Pregenerated sensors for ALDOART2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000063129

Ensembl transcript IDs: ENSMUST00000080123.2

Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR TCA 90 bp	ACCTCCGCGCCCAGCAAATCTTCAAGAGAAAGGGCCCTTCCTCCTTCCCCCTTTGCGGGATGGAAGGGATaGCAGTCAGCATTCACAGAC	+
Preference number: 2 (lower is better) Translates to: TSAPSKSSRERALPPSPFAGWKG*QSAFTD Trigger: GTCTGTGAATGCTGACTGTCATCCCTTCCATCCCGC...AAAGGGGGAAGGAGGAAGGGCCCTTTCTCTTGAAGATTTGCTGGGCGCGGAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
3UTR CAA 90 bp	ACAGACAATACCACACACCAAAGTCGTGAGGGGTGGCAAGAGGGGTaGATGGGAGAGAGCCTGAAGGCTACCTCTTCTCAAGAGCAAGTG	+
Preference number: 2 (lower is better) Translates to: TDNTTHQSREGWQEG*MGESLKATSSQEQV Trigger: CACTTGCTCTTGAGAAGAGGTAGCCTTCAGGCTCTCTCCCATCAACCCCTCTTGCCACCCCTCACGACTTTGGTGTGTGGTATTGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
3UTR-3UTR TCA 90 bp	AACACCTGTTTGAAGCAGACTTTAAAAACACATGGGATGGCTGGAGTGGTATTACCTTTAAATAGTTGTTaGCTGGCAGCGGGATGGAAG	+
Preference number: 2 (lower is better) Translates to: NTCLKQTLKTHGMAGVVLPLNSC*LAAGWK Trigger: CTTCCATCCCGCTGCCAGTCAACAACTATTTAAAGG...TAATACCACTCCAGCCATCCCATGTGTTTTTAAAGTCTGCTTCAAACAGGTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
3UTR-3UTR CAA 90 bp	ACCTCCGCGCCCAGCAAATCTTCAAGAGAAAGGGCCCTTCCTCCTTCCCCCTTTGGGTGGCAAGAGGGGTaGATGGGAGAGAGCCTGAAG	+
Preference number: 3 (lower is better) Translates to: TSAPSKSSRERALPPSPFGWQEG*MGESLK Trigger: CTTCAGGCTCTCTCCCATCAACCCCTCTTGCCACCC...AAAGGGGGAAGGAGGAAGGGCCCTTTCTCTTGAAGATTTGCTGGGCGCGGAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
3UTR CCA 72 bp	ACAGAAACACATTTGCTGATATGTAGACTCGAGGTTTaGCGAGTGCTCACTGACCAAACAGTTCGAATTTTC	+
Preference number: 3 (lower is better) Translates to: TETHLLICRLEV*RVLTDQTVRIF Trigger: GAAAATTCGAACTGTTTGGTCAGTGAGCACTCGCCAAACCTCGAGTCTACATATCAGCAAATGTGTTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
CDS-3UTR GCA 90 bp	ACCTCCGCGCCCAGCAAATCTTCAAGAGAAAGGGCCCTTCCTCCTTCCCCCTTTCTCGCCGTTAGTTCCTaGCAGGGGCACCACGCCCTT	+
Preference number: 4 (lower is better) Translates to: TSAPSKSSRERALPPSPFLAVSS*QGHHAL Trigger: AAGGGCGTGGTGCCCCTGGCAGGAACTAACGGCGAG...AAAGGGGGAAGGAGGAAGGGCCCTTTCTCTTGAAGATTTGCTGGGCGCGGAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
CDS-3UTR GCA 90 bp	AAGTGGGTAGGCAGGGACCTGGGGTGCTGCAGGGGCAGCCTTAGGCCACCTCTGCTGCCCCTGACTCATTaGTTGGGGTGTACTTTCCTT	+
Preference number: 4 (lower is better) Translates to: KWVGRDLGCCRGSLRPPLLPLTH*LGCTFL Trigger: AAGGAAAGTACACCCCAAGCAATGAGTCAGGGGCAG...CAGAGGTGGCCTAAGGCTGCCCCTGCAGCACCCCAGGTCCCTGCCTACCCACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
CDS-3UTR CCA 90 bp	CCTCCGCGCCCAGCAAATCTTCAAGAGAAAGGGCCCTTCCTCCTTCCCCCTTTAGCAAGGCTGTTGGCCTaGGCTCGCTTGATGTACTCC	+
Preference number: 4 (lower is better) Translates to: PPRPANLQEKGPFLLPPLARLLA*ARLMYS Trigger: GGAGTACATCAAGCGAGCCCAGGCCAACAGCCTTGC...TAAAGGGGGAAGGAGGAAGGGCCCTTTCTCTTGAAGATTTGCTGGGCGCGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
CDS-3UTR GCA 90 bp	ACCTCCGCGCCCAGCAAATCTTCAAGAGAAAGGGCCCTTCCTCCTTCCCCCTTTCACTGTGCGACGAAGTaGTGTGACAGTTGCCATGGC	+
Preference number: 4 (lower is better) Translates to: TSAPSKSSRERALPPSPFHCATK*CDSCHG Trigger: GCCATGGCAACTGTCACAGCACTTCGTCGCACAGTG...AAAGGGGGAAGGAGGAAGGGCCCTTTCTCTTGAAGATTTGCTGGGCGCGGAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
CDS-3UTR CCA 90 bp	CACCTCCGCGCCCAGCAAATCTTCAAGAGAAAGGGCCCTTCCTCCTTCCCCCTTTGGTACAGTGTCTCATaGAAGAGGATCACACCCCCA	+
Preference number: 4 (lower is better) Translates to: HLRAQQIFKRKGPSSFPLWYSVS*KRITPP Trigger: TGGGGGTGTGATCCTCTTCCATGAGACACTGTACCA...AAGGGGGAAGGAGGAAGGGCCCTTTCTCTTGAAGATTTGCTGGGCGCGGAGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
CDS-3UTR GCA 90 bp	GTGGCAAGAGGGGTTGATGGGAGAGAGCCTGAAGGCTACCTCTTCTCAAGAGCACCACAATGGGTACAATaGCATTCTGCTGGCAGATGC	+
Preference number: 4 (lower is better) Translates to: VARGVDGREPEGYLFSRAPQWVQ*HSAGRC Trigger: GCATCTGCCAGCAGAATGGCATTGTACCCATTGTGG...TGCTCTTGAGAAGAGGTAGCCTTCAGGCTCTCTCCCATCAACCCCTCTTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
CDS-3UTR CCA 90 bp	CCACCTCCGCGCCCAGCAAATCTTCAAGAGAAAGGGCCCTTCCTCCTTCCCCCTTGGCAATCTCTTCACTaGAAAATACCTGAGTGCAAG	+
Preference number: 4 (lower is better) Translates to: PPPRPANLQEKGPFLLPPWQSLH*KIPECK Trigger: CTTGCACTCAGGTATTTTCCAGTGAAGAGATTGCCA...AGGGGGAAGGAGGAAGGGCCCTTTCTCTTGAAGATTTGCTGGGCGCGGAGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
CDS-3UTR TCA 90 bp	AACACCTGTTTGAAGCAGACTTTAAAAACACATGGGATGGCTGGAGTGGTATTACTCCAGACAGGAAAGTaGCTCCAGGGACAGCAGGGG	+
Preference number: 4 (lower is better) Translates to: NTCLKQTLKTHGMAGVVLLQTGK*LQGQQG Trigger: CCCCTGCTGTCCCTGGAGTCACTTTCCTGTCTGGAG...TAATACCACTCCAGCCATCCCATGTGTTTTTAAAGTCTGCTTCAAACAGGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
CDS-3UTR CCA 90 bp	AACACCTGTTTGAAGCAGACTTTAAAAACACATGGGATGGCTGGAGTGGTATTAGCACACAGCGCCATTTaGCAAAATCGGCCCCATCCT	+
Preference number: 4 (lower is better) Translates to: NTCLKQTLKTHGMAGVVLAHSAI*QNRPHP Trigger: AGGATGGGGCCGATTTTGCCAAATGGCGCTGTGTGC...TAATACCACTCCAGCCATCCCATGTGTTTTTAAAGTCTGCTTCAAACAGGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
CDS-3UTR GCA 90 bp	TCGAATTTTCAAGGTTACAGTAGTTCCCAGACAGAAAGAAAGAAACAAACAAACGGATCACACCCCCAATaGAGGGATTCACACGGTCGT	+
Preference number: 4 (lower is better) Translates to: SNFQGYSSSQTERKKQTNGSHPQ*RDSHGR Trigger: ACGACCGTGTGAATCCCTGCATTGGGGGTGTGATCC...GTTTGTTTGTTTCTTTCTTTCTGTCTGGGAACTACTGTAACCTTGAAAATTCGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
CDS-3UTR CCA 90 bp	GTTCGAATTTTCAAGGTTACAGTAGTTCCCAGACAGAAAGAAAGAAACAAACAAATCAGGGAGGATTTCTaGCTCCACAATGGGTACAAT	+
Preference number: 4 (lower is better) Translates to: VRIFKVTVVPRQKERNKQIREDF*LHNGYN Trigger: ATTGTACCCATTGTGGAGCCAGAAATCCTCCCTGAT...TTGTTTGTTTCTTTCTTTCTGTCTGGGAACTACTGTAACCTTGAAAATTCGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
CDS-3UTR CAA 90 bp	CACCAAAGTCGTGAGGGGTGGCAAGAGGGGTTGATGGGAGAGAGCCTGAAGGCTAGGGGCACCACGCCCTaGTCCACCTTAATGCCCACA	+
Preference number: 5 (lower is better) Translates to: HQSREGWQEGLMGESLKARGTTP*STLMPT Trigger: TGTGGGCATTAAGGTGGACAAGGGCGTGGTGCCCCT...AGCCTTCAGGCTCTCTCCCATCAACCCCTCTTGCCACCCCTCACGACTTTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
CDS-3UTR CAA 90 bp	CACCTCCGCGCCCAGCAAATCTTCAAGAGAAAGGGCCCTTCCTCCTTCCCCCTTCCTGCGGTGACCATGTaGGGCTTCAGTAAGGTTCCT	+
Preference number: 5 (lower is better) Translates to: HLRAQQIFKRKGPSSFPLPAVTM*GFSKVP Trigger: AGGAACCTTACTGAAGCCCAACATGGTCACCGCAGG...AAGGGGGAAGGAGGAAGGGCCCTTTCTCTTGAAGATTTGCTGGGCGCGGAGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
CDS-3UTR CAA 90 bp	GTGGCAAGAGGGGTTGATGGGAGAGAGCCTGAAGGCTACCTCTTCTCAAGAGCAGCTGCCCCTGACTCATaGCTTGGGGTGTACTTTCCT	+
Preference number: 5 (lower is better) Translates to: VARGVDGREPEGYLFSRAAAPDS*LGVYFP Trigger: AGGAAAGTACACCCCAAGCAATGAGTCAGGGGCAGC...TGCTCTTGAGAAGAGGTAGCCTTCAGGCTCTCTCCCATCAACCCCTCTTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
CDS-3UTR CAA 90 bp	TTGAAGCAGACTTTAAAAACACATGGGATGGCTGGAGTGGTATTACAGACATACAGCACACAGCGCCATTaGGCAAAATCGGCCCCATCC	+
Preference number: 5 (lower is better) Translates to: LKQTLKTHGMAGVVLQTYSTQRH*AKSAPS Trigger: GGATGGGGCCGATTTTGCCAAATGGCGCTGTGTGCT...GTATGTCTGTAATACCACTCCAGCCATCCCATGTGTTTTTAAAGTCTGCTTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080123.2
CDS-3UTR CAA 90 bp	TCGAATTTTCAAGGTTACAGTAGTTCCCAGACAGAAAGAAAGAAACAAACAAACCTTGATGTACTCCTCTaGGGCATCCTTCGTGTTCTC	+
Preference number: 5 (lower is better) Translates to: SNFQGYSSSQTERKKQTNLDVLL*GILRVL Trigger: GAGAACACGAAGGATGCCCAAGAGGAGTACATCAAG...GTTTGTTTGTTTCTTTCTTTCTGTCTGGGAACTACTGTAACCTTGAAAATTCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080123.2