Pregenerated sensors for ALDH9A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026687Ensembl transcript IDs: ENSMUST00000028004.11
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGCTGGGACAACAGGTTACCTGGCTACCATCTGAAAGGCACTTGTaGACATTTTCAAACTGGGAAGGTGACTGTAAGACAGAGGACAAC | + |
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Preference number: 1 (lower is better) Translates to: GLGQQVTWLPSERHL*TFSNWEGDCKTEDN Trigger: GTTGTCCTCTGTCTTACAGTCACCTTCCCAGTTTGAAAATGTGCACAAGTGCCTTTCAGATGGTAGCCAGGTAACCTGTTGTCCCAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR CCA 90 bp | CTGCGTAAAATCCGACTCCACCAACTACCTGTCTCTCTAGCCAGGTaGTCCGGTTTCTCAAAGAAAGGACAGAAAAACACAGCGTTTGAG | + |
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Preference number: 1 (lower is better) Translates to: LRKIRLHQLPVSLAR*SGFSKKGQKNTAFE Trigger: CTCAAACGCTGTGTTTTTCTGTCCTTTCTTTGAGAAACCGGACCACCTGGCTAGAGAGACAGGTAGTTGGTGGAGTCGGATTTTACGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR-3UTR GCA 90 bp | ACCTGTCTCTGCCTCCCAAGTGCCGGGATTAAAGGCACATACCAGTACTGCCCAGAAGCTATTCAGTTATaGTGCCTGTCAAGGCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: TCLCLPSAGIKGTYQYCPEAIQL*CLSRQS Trigger: TGACTGCCTTGACAGGCAGCATAACTGAATAGCTTC...TGGGCAGTACTGGTATGTGCCTTTAATCCCGGCACTTGGGAGGCAGAGACAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR-3UTR TCA 90 bp | CGACTCCACCAACTACCTGTCTCTCTAGCCAGGTGGTCCGGTTTCTCAAAGAAATTATTGTGCAGTGTATaGTATGGGGAAGGGGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: RLHQLPVSLARWSGFSKKLLCSV*YGEGVG Trigger: ACCCACCCCTTCCCCATATCATACACTGCACAATAA...TTTCTTTGAGAAACCGGACCACCTGGCTAGAGAGACAGGTAGTTGGTGGAGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR-3UTR TCA 90 bp | ATTCACTCTGTAGACCAGGCTGGCTCTAAACTCAGACATCCACCTGTCTCTGCCAGAATGTATATGTACTaGTTCACCAGGAACCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: IHSVDQAGSKLRHPPVSARMYMY*FTRNPG Trigger: TCCTGGGTTCCTGGTGAATCAGTACATATACATTCT...GGCAGAGACAGGTGGATGTCTGAGTTTAGAGCCAGCCTGGTCTACAGAGTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR-3UTR GCA 90 bp | AGGTGGTCCGGTTTCTCAAAGAAAGGACAGAAAAACACAGCGTTTGAGAAAGATAGCAGAGCTGTGGCCTaGCTATGTCTGAAGAGTGCG | + |
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Preference number: 2 (lower is better) Translates to: RWSGFSKKGQKNTAFEKDSRAVA*LCLKSA Trigger: CGCACTCTTCAGACATAGGCAGGCCACAGCTCTGCT...ATCTTTCTCAAACGCTGTGTTTTTCTGTCCTTTCTTTGAGAAACCGGACCACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR-3UTR GCA 90 bp | GTTCTAGAGATAAACCTGAAGTCACTGGGTTTAAGTGATAAGACCTTACCCACTACATCCACCTGTCTCTaGCTCCCAAGTGCCGGGATT | + |
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Preference number: 2 (lower is better) Translates to: VLEINLKSLGLSDKTLPTTSTCL*LPSAGI Trigger: AATCCCGGCACTTGGGAGGCAGAGACAGGTGGATGT...AGTGGGTAAGGTCTTATCACTTAAACCCAGTGACTTCAGGTTTATCTCTAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR-3UTR GCA 90 bp | GAGATAAAGTGCTGTGGAAGACAGGATGAGTGTTTACTGAGGCAAGTCAGTTATCCTATGTCTGAAGAGTaGGCTTCTGGGGTCTACATA | + |
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Preference number: 2 (lower is better) Translates to: EIKCCGRQDECLLRQVSYPMSEE*ASGVYI Trigger: TATGTAGACCCCAGAAGCGCACTCTTCAGACATAGG...ATAACTGACTTGCCTCAGTAAACACTCATCCTGTCTTCCACAGCACTTTATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR-3UTR GCA 90 bp | ACTACCTGTCTCTCTAGCCAGGTGGTCCGGTTTCTCAAAGAAAGGACAGAAAAAAGCAAACTAGAAAGCTaGCATTGTTGGTGGGACAAA | + |
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Preference number: 2 (lower is better) Translates to: TTCLSSQVVRFLKERTEKSKLES*HCWWDK Trigger: TTTGTCCCACCAACAATGGCAGCTTTCTAGTTTGCT...TTTTTCTGTCCTTTCTTTGAGAAACCGGACCACCTGGCTAGAGAGACAGGTAGT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR-3UTR CCA 90 bp | GGAAGACAGGATGAGTGTTTACTGAGGCAAGTCAGTTATCTGCGTAAAATCCGATGCACATTTTCAAACTaGGAAGGTGACTGTAAGACA | + |
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Preference number: 2 (lower is better) Translates to: GRQDECLLRQVSYLRKIRCTFSN*EGDCKT Trigger: TGTCTTACAGTCACCTTCCCAGTTTGAAAATGTGCA...TCGGATTTTACGCAGATAACTGACTTGCCTCAGTAAACACTCATCCTGTCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR-3UTR GCA 90 bp | GTTCTAGAGATAAACCTGAAGTCACTGGGTTTAAGTGATAAGACCTTACCCACTTCTGAAAGGCACTTGTaGACATTTTCAAACTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: VLEINLKSLGLSDKTLPTSERHL*TFSNWE Trigger: TTCCCAGTTTGAAAATGTGCACAAGTGCCTTTCAGA...AGTGGGTAAGGTCTTATCACTTAAACCCAGTGACTTCAGGTTTATCTCTAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR GCA 72 bp | TTGGTGGGACAAATGTGTAGGAGCAGAGCTGTGGCCTaGCTATGTCTGAAGAGTGCGCTTCTGGGGTCTACA | + |
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Preference number: 3 (lower is better) Translates to: LVGQMCRSRAVA*LCLKSALLGST Trigger: TGTAGACCCCAGAAGCGCACTCTTCAGACATAGGCAGGCCACAGCTCTGCTCCTACACATTTGTCCCACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR TCA 72 bp | TCAGGGGCTGGGACAACAGGTTACCTGGCTACCATCTaGAAGGCACTTGTGCACATTTTCAAACTGGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: SGAGTTGYLATI*KALVHIFKLGR Trigger: CCTTCCCAGTTTGAAAATGTGCACAAGTGCCTTTCAGATGGTAGCCAGGTAACCTGTTGTCCCAGCCCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR TCA 72 bp | AAATGTGTAGGAGCAGAGCTGTGGCCTGCCTATGTCTaGAGAGTGCGCTTCTGGGGTCTACATATTTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: KCVGAELWPAYV*RVRFWGLHISQ Trigger: CTGAGAAATATGTAGACCCCAGAAGCGCACTCTTCAGACATAGGCAGGCCACAGCTCTGCTCCTACACATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR CCA 72 bp | ATCCGACTCCACCAACTACCTGTCTCTCTAGCCAGGTaGTCCGGTTTCTCAAAGAAAGGACAGAAAAACACA | + |
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Preference number: 3 (lower is better) Translates to: IRLHQLPVSLAR*SGFSKKGQKNT Trigger: TGTGTTTTTCTGTCCTTTCTTTGAGAAACCGGACCACCTGGCTAGAGAGACAGGTAGTTGGTGGAGTCGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR CCA 72 bp | CTACATATTTCTCAGGGGCTGGGACAACAGGTTACCTaGCTACCATCTGAAAGGCACTTGTGCACATTTTCA | + |
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Preference number: 3 (lower is better) Translates to: LHISQGLGQQVT*LPSERHLCTFS Trigger: TGAAAATGTGCACAAGTGCCTTTCAGATGGTAGCCAGGTAACCTGTTGTCCCAGCCCCTGAGAAATATGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR GCA 72 bp | CAACAGGTTACCTGGCTACCATCTGAAAGGCACTTGTaGACATTTTCAAACTGGGAAGGTGACTGTAAGACA | + |
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Preference number: 3 (lower is better) Translates to: QQVTWLPSERHL*TFSNWEGDCKT Trigger: TGTCTTACAGTCACCTTCCCAGTTTGAAAATGTGCACAAGTGCCTTTCAGATGGTAGCCAGGTAACCTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR CCA 72 bp | CTACCATCTGAAAGGCACTTGTGCACATTTTCAAACTaGGAAGGTGACTGTAAGACAGAGGACAACACTGAC | + |
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Preference number: 3 (lower is better) Translates to: LPSERHLCTFSN*EGDCKTEDNTD Trigger: GTCAGTGTTGTCCTCTGTCTTACAGTCACCTTCCCAGTTTGAAAATGTGCACAAGTGCCTTTCAGATGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR-3UTR CAA 90 bp | TCCGGTTTCTCAAAGAAAGGACAGAAAAACACAGCGTTTGAGAAAGATTTTATTCCATCTGAAAGGCACTaGTGCACATTTTCAAACTGG | + |
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Preference number: 3 (lower is better) Translates to: SGFSKKGQKNTAFEKDFIPSERH*CTFSNW Trigger: CCAGTTTGAAAATGTGCACAAGTGCCTTTCAGATGG...AATAAAATCTTTCTCAAACGCTGTGTTTTTCTGTCCTTTCTTTGAGAAACCGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR TCA 72 bp | CGGTTTCTCAAAGAAAGGACAGAAAAACACAGCGTTTaGGAAAGATTTTATTATTGTGCAGTGTATGATATG | + |
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Preference number: 3 (lower is better) Translates to: RFLKERTEKHSV*ERFYYCAVYDM Trigger: CATATCATACACTGCACAATAATAAAATCTTTCTCAAACGCTGTGTTTTTCTGTCCTTTCTTTGAGAAACCG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR TCA 90 bp | ATTCACTCTGTAGACCAGGCTGGCTCTAAACTCAGACATCCACCTGTCTCTGCCCCCCGCCGCGGTAGTTaGGCGGCTGCGACACGACGA | + |
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Preference number: 4 (lower is better) Translates to: IHSVDQAGSKLRHPPVSAPRRGS*AAATRR Trigger: TCGTCGTGTCGCAGCCGCTCAACTACCGCGGCGGGG...GGCAGAGACAGGTGGATGTCTGAGTTTAGAGCCAGCCTGGTCTACAGAGTGAAT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR GCA 90 bp | CAAATGTGTAGGAGCAGAGCTGTGGCCTGCCTATGTCTGAAGAGTGCGCTTCTGCTGCAGCCCGGTGAATaGGGAGGAGCGAGGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QMCRSRAVACLCLKSALLLQPGE*GGARSA Trigger: TGCTGACCTCGCTCCTCCGCATTCACCGGGCTGCAG...CAGAAGCGCACTCTTCAGACATAGGCAGGCCACAGCTCTGCTCCTACACATTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR CCA 90 bp | GAGTGCGCTTCTGGGGTCTACATATTTCTCAGGGGCTGGGACAACAGGTTACCTACAGAAACTGGCCTGTaGCAGCCCCACCTTGCACCA | + |
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Preference number: 4 (lower is better) Translates to: ECASGVYIFLRGWDNRLPTETGL*QPHLAP Trigger: TGGTGCAAGGTGGGGCTGCCACAGGCCAGTTTCTGT...AGGTAACCTGTTGTCCCAGCCCCTGAGAAATATGTAGACCCCAGAAGCGCACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR CCA 90 bp | ATTCACTCTGTAGACCAGGCTGGCTCTAAACTCAGACATCCACCTGTCTCTGCCCTGAACACGCGAAAGTaGCAATCACTCGGCCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: IHSVDQAGSKLRHPPVSALNTRK*QSLGRW Trigger: CCACCGGCCGAGTGATTGCCACTTTCGCGTGTTCAG...GGCAGAGACAGGTGGATGTCTGAGTTTAGAGCCAGCCTGGTCTACAGAGTGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR GCA 90 bp | GCTTTAAAGCAAACTAGAAAGCTGCCATTGTTGGTGGGACAAATGTGTAGGAGCCATGGCGGCGACTGCTaGAGCCCGGTGAATGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: ALKQTRKLPLLVGQMCRSHGGDC*SPVNAE Trigger: CTCCGCATTCACCGGGCTGCAGCAGTCGCCGCCATG...GCTCCTACACATTTGTCCCACCAACAATGGCAGCTTTCTAGTTTGCTTTAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR CCA 90 bp | ACTGTAAGACAGAGGACAACACTGACCCGTTATCACACTAATGACCCAAAGCCTGCCGAAGGACCCTCCTaGGAGCTGAATGTGCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: TVRQRTTLTRYHTNDPKPAEGPS*ELNVLA Trigger: GGCGAGCACATTCAGCTCCCAGGAGGGTCCTTCGGC...AGGCTTTGGGTCATTAGTGTGATAACGGGTCAGTGTTGTCCTCTGTCTTACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR CCA 90 bp | CGACTCCACCAACTACCTGTCTCTCTAGCCAGGTGGTCCGGTTTCTCAAAGAAATGGGGCGTTGATGAGTaGGCCCATCCTCGTATCTTC | + |
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Preference number: 4 (lower is better) Translates to: RLHQLPVSLARWSGFSKKWGVDE*AHPRIF Trigger: GAAGATACGAGGATGGGCCCACTCATCAACGCCCCA...TTTCTTTGAGAAACCGGACCACCTGGCTAGAGAGACAGGTAGTTGGTGGAGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR CCA 90 bp | CTATTCAGTTATGCTGCCTGTCAAGGCAGTCAACTCATTCCACAGCTTGGCTACCAATCACTCGGCCGGTaGCTGGCTCGAACGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LFSYAACQGSQLIPQLGYQSLGR*LARTLS Trigger: AGAAAGCGTTCGAGCCAGCCACCGGCCGAGTGATTG...GTAGCCAAGCTGTGGAATGAGTTGACTGCCTTGACAGGCAGCATAACTGAATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR TCA 90 bp | ACTACCTGTCTCTCTAGCCAGGTGGTCCGGTTTCTCAAAGAAAGGACAGAAAAATCTGGATGTCCCTGGTaGAGACCCCAGCTGCTAGTC | + |
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Preference number: 4 (lower is better) Translates to: TTCLSSQVVRFLKERTEKSGCPW*RPQLLV Trigger: GACTAGCAGCTGGGGTCTTCACCAGGGACATCCAGA...TTTTTCTGTCCTTTCTTTGAGAAACCGGACCACCTGGCTAGAGAGACAGGTAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR TCA 90 bp | ACTGTAAGACAGAGGACAACACTGACCCGTTATCACACTAATGACCCAAAGCCTTGGGCACACTTCCGGTaGAGGAGATTTTGGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: TVRQRTTLTRYHTNDPKPWAHFR*RRFWPP Trigger: AGGTGGCCAAAATCTCCTTCACCGGAAGTGTGCCCA...AGGCTTTGGGTCATTAGTGTGATAACGGGTCAGTGTTGTCCTCTGTCTTACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR TCA 90 bp | ATTCACTCTGTAGACCAGGCTGGCTCTAAACTCAGACATCCACCTGTCTCTGCCCTCTCTGCCAAATCCTaGCTTCTTGTAGCCACCAAA | + |
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Preference number: 4 (lower is better) Translates to: IHSVDQAGSKLRHPPVSALSAKS*LLVATK Trigger: TTTGGTGGCTACAAGAAGTCAGGATTTGGCAGAGAG...GGCAGAGACAGGTGGATGTCTGAGTTTAGAGCCAGCCTGGTCTACAGAGTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR GCA 90 bp | AGGTGGTCCGGTTTCTCAAAGAAAGGACAGAAAAACACAGCGTTTGAGAAAGATGCGACACGACGAAGGTaGCAGTACTCATGGCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: RWSGFSKKGQKNTAFEKDATRRR*QYSWRR Trigger: TCGCCGCCATGAGTACTGGCACCTTCGTCGTGTCGC...ATCTTTCTCAAACGCTGTGTTTTTCTGTCCTTTCTTTGAGAAACCGGACCACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR CCA 90 bp | GCTTTAAAGCAAACTAGAAAGCTGCCATTGTTGGTGGGACAAATGTGTAGGAGCGAGGCGCACCCGCTTTaGTGTAGATCTCAGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: ALKQTRKLPLLVGQMCRSEAHPL*CRSQPG Trigger: TCCTGGCTGAGATCTACACCAAAGCGGGTGCGCCTC...GCTCCTACACATTTGTCCCACCAACAATGGCAGCTTTCTAGTTTGCTTTAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR CAA 72 bp | AGGCCTGCTTTAAAGCAAACTAGAAAGCTGCCATTGTaGGTGGGACAAATGTGTAGGAGCAGAGCTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: RPALKQTRKLPL*VGQMCRSRAVA Trigger: GGCCACAGCTCTGCTCCTACACATTTGTCCCACCAACAATGGCAGCTTTCTAGTTTGCTTTAAAGCAGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| 3UTR CAA 72 bp | GGAAGGCCTGCTTTAAAGCAAACTAGAAAGCTGCCATaGTTGGTGGGACAAATGTGTAGGAGCAGAGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: GRPALKQTRKLP*LVGQMCRSRAV Trigger: CACAGCTCTGCTCCTACACATTTGTCCCACCAACAATGGCAGCTTTCTAGTTTGCTTTAAAGCAGGCCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR TCA 90 bp | ATTCACTCTGTAGACCAGGCTGGCTCTAAACTCAGACATCCACCTGTCTCTGCCCCAAGTTTTATCTTCTaGGTCTGCTTCACAACCTCA | + |
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Preference number: 4 (lower is better) Translates to: IHSVDQAGSKLRHPPVSAPSFIF*VCFTTS Trigger: TGAGGTTGTGAAGCAGACTCAGAAGATAAAACTTGG...GGCAGAGACAGGTGGATGTCTGAGTTTAGAGCCAGCCTGGTCTACAGAGTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR GCA 90 bp | CTATTCAGTTATGCTGCCTGTCAAGGCAGTCAACTCATTCCACAGCTTGGCTACCACGGCCATTCTCTCTaGCAAATCCTGACTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LFSYAACQGSQLIPQLGYHGHSL*QILTSC Trigger: ACAAGAAGTCAGGATTTGGCAGAGAGAATGGCCGTG...GTAGCCAAGCTGTGGAATGAGTTGACTGCCTTGACAGGCAGCATAACTGAATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR TCA 90 bp | TATTATTGTGCAGTGTATGATATGGGGAAGGGGTGGGTTCTAGAGATAAACCTGGCTCCTTTGCCAACTTaGCAAACCCGAGGACTCGTT | + |
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Preference number: 4 (lower is better) Translates to: YYCAVYDMGKGWVLEINLAPLPT*QTRGLV Trigger: AACGAGTCCTCGGGTTTGTCAAGTTGGCAAAGGAGC...CAGGTTTATCTCTAGAACCCACCCCTTCCCCATATCATACACTGCACAATAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR GCA 90 bp | TCCGGTTTCTCAAAGAAAGGACAGAAAAACACAGCGTTTGAGAAAGATTTTATTGTGGCAGCCCCACCTTaGACCACGTTGAAGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: SGFSKKGQKNTAFEKDFIVAAPP*TTLKSP Trigger: GGGGCTCTTCAACGTGGTGCAAGGTGGGGCTGCCAC...AATAAAATCTTTCTCAAACGCTGTGTTTTTCTGTCCTTTCTTTGAGAAACCGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR GCA 90 bp | ATTCACTCTGTAGACCAGGCTGGCTCTAAACTCAGACATCCACCTGTCTCTGCCTCAGCAATTTCCTTTTaGACAAAGACTCTAGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: IHSVDQAGSKLRHPPVSASAISF*TKTLVP Trigger: TGGGACTAGAGTCTTTGTGCAAAAGGAAATTGCTGA...GGCAGAGACAGGTGGATGTCTGAGTTTAGAGCCAGCCTGGTCTACAGAGTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR CCA 90 bp | TCCGGTTTCTCAAAGAAAGGACAGAAAAACACAGCGTTTGAGAAAGATTTTATTACCCGGTGTGCCCTCTaGATGTCCCTGGTGAAGACC | + |
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Preference number: 4 (lower is better) Translates to: SGFSKKGQKNTAFEKDFITRCAL*MSLVKT Trigger: GGTCTTCACCAGGGACATCCAGAGGGCACACCGGGT...AATAAAATCTTTCTCAAACGCTGTGTTTTTCTGTCCTTTCTTTGAGAAACCGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR CCA 90 bp | AGGCACTTGTGCACATTTTCAAACTGGGAAGGTGACTGTAAGACAGAGGACAACAAAGGGCAGCTCCACTaGGCTGACATTATAGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: RHLCTFSNWEGDCKTEDNKGQLH*ADIIVV Trigger: AACAACTATAATGTCAGCCCAGTGGAGCTGCCCTTT...GTTGTCCTCTGTCTTACAGTCACCTTCCCAGTTTGAAAATGTGCACAAGTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR GCA 90 bp | AAGGCACATACCAGTACTGCCCAGCTCCAAATAAAAGCTTTAAGAATTTGTTTTAGCACCCTGCTCCTTTaGCAACTTGACAAACCCGAG | + |
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Preference number: 4 (lower is better) Translates to: KAHTSTAQLQIKALRICFSTLLL*QLDKPE Trigger: CTCGGGTTTGTCAAGTTGGCAAAGGAGCAGGGTGCT...AAAACAAATTCTTAAAGCTTTTATTTGGAGCTGGGCAGTACTGGTATGTGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR TCA 90 bp | GGAAGACAGGATGAGTGTTTACTGAGGCAAGTCAGTTATCTGCGTAAAATCCGAATGTTAAAATGGACATaGCTGGTCCAAAGATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: GRQDECLLRQVSYLRKIRMLKWT*LVQRSL Trigger: AAGAGATCTTTGGACCAGTCATGTCCATTTTAACAT...TCGGATTTTACGCAGATAACTGACTTGCCTCAGTAAACACTCATCCTGTCTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR TCA 90 bp | TCCGGTTTCTCAAAGAAAGGACAGAAAAACACAGCGTTTGAGAAAGATTTTATTTACTTCCTTTTCTCCTaGACACGCGAAAGTGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: SGFSKKGQKNTAFEKDFIYFLFS*TRESGN Trigger: ATTGCCACTTTCGCGTGTTCAGGAGAAAAGGAAGTA...AATAAAATCTTTCTCAAACGCTGTGTTTTTCTGTCCTTTCTTTGAGAAACCGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS TCA 90 bp | TGCCGGAAGCATCCACCGGCTCCACACGGGCCCCGCCGCGGTAGTTaGGCGGCTGCGACACGACGAAGGTGCCAGTACTCATGGCGGCGA | + |
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Preference number: 5 (lower is better) Translates to: CRKHPPAPHGPRRGS*AAATRRRCQYSWRR Trigger: TCGCCGCCATGAGTACTGGCACCTTCGTCGTGTCGCAGCCGCTCAACTACCGCGGCGGGGCCCGTGTGGAGCCGGTGGATGCTTCCGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS GCA 90 bp | AAGTGGCAATCACTCGGCCGGTGGCTGGCTCGAACGCTTTCTCCGTaGCGGAAGCATCCACCGGCTCCACACGGGCCCCGCCGCGGTAGT | + |
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Preference number: 5 (lower is better) Translates to: KWQSLGRWLARTLSP*RKHPPAPHGPRRGS Trigger: ACTACCGCGGCGGGGCCCGTGTGGAGCCGGTGGATGCTTCCGGCACGGAGAAAGCGTTCGAGCCAGCCACCGGCCGAGTGATTGCCACTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS GCA 90 bp | CGGCTGCGACACGACGAAGGTGCCAGTACTCATGGCGGCGACTGCTaGAGCCCGGTGAATGCGGAGGAGCGAGGTCAGCACAGAACCGAC | + |
|
Preference number: 5 (lower is better) Translates to: RLRHDEGASTHGGDC*SPVNAEERGQHRTD Trigger: GTCGGTTCTGTGCTGACCTCGCTCCTCCGCATTCACCGGGCTGCAGCAGTCGCCGCCATGAGTACTGGCACCTTCGTCGTGTCGCAGCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS GCA 90 bp | GAGCGGCTGCGACACGACGAAGGTGCCAGTACTCATGGCGGCGACTaGTGCAGCCCGGTGAATGCGGAGGAGCGAGGTCAGCACAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: ERLRHDEGASTHGGD*CSPVNAEERGQHRT Trigger: GGTTCTGTGCTGACCTCGCTCCTCCGCATTCACCGGGCTGCAGCAGTCGCCGCCATGAGTACTGGCACCTTCGTCGTGTCGCAGCCGCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS TCA 90 bp | ACGACGAAGGTGCCAGTACTCATGGCGGCGACTGCTGCAGCCCGGTaGATGCGGAGGAGCGAGGTCAGCACAGAACCGACTGCACCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TTKVPVLMAATAAAR*MRRSEVSTEPTAPR Trigger: CCTCGGTGCAGTCGGTTCTGTGCTGACCTCGCTCCTCCGCATTCACCGGGCTGCAGCAGTCGCCGCCATGAGTACTGGCACCTTCGTCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS GCA 90 bp | CGAAGGTGCCAGTACTCATGGCGGCGACTGCTGCAGCCCGGTGAATaGGGAGGAGCGAGGTCAGCACAGAACCGACTGCACCGAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: RRCQYSWRRLLQPGE*GGARSAQNRLHRGS Trigger: TGATCCTCGGTGCAGTCGGTTCTGTGCTGACCTCGCTCCTCCGCATTCACCGGGCTGCAGCAGTCGCCGCCATGAGTACTGGCACCTTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS TCA 90 bp | GATGACACAGAAACTGGCCTGTGGCAGCCCCACCTTGCACCACGTTaGAGAGCCCCGGAGGCGCACCCGCTTTGGTGTAGATCTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DDTETGLWQPHLAPR*RAPEAHPLWCRSQP Trigger: TGGCTGAGATCTACACCAAAGCGGGTGCGCCTCCGGGGCTCTTCAACGTGGTGCAAGGTGGGGCTGCCACAGGCCAGTTTCTGTGTCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS GCA 90 bp | GCCGAAGGACCCTCCTGGGAGCTGAATGTGCTCGCCTGCCATGGATaGAGCCAGCCCTGCATAGTATTCCAGGCACTGCCAGCAAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AEGPSWELNVLACHG*SQPCIVFQALPASV Trigger: GACACTTGCTGGCAGTGCCTGGAATACTATGCAGGGCTGGCTGCATCCATGGCAGGCGAGCACATTCAGCTCCCAGGAGGGTCCTTCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CCA 90 bp | TGTAGCCGAAGGACCCTCCTGGGAGCTGAATGTGCTCGCCTGCCATaGATGCAGCCAGCCCTGCATAGTATTCCAGGCACTGCCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSRRTLLGAECARLP*MQPALHSIPGTASK Trigger: CTTGCTGGCAGTGCCTGGAATACTATGCAGGGCTGGCTGCATCCATGGCAGGCGAGCACATTCAGCTCCCAGGAGGGTCCTTCGGCTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS GCA 90 bp | TCCTGGGAGCTGAATGTGCTCGCCTGCCATGGATGCAGCCAGCCCTaGATAGTATTCCAGGCACTGCCAGCAAGTGTCAACATCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SWELNVLACHGCSQP*IVFQALPASVNIQA Trigger: CGCCTGGATGTTGACACTTGCTGGCAGTGCCTGGAATACTATGCAGGGCTGGCTGCATCCATGGCAGGCGAGCACATTCAGCTCCCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CCA 90 bp | CTGCTCCTTTGCCAACTTGACAAACCCGAGGACTCGTTCCAGATGTaGGGCGTTGATGAGTGGGCCCATCCTCGTATCTTCCAGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLCQLDKPEDSFQM*GVDEWAHPRIFQKG Trigger: CCCCTTCTGGAAGATACGAGGATGGGCCCACTCATCAACGCCCCACATCTGGAACGAGTCCTCGGGTTTGTCAAGTTGGCAAAGGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR CAA 90 bp | CTCCCAAGTGCCGGGATTAAAGGCACATACCAGTACTGCCCAGCTCCAAATAAACCACCTTGCACCACGTaGAAGAGCCCCGGAGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPSAGIKGTYQYCPAPNKPPCTT*KSPGGA Trigger: TGCGCCTCCGGGGCTCTTCAACGTGGTGCAAGGTGG...TTTATTTGGAGCTGGGCAGTACTGGTATGTGCCTTTAATCCCGGCACTTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS TCA 90 bp | GGCAGCCTTTGCATTCTCAACGGCCAAGTTTACTTCCTTTTCTCCTaGACACGCGAAAGTGGCAATCACTCGGCCGGTGGCTGGCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: GSLCILNGQVYFLFS*TRESGNHSAGGWLE Trigger: TTCGAGCCAGCCACCGGCCGAGTGATTGCCACTTTCGCGTGTTCAGGAGAAAAGGAAGTAAACTTGGCCGTTGAGAATGCAAAGGCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR CAA 90 bp | ACTACCTGTCTCTCTAGCCAGGTGGTCCGGTTTCTCAAAGAAAGGACAGAAAAACCTTGTGTGAGGAAGTaGGCCATCAGGGCCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TTCLSSQVVRFLKERTEKPCVRK*AIRAPF Trigger: GAAGGGGGCCCTGATGGCCAACTTCCTCACACAAGG...TTTTTCTGTCCTTTCTTTGAGAAACCGGACCACCTGGCTAGAGAGACAGGTAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR CAA 90 bp | TATTATTGTGCAGTGTATGATATGGGGAAGGGGTGGGTTCTAGAGATAAACCTGTGTGGCAGCCCCACCTaGCACCACGTTGAAGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: YYCAVYDMGKGWVLEINLCGSPT*HHVEEP Trigger: GGGCTCTTCAACGTGGTGCAAGGTGGGGCTGCCACA...CAGGTTTATCTCTAGAACCCACCCCTTCCCCATATCATACACTGCACAATAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS TCA 90 bp | GTTGGCCATCAGGGCCCCCTTCACAGCATTCTCCATATTACAGTCTaGGAAGATGATGAGAGGAGATTTGCCCCCAAGTTCCAAAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: VGHQGPLHSILHITV*EDDERRFAPKFQSN Trigger: ATTACTTTGGAACTTGGGGGCAAATCTCCTCTCATCATCTTCTCAGACTGTAATATGGAGAATGCTGTGAAGGGGGCCCTGATGGCCAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR CAA 90 bp | ACTGTAAGACAGAGGACAACACTGACCCGTTATCACACTAATGACCCAAAGCCTATCAGCAATTTCCTTTaGCACAAAGACTCTAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TVRQRTTLTRYHTNDPKPISNFL*HKDSSP Trigger: GGGACTAGAGTCTTTGTGCAAAAGGAAATTGCTGAT...AGGCTTTGGGTCATTAGTGTGATAACGGGTCAGTGTTGTCCTCTGTCTTACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS TCA 90 bp | CTCGCTCTAGAACCTCGGCTTCAGTTCCAAATGTTAAAATGGACATaGCTGGTCCAAAGATCTCTTCTTTTACACAAGTCATGTCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LALEPRLQFQMLKWT*LVQRSLLLHKSCRL Trigger: GAGACGACATGACTTGTGTAAAAGAAGAGATCTTTGGACCAGTCATGTCCATTTTAACATTTGGAACTGAAGCCGAGGTTCTAGAGCGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS GCA 90 bp | GTCTGCTTCACAACCTCATTTATGAATTTATCAGCAATTTCCTTTTaGACAAAGACTCTAGTCCCATTGCAGCAGACCTGTCCTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VCFTTSFMNLSAISF*TKTLVPLQQTCPCV Trigger: CACACAAGGACAGGTCTGCTGCAATGGGACTAGAGTCTTTGTGCAAAAGGAAATTGCTGATAAATTCATAAATGAGGTTGTGAAGCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS-3UTR CAA 90 bp | TCCGGTTTCTCAAAGAAAGGACAGAAAAACACAGCGTTTGAGAAAGATTTTATTTGCTCCTTTGCCAACTaGACAAACCCGAGGACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SGFSKKGQKNTAFEKDFICSFAN*TNPRTR Trigger: ACGAGTCCTCGGGTTTGTCAAGTTGGCAAAGGAGCA...AATAAAATCTTTCTCAAACGCTGTGTTTTTCTGTCCTTTCTTTGAGAAACCGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS GCA 72 bp | TCACTCGGCCGGTGGCTGGCTCGAACGCTTTCTCCGTaGCGGAAGCATCCACCGGCTCCACACGGGCCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SLGRWLARTLSP*RKHPPAPHGPR Trigger: GCGGGGCCCGTGTGGAGCCGGTGGATGCTTCCGGCACGGAGAAAGCGTTCGAGCCAGCCACCGGCCGAGTGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS TCA 72 bp | CATCCACCGGCTCCACACGGGCCCCGCCGCGGTAGTTaGGCGGCTGCGACACGACGAAGGTGCCAGTACTCA | + |
|
Preference number: 6 (lower is better) Translates to: HPPAPHGPRRGS*AAATRRRCQYS Trigger: TGAGTACTGGCACCTTCGTCGTGTCGCAGCCGCTCAACTACCGCGGCGGGGCCCGTGTGGAGCCGGTGGATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS GCA 72 bp | GCACGTTCCAGCCTGCAGCTCAGCCGCCACCCGGTGTaGCCTCTGGATGTCCCTGGTGAAGACCCCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ARSSLQLSRHPV*PLDVPGEDPSC Trigger: GCAGCTGGGGTCTTCACCAGGGACATCCAGAGGGCACACCGGGTGGCGGCTGAGCTGCAGGCTGGAACGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS GCA 72 bp | CGACACGACGAAGGTGCCAGTACTCATGGCGGCGACTaGTGCAGCCCGGTGAATGCGGAGGAGCGAGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RHDEGASTHGGD*CSPVNAEERGQ Trigger: CTGACCTCGCTCCTCCGCATTCACCGGGCTGCAGCAGTCGCCGCCATGAGTACTGGCACCTTCGTCGTGTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS TCA 72 bp | GTGCCAGTACTCATGGCGGCGACTGCTGCAGCCCGGTaGATGCGGAGGAGCGAGGTCAGCACAGAACCGACT | + |
|
Preference number: 6 (lower is better) Translates to: VPVLMAATAAAR*MRRSEVSTEPT Trigger: AGTCGGTTCTGTGCTGACCTCGCTCCTCCGCATTCACCGGGCTGCAGCAGTCGCCGCCATGAGTACTGGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS TCA 72 bp | GAAACTGGCCTGTGGCAGCCCCACCTTGCACCACGTTaGAGAGCCCCGGAGGCGCACCCGCTTTGGTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: ETGLWQPHLAPR*RAPEAHPLWCR Trigger: TCTACACCAAAGCGGGTGCGCCTCCGGGGCTCTTCAACGTGGTGCAAGGTGGGGCTGCCACAGGCCAGTTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS GCA 72 bp | CAGTACTCATGGCGGCGACTGCTGCAGCCCGGTGAATaGGGAGGAGCGAGGTCAGCACAGAACCGACTGCAC | + |
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Preference number: 6 (lower is better) Translates to: QYSWRRLLQPGE*GGARSAQNRLH Trigger: GTGCAGTCGGTTCTGTGCTGACCTCGCTCCTCCGCATTCACCGGGCTGCAGCAGTCGCCGCCATGAGTACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS TCA 72 bp | CAGCCGCCACCCGGTGTGCCCTCTGGATGTCCCTGGTaGAGACCCCAGCTGCTAGTCCAAAAGTGGTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QPPPGVPSGCPW*RPQLLVQKWCH Trigger: ATGACACCACTTTTGGACTAGCAGCTGGGGTCTTCACCAGGGACATCCAGAGGGCACACCGGGTGGCGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS GCA 72 bp | CCCTCCTGGGAGCTGAATGTGCTCGCCTGCCATGGATaGAGCCAGCCCTGCATAGTATTCCAGGCACTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PSWELNVLACHG*SQPCIVFQALP Trigger: TGGCAGTGCCTGGAATACTATGCAGGGCTGGCTGCATCCATGGCAGGCGAGCACATTCAGCTCCCAGGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS GCA 72 bp | GCCGAAGGACCCTCCTGGGAGCTGAATGTGCTCGCCTaGCATGGATGCAGCCAGCCCTGCATAGTATTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AEGPSWELNVLA*HGCSQPCIVFQ Trigger: CTGGAATACTATGCAGGGCTGGCTGCATCCATGGCAGGCGAGCACATTCAGCTCCCAGGAGGGTCCTTCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CCA 72 bp | CCCGAGGACTCGTTCCAGATGTGGGGCGTTGATGAGTaGGCCCATCCTCGTATCTTCCAGAAGGGGGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PEDSFQMWGVDE*AHPRIFQKGVS Trigger: GGAGACCCCCTTCTGGAAGATACGAGGATGGGCCCACTCATCAACGCCCCACATCTGGAACGAGTCCTCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CAA 90 bp | CCGTTGTTGATGGTCTCCACGGTGGCAATTTCATCCTTCCGCTCCTaGATGATCCGGGCAGCCTCTAGGAGGACTTGGCAGCGCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PLLMVSTVAISSFRS*MIRAASRRTWQRSR Trigger: CCTGGAGCGCTGCCAAGTCCTCCTAGAGGCTGCCCGGATCATCAAGGAGCGGAAGGATGAAATTGCCACCGTGGAGACCATCAACAACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CAA 72 bp | CCACACAGCACAGTAGCACCCTGCTCCTTTGCCAACTaGACAAACCCGAGGACTCGTTCCAGATGTGGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PHSTVAPCSFAN*TNPRTRSRCGA Trigger: CGCCCCACATCTGGAACGAGTCCTCGGGTTTGTCAAGTTGGCAAAGGAGCAGGGTGCTACTGTGCTGTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS GCA 72 bp | CTGAATGTGCTCGCCTGCCATGGATGCAGCCAGCCCTaGATAGTATTCCAGGCACTGCCAGCAAGTGTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LNVLACHGCSQP*IVFQALPASVN Trigger: GTTGACACTTGCTGGCAGTGCCTGGAATACTATGCAGGGCTGGCTGCATCCATGGCAGGCGAGCACATTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CAA 72 bp | ATGGTCTCCACGGTGGCAATTTCATCCTTCCGCTCCTaGATGATCCGGGCAGCCTCTAGGAGGACTTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: MVSTVAISSFRS*MIRAASRRTWQ Trigger: CTGCCAAGTCCTCCTAGAGGCTGCCCGGATCATCAAGGAGCGGAAGGATGAAATTGCCACCGTGGAGACCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CAA 90 bp | TTTGCCAACTTGACAAACCCGAGGACTCGTTCCAGATGTGGGGCGTaGATGAGTGGGCCCATCCTCGTATCTTCCAGAAGGGGGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FANLTNPRTRSRCGA*MSGPILVSSRRGSP Trigger: TGGAGACCCCCTTCTGGAAGATACGAGGATGGGCCCACTCATCAACGCCCCACATCTGGAACGAGTCCTCGGGTTTGTCAAGTTGGCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CAA 90 bp | ACCTCTCCACCACACAGCACAGTAGCACCCTGCTCCTTTGCCAACTaGACAAACCCGAGGACTCGTTCCAGATGTGGGGCGTTGATGAGT | + |
|
Preference number: 6 (lower is better) Translates to: TSPPHSTVAPCSFAN*TNPRTRSRCGALMS Trigger: ACTCATCAACGCCCCACATCTGGAACGAGTCCTCGGGTTTGTCAAGTTGGCAAAGGAGCAGGGTGCTACTGTGCTGTGTGGTGGAGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS GCA 72 bp | AGACTTCCAACAGGCGATCTGGAAGGGATAGTTCCATaGTCCTATCCCCACACACACCCCAAGCGGCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RLPTGDLEGIVP*SYPHTHPKRLS Trigger: AGAGAGCCGCTTGGGGTGTGTGTGGGGATAGGAGCATGGAACTATCCCTTCCAGATCGCCTGTTGGAAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CCA 72 bp | TGCCAACTTGACAAACCCGAGGACTCGTTCCAGATGTaGGGCGTTGATGAGTGGGCCCATCCTCGTATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CQLDKPEDSFQM*GVDEWAHPRIF Trigger: GAAGATACGAGGATGGGCCCACTCATCAACGCCCCACATCTGGAACGAGTCCTCGGGTTTGTCAAGTTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CAA 72 bp | CACAAAGACTCTAGTCCCATTGCAGCAGACCTGTCCTaGTGTGAGGAAGTTGGCCATCAGGGCCCCCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: HKDSSPIAADLS*CEEVGHQGPLH Trigger: GTGAAGGGGGCCCTGATGGCCAACTTCCTCACACAAGGACAGGTCTGCTGCAATGGGACTAGAGTCTTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CAA 72 bp | TTGACAAACCCGAGGACTCGTTCCAGATGTGGGGCGTaGATGAGTGGGCCCATCCTCGTATCTTCCAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LTNPRTRSRCGA*MSGPILVSSRR Trigger: CCTTCTGGAAGATACGAGGATGGGCCCACTCATCAACGCCCCACATCTGGAACGAGTCCTCGGGTTTGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS TCA 72 bp | CATCCAGGCGGGCCTCAAATATGGACTTCCCGTTGTTaGTGGTCTCCACGGTGGCAATTTCATCCTTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: HPGGPQIWTSRC*WSPRWQFHPSA Trigger: AGCGGAAGGATGAAATTGCCACCGTGGAGACCATCAACAACGGGAAGTCCATATTTGAGGCCCGCCTGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CCA 72 bp | CCAAGTTTACTTCCTTTTCTCCTGAACACGCGAAAGTaGCAATCACTCGGCCGGTGGCTGGCTCGAACGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PSLLPFLLNTRK*QSLGRWLARTL Trigger: AAGCGTTCGAGCCAGCCACCGGCCGAGTGATTGCCACTTTCGCGTGTTCAGGAGAAAAGGAAGTAAACTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CAA 72 bp | ACATCCAGGCGGGCCTCAAATATGGACTTCCCGTTGTaGATGGTCTCCACGGTGGCAATTTCATCCTTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TSRRASNMDFPL*MVSTVAISSFR Trigger: GCGGAAGGATGAAATTGCCACCGTGGAGACCATCAACAACGGGAAGTCCATATTTGAGGCCCGCCTGGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CAA 90 bp | CAGCAAGTGTCAACATCCAGGCGGGCCTCAAATATGGACTTCCCGTaGTTGATGGTCTCCACGGTGGCAATTTCATCCTTCCGCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QQVSTSRRASNMDFP*LMVSTVAISSFRSL Trigger: CAAGGAGCGGAAGGATGAAATTGCCACCGTGGAGACCATCAACAACGGGAAGTCCATATTTGAGGCCCGCCTGGATGTTGACACTTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS TCA 72 bp | TGCATTCTCAACGGCCAAGTTTACTTCCTTTTCTCCTaGACACGCGAAAGTGGCAATCACTCGGCCGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: CILNGQVYFLFS*TRESGNHSAGG Trigger: GCCACCGGCCGAGTGATTGCCACTTTCGCGTGTTCAGGAGAAAAGGAAGTAAACTTGGCCGTTGAGAATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CAA 90 bp | CAAGTGTCAACATCCAGGCGGGCCTCAAATATGGACTTCCCGTTGTaGATGGTCTCCACGGTGGCAATTTCATCCTTCCGCTCCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: QVSTSRRASNMDFPL*MVSTVAISSFRSLM Trigger: CATCAAGGAGCGGAAGGATGAAATTGCCACCGTGGAGACCATCAACAACGGGAAGTCCATATTTGAGGCCCGCCTGGATGTTGACACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CAA 72 bp | TCAACATCCAGGCGGGCCTCAAATATGGACTTCCCGTaGTTGATGGTCTCCACGGTGGCAATTTCATCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: STSRRASNMDFP*LMVSTVAISSF Trigger: GAAGGATGAAATTGCCACCGTGGAGACCATCAACAACGGGAAGTCCATATTTGAGGCCCGCCTGGATGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CAA 72 bp | AGAGGAGATTTGCCCCCAAGTTCCAAAGTAATGGGCTaGACTCCCTTAGCGGACATCTCCATGATCTTCACG | + |
|
Preference number: 6 (lower is better) Translates to: RGDLPPSSKVMG*TPLADISMIFT Trigger: CGTGAAGATCATGGAGATGTCCGCTAAGGGAGTCAAGCCCATTACTTTGGAACTTGGGGGCAAATCTCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CAA 90 bp | ATGAATTTATCAGCAATTTCCTTTTGCACAAAGACTCTAGTCCCATaGCAGCAGACCTGTCCTTGTGTGAGGAAGTTGGCCATCAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: MNLSAISFCTKTLVP*QQTCPCVRKLAIRA Trigger: GGCCCTGATGGCCAACTTCCTCACACAAGGACAGGTCTGCTGCAATGGGACTAGAGTCTTTGTGCAAAAGGAAATTGCTGATAAATTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CCA 72 bp | AAATGCAAGGTGTCATGTAATATCCATGTTTTAATTTaGGGTCCTCTGGTACATACACCTCTCCACCACACA | + |
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Preference number: 6 (lower is better) Translates to: KCKVSCNIHVLI*GPLVHTPLHHT Trigger: TGTGTGGTGGAGAGGTGTATGTACCAGAGGACCCCAAATTAAAACATGGATATTACATGACACCTTGCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CAA 90 bp | AGTCTGCTTCACAACCTCATTTATGAATTTATCAGCAATTTCCTTTaGCACAAAGACTCTAGTCCCATTGCAGCAGACCTGTCCTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: SLLHNLIYEFISNFL*HKDSSPIAADLSLC Trigger: ACACAAGGACAGGTCTGCTGCAATGGGACTAGAGTCTTTGTGCAAAAGGAAATTGCTGATAAATTCATAAATGAGGTTGTGAAGCAGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS TCA 72 bp | GAACCTCGGCTTCAGTTCCAAATGTTAAAATGGACATaGCTGGTCCAAAGATCTCTTCTTTTACACAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: EPRLQFQMLKWT*LVQRSLLLHKS Trigger: TGACTTGTGTAAAAGAAGAGATCTTTGGACCAGTCATGTCCATTTTAACATTTGGAACTGAAGCCGAGGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS CAA 72 bp | CACAACCTCATTTATGAATTTATCAGCAATTTCCTTTaGCACAAAGACTCTAGTCCCATTGCAGCAGACCTG | + |
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Preference number: 6 (lower is better) Translates to: HNLIYEFISNFL*HKDSSPIAADL Trigger: CAGGTCTGCTGCAATGGGACTAGAGTCTTTGTGCAAAAGGAAATTGCTGATAAATTCATAAATGAGGTTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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| CDS TCA 72 bp | GTTTTATCTTCTGAGTCTGCTTCACAACCTCATTTATaGATTTATCAGCAATTTCCTTTTGCACAAAGACTC | + |
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Preference number: 6 (lower is better) Translates to: VLSSESASQPHL*IYQQFPFAQRL Trigger: GAGTCTTTGTGCAAAAGGAAATTGCTGATAAATTCATAAATGAGGTTGTGAAGCAGACTCAGAAGATAAAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028004.11 |
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