Pregenerated sensors for ALDOART1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059343Ensembl transcript IDs: ENSMUST00000078617.5, ENSMUST00000179234.2
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTATGGACTGGTTGTTTACTGGCAGTaGGCTGGAAGGGATGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: PFKSFHKPLLASFQTYGLVVYWQ*AGRDGR Trigger: TCTGCCATCCCTTCCAGCCCACTGCCAGTAAACAAC...CAGTCCATAAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| 3UTR-3UTR TCA 90 bp | AGACAACACCACACACACATGAGGGCAGCAAGAGTGATGAGAAAGAATCTGAAGAAGAGCCTGGGGTGTTaGTGCAGCAGCATTAGATTA | + |
|
Preference number: 2 (lower is better) Translates to: RQHHTHMRAARVMRKNLKKSLGC*CSSIRL Trigger: TAATCTAATGCTGCTGCATCAACACCCCAGGCTCTT...CTTCAGATTCTTTCTCATCACTCTTGCTGCCCTCATGTGTGTGTGGTGTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTATGGACTGCCCAGGGACAGCAGGTaGCACTGTGCGACGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PFKSFHKPLLASFQTYGLPRDSR*HCATKC Trigger: GCACTTCGTCGCACAGTGCCACCTGCTGTCCCTGGG...CAGTCCATAAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CCA 90 bp | ATAGTTGTTTACTGGCAGTGGGCTGGAAGGGATGGCAGATTTACATTCACAGACCCCAGGGACAGCAGGTaGCACTGTGCGACGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IVVYWQWAGRDGRFTFTDPRDSR*HCATKC Trigger: GCACTTCGTCGCACAGTGCCACCTGCTGTCCCTGGG...GTCTGTGAATGTAAATCTGCCATCCCTTCCAGCCCACTGCCAGTAAACAACTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR TCA 90 bp | CCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTATGGACTGCTCCAGACAGAAAAGTaGCCCCAGGGACAGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PFKSFHKPLLASFQTYGLLQTEK*PQGQQV Trigger: CACCTGCTGTCCCTGGGGTCACTTTTCTGTCTGGAG...CAGTCCATAAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR GCA 90 bp | ATAGTTGTTTACTGGCAGTGGGCTGGAAGGGATGGCAGATTTACATTCACAGACAGCCCAGAGTGGGGTTaGTCATTGGCATCTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IVVYWQWAGRDGRFTFTDSPEWG*SLASGG Trigger: TCCCCCAGATGCCAATGAGCAACCCCACTCTGGGCT...GTCTGTGAATGTAAATCTGCCATCCCTTCCAGCCCACTGCCAGTAAACAACTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078617.5 |
||
| CDS-3UTR GCA 90 bp | GCCTTTTCTCCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTCTGCTCTGTGGTCAGTaGTGGGTATGGGCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AFSPFKSFHKPLLASFQTLLCGQ*WVWAGH Trigger: ATGCCCTGCCCATACCCAGCACTGACCACAGAGCAG...AGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGGAGAAAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR GCA 90 bp | CCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTATGGACTGCTGCTCTGTGGTCAGTaGTGGGTATGGGCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFKSFHKPLLASFQTYGLLLCGQ*WVWAGH Trigger: ATGCCCTGCCCATACCCAGCACTGACCACAGAGCAG...CAGTCCATAAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR GCA 90 bp | AGACAACACCACACACACATGAGGGCAGCAAGAGTGATGAGAAAGAATCTGAAGCAGCCAGGATGCCCTTaGCTGGAGCCACAATTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQHHTHMRAARVMRKNLKQPGCP*LEPQFG Trigger: ACCGAATTGTGGCTCCAGGCAAGGGCATCCTGGCTG...CTTCAGATTCTTTCTCATCACTCTTGCTGCCCTCATGTGTGTGTGGTGTTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR GCA 90 bp | ATAGTTGTTTACTGGCAGTGGGCTGGAAGGGATGGCAGATTTACATTCACAGACCAGCCAGGATGCCCTTaGCTGGAGCCACAATTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: IVVYWQWAGRDGRFTFTDQPGCP*LEPQFG Trigger: ACCGAATTGTGGCTCCAGGCAAGGGCATCCTGGCTG...GTCTGTGAATGTAAATCTGCCATCCCTTCCAGCCCACTGCCAGTAAACAACTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CCA 90 bp | ATAGTTGTTTACTGGCAGTGGGCTGGAAGGGATGGCAGATTTACATTCACAGACGGTCAGTGCTGGGTATaGGCAGGGCATAGTTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: IVVYWQWAGRDGRFTFTDGQCWV*AGHSSG Trigger: ACCGGAACTATGCCCTGCCCATACCCAGCACTGACC...GTCTGTGAATGTAAATCTGCCATCCCTTCCAGCCCACTGCCAGTAAACAACTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078617.5 |
||
| CDS-3UTR CCA 90 bp | GCCTTTTCTCCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTGCAGTCAGCAGCAACTaGCGGAAGAAGCGCCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AFSPFKSFHKPLLASFQTAVSSN*RKKRLF Trigger: GAACAGGCGCTTCTTCCGCCAGTTGCTGCTGACTGC...AGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGGAGAAAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CCA 90 bp | AGACAACACCACACACACATGAGGGCAGCAAGAGTGATGAGAAAGAATCTGAAGGCAGTCAGCAGCAACTaGCGGAAGAAGCGCCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RQHHTHMRAARVMRKNLKAVSSN*RKKRLF Trigger: GAACAGGCGCTTCTTCCGCCAGTTGCTGCTGACTGC...CTTCAGATTCTTTCTCATCACTCTTGCTGCCCTCATGTGTGTGTGGTGTTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTTCTCCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTCTCCAGACAGAAAAGTaGCCCCAGGGACAGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PFLPSNPSISPCLLPFKLLQTEK*PQGQQV Trigger: CACCTGCTGTCCCTGGGGTCACTTTTCTGTCTGGAG...AAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGGAGAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTATGGACTGCTCTGTGGTCAGTGCTaGGTATGGGCAGGGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: PFKSFHKPLLASFQTYGLLCGQC*VWAGHS Trigger: ACTATGCCCTGCCCATACCCAGCACTGACCACAGAG...CAGTCCATAAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078617.5 |
||
| CDS-3UTR CCA 90 bp | CCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTATGGACTGGAGATTCGCTGGCTGTaGCTCCAGTCTTGCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: PFKSFHKPLLASFQTYGLEIRWL*LQSCHL Trigger: CAAGTGGCAAGACTGGAGCCACAGCCAGCGAATCTC...CAGTCCATAAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR TCA 90 bp | ATAGTTGTTTACTGGCAGTGGGCTGGAAGGGATGGCAGATTTACATTCACAGACACAGGCGGGTCATGTTaGAGATGGACACATCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IVVYWQWAGRDGRFTFTDTGGSC*RWTHLA Trigger: GGCAAGATGTGTCCATCTTCAACATGACCCGCCTGT...GTCTGTGAATGTAAATCTGCCATCCCTTCCAGCCCACTGCCAGTAAACAACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078617.5 |
||
| CDS-3UTR TCA 90 bp | CCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTATGGACTGTGCGACGAAGTGCTGTaGCTGTTGCCATGGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: PFKSFHKPLLASFQTYGLCDEVL*LLPWQS Trigger: AGATTGCCATGGCAACAGTCACAGCACTTCGTCGCA...CAGTCCATAAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR GCA 90 bp | CCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTATGGACTGGGATCACACCCCCAATaGAGGGATTCACACGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFKSFHKPLLASFQTYGLGSHPQ*RDSHGH Trigger: ATGACCGTGTGAATCCCTGCATTGGGGGTGTGATCC...CAGTCCATAAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTATGGACTGAGCCCATCTAGCCCTTaGGTAGTAGTCTCGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: PFKSFHKPLLASFQTYGLSPSSP*VVVSPL Trigger: CAATGGCGAGACTACTACCCAAGGGCTAGATGGGCT...CAGTCCATAAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTTTCTCCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTGAAAGTCAAGGCCCATaGCTTCAGCAGGGGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: AFSPFKSFHKPLLASFQTESQGP*LQQGTL Trigger: AAGTGTCCCCTGCTGAAGCCATGGGCCTTGACTTTC...AGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGGAGAAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTTCTCCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTTGCGACGAAGTGCTGTaGCTGTTGCCATGGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: PFLPSNPSISPCLLPFKLCDEVL*LLPWQS Trigger: AGATTGCCATGGCAACAGTCACAGCACTTCGTCGCA...AAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGGAGAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR TCA 90 bp | AGACAACACCACACACACATGAGGGCAGCAAGAGTGATGAGAAAGAATCTGAAGTTGATGTACTCCTCCTaGGCTGCCTTCAGATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RQHHTHMRAARVMRKNLKLMYSS*AAFRFS Trigger: GGAGAATCTGAAGGCAGCTCAGGAGGAGTACATCAA...CTTCAGATTCTTTCTCATCACTCTTGCTGCCCTCATGTGTGTGTGGTGTTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTTCTCCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTTCAGTGCCAATGGACTaGAGGCGATTGCCCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PFLPSNPSISPCLLPFKLSVPMD*RRLPML Trigger: AAGCATGGGCAATCGCCTGCAGTCCATTGGCACTGA...AAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGGAGAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTTCTCCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTGGATCACACCCCCAATaGAGGGATTCACACGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFLPSNPSISPCLLPFKLGSHPQ*RDSHGH Trigger: ATGACCGTGTGAATCCCTGCATTGGGGGTGTGATCC...AAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGGAGAAAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTTTCTCCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTGAGACTGTTGGCCAGTaGTCTCTTGATGTACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AFSPFKSFHKPLLASFQTETVGQ*SLDVLL Trigger: GAGGAGTACATCAAGAGAGCACTGGCCAACAGTCTC...AGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGGAGAAAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR GCA 90 bp | AGACAACACCACACACACATGAGGGCAGCAAGAGTGATGAGAAAGAATCTGAAGGAGACTGTTGGCCAGTaGTCTCTTGATGTACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQHHTHMRAARVMRKNLKETVGQ*SLDVLL Trigger: GAGGAGTACATCAAGAGAGCACTGGCCAACAGTCTC...CTTCAGATTCTTTCTCATCACTCTTGCTGCCCTCATGTGTGTGTGGTGTTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTTCTCCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTTCCTTTGTCTGTTGGTaGGTGTTGTCCAGCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PFLPSNPSISPCLLPFKLSFVCW*VLSSPE Trigger: CTCTGGGCTGGACAACACCCACCAACAGACAAAGGA...AAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGGAGAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078617.5 |
||
| CDS-3UTR CCA 90 bp | CCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTATGGACTGAACTCCTTTGTCTGTTaGTGGGTGTTGTCCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PFKSFHKPLLASFQTYGLNSFVC*WVLSSP Trigger: TGGGCTGGACAACACCCACCAACAGACAAAGGAGTT...CAGTCCATAAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078617.5 |
||
| CDS-3UTR CCA 90 bp | GCCTTTTCTCCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTCGTACAGTGTCTCATaGAAGAGGATCACACCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFSPFKSFHKPLLASFQTSYSVS*KRITPP Trigger: TGGGGGTGTGATCCTCTTCCATGAGACACTGTACGA...AGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGGAGAAAAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CCA 90 bp | AGACAACACCACACACACATGAGGGCAGCAAGAGTGATGAGAAAGAATCTGAAGTCGTACAGTGTCTCATaGAAGAGGATCACACCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQHHTHMRAARVMRKNLKSYSVS*KRITPP Trigger: TGGGGGTGTGATCCTCTTCCATGAGACACTGTACGA...CTTCAGATTCTTTCTCATCACTCTTGCTGCCCTCATGTGTGTGTGGTGTTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTTCTCCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTAGCCCATCTAGCCCTTaGGTAGTAGTCTCGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: PFLPSNPSISPCLLPFKLSPSSP*VVVSPL Trigger: CAATGGCGAGACTACTACCCAAGGGCTAGATGGGCT...AAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGGAGAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTTCTCCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTGAAAGTCAAGGCCCATaGCTTCAGCAGGGGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: PFLPSNPSISPCLLPFKLESQGP*LQQGTL Trigger: AAGTGTCCCCTGCTGAAGCCATGGGCCTTGACTTTC...AAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGGAGAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTTCTCCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTTTGATGTACTCCTCCTaGGCTGCCTTCAGATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PFLPSNPSISPCLLPFKLLMYSS*AAFRFS Trigger: GGAGAATCTGAAGGCAGCTCAGGAGGAGTACATCAA...AAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGGAGAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR GCA 90 bp | ATAGTTGTTTACTGGCAGTGGGCTGGAAGGGATGGCAGATTTACATTCACAGACGTACTCCTCCTGAGCTaGCTTCAGATTCTCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IVVYWQWAGRDGRFTFTDVLLLS*LQILLF Trigger: AAAGAGGAGAATCTGAAGGCAGCTCAGGAGGAGTAC...GTCTGTGAATGTAAATCTGCCATCCCTTCCAGCCCACTGCCAGTAAACAACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR GCA 90 bp | AGACAACACCACACACACATGAGGGCAGCAAGAGTGATGAGAAAGAATCTGAAGGTACTCCTCCTGAGCTaGCTTCAGATTCTCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQHHTHMRAARVMRKNLKVLLLS*LQILLF Trigger: AAAGAGGAGAATCTGAAGGCAGCTCAGGAGGAGTAC...CTTCAGATTCTTTCTCATCACTCTTGCTGCCCTCATGTGTGTGTGGTGTTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CCA 90 bp | ATAGTTGTTTACTGGCAGTGGGCTGGAAGGGATGGCAGATTTACATTCACAGACTTGCTCATTGGCATCTaGGGGAAAGGAAAAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IVVYWQWAGRDGRFTFTDLLIGI*GKGKSH Trigger: ATGGCTTTTTCCTTTCCCCCAGATGCCAATGAGCAA...GTCTGTGAATGTAAATCTGCCATCCCTTCCAGCCCACTGCCAGTAAACAACTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078617.5 |
||
| CDS-3UTR CCA 90 bp | GCCTTTTCTCCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTTGGACTTAATAACTTaGGGGAAAGGACGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: AFSPFKSFHKPLLASFQTLDLIT*GKGRPS Trigger: TGATGGACGTCCTTTCCCCCAAGTTATTAAGTCCAA...AGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGGAGAAAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CCA 90 bp | ATAGTTGTTTACTGGCAGTGGGCTGGAAGGGATGGCAGATTTACATTCACAGACTTGGACTTAATAACTTaGGGGAAAGGACGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: IVVYWQWAGRDGRFTFTDLDLIT*GKGRPS Trigger: TGATGGACGTCCTTTCCCCCAAGTTATTAAGTCCAA...GTCTGTGAATGTAAATCTGCCATCCCTTCCAGCCCACTGCCAGTAAACAACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTATGGACTGCAACAACTCAAGTCATaGTCACCATCAGGGAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: PFKSFHKPLLASFQTYGLQQLKS*SPSGRI Trigger: AATTCTCCCTGATGGTGACCATGACTTGAGTTGTTG...CAGTCCATAAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CCA 90 bp | ATAGTTGTTTACTGGCAGTGGGCTGGAAGGGATGGCAGATTTACATTCACAGACCAACAACTCAAGTCATaGTCACCATCAGGGAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: IVVYWQWAGRDGRFTFTDQQLKS*SPSGRI Trigger: AATTCTCCCTGATGGTGACCATGACTTGAGTTGTTG...GTCTGTGAATGTAAATCTGCCATCCCTTCCAGCCCACTGCCAGTAAACAACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS TCA 90 bp | TCGCTGGCTGTGGCTCCAGTCTTGCCACTTGGGGTATACTTTCCTTaGCAAGCGAGACTGTTGGCCAGTGCTCTCTTGATGTACTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLAVAPVLPLGVYFP*QARLLASALLMYSS Trigger: GGAGGAGTACATCAAGAGAGCACTGGCCAACAGTCTCGCTTGTCAAGGAAAGTATACCCCAAGTGGCAAGACTGGAGCCACAGCCAGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CAA 90 bp | AGACAACACCACACACACATGAGGGCAGCAAGAGTGATGAGAAAGAATCTGAAGGTCTGTTGGTGGGTGTaGTCCAGCCCAGAGTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RQHHTHMRAARVMRKNLKVCWWV*SSPEWG Trigger: ACCCCACTCTGGGCTGGACAACACCCACCAACAGAC...CTTCAGATTCTTTCTCATCACTCTTGCTGCCCTCATGTGTGTGTGGTGTTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078617.5 |
||
| CDS-3UTR CAA 90 bp | ATAGTTGTTTACTGGCAGTGGGCTGGAAGGGATGGCAGATTTACATTCACAGACGTAGTAGTCTCGCCATaGGTTCCTGCCAGGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: IVVYWQWAGRDGRFTFTDVVVSP*VPARGT Trigger: GGTGCCCCTGGCAGGAACCAATGGCGAGACTACTAC...GTCTGTGAATGTAAATCTGCCATCCCTTCCAGCCCACTGCCAGTAAACAACTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTTCTCCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTGTAGTAGTCTCGCCATaGGTTCCTGCCAGGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: PFLPSNPSISPCLLPFKLVVVSP*VPARGT Trigger: GGTGCCCCTGGCAGGAACCAATGGCGAGACTACTAC...AAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGGAGAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CAA 90 bp | AGACAACACCACACACACATGAGGGCAGCAAGAGTGATGAGAAAGAATCTGAAGGAGTGGGGTTGCTCATaGGCATCTGGGGGAAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RQHHTHMRAARVMRKNLKEWGCS*ASGGKE Trigger: TTCCTTTCCCCCAGATGCCAATGAGCAACCCCACTC...CTTCAGATTCTTTCTCATCACTCTTGCTGCCCTCATGTGTGTGTGGTGTTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078617.5 |
||
| CDS-3UTR CAA 90 bp | AGACAACACCACACACACATGAGGGCAGCAAGAGTGATGAGAAAGAATCTGAAGGACAGGCGGGTCATGTaGAAGATGGACACATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RQHHTHMRAARVMRKNLKDRRVM*KMDTSC Trigger: GCAAGATGTGTCCATCTTCAACATGACCCGCCTGTC...CTTCAGATTCTTTCTCATCACTCTTGCTGCCCTCATGTGTGTGTGGTGTTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078617.5 |
||
| CDS-3UTR CAA 90 bp | ATAGTTGTTTACTGGCAGTGGGCTGGAAGGGATGGCAGATTTACATTCACAGACTTCAGCAGGGGACACTaGTTGATAGCGTTGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IVVYWQWAGRDGRFTFTDFSRGH*LIALRL Trigger: CAACCTCAACGCTATCAACAAGTGTCCCCTGCTGAA...GTCTGTGAATGTAAATCTGCCATCCCTTCCAGCCCACTGCCAGTAAACAACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CAA 90 bp | GCCTTTTCTCCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTTCAGCAGGGGACACTaGTTGATAGCGTTGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AFSPFKSFHKPLLASFQTFSRGH*LIALRL Trigger: CAACCTCAACGCTATCAACAAGTGTCCCCTGCTGAA...AGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGGAGAAAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CAA 90 bp | ATAGTTGTTTACTGGCAGTGGGCTGGAAGGGATGGCAGATTTACATTCACAGACTGGGGTATACTTTCCTaGACAAGCGAGACTGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: IVVYWQWAGRDGRFTFTDWGILS*TSETVG Trigger: GCCAACAGTCTCGCTTGTCAAGGAAAGTATACCCCA...GTCTGTGAATGTAAATCTGCCATCCCTTCCAGCCCACTGCCAGTAAACAACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CAA 90 bp | AGACAACACCACACACACATGAGGGCAGCAAGAGTGATGAGAAAGAATCTGAAGCCTTTCCTAACTCCTTaGTCTGTTGGTGGGTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RQHHTHMRAARVMRKNLKPFLTP*SVGGCC Trigger: ACAACACCCACCAACAGACAAAGGAGTTAGGAAAGG...CTTCAGATTCTTTCTCATCACTCTTGCTGCCCTCATGTGTGTGTGGTGTTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078617.5 |
||
| CDS-3UTR CAA 90 bp | AGACAACACCACACACACATGAGGGCAGCAAGAGTGATGAGAAAGAATCTGAAGCTTGGACTTAATAACTaGGGGGAAAGGACGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: RQHHTHMRAARVMRKNLKLGLNN*GERTSI Trigger: GATGGACGTCCTTTCCCCCAAGTTATTAAGTCCAAG...CTTCAGATTCTTTCTCATCACTCTTGCTGCCCTCATGTGTGTGTGGTGTTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTTCTCCCTTCAAATCCTTCCATAAGCCCCTGCTTGCTTCCTTTCAAACTTTGGGGTATACTTTCCTaGACAAGCGAGACTGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PFLPSNPSISPCLLPFKLWGILS*TSETVG Trigger: GCCAACAGTCTCGCTTGTCAAGGAAAGTATACCCCA...AAGTTTGAAAGGAAGCAAGCAGGGGCTTATGGAAGGATTTGAAGGGAGAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS CCA 72 bp | CAGGGATTCACACGGTCATCAGCAGTCAGCAGCAACTaGCGGAAGAAGCGCCTGTTCTCTTCAGTGTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: QGFTRSSAVSSN*RKKRLFSSVFS Trigger: TGAGAACACTGAAGAGAACAGGCGCTTCTTCCGCCAGTTGCTGCTGACTGCTGATGACCGTGTGAATCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS CAA 90 bp | TTCGCTGGCTGTGGCTCCAGTCTTGCCACTTGGGGTATACTTTCCTaGACAAGCGAGACTGTTGGCCAGTGCTCTCTTGATGTACTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FAGCGSSLATWGILS*TSETVGQCSLDVLL Trigger: GAGGAGTACATCAAGAGAGCACTGGCCAACAGTCTCGCTTGTCAAGGAAAGTATACCCCAAGTGGCAAGACTGGAGCCACAGCCAGCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS TCA 72 bp | GTGGCTCCAGTCTTGCCACTTGGGGTATACTTTCCTTaGCAAGCGAGACTGTTGGCCAGTGCTCTCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: VAPVLPLGVYFP*QARLLASALLM Trigger: CATCAAGAGAGCACTGGCCAACAGTCTCGCTTGTCAAGGAAAGTATACCCCAAGTGGCAAGACTGGAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||
| CDS CAA 90 bp | GTGGTAGTACTTTCCTTTCCTAACTCCTTTGTCTGTTGGTGGGTGTaGTCCAGCCCAGAGTGGGGTTGCTCATTGGCATCTGGGGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VVVLSFPNSFVCWWV*SSPEWGCSLASGGK Trigger: CTTTCCCCCAGATGCCAATGAGCAACCCCACTCTGGGCTGGACAACACCCACCAACAGACAAAGGAGTTAGGAAAGGAAAGTACTACCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078617.5 |
||
| CDS CAA 72 bp | TGTGGCTCCAGTCTTGCCACTTGGGGTATACTTTCCTaGACAAGCGAGACTGTTGGCCAGTGCTCTCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: CGSSLATWGILS*TSETVGQCSLD Trigger: ATCAAGAGAGCACTGGCCAACAGTCTCGCTTGTCAAGGAAAGTATACCCCAAGTGGCAAGACTGGAGCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078617.5 ENSMUST00000179234.2 |
||