Pregenerated sensors for ALDOA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030695, ENSMUSG00000114515Ensembl transcript IDs: ENSMUST00000032934.12, ENSMUST00000087566.11, ENSMUST00000106348.8, ENSMUST00000133514.8, ENSMUST00000153686.2, ENSMUST00000205336.2, ENSMUST00000207534.3
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACAGCTCCAGCAACAGTCTTGGGTCTCGGAGGCACCTTGTTTCCTaGAAGGGGAGCTGCAGTCTGTGCAGCAGCCCTGGGCCAGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: HSSSNSLGSRRHLVS*KGSCSLCSSPGPAD Trigger: GTCTGCTGGCCCAGGGCTGCTGCACAGACTGCAGCTCCCCTTGCAGGAAACAAGGTGCCTCCGAGACCCAAGACTGTTGCTGGAGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| 3UTR GCA 90 bp | ATCCAGGCAGTGGGTGGGACTGGGCAGAGGGAAGTCACAGGCTTCTaGACAGCTCCAGCAACAGTCTTGGGTCTCGGAGGCACCTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: IQAVGGTGQREVTGF*TAPATVLGLGGTLF Trigger: AAACAAGGTGCCTCCGAGACCCAAGACTGTTGCTGGAGCTGTGCAGAAGCCTGTGACTTCCCTCTGCCCAGTCCCACCCACTGCCTGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| 3UTR CAA 90 bp | GGCTTCTGCACAGCTCCAGCAACAGTCTTGGGTCTCGGAGGCACCTaGTTTCCTGCAAGGGGAGCTGCAGTCTGTGCAGCAGCCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: GFCTAPATVLGLGGT*FPARGAAVCAAALG Trigger: GCCCAGGGCTGCTGCACAGACTGCAGCTCCCCTTGCAGGAAACAAGGTGCCTCCGAGACCCAAGACTGTTGCTGGAGCTGTGCAGAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTTCTGCACAGCTCCAGCAACAGTCTTGGGTCTCGGAGGCACCTTGTTTCCTGGGAGCTGCAGTCTGTaGAGCAGCCCTGGGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: GFCTAPATVLGLGGTLFPGSCSL*SSPGPA Trigger: TGCTGGCCCAGGGCTGCTGCACAGACTGCAGCTCCC...AGGAAACAAGGTGCCTCCGAGACCCAAGACTGTTGCTGGAGCTGTGCAGAAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| 3UTR-3UTR GCA 90 bp | TCGAGGGGCCCAACCAGCTTCACTGAGATGAGGACAGCAGGCATCCAGGCAGTGTCCTGCAAGGGGAGCTaGAGTCTGTGCAGCAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: SRGPTSFTEMRTAGIQAVSCKGS*SLCSSP Trigger: AGGGCTGCTGCACAGACTGCAGCTCCCCTTGCAGGA...CACTGCCTGGATGCCTGCTGTCCTCATCTCAGTGAAGCTGGTTGGGCCCCTCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| 3UTR CAA 90 bp | GGGCAGAGGGAAGTCACAGGCTTCTGCACAGCTCCAGCAACAGTCTaGGGTCTCGGAGGCACCTTGTTTCCTGCAAGGGGAGCTGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: GQREVTGFCTAPATV*GLGGTLFPARGAAV Trigger: GACTGCAGCTCCCCTTGCAGGAAACAAGGTGCCTCCGAGACCCAAGACTGTTGCTGGAGCTGTGCAGAAGCCTGTGACTTCCCTCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| 3UTR-3UTR CCA 90 bp | AACAACGTCCCCAGCCCCATCTTTCATCTGAGCTTGATCTCGAAACAGAGGCAGGAGGCTCTGGCAGTCTaGGAGCTGGCAGGCACAGGC | + |
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Preference number: 2 (lower is better) Translates to: NNVPSPIFHLSLISKQRQEALAV*ELAGTG Trigger: GCCTGTGCCTGCCAGCTCCCAGACTGCCAGAGCCTC...CTGCCTCTGTTTCGAGATCAAGCTCAGATGAAAGATGGGGCTGGGGACGTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCCATCTTTCATCTGAGCTTGATCTCGAAACAGAGGCAGTTGAGGCTCTGGGCACAGTCACACAGTaGGCAGCAGCCAGGGCATCG | + |
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Preference number: 2 (lower is better) Translates to: QPHLSSELDLETEAVEALGTVTQ*AAARAS Trigger: CGATGCCCTGGCTGCTGCCCACTGTGTGACTGTGCC...CAGAGCCTCAACTGCCTCTGTTTCGAGATCAAGCTCAGATGAAAGATGGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCCCCATCTTTCATCTGAGCTTGATCTCGAAACAGAGGCAGTTGAGGCTCAGGCACCTTGTTTCCTaGAAGGGGAGCTGCAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: PSPIFHLSLISKQRQLRLRHLVS*KGSCSL Trigger: CAGACTGCAGCTCCCCTTGCAGGAAACAAGGTGCCT...GAGCCTCAACTGCCTCTGTTTCGAGATCAAGCTCAGATGAAAGATGGGGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| 3UTR TCA 72 bp | CCAGGGCATCGAGGGGCCCAACCAGCTTCACTGAGATaGGGACAGCAGGCATCCAGGCAGTGGGTGGGACTG | + |
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Preference number: 3 (lower is better) Translates to: PGHRGAQPASLR*GQQASRQWVGL Trigger: CAGTCCCACCCACTGCCTGGATGCCTGCTGTCCTCATCTCAGTGAAGCTGGTTGGGCCCCTCGATGCCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| 3UTR TCA 72 bp | AGCAGCCAGGGCATCGAGGGGCCCAACCAGCTTCACTaGGATGAGGACAGCAGGCATCCAGGCAGTGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: SSQGIEGPNQLH*DEDSRHPGSGW Trigger: CCACCCACTGCCTGGATGCCTGCTGTCCTCATCTCAGTGAAGCTGGTTGGGCCCCTCGATGCCCTGGCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| 3UTR GCA 72 bp | GTGGGTGGGACTGGGCAGAGGGAAGTCACAGGCTTCTaGACAGCTCCAGCAACAGTCTTGGGTCTCGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: VGGTGQREVTGF*TAPATVLGLGG Trigger: GCCTCCGAGACCCAAGACTGTTGCTGGAGCTGTGCAGAAGCCTGTGACTTCCCTCTGCCCAGTCCCACCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| 3UTR GCA 72 bp | AGCAACAGTCTTGGGTCTCGGAGGCACCTTGTTTCCTaGAAGGGGAGCTGCAGTCTGTGCAGCAGCCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: SNSLGSRRHLVS*KGSCSLCSSPG Trigger: CCCAGGGCTGCTGCACAGACTGCAGCTCCCCTTGCAGGAAACAAGGTGCCTCCGAGACCCAAGACTGTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| CDS-3UTR GCA 90 bp | AGCTCCAGTAATGATGTCCTGAGGATCATAGAGGGGGCCCTGGGGACTGGCCACGGGAGCTGCAGTCTGTaGAGCAGCCCTGGGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SSSNDVLRIIEGALGTGHGSCSL*SSPGPA Trigger: TGCTGGCCCAGGGCTGCTGCACAGACTGCAGCTCCC...GTGGCCAGTCCCCAGGGCCCCCTCTATGATCCTCAGGACATCATTACTGGAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207534.3 |
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| CDS-3UTR CCA 90 bp | AGCTCCAGTAATGATGTCCTGAGGATCATAGAGGGGGCCCTGGGGACTGGCCACGATGGAAGCCGGGGCTaGATTCCACGGGCCAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: SSSNDVLRIIEGALGTGHDGSRG*IPRARG Trigger: TCCCCTGGCCCGTGGAATCCAGCCCCGGCTTCCATC...GTGGCCAGTCCCCAGGGCCCCCTCTATGATCCTCAGGACATCATTACTGGAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000153686.2 ENSMUST00000207534.3 |
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| CDS-3UTR CCA 90 bp | AGCTCCAGTAATGATGTCCTGAGGATCATAGAGGGGGCCCTGGGGACTGGCCACGAGGCTCTGGCAGTCTaGGAGCTGGCAGGCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: SSSNDVLRIIEGALGTGHEALAV*ELAGTG Trigger: GCCTGTGCCTGCCAGCTCCCAGACTGCCAGAGCCTC...GTGGCCAGTCCCCAGGGCCCCCTCTATGATCCTCAGGACATCATTACTGGAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207534.3 |
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| CDS-3UTR CCA 90 bp | AGCTCCAGTAATGATGTCCTGAGGATCATAGAGGGGGCCCTGGGGACTGGCCACGGCACAGTCACACAGTaGGCAGCAGCCAGGGCATCG | + |
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Preference number: 4 (lower is better) Translates to: SSSNDVLRIIEGALGTGHGTVTQ*AAARAS Trigger: CGATGCCCTGGCTGCTGCCCACTGTGTGACTGTGCC...GTGGCCAGTCCCCAGGGCCCCCTCTATGATCCTCAGGACATCATTACTGGAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207534.3 |
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| CDS-3UTR GCA 90 bp | TCCAGTAATGATGTCCTGAGGATCATAGAGGGGGCCCTGGGGACTGGCCACTCCTCCTGCAAGGGGAGCTaGAGTCTGTGCAGCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SSNDVLRIIEGALGTGHSSCKGS*SLCSSP Trigger: AGGGCTGCTGCACAGACTGCAGCTCCCCTTGCAGGA...GGAGTGGCCAGTCCCCAGGGCCCCCTCTATGATCCTCAGGACATCATTACTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207534.3 |
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| CDS-3UTR CCA 90 bp | AGCTCCAGTAATGATGTCCTGAGGATCATAGAGGGGGCCCTGGGGACTGGCCACTCTGTGCAGCAGCCCTaGGCCAGCAGACAGTGCCTA | + |
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Preference number: 4 (lower is better) Translates to: SSSNDVLRIIEGALGTGHSVQQP*ASRQCL Trigger: TAGGCACTGTCTGCTGGCCCAGGGCTGCTGCACAGA...GTGGCCAGTCCCCAGGGCCCCCTCTATGATCCTCAGGACATCATTACTGGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207534.3 |
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| CDS-3UTR CCA 90 bp | AGCTCCAGTAATGATGTCCTGAGGATCATAGAGGGGGCCCTGGGGACTGGCCACTGGCAGTCTGGGAGCTaGCAGGCACAGGCACAGTCA | + |
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Preference number: 4 (lower is better) Translates to: SSSNDVLRIIEGALGTGHWQSGS*QAQAQS Trigger: TGACTGTGCCTGTGCCTGCCAGCTCCCAGACTGCCA...GTGGCCAGTCCCCAGGGCCCCCTCTATGATCCTCAGGACATCATTACTGGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207534.3 |
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| CDS-3UTR CCA 90 bp | TCCAGTAATGATGTCCTGAGGATCATAGAGGGGGCCCTGGGGACTGGCCACTCCAGGCAGTTGAGGCTCTaGCAGTCTGGGAGCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SSNDVLRIIEGALGTGHSRQLRL*QSGSWQ Trigger: CTGCCAGCTCCCAGACTGCCAGAGCCTCAACTGCCT...GGAGTGGCCAGTCCCCAGGGCCCCCTCTATGATCCTCAGGACATCATTACTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207534.3 |
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| CDS-3UTR TCA 90 bp | CCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCATTGGCATTTTCCATaGTGGCCAGGGCCGAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: PHTRAAARVMGKSLKTPLHWHFP*WPGPRE Trigger: CTCCCTCGGCCCTGGCCATCATGGAAAATGCCAATG...AAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR TCA 90 bp | ACCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTCATTGGCATTTTCCATaGTGGCCAGGGCCGAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: TAHEGSSKSDGKEPEDPSHWHFP*WPGPRE Trigger: CTCCCTCGGCCCTGGCCATCATGGAAAATGCCAATG...AGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR GCA 90 bp | TCACAGACAACACCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGATGGGTGGGGCATGGTaGCGGTGGCAGTGCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: SQTTPHTRAAARVMGKSLMGGAW*RWQCFP Trigger: AGGAAAGCACTGCCACCGGCACCATGCCCCACCCAT...CAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGGTGTTGTCTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087566.11 |
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| CDS-3UTR GCA 90 bp | TCCAGTAATGATGTCCTGAGGATCATAGAGGGGGCCCTGGGGACTGGCCACTCCGCAGGGGTGGGAAGTTaGAAGGAAGGGCCGATGGAA | + |
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Preference number: 4 (lower is better) Translates to: SSNDVLRIIEGALGTGHSAGVGS*KEGPME Trigger: TTCCATCGGCCCTTCCTTGCAACTTCCCACCCCTGC...GGAGTGGCCAGTCCCCAGGGCCCCCTCTATGATCCTCAGGACATCATTACTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000153686.2 ENSMUST00000207534.3 |
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| CDS-3UTR GCA 90 bp | TCCAGTAATGATGTCCTGAGGATCATAGAGGGGGCCCTGGGGACTGGCCACTCCTGGGCCAGCAGACAGTaGCTAGTCAGCAGCACTAGG | + |
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Preference number: 4 (lower is better) Translates to: SSNDVLRIIEGALGTGHSWASRQ*LVSSTR Trigger: CCTAGTGCTGCTGACTAGGCACTGTCTGCTGGCCCA...GGAGTGGCCAGTCCCCAGGGCCCCCTCTATGATCCTCAGGACATCATTACTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207534.3 |
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| CDS-3UTR TCA 90 bp | CCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTTGCGACGAAGTGCTGTaGCCGTTGCCATGGCAATCT | + |
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Preference number: 4 (lower is better) Translates to: PHTRAAARVMGKSLKTPLCDEVL*PLPWQS Trigger: AGATTGCCATGGCAACGGTCACAGCACTTCGTCGCA...AAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR TCA 90 bp | TCACAGGCTTCTGCACAGCTCCAGCAACAGTCTTGGGTCTCGGAGGCACCTTGTGCACAGAGGAAGCCGTaGGCAGGAGATGAGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: SQASAQLQQQSWVSEAPCAQRKP*AGDEMP Trigger: TGGCATCTCATCTCCTGCTCACGGCTTCCTCTGTGC...ACAAGGTGCCTCCGAGACCCAAGACTGTTGCTGGAGCTGTGCAGAAGCCTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| CDS-3UTR TCA 90 bp | AGCTCCAGTAATGATGTCCTGAGGATCATAGAGGGGGCCCTGGGGACTGGCCACCCCAACCAGCTTCACTaGGATGAGGACAGCAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: SSSNDVLRIIEGALGTGHPNQLH*DEDSRH Trigger: ATGCCTGCTGTCCTCATCTCAGTGAAGCTGGTTGGG...GTGGCCAGTCCCCAGGGCCCCCTCTATGATCCTCAGGACATCATTACTGGAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207534.3 |
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| CDS-3UTR GCA 90 bp | CAGACAACACCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGGAGAGATTCACTGGCTaGGGCTCCAGACTGGCCACT | + |
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Preference number: 4 (lower is better) Translates to: QTTPHTRAAARVMGKSLKERFTG*GSRLAT Trigger: AGTGGCCAGTCTGGAGCCGCAGCCAGTGAATCTCTC...CTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGGTGTTGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR GCA 90 bp | TCACAGACAACACCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGGAGAGATTCACTGGCTaGGGCTCCAGACTGGCCACT | + |
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Preference number: 4 (lower is better) Translates to: SQTTPHTRAAARVMGKSLERFTG*GSRLAT Trigger: AGTGGCCAGTCTGGAGCCGCAGCCAGTGAATCTCTC...CAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGGTGTTGTCTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR GCA 90 bp | TCCAGTAATGATGTCCTGAGGATCATAGAGGGGGCCCTGGGGACTGGCCACTCCAGGCACCTTGTTTCCTaGAAGGGGAGCTGCAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SSNDVLRIIEGALGTGHSRHLVS*KGSCSL Trigger: CAGACTGCAGCTCCCCTTGCAGGAAACAAGGTGCCT...GGAGTGGCCAGTCCCCAGGGCCCCCTCTATGATCCTCAGGACATCATTACTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207534.3 |
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| CDS-3UTR CCA 90 bp | TCACAGACAACACCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGTGGACTGCAGGCGCTTaGCAATGCTTCCGGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: SQTTPHTRAAARVMGKSLWTAGA*QCFRWT Trigger: AGTCCACCGGAAGCATTGCCAAGCGCCTGCAGTCCA...CAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGGTGTTGTCTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR CCA 90 bp | GAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAATAGCACTCCGGGGTCAGTGCTaGGTATGGGTGGGGCATGGT | + |
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Preference number: 4 (lower is better) Translates to: EGSSKSDGKEPEDPSSIALRGQC*VWVGHG Trigger: ACCATGCCCCACCCATACCCAGCACTGACCCCGGAG...TGCTATTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087566.11 |
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| CDS-3UTR CCA 90 bp | AGCTCCAGTAATGATGTCCTGAGGATCATAGAGGGGGCCCTGGGGACTGGCCACCTCCAGCAACAGTCTTaGGTCTCGGAGGCACCTTGT | + |
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Preference number: 4 (lower is better) Translates to: SSSNDVLRIIEGALGTGHLQQQS*VSEAPC Trigger: ACAAGGTGCCTCCGAGACCCAAGACTGTTGCTGGAG...GTGGCCAGTCCCCAGGGCCCCCTCTATGATCCTCAGGACATCATTACTGGAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207534.3 |
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| 3UTR CAA 72 bp | ACAGCTCCAGCAACAGTCTTGGGTCTCGGAGGCACCTaGTTTCCTGCAAGGGGAGCTGCAGTCTGTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: TAPATVLGLGGT*FPARGAAVCAA Trigger: TGCTGCACAGACTGCAGCTCCCCTTGCAGGAAACAAGGTGCCTCCGAGACCCAAGACTGTTGCTGGAGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| CDS-3UTR GCA 90 bp | ACAGACAACACCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGCAGGCGCTTGGCAATaGTTCCGGTGGACTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: TDNTAHEGSSKSDGKEPEAGAWQ*FRWTHL Trigger: CAGATGAGTCCACCGGAAGCATTGCCAAGCGCCTGC...TTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGGTGTTGTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR GCA 90 bp | ACAGACAACACCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAATTCACACGGTCGTCTaGAGTCAGCAGCAGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: TDNTAHEGSSKSDGKEPEIHTVV*SQQQLA Trigger: CGCCAGCTGCTGCTGACTGCAGACGACCGTGTGAAT...TTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGGTGTTGTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR CCA 90 bp | CACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAATGGACTGCAGGCGCTTaGCAATGCTTCCGGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: HTRAAARVMGKSLKTPLQWTAGA*QCFRWT Trigger: AGTCCACCGGAAGCATTGCCAAGCGCCTGCAGTCCA...TTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR CCA 90 bp | CATCTTTCATCTGAGCTTGATCTCGAAACAGAGGCAGTTGAGGCTCTGGCAGTCGGGCCAGGGGAGGCCTaGAGAAGCACAGAGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: HLSSELDLETEAVEALAVGPGEA*RSTEEA Trigger: GGCTTCCTCTGTGCTTCTCCAGGCCTCCCCTGGCCC...GACTGCCAGAGCCTCAACTGCCTCTGTTTCGAGATCAAGCTCAGATGAAAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| CDS-3UTR TCA 90 bp | ACAGACAACACCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAATGCGACGAAGTGCTGTaGCCGTTGCCATGGCAATCT | + |
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Preference number: 4 (lower is better) Translates to: TDNTAHEGSSKSDGKEPECDEVL*PLPWQS Trigger: AGATTGCCATGGCAACGGTCACAGCACTTCGTCGCA...TTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGGTGTTGTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR GCA 90 bp | GAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAATAGCAGCAGGCGCTTGGCAATaGTTCCGGTGGACTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: EGSSKSDGKEPEDPSSIAAGAWQ*FRWTHL Trigger: CAGATGAGTCCACCGGAAGCATTGCCAAGCGCCTGC...TGCTATTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR GCA 90 bp | CACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAATAATTCACACGGTCGTCTaGAGTCAGCAGCAGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: HEGSSKSDGKEPEDPSSIIHTVV*SQQQLA Trigger: CGCCAGCTGCTGCTGACTGCAGACGACCGTGTGAAT...TATTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR GCA 90 bp | GAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAATAGCAGAGAGATTCACTGGCTaGGGCTCCAGACTGGCCACT | + |
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Preference number: 4 (lower is better) Translates to: EGSSKSDGKEPEDPSSIAERFTG*GSRLAT Trigger: AGTGGCCAGTCTGGAGCCGCAGCCAGTGAATCTCTC...TGCTATTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR GCA 90 bp | GAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAATAGCAAGCTCAGAGTGGGGTTaGTCACTGGCAACTGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: EGSSKSDGKEPEDPSSIASSEWG*SLATGG Trigger: TCCCCCAGTTGCCAGTGAGCAACCCCACTCTGAGCT...TGCTATTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087566.11 |
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| CDS-3UTR GCA 90 bp | TCACAGACAACACCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGCCTAACTCTGTCTGTTaGTGGGTGTTGCCCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: SQTTPHTRAAARVMGKSLPNSVC*WVLPSS Trigger: TGAGCTGGGCAACACCCAGCAACAGACAGAGTTAGG...CAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGGTGTTGTCTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087566.11 |
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| CDS-3UTR CCA 90 bp | ACAGACAACACCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGCTGCGGCTCCAGACTaGCCACTTGGGGTATACTTT | + |
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Preference number: 4 (lower is better) Translates to: TDNTAHEGSSKSDGKEPEAAAPD*PLGVYF Trigger: AAAGTATACCCCAAGTGGCCAGTCTGGAGCCGCAGC...TTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGGTGTTGTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR TCA 90 bp | AGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAATAGCAAGTGGGCATTGGCATTTTCCATaGTGGCCAGGGCCGAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SSKSDGKEPEDPSSIASGHWHFP*WPGPRE Trigger: CTCCCTCGGCCCTGGCCATCATGGAAAATGCCAATG...CCCACTTGCTATTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR GCA 90 bp | AGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAATAGCAAGTGGGATTCACACGGTCGTCTaGAGTCAGCAGCAGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: SSKSDGKEPEDPSSIASGIHTVV*SQQQLA Trigger: CGCCAGCTGCTGCTGACTGCAGACGACCGTGTGAAT...CCCACTTGCTATTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR GCA 90 bp | CCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTTGGGCTTCAGCAATGTaGCTTCCAGATAGACATGGT | + |
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Preference number: 4 (lower is better) Translates to: PHTRAAARVMGKSLKTPLWASAM*LPDRHG Trigger: ACCATGTCTATCTGGAAGGCACATTGCTGAAGCCCA...AAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR GCA 90 bp | ACCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTGGGCTTCAGCAATGTaGCTTCCAGATAGACATGGT | + |
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Preference number: 4 (lower is better) Translates to: TAHEGSSKSDGKEPEDPSWASAM*LPDRHG Trigger: ACCATGTCTATCTGGAAGGCACATTGCTGAAGCCCA...AGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR GCA 90 bp | AACAACGTCCCCAGCCCCATCTTTCATCTGAGCTTGATCTCGAAACAGAGGCAGGCAGGGGTGGGAAGTTaGAAGGAAGGGCCGATGGAA | + |
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Preference number: 4 (lower is better) Translates to: NNVPSPIFHLSLISKQRQAGVGS*KEGPME Trigger: TTCCATCGGCCCTTCCTTGCAACTTCCCACCCCTGC...CTGCCTCTGTTTCGAGATCAAGCTCAGATGAAAGATGGGGCTGGGGACGTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| CDS-3UTR CCA 90 bp | CCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTTCATTGGAAAATTTCTaGGTGCAAGCATGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PHTRAAARVMGKSLKTPLSLENF*VQAWPG Trigger: CCCTGGCCATGCTTGCACCCAGAAATTTTCCAATGA...AAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR CCA 90 bp | ACCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCATTGGAAAATTTCTaGGTGCAAGCATGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: TAHEGSSKSDGKEPEDPSSLENF*VQAWPG Trigger: CCCTGGCCATGCTTGCACCCAGAAATTTTCCAATGA...AGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR CCA 90 bp | ACCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCCAGACTGGCCACTTaGGGTATACTTTCCTTGACA | + |
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Preference number: 4 (lower is better) Translates to: TAHEGSSKSDGKEPEDPSSRLAT*GILSLT Trigger: TGTCAAGGAAAGTATACCCCAAGTGGCCAGTCTGGA...AGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR CCA 90 bp | GAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAATAGCAGCTGCGGCTCCAGACTaGCCACTTGGGGTATACTTT | + |
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Preference number: 4 (lower is better) Translates to: EGSSKSDGKEPEDPSSIAAAAPD*PLGVYF Trigger: AAAGTATACCCCAAGTGGCCAGTCTGGAGCCGCAGC...TGCTATTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR CCA 90 bp | CACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAATAGCTGCGGCTCCAGACTaGCCACTTGGGGTATACTTT | + |
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Preference number: 4 (lower is better) Translates to: HEGSSKSDGKEPEDPSSIAAAPD*PLGVYF Trigger: AAAGTATACCCCAAGTGGCCAGTCTGGAGCCGCAGC...TATTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR CCA 90 bp | CACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAAAACTCTGTCTGTTGCTaGGTGTTGCCCAGCTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: HTRAAARVMGKSLKTPLQNSVCC*VLPSSE Trigger: CTCTGAGCTGGGCAACACCCAGCAACAGACAGAGTT...TTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087566.11 |
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| 3UTR CAA 72 bp | ATCTTTCATCTGAGCTTGATCTCGAAACAGAGGCAGTaGAGGCTCTGGCAGTCTGGGAGCTGGCAGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: IFHLSLISKQRQ*RLWQSGSWQAQ Trigger: CTGTGCCTGCCAGCTCCCAGACTGCCAGAGCCTCAACTGCCTCTGTTTCGAGATCAAGCTCAGATGAAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| CDS-3UTR CCA 90 bp | ACAGACAACACCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAATCCAGACTGGCCACTTaGGGTATACTTTCCTTGACA | + |
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Preference number: 4 (lower is better) Translates to: TDNTAHEGSSKSDGKEPESRLAT*GILSLT Trigger: TGTCAAGGAAAGTATACCCCAAGTGGCCAGTCTGGA...TTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGGTGTTGTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR CCA 90 bp | GAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAATAGCATTGCTCACTGGCAACTaGGGGAAAGGAAAAAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: EGSSKSDGKEPEDPSSIALLTGN*GKGKSQ Trigger: CTGGCTTTTTCCTTTCCCCCAGTTGCCAGTGAGCAA...TGCTATTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087566.11 |
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| CDS-3UTR CCA 90 bp | AGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAATAGCAAGTGGGAGTGGGGTTGCTCACTaGCAACTGGGGGAAAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SSKSDGKEPEDPSSIASGSGVAH*QLGERK Trigger: TTTCCTTTCCCCCAGTTGCCAGTGAGCAACCCCACT...CCCACTTGCTATTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087566.11 |
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| CDS-3UTR CCA 90 bp | GAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAATAGCATCATTGGAAAATTTCTaGGTGCAAGCATGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: EGSSKSDGKEPEDPSSIASLENF*VQAWPG Trigger: CCCTGGCCATGCTTGCACCCAGAAATTTTCCAATGA...TGCTATTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR CCA 90 bp | CACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAATATCCAGACTGGCCACTTaGGGTATACTTTCCTTGACA | + |
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Preference number: 4 (lower is better) Translates to: HEGSSKSDGKEPEDPSSISRLAT*GILSLT Trigger: TGTCAAGGAAAGTATACCCCAAGTGGCCAGTCTGGA...TATTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR CAA 90 bp | TCGAGGGGCCCAACCAGCTTCACTGAGATGAGGACAGCAGGCATCCAGGCAGTGAGCAGGGGTGGGAAGTaGCAAGGAAGGGCCGATGGA | + |
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Preference number: 5 (lower is better) Translates to: SRGPTSFTEMRTAGIQAVSRGGK*QGRADG Trigger: TCCATCGGCCCTTCCTTGCAACTTCCCACCCCTGCT...CACTGCCTGGATGCCTGCTGTCCTCATCTCAGTGAAGCTGGTTGGGCCCCTCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| CDS-3UTR CAA 90 bp | CCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTGTAGTTGTCTCGCCATaGGTTCCTGCCAGGGGCACC | + |
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Preference number: 5 (lower is better) Translates to: PHTRAAARVMGKSLKTPLVVVSP*VPARGT Trigger: GGTGCCCCTGGCAGGAACCAATGGCGAGACAACTAC...AAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR CAA 90 bp | AGCTCCAGTAATGATGTCCTGAGGATCATAGAGGGGGCCCTGGGGACTGGCCACAGCAGGGGTGGGAAGTaGCAAGGAAGGGCCGATGGA | + |
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Preference number: 5 (lower is better) Translates to: SSSNDVLRIIEGALGTGHSRGGK*QGRADG Trigger: TCCATCGGCCCTTCCTTGCAACTTCCCACCCCTGCT...GTGGCCAGTCCCCAGGGCCCCCTCTATGATCCTCAGGACATCATTACTGGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000153686.2 ENSMUST00000207534.3 |
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| CDS-3UTR CAA 90 bp | TCCAGTAATGATGTCCTGAGGATCATAGAGGGGGCCCTGGGGACTGGCCACTCCTCGAAACAGAGGCAGTaGAGGCTCTGGCAGTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: SSNDVLRIIEGALGTGHSSKQRQ*RLWQSG Trigger: CCCAGACTGCCAGAGCCTCAACTGCCTCTGTTTCGA...GGAGTGGCCAGTCCCCAGGGCCCCCTCTATGATCCTCAGGACATCATTACTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207534.3 |
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| CDS GCA 90 bp | GGCATGGTGCCGGTGGCAGTGCTTTCCTTTCCTAACTCTGTCTGTTaGTGGGTGTTGCCCAGCTCAGAGTGGGGTTGCTCACTGGCAACT | + |
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Preference number: 5 (lower is better) Translates to: GMVPVAVLSFPNSVC*WVLPSSEWGCSLAT Trigger: AGTTGCCAGTGAGCAACCCCACTCTGAGCTGGGCAACACCCAGCAACAGACAGAGTTAGGAAAGGAAAGCACTGCCACCGGCACCATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087566.11 ENSMUST00000133514.8 ENSMUST00000205336.2 |
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| CDS-3UTR CAA 90 bp | ACAGACAACACCGCACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGTAGTTGTCTCGCCATaGGTTCCTGCCAGGGGCACC | + |
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Preference number: 5 (lower is better) Translates to: TDNTAHEGSSKSDGKEPEVVVSP*VPARGT Trigger: GGTGCCCCTGGCAGGAACCAATGGCGAGACAACTAC...TTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTGCGGTGTTGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR CAA 90 bp | CACACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAAGTAGTTGTCTCGCCATaGGTTCCTGCCAGGGGCACC | + |
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Preference number: 5 (lower is better) Translates to: HTRAAARVMGKSLKTPLQVVVSP*VPARGT Trigger: GGTGCCCCTGGCAGGAACCAATGGCGAGACAACTAC...TTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR CAA 90 bp | CACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAATAAGCACACAGCGCCACTaGGCAAAGTCGGCTCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: HEGSSKSDGKEPEDPSSISTQRH*AKSAPS Trigger: GGATGGAGCCGACTTTGCCAAGTGGCGCTGTGTGCT...TATTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR CAA 90 bp | CACGAGGGCAGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAATAGTCTGTTGCTGGGTGTaGCCCAGCTCAGAGTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: HEGSSKSDGKEPEDPSSIVCCWV*PSSEWG Trigger: ACCCCACTCTGAGCTGGGCAACACCCAGCAACAGAC...TATTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCTGCCCTCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087566.11 |
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| CDS CCA 90 bp | TCCTTTCCTAACTCTGTCTGTTGCTGGGTGTTGCCCAGCTCAGAGTaGGGTTGCTCACTGGCAACTGGGGGAAAGGAAAAAGCCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SFPNSVCCWVLPSSE*GCSLATGGKEKARA Trigger: GGCTCTGGCTTTTTCCTTTCCCCCAGTTGCCAGTGAGCAACCCCACTCTGAGCTGGGCAACACCCAGCAACAGACAGAGTTAGGAAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000087566.11 ENSMUST00000133514.8 ENSMUST00000205336.2 |
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| CDS-3UTR CAA 90 bp | AGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAATAGCAAGTGGGAGCACACAGCGCCACTaGGCAAAGTCGGCTCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SSKSDGKEPEDPSSIASGSTQRH*AKSAPS Trigger: GGATGGAGCCGACTTTGCCAAGTGGCGCTGTGTGCT...CCCACTTGCTATTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032934.12 ENSMUST00000087566.11 ENSMUST00000106348.8 |
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| CDS-3UTR CAA 90 bp | AGCAGCAAGAGTGATGGGAAAGAGCCTGAAGACCCCTCTTCAATAGCAAGTGGGGACAGGCGGGTCATGTaGAAGCTGGACCCATCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSKSDGKEPEDPSSIASGDRRVM*KLDPSG Trigger: GCCAGATGGGTCCAGCTTCAACATGACCCGCCTGTC...CCCACTTGCTATTGAAGAGGGGTCTTCAGGCTCTTTCCCATCACTCTTGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087566.11 |
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| CDS CCA 72 bp | GGGAAGTTGCAAGGAAGGGCCGATGGAAGCCGGGGCTaGATTCCACGGGCCAGGGGAGGCCTGGAGAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: GKLQGRADGSRG*IPRARGGLEKH Trigger: GTGCTTCTCCAGGCCTCCCCTGGCCCGTGGAATCCAGCCCCGGCTTCCATCGGCCCTTCCTTGCAACTTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153686.2 |
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| CDS CAA 90 bp | CAAATAGATGCCCACCGCGATGAAGACGATAGCAGGGGTGGGAAGTaGCAAGGAAGGGCCGATGGAAGCCGGGGCTGGATTCCACGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QIDAHRDEDDSRGGK*QGRADGSRGWIPRA Trigger: GGCCCGTGGAATCCAGCCCCGGCTTCCATCGGCCCTTCCTTGCAACTTCCCACCCCTGCTATCGTCTTCATCGCGGTGGGCATCTATTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000153686.2 ENSMUST00000207534.3 |
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| CDS CCA 72 bp | AACTCTGTCTGTTGCTGGGTGTTGCCCAGCTCAGAGTaGGGTTGCTCACTGGCAACTGGGGGAAAGGAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: NSVCCWVLPSSE*GCSLATGGKEK Trigger: TTTTTCCTTTCCCCCAGTTGCCAGTGAGCAACCCCACTCTGAGCTGGGCAACACCCAGCAACAGACAGAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087566.11 ENSMUST00000133514.8 ENSMUST00000205336.2 |
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| CDS CAA 72 bp | GTGCTTTCCTTTCCTAACTCTGTCTGTTGCTGGGTGTaGCCCAGCTCAGAGTGGGGTTGCTCACTGGCAACT | + |
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Preference number: 6 (lower is better) Translates to: VLSFPNSVCCWV*PSSEWGCSLAT Trigger: AGTTGCCAGTGAGCAACCCCACTCTGAGCTGGGCAACACCCAGCAACAGACAGAGTTAGGAAAGGAAAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087566.11 ENSMUST00000133514.8 ENSMUST00000205336.2 |
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