCCATCAAGCCCTaGAATGGTGGTTTCCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: SAKGSHQPLDCSEHLGLREAIKP*NGGFLV Trigger: AACAAGGAAACCACCATTCAAGGGCTTGATGGCCTC...CCTCAGCCCCAGATGCTCACTACAGTCAAGTGGCTGATGGCTCCCTTTAGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS CCA 90 bp | CCAGACAAAAAGCAGATACCAGGAACAGCTGCAGGAACAGTTCTGTaGAGAGCTGTGACAGTGGCCATAGCCACCTGCTCTGGTGTATAC | + |
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Preference number: 5 (lower is better) Translates to: PDKKQIPGTAAGTVL*RAVTVAIATCSGVY Trigger: GTATACACCAGAGCAGGTGGCTATGGCCACTGTCACAGCTCTCCACAGAACTGTTCCTGCAGCTGTTCCTGGTATCTGCTTTTTGTCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CAA 90 bp | GTATCTGGTATAGGCAAAGACAATGAAATGCAGGATCCCTCAACAAGAGCAGGAGGGTTGCCTTCTTGTTaGCAGCCTTGCCACCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSGIGKDNEMQDPSTRAGGLPSC*QPCHPR Trigger: CCTGGGGTGGCAAGGCTGCAAACAAGAAGGCAACCC...TCCTGCTCTTGTTGAGGGATCCTGCATTTCATTGTCTTTGCCTATACCAGATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CAA 90 bp | GTATCTGGTATAGGCAAAGACAATGAAATGCAGGATCCCTCAACAAGAGCAGGAAGGATGCCCTTCCCATaGGCAACAATGCGCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: VSGIGKDNEMQDPSTRAGRMPFP*ATMRWA Trigger: TGCCCAGCGCATTGTTGCCAATGGGAAGGGCATCCT...TCCTGCTCTTGTTGAGGGATCCTGCATTTCATTGTCTTTGCCTATACCAGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS GCA 90 bp | CTCTGGCTAATGGAATTGTCCACACTAAAGAGGAGTTCTCGGAACTaGCTTCGGTTCTCTTCGGTGTTCTCCACCTTTATCCTTTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LWLMELSTLKRSSRN*LRFSSVFSTFILCR Trigger: CCTGCAAAGGATAAAGGTGGAGAACACCGAAGAGAACCGAAGGCAGTTCCGAGAACTCCTCTTTAGTGTGGACAATTCCATTAGCCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CAA 90 bp | TGCCTCTTCTATAACCAACCCCTGGTAACTATGTTTATTAAAATGCCCTTCTCCGTGAACGTACTGTCCTaGGGCCGCCTGGCAGTTAGC | + |
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Preference number: 5 (lower is better) Translates to: CLFYNQPLVTMFIKMPFSVNVLS*GRLAVS Trigger: GCTAACTGCCAGGCGGCCCAAGGACAGTACGTTCAC...GGAGAAGGGCATTTTAATAAACATAGTTACCAGGGGTTGGTTATAGAAGAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CAA 90 bp | TTTCTCAGTCGTGGCCTGTTCTTTTCTTGGATGAATGTTCTGGAACATAGGGAATGGTGGTTTCCTTGTTaGTTCCTGCAAGCGGGGCAC | + |
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Preference number: 5 (lower is better) Translates to: FLSRGLFFSWMNVLEHREWWFPC*FLQAGH Trigger: GTGCCCCGCTTGCAGGAACAAACAAGGAAACCACCA...TTCCCTATGTTCCAGAACATTCATCCAAGAAAAGAACAGGCCACGACTGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CAA 90 bp | CTCTTCTATAACCAACCCCTGGTAACTATGTTTATTAAAATGCCCTTCTCCATCTCCTGGGTTGCCTTCTaGTTTGCAGCCTTGCCACCC | + |
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Preference number: 5 (lower is better) Translates to: LFYNQPLVTMFIKMPFSISWVAF*FAALPP Trigger: GGGTGGCAAGGCTGCAAACAAGAAGGCAACCCAGGA...GATGGAGAAGGGCATTTTAATAAACATAGTTACCAGGGGTTGGTTATAGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CAA 90 bp | TTCTATAACCAACCCCTGGTAACTATGTTTATTAAAATGCCCTTCTCCATCCTCTTCTTGTTTGCAGCCTaGCCACCCCAGGCAGCCAAT | + |
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Preference number: 5 (lower is better) Translates to: FYNQPLVTMFIKMPFSILFLFAA*PPQAAN Trigger: ATTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGAA...GAGGATGGAGAAGGGCATTTTAATAAACATAGTTACCAGGGGTTGGTTATAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS-3UTR CAA 90 bp | GGCCTGTTCTTTTCTTGGATGAATGTTCTGGAACATAGGGAACTGGAAGTGTTGCAACGGTTGATAGCATaGAGGTTAAGTGTAGCATCC | + |
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Preference number: 5 (lower is better) Translates to: GLFFSWMNVLEHRELEVLQRLIA*RLSVAS Trigger: GGATGCTACACTTAACCTCAATGCTATCAACCGTTG...CAACACTTCCAGTTCCCTATGTTCCAGAACATTCATCCAAGAAAAGAACAGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS TCA 72 bp | GGAGGCTGTGAAGAGCGACTGGGTGGCAGCAGCACCTaGAGAGCCTGTGTGAACGTACTGTCCTTGGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: GGCEERLGGSST*RACVNVLSLGR Trigger: GCGGCCCAAGGACAGTACGTTCACACAGGCTCTTCAGGTGCTGCTGCCACCCAGTCGCTCTTCACAGCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS CAA 90 bp | CAGTTAGCCATAGCCCGCTTCATGAAAGCTTCCTGGGTTGCCTTCTaGTTTGCAGCCTTGCCACCCCAGGCAGCCAATGCACTGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: QLAIARFMKASWVAF*FAALPPQAANALAW Trigger: CCAGGCCAGTGCATTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGAAGGCAACCCAGGAAGCTTTCATGAAGCGGGCTATGGCTAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS GCA 72 bp | CCGCTTCATGAAAGCTTCCTGGGTTGCCTTCTTGTTTaGAGCCTTGCCACCCCAGGCAGCCAATGCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: PLHESFLGCLLV*SLATPGSQCTG Trigger: GCCAGTGCATTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGAAGGCAACCCAGGAAGCTTTCATGAAGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS CCA 72 bp | GTGCTCCAGGTCATGGTCTCCGTCAGGAAGCACCTCTaGCTCAACAATAGGGACCAGCCCATTCTGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: VLQVMVSVRKHL*LNNRDQPILLT Trigger: TGTCAGCAGAATGGGCTGGTCCCTATTGTTGAGCCAGAGGTGCTTCCTGACGGAGACCATGACCTGGAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS CCA 72 bp | TGGCAGTTAGCCATAGCCCGCTTCATGAAAGCTTCCTaGGTTGCCTTCTTGTTTGCAGCCTTGCCACCCCAG | + |
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Preference number: 6 (lower is better) Translates to: WQLAIARFMKAS*VAFLFAALPPQ Trigger: CTGGGGTGGCAAGGCTGCAAACAAGAAGGCAACCCAGGAAGCTTTCATGAAGCGGGCTATGGCTAACTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS CAA 72 bp | ATAGCCCGCTTCATGAAAGCTTCCTGGGTTGCCTTCTaGTTTGCAGCCTTGCCACCCCAGGCAGCCAATGCA | + |
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Preference number: 6 (lower is better) Translates to: IARFMKASWVAF*FAALPPQAANA Trigger: TGCATTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGAAGGCAACCCAGGAAGCTTTCATGAAGCGGGCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS GCA 72 bp | GTTCTGTGGAGAGCTGTGACAGTGGCCATAGCCACCTaGTCTGGTGTATACTTCTTCGTGCAGGCATGTCCA | + |
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Preference number: 6 (lower is better) Translates to: VLWRAVTVAIAT*SGVYFFVQACP Trigger: TGGACATGCCTGCACGAAGAAGTATACACCAGAGCAGGTGGCTATGGCCACTGTCACAGCTCTCCACAGAAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS CCA 72 bp | AAGCAGATACCAGGAACAGCTGCAGGAACAGTTCTGTaGAGAGCTGTGACAGTGGCCATAGCCACCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: KQIPGTAAGTVL*RAVTVAIATCS Trigger: AGAGCAGGTGGCTATGGCCACTGTCACAGCTCTCCACAGAACTGTTCCTGCAGCTGTTCCTGGTATCTGCTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS CCA 72 bp | TGTTTGCAGCCTTGCCACCCCAGGCAGCCAATGCACTaGCCTGGAGGGCTCTTCCATATGAAAAGCTTAGTT | + |
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Preference number: 6 (lower is better) Translates to: CLQPCHPRQPMH*PGGLFHMKSLV Trigger: AACTAAGCTTTTCATATGGAAGAGCCCTCCAGGCCAGTGCATTGGCTGCCTGGGGTGGCAAGGCTGCAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS CAA 72 bp | TTTGTTCCTGCAAGCGGGGCACCTCCTTGGTCCAACTaGATGCCCACCACAATTCCCTTCTCCTTGAGAACG | + |
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Preference number: 6 (lower is better) Translates to: FVPASGAPPWSN*MPTTIPFSLRT Trigger: CGTTCTCAAGGAGAAGGGAATTGTGGTGGGCATCAAGTTGGACCAAGGAGGTGCCCCGCTTGCAGGAACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS CAA 90 bp | TCGGAACTGCCTTCGGTTCTCTTCGGTGTTCTCCACCTTTATCCTTaGCAGGCGGTTTCCCATGGTACCCACAGATTCATCTGCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SELPSVLFGVLHLYP*QAVSHGTHRFICSQ Trigger: CTGGCTGCAGATGAATCTGTGGGTACCATGGGAAACCGCCTGCAAAGGATAAAGGTGGAGAACACCGAAGAGAACCGAAGGCAGTTCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS CAA 90 bp | GTCTCGTGGAAAAGGATCACTCCGCCGATGCTCTGGCTAATGGAATaGTCCACACTAAAGAGGAGTTCTCGGAACTGCCTTCGGTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VSWKRITPPMLWLME*STLKRSSRNCLRFS Trigger: AGAGAACCGAAGGCAGTTCCGAGAACTCCTCTTTAGTGTGGACAATTCCATTAGCCAGAGCATCGGCGGAGTGATCCTTTTCCACGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS CAA 72 bp | CCTTCGGTTCTCTTCGGTGTTCTCCACCTTTATCCTTaGCAGGCGGTTTCCCATGGTACCCACAGATTCATC | + |
|
Preference number: 6 (lower is better) Translates to: PSVLFGVLHLYP*QAVSHGTHRFI Trigger: GATGAATCTGTGGGTACCATGGGAAACCGCCTGCAAAGGATAAAGGTGGAGAACACCGAAGAGAACCGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS GCA 72 bp | CTTCGGTTCTCTTCGGTGTTCTCCACCTTTATCCTTTaGAGGCGGTTTCCCATGGTACCCACAGATTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: LRFSSVFSTFIL*RRFPMVPTDSS Trigger: AGATGAATCTGTGGGTACCATGGGAAACCGCCTGCAAAGGATAAAGGTGGAGAACACCGAAGAGAACCGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS CCA 72 bp | AGGGTCTCGTGGAAAAGGATCACTCCGCCGATGCTCTaGCTAATGGAATTGTCCACACTAAAGAGGAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RVSWKRITPPML*LMELSTLKRSS Trigger: AGAACTCCTCTTTAGTGTGGACAATTCCATTAGCCAGAGCATCGGCGGAGTGATCCTTTTCCACGAGACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS CAA 72 bp | AAAAGGATCACTCCGCCGATGCTCTGGCTAATGGAATaGTCCACACTAAAGAGGAGTTCTCGGAACTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: KRITPPMLWLME*STLKRSSRNCL Trigger: AAGGCAGTTCCGAGAACTCCTCTTTAGTGTGGACAATTCCATTAGCCAGAGCATCGGCGGAGTGATCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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| CDS GCA 72 bp | ATGGAATTGTCCACACTAAAGAGGAGTTCTCGGAACTaGCTTCGGTTCTCTTCGGTGTTCTCCACCTTTATC | + |
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Preference number: 6 (lower is better) Translates to: MELSTLKRSSRN*LRFSSVFSTFI Trigger: GATAAAGGTGGAGAACACCGAAGAGAACCGAAGGCAGTTCCGAGAACTCCTCTTTAGTGTGGACAATTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029987.10 |
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