Pregenerated sensors for ALDH8A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037542Ensembl transcript IDs: ENSMUST00000042699.14
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGTGTGTGTGTTGTGTTATATACCACCAGGTCAGTCTTTTGCACTaGTGCTGGGATCTGAGCTCAGGGTCTTGTGCTCATACAGCAAGC | + |
|
Preference number: 1 (lower is better) Translates to: VCVCCVIYHQVSLLH*CWDLSSGSCAHTAS Trigger: GCTTGCTGTATGAGCACAAGACCCTGAGCTCAGATCCCAGCATCAGTGCAAAAGACTGACCTGGTGGTATATAACACAACACACACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| 3UTR-3UTR GCA 90 bp | GCTCAGGCAATTAGCAGTCAAAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCATGTTGTTGTTGTCGCTaGTGGTGGTGGTGGTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: AQAISSQSWVVAMGLRGSCCCCR*WWWWWW Trigger: CCACCACCACCACCACCAGCAGCGACAACAACAACA...TGAGCCTCTCAGCCCCATAGCCACTACCCAACTTTGACTGCTAATTGCCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCATCTTCAAAGCTTTGTCAAGGACTGATGCTGGGATCTaGGCTCAGGGTCTTGTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: KLGSGYGAERLIFKALSRTDAGI*AQGLVL Trigger: GAGCACAAGACCCTGAGCTCAGATCCCAGCATCAGT...CCTTGACAAAGCTTTGAAGATGAGCCTCTCAGCCCCATAGCCACTACCCAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| 3UTR CAA 90 bp | TTGTCAAGGGAGAAATTGATGGTGCGTTGTTTCTCTTCAGGCTTGTaGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGCTGCTGGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LSREKLMVRCFSSGL*LLLLLLLLLSLLVV Trigger: CACCACCAGCAGCGACAACAACAACAACAACAACAACAACAACAACAAGCCTGAAGAGAAACAACGCACCATCAATTTCTCCCTTGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| 3UTR-3UTR CCA 90 bp | TTCCCTTACTTGTATCAGACATATTTAGTAAGATCTATCGTGTGTGACGCTCACATTAGCAGTCAAAGTTaGGTAGTGGCTATGGGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: FPYLYQTYLVRSIVCDAHISSQS*VVAMGL Trigger: CAGCCCCATAGCCACTACCCAACTTTGACTGCTAAT...GTGAGCGTCACACACGATAGATCTTACTAAATATGTCTGATACAAGTAAGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| 3UTR-3UTR CAA 90 bp | GCTCAGGCAATTAGCAGTCAAAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCAGTCCTAGGATCTCTGTaGACTGCACTGACAAGCGAT | + |
|
Preference number: 3 (lower is better) Translates to: AQAISSQSWVVAMGLRGSVLGSL*TALTSD Trigger: ATCGCTTGTCAGTGCAGTCAACAGAGATCCTAGGAC...TGAGCCTCTCAGCCCCATAGCCACTACCCAACTTTGACTGCTAATTGCCTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| 3UTR TCA 72 bp | TGTTGTGTTATATACCACCAGGTCAGTCTTTTGCACTaGTGCTGGGATCTGAGCTCAGGGTCTTGTGCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: CCVIYHQVSLLH*CWDLSSGSCAH Trigger: ATGAGCACAAGACCCTGAGCTCAGATCCCAGCATCAGTGCAAAAGACTGACCTGGTGGTATATAACACAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| 3UTR TCA 72 bp | AGAGGCTCATCTTCAAAGCTTTGTCAAGGGAGAAATTaGTGGTGCGTTGTTTCTCTTCAGGCTTGTTGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: RGSSSKLCQGRN*WCVVSLQACCC Trigger: ACAACAACAAGCCTGAAGAGAAACAACGCACCATCAATTTCTCCCTTGACAAAGCTTTGAAGATGAGCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| 3UTR TCA 72 bp | CTTGTATCAGACATATTTAGTAAGATCTATCGTGTGTaGCGCTCACAAGCTCTTCGGACAACCATCACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LVSDIFSKIYRV*RSQALRTTITS Trigger: GGAAGTGATGGTTGTCCGAAGAGCTTGTGAGCGTCACACACGATAGATCTTACTAAATATGTCTGATACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CCA 90 bp | GCACTGACAAGCGATTCTCTGCTGGCAGGCGTCAACCACAGCAGCTGTAGGATGCAGGGAAGGCCTCTCTaGCAGCCTCCACGGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALTSDSLLAGVNHSSCRMQGRPL*QPPRQL Trigger: AAGCTGCCGTGGAGGCTGCCAGAGAGGCCTTCCCTG...CATCCTACAGCTGCTGTGGTTGACGCCTGCCAGCAGAGAATCGCTTGTCAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR GCA 90 bp | GCACTGACAAGCGATTCTCTGCTGGCAGGCGTCAACCACAGCAGCTGTAGGATGAACTCCTCCAGAGACTaGTCCAGTACATCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALTSDSLLAGVNHSSCRMNSSRD*SSTSAS Trigger: GCTGGCTGATGTACTGGAGCAGTCTCTGGAGGAGTT...CATCCTACAGCTGCTGTGGTTGACGCCTGCCAGCAGAGAATCGCTTGTCAGTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR GCA 90 bp | GCACTGACAAGCGATTCTCTGCTGGCAGGCGTCAACCACAGCAGCTGTAGGATGAAGCATGAAGTAGCCTaGCTGGTTCCTGAGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALTSDSLLAGVNHSSCRMKHEVA*LVPEWK Trigger: CTTCCACTCAGGAACCAGGCAGGCTACTTCATGCTT...CATCCTACAGCTGCTGTGGTTGACGCCTGCCAGCAGAGAATCGCTTGTCAGTGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CCA 90 bp | GCTCAGGCAATTAGCAGTCAAAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCATATTCCCAGCAGCGATaGCCGGAGCTATCTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQAISSQSWVVAMGLRGSYSQQR*PELSSR Trigger: CCTGGAAGATAGCTCCGGCCATCGCTGCTGGGAATA...TGAGCCTCTCAGCCCCATAGCCACTACCCAACTTTGACTGCTAATTGCCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CCA 90 bp | GATCTGAGCTCAGGGTCTTGTGCTCATACAGCAAGCACGCTACCCACTGAGTCAATACGTGGTGCAGGTTaGAGGAAGCGAAGAACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: DLSSGSCAHTASTLPTESIRGAG*RKRRTG Trigger: TCCGGTTCTTCGCTTCCTCCAACCTGCACCACGTAT...TGACTCAGTGGGTAGCGTGCTTGCTGTATGAGCACAAGACCCTGAGCTCAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CCA 90 bp | GCACTGACAAGCGATTCTCTGCTGGCAGGCGTCAACCACAGCAGCTGTAGGATGCAGAAGTCATCTCACTaGGCTTGGCTATCACGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ALTSDSLLAGVNHSSCRMQKSSH*AWLSRY Trigger: ATACCGTGATAGCCAAGCCCAGTGAGATGACTTCTG...CATCCTACAGCTGCTGTGGTTGACGCCTGCCAGCAGAGAATCGCTTGTCAGTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CCA 90 bp | AAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCATCTTCAAAGCTTTGTCAAGGCGTTCAGCTGTGGGCTaGCTCCCAGTGAACGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: KLGSGYGAERLIFKALSRRSAVG*LPVNEI Trigger: GATCTCGTTCACTGGGAGCCAGCCCACAGCTGAACG...CCTTGACAAAGCTTTGAAGATGAGCCTCTCAGCCCCATAGCCACTACCCAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR TCA 90 bp | AGTCAAAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCATCTTCAAAGCTTTGTTGGGCTGGCTCCCAGTaGACGAGATCAAGGGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: SQSWVVAMGLRGSSSKLCWAGSQ*TRSRVP Trigger: AGGTACCCTTGATCTCGTTCACTGGGAGCCAGCCCA...ACAAAGCTTTGAAGATGAGCCTCTCAGCCCCATAGCCACTACCCAACTTTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR TCA 90 bp | CAGGCTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGCTGCTGGTGGTGGTCACCGTGGGAAGCATaGAGTAGCCTGCCTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QACCCCCCCCCCCRCWWWSPWEA*SSLPGS Trigger: GGAACCAGGCAGGCTACTTCATGCTTCCCACGGTGA...CCACCACCAGCAGCGACAACAACAACAACAACAACAACAACAACAACAAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR TCA 90 bp | AGTCAAAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCATCTTCAAAGCTTTGTCAGACCAGCCCCGACTaGAGCTTCTTAGCTACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQSWVVAMGLRGSSSKLCQTSPD*SFLATL Trigger: CAGGGTAGCTAAGAAGCTTCAGTCGGGGCTGGTCTG...ACAAAGCTTTGAAGATGAGCCTCTCAGCCCCATAGCCACTACCCAACTTTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CCA 90 bp | AGTCAAAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCATCTTCAAAGCTTTGTGTGCACTCCGATACGTaGTGCAGGTTGGAGGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SQSWVVAMGLRGSSSKLCVHSDT*CRLEEA Trigger: CGCTTCCTCCAACCTGCACCACGTATCGGAGTGCAC...ACAAAGCTTTGAAGATGAGCCTCTCAGCCCCATAGCCACTACCCAACTTTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CCA 90 bp | AGTCAAAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCATCTTCAAAGCTTTGTAGTGGAAGGCTCAGCTaGTCCACACCCTCACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SQSWVVAMGLRGSSSKLCSGRLS*STPSPQ Trigger: CTGTGGTGAGGGTGTGGACCAGCTGAGCCTTCCACT...ACAAAGCTTTGAAGATGAGCCTCTCAGCCCCATAGCCACTACCCAACTTTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CCA 90 bp | AGTCAAAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCATCTTCAAAGCTTTGTTGCCTGGTTCCTGAGTaGAAGGCTCAGCTGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SQSWVVAMGLRGSSSKLCCLVPE*KAQLVH Trigger: GTGGACCAGCTGAGCCTTCCACTCAGGAACCAGGCA...ACAAAGCTTTGAAGATGAGCCTCTCAGCCCCATAGCCACTACCCAACTTTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR TCA 90 bp | GATCTGAGCTCAGGGTCTTGTGCTCATACAGCAAGCACGCTACCCACTGAGTCATTCCAAACACAATGTTaGTCACACCTGGTGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: DLSSGSCAHTASTLPTESFQTQC*SHLVGH Trigger: GTGTCCCACCAGGTGTGATCAACATTGTGTTTGGAA...TGACTCAGTGGGTAGCGTGCTTGCTGTATGAGCACAAGACCCTGAGCTCAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR TCA 90 bp | TTGTGTTATATACCACCAGGTCAGTCTTTTGCACTGATGCTGGGATCTGAGCTCAAGGGTACCTCGGGGTaGGACACAAGGGCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LCYIPPGQSFALMLGSELKGTSG*DTRASP Trigger: TGGTGAAGCCCTTGTGTCTCACCCCGAGGTACCCTT...GAGCTCAGATCCCAGCATCAGTGCAAAAGACTGACCTGGTGGTATATAACACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR TCA 90 bp | AGTCAAAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCATCTTCAAAGCTTTGTAGCACCCATGTTGGCTaGTGGGTCAGAAGGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: SQSWVVAMGLRGSSSKLCSTHVG*WVRRNT Trigger: GGTGTTCCTTCTGACCCATCAGCCAACATGGGTGCT...ACAAAGCTTTGAAGATGAGCCTCTCAGCCCCATAGCCACTACCCAACTTTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CCA 90 bp | CAGGCTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGCTGCTGGTGGTGGTCATCTCACTGGGCTTaGCTATCACGGTATTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QACCCCCCCCCCCRCWWWSSHWA*LSRYSQ Trigger: CTGGGAATACCGTGATAGCCAAGCCCAGTGAGATGA...CCACCACCAGCAGCGACAACAACAACAACAACAACAACAACAACAACAAGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CCA 90 bp | GATCTGAGCTCAGGGTCTTGTGCTCATACAGCAAGCACGCTACCCACTGAGTCAGGACAAAGATTCTACTaGTACAAAGGCAAATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DLSSGSCAHTASTLPTESGQRFY*YKGKSP Trigger: GGGAGATTTGCCTTTGTACCAGTAGAATCTTTGTCC...TGACTCAGTGGGTAGCGTGCTTGCTGTATGAGCACAAGACCCTGAGCTCAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CCA 90 bp | TTGTGTTATATACCACCAGGTCAGTCTTTTGCACTGATGCTGGGATCTGAGCTCTTCTTAGCTACCCTGTaGATGCGCCCCACATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LCYIPPGQSFALMLGSELFLATL*MRPTSL Trigger: CAAGGATGTGGGGCGCATCCACAGGGTAGCTAAGAA...GAGCTCAGATCCCAGCATCAGTGCAAAAGACTGACCTGGTGGTATATAACACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR TCA 90 bp | AGTCAAAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCATCTTCAAAGCTTTGTTCTTTAGATTCTGCCTaGGCTAACTCCTCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SQSWVVAMGLRGSSSKLCSLDSA*ANSSRD Trigger: GTCTCTGGAGGAGTTAGCTCAGGCAGAATCTAAAGA...ACAAAGCTTTGAAGATGAGCCTCTCAGCCCCATAGCCACTACCCAACTTTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CCA 90 bp | TTCCCTTACTTGTATCAGACATATTTAGTAAGATCTATCGTGTGTGACGCTCACTGCGCCCCACATCCTTaGACCACACTGTGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPYLYQTYLVRSIVCDAHCAPHP*TTLWLP Trigger: TGGCAGCCACAGTGTGGTCCAAGGATGTGGGGCGCA...GTGAGCGTCACACACGATAGATCTTACTAAATATGTCTGATACAAGTAAGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CCA 90 bp | CAGGCTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGCTGCTGGTGGTGGAACAACACACGTCACTaGACCAAAGATCTCTTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QACCCCCCCCCCCRCWWWNNTRH*TKDLFR Trigger: ACGGAAGAGATCTTTGGTCCAGTGACGTGTGTTGTT...CCACCACCAGCAGCGACAACAACAACAACAACAACAACAACAACAACAAGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| 3UTR CAA 72 bp | AGTGGCTATGGGGCTGAGAGGCTCATCTTCAAAGCTTaGTCAAGGGAGAAATTGATGGTGCGTTGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGYGAERLIFKA*SREKLMVRCFS Trigger: AGAGAAACAACGCACCATCAATTTCTCCCTTGACAAAGCTTTGAAGATGAGCCTCTCAGCCCCATAGCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CCA 90 bp | AGTCAAAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCATCTTCAAAGCTTTGTAGTCATATGAGTCCTTaGCTCCTTCTCTTCCTATTC | + |
|
Preference number: 4 (lower is better) Translates to: SQSWVVAMGLRGSSSKLCSHMSP*LLLFLF Trigger: GAATAGGAAGAGAAGGAGCCAAGGACTCATATGACT...ACAAAGCTTTGAAGATGAGCCTCTCAGCCCCATAGCCACTACCCAACTTTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| 3UTR CAA 72 bp | ATGGTGCGTTGTTTCTCTTCAGGCTTGTTGTTGTTGTaGTTGTTGTTGTTGTTGTTGTCGCTGCTGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MVRCFSSGLLLL*LLLLLLSLLVV Trigger: CACCACCAGCAGCGACAACAACAACAACAACAACAACAACAACAACAAGCCTGAAGAGAAACAACGCACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR TCA 90 bp | TTGTGTTATATACCACCAGGTCAGTCTTTTGCACTGATGCTGGGATCTGAGCTCAGTAAAGAAGTCATATaGGTCCTTGGCTCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCYIPPGQSFALMLGSELSKEVI*VLGSFS Trigger: AGAGAAGGAGCCAAGGACTCATATGACTTCTTTACT...GAGCTCAGATCCCAGCATCAGTGCAAAAGACTGACCTGGTGGTATATAACACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| 3UTR CAA 72 bp | GAGAGGCTCATCTTCAAAGCTTTGTCAAGGGAGAAATaGATGGTGCGTTGTTTCTCTTCAGGCTTGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ERLIFKALSREK*MVRCFSSGLLL Trigger: CAACAACAAGCCTGAAGAGAAACAACGCACCATCAATTTCTCCCTTGACAAAGCTTTGAAGATGAGCCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR TCA 90 bp | AGTCAAAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCATCTTCAAAGCTTTGTATAAACTTCCCCTGTTaGTGGATCGTAAGAATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SQSWVVAMGLRGSSSKLCINFPC*WIVRIY Trigger: ATAGATTCTTACGATCCATCAACAGGGGAAGTTTAT...ACAAAGCTTTGAAGATGAGCCTCTCAGCCCCATAGCCACTACCCAACTTTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR GCA 90 bp | CAGGCTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGCTGCTGGTGGTGGGAAATTCACTGTAGATaGTTCTCTGGACAAAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: QACCCCCCCCCCCRCWWWEIHCR*FSGQRF Trigger: GAATCTTTGTCCAGAGAAGCATCTACAGTGAATTTC...CCACCACCAGCAGCGACAACAACAACAACAACAACAACAACAACAACAAGCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR GCA 90 bp | TTCCCTTACTTGTATCAGACATATTTAGTAAGATCTATCGTGTGTGACGCTCACTCTCCAAATGTGCTTTaGTTATCAGAGCACCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: FPYLYQTYLVRSIVCDAHSPNVL*LSEHPC Trigger: ACATGGGTGCTCTGATAAGCAAAGCACATTTGGAGA...GTGAGCGTCACACACGATAGATCTTACTAAATATGTCTGATACAAGTAAGGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| 3UTR CAA 72 bp | CTTCAAAGCTTTGTCAAGGGAGAAATTGATGGTGCGTaGTTTCTCTTCAGGCTTGTTGTTGTTGTTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LQSFVKGEIDGA*FLFRLVVVVVV Trigger: AACAACAACAACAACAACAAGCCTGAAGAGAAACAACGCACCATCAATTTCTCCCTTGACAAAGCTTTGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS TCA 90 bp | GCTGTGGGCTGGCTCCCAGTGAACGAGATCAAGGGTACCTCGGGGTaGGACACAAGGGCTTCACCAACCCTCGGCCCTGTTCCAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: AVGWLPVNEIKGTSG*DTRASPTLGPVPNT Trigger: TGTGTTTGGAACAGGGCCGAGGGTTGGTGAAGCCCTTGTGTCTCACCCCGAGGTACCCTTGATCTCGTTCACTGGGAGCCAGCCCACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS TCA 90 bp | TTCAGCTCCCTGATGAGCCAGCAGTTGGTCCAGACCAGCCCCGACTaGAGCTTCTTAGCTACCCTGTGGATGCGCCCCACATCCTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FSSLMSQQLVQTSPD*SFLATLWMRPTSLD Trigger: GTCCAAGGATGTGGGGCGCATCCACAGGGTAGCTAAGAAGCTTCAGTCGGGGCTGGTCTGGACCAACTGCTGGCTCATCAGGGAGCTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS GCA 90 bp | GGGTGCGAACGGTGTAATGCATACAGCCCAGGTGGCTCATCTGTGTaGACTCCGATACGTGGTGCAGGTTGGAGGAAGCGAAGAACCGGA | + |
|
Preference number: 5 (lower is better) Translates to: GCERCNAYSPGGSSV*TPIRGAGWRKRRTG Trigger: TCCGGTTCTTCGCTTCCTCCAACCTGCACCACGTATCGGAGTGCACACAGATGAGCCACCTGGGCTGTATGCATTACACCGTTCGCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CCA 90 bp | TGTTATCACCGTGGGAAGCATGAAGTAGCCTGCCTGGTTCCTGAGTaGAAGGCTCAGCTGGTCCACACCCTCACCACAGAGAATCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CYHRGKHEVACLVPE*KAQLVHTLTTENPG Trigger: GCCCGGATTCTCTGTGGTGAGGGTGTGGACCAGCTGAGCCTTCCACTCAGGAACCAGGCAGGCTACTTCATGCTTCCCACGGTGATAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS GCA 90 bp | TGCATACAGCCCAGGTGGCTCATCTGTGTGCACTCCGATACGTGGTaGAGGTTGGAGGAAGCGAAGAACCGGAAGTTCAGAACAGACCGA | + |
|
Preference number: 5 (lower is better) Translates to: CIQPRWLICVHSDTW*RLEEAKNRKFRTDR Trigger: TCGGTCTGTTCTGAACTTCCGGTTCTTCGCTTCCTCCAACCTGCACCACGTATCGGAGTGCACACAGATGAGCCACCTGGGCTGTATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS GCA 90 bp | AGCTACCCTGTGGATGCGCCCCACATCCTTGGACCACACTGTGGCTaGCAGCCCGTATCTAACACTGTTAGCTCTCGTAATCACTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SYPVDAPHILGPHCG*QPVSNTVSSRNHFL Trigger: GAGGAAGTGATTACGAGAGCTAACAGTGTTAGATACGGGCTGGCAGCCACAGTGTGGTCCAAGGATGTGGGGCGCATCCACAGGGTAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CCA 90 bp | AGCCCAGGTGGCTCATCTGTGTGCACTCCGATACGTGGTGCAGGTTaGAGGAAGCGAAGAACCGGAAGTTCAGAACAGACCGAGGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: SPGGSSVCTPIRGAG*RKRRTGSSEQTEEC Trigger: ACATTCCTCGGTCTGTTCTGAACTTCCGGTTCTTCGCTTCCTCCAACCTGCACCACGTATCGGAGTGCACACAGATGAGCCACCTGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS TCA 90 bp | GTCCTTGCCAGCGTGAGGGTTTTCCCTTGGTCTTTAGATTCTGCCTaGGCTAACTCCTCCAGAGACTGCTCCAGTACATCAGCCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLASVRVFPWSLDSA*ANSSRDCSSTSASL Trigger: CAGGCTGGCTGATGTACTGGAGCAGTCTCTGGAGGAGTTAGCTCAGGCAGAATCTAAAGACCAAGGGAAAACCCTCACGCTGGCAAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS GCA 90 bp | CTCATCCTTAATGTCTGTTATCACCGTGGGAAGCATGAAGTAGCCTaGCTGGTTCCTGAGTGGAAGGCTCAGCTGGTCCACACCCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LILNVCYHRGKHEVA*LVPEWKAQLVHTLT Trigger: GGTGAGGGTGTGGACCAGCTGAGCCTTCCACTCAGGAACCAGGCAGGCTACTTCATGCTTCCCACGGTGATAACAGACATTAAGGATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CAA 90 bp | CAGGCTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGCTGCTGGTGGTGGATGCGCCCCACATCCTaGGACCACACTGTGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QACCCCCCCCCCCRCWWWMRPTS*DHTVAA Trigger: GGCAGCCACAGTGTGGTCCAAGGATGTGGGGCGCAT...CCACCACCAGCAGCGACAACAACAACAACAACAACAACAACAACAACAAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CAA 90 bp | AGTCAAAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCATCTTCAAAGCTTTGTCTGATGAGCCAGCAGTaGGTCCAGACCAGCCCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: SQSWVVAMGLRGSSSKLCLMSQQ*VQTSPD Trigger: GTCGGGGCTGGTCTGGACCAACTGCTGGCTCATCAG...ACAAAGCTTTGAAGATGAGCCTCTCAGCCCCATAGCCACTACCCAACTTTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CCA 90 bp | AAGTCATCTCACTGGGCTTGGCTATCACGGTATTCCCAGCAGCGATaGCCGGAGCTATCTTCCAGGTCAGCAGGTAGAGTGGTAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSSHWAWLSRYSQQR*PELSSRSAGRVVNS Trigger: GGAATTTACCACTCTACCTGCTGACCTGGAAGATAGCTCCGGCCATCGCTGCTGGGAATACCGTGATAGCCAAGCCCAGTGAGATGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS TCA 90 bp | GAGCTATCTTCCAGGTCAGCAGGTAGAGTGGTAAATTCCAAGGGCTaGTCAAACCAGCAATTCCCACCGGGGTGCGAACGGTGTAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: ELSSRSAGRVVNSKG*SNQQFPPGCERCNA Trigger: TGCATTACACCGTTCGCACCCCGGTGGGAATTGCTGGTTTGATCAGCCCTTGGAATTTACCACTCTACCTGCTGACCTGGAAGATAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS GCA 90 bp | GAAGAACCGGAAGTTCAGAACAGACCGAGGAATGTCCATGGTCCTTaGCAGCGTGAGGGTTTTCCCTTGGTCTTTAGATTCTGCCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: EEPEVQNRPRNVHGP*QREGFPLVFRFCLS Trigger: GCTCAGGCAGAATCTAAAGACCAAGGGAAAACCCTCACGCTGGCAAGGACCATGGACATTCCTCGGTCTGTTCTGAACTTCCGGTTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS GCA 90 bp | ACAAAGGCAAATCTCCCCCTGGTTAGCAAAGCTGGACCTAACGGTTaGCGGGATACACTCCTCCAGGTTGGCATCCTCAAAGATGATAGC | + |
|
Preference number: 5 (lower is better) Translates to: TKANLPLVSKAGPNG*RDTLLQVGILKDDS Trigger: GCTATCATCTTTGAGGATGCCAACCTGGAGGAGTGTATCCCGGCAACCGTTAGGTCCAGCTTTGCTAACCAGGGGGAGATTTGCCTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CAA 90 bp | GCTCAGGCAATTAGCAGTCAAAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCACGTGAGGGTTTTCCCTaGGTCTTTAGATTCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AQAISSQSWVVAMGLRGSREGFP*VFRFCL Trigger: CAGGCAGAATCTAAAGACCAAGGGAAAACCCTCACG...TGAGCCTCTCAGCCCCATAGCCACTACCCAACTTTGACTGCTAATTGCCTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CAA 90 bp | AGTCAAAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCATCTTCAAAGCTTTGTGATACGTGGTGCAGGTaGGAGGAAGCGAAGAACCGG | + |
|
Preference number: 5 (lower is better) Translates to: SQSWVVAMGLRGSSSKLCDTWCR*EEAKNR Trigger: CCGGTTCTTCGCTTCCTCCAACCTGCACCACGTATC...ACAAAGCTTTGAAGATGAGCCTCTCAGCCCCATAGCCACTACCCAACTTTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CAA 90 bp | AGTCAAAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCATCTTCAAAGCTTTGTGTCATCTCACTGGGCTaGGCTATCACGGTATTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SQSWVVAMGLRGSSSKLCVISLG*AITVFP Trigger: TGGGAATACCGTGATAGCCAAGCCCAGTGAGATGAC...ACAAAGCTTTGAAGATGAGCCTCTCAGCCCCATAGCCACTACCCAACTTTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS TCA 90 bp | ACACAAGGGCTTCACCAACCCTCGGCCCTGTTCCAAACACAATGTTaGTCACACCTGGTGGGACACCTGCTTTATCCAAGAGTTTACAAA | + |
|
Preference number: 5 (lower is better) Translates to: TQGLHQPSALFQTQC*SHLVGHLLYPRVYK Trigger: TTTGTAAACTCTTGGATAAAGCAGGTGTCCCACCAGGTGTGATCAACATTGTGTTTGGAACAGGGCCGAGGGTTGGTGAAGCCCTTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CAA 90 bp | AAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCATCTTCAAAGCTTTGTCAAGGTTCTCCAAATGTGCTTaGCTTATCAGAGCACCCATG | + |
|
Preference number: 5 (lower is better) Translates to: KLGSGYGAERLIFKALSRFSKCA*LIRAPM Trigger: CATGGGTGCTCTGATAAGCAAAGCACATTTGGAGAA...CCTTGACAAAGCTTTGAAGATGAGCCTCTCAGCCCCATAGCCACTACCCAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS TCA 90 bp | AGAGAATCCGGGCACCCTCAGTCTGAGCTTTCAAGACATAACTTCTaGCTTTCTCCAAATGTGCTTTGCTTATCAGAGCACCCATGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RESGHPQSELSRHNF*LSPNVLCLSEHPCW Trigger: CCAACATGGGTGCTCTGATAAGCAAAGCACATTTGGAGAAAGTCAGAAGTTATGTCTTGAAAGCTCAGACTGAGGGTGCCCGGATTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CCA 90 bp | CGTAATCACTTCCTCTTCACTATCAAACGGAACAACACACGTCACTaGACCAAAGATCTCTTCCGTCATGCAGCGGGACTCATCCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: RNHFLFTIKRNNTRH*TKDLFRHAAGLILN Trigger: ATTAAGGATGAGTCCCGCTGCATGACGGAAGAGATCTTTGGTCCAGTGACGTGTGTTGTTCCGTTTGATAGTGAAGAGGAAGTGATTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CAA 90 bp | GCTCAGGCAATTAGCAGTCAAAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCAAATAAACTTCCCCTGTaGATGGATCGTAAGAATCTA | + |
|
Preference number: 5 (lower is better) Translates to: AQAISSQSWVVAMGLRGSNKLPL*MDRKNL Trigger: TAGATTCTTACGATCCATCAACAGGGGAAGTTTATT...TGAGCCTCTCAGCCCCATAGCCACTACCCAACTTTGACTGCTAATTGCCTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CAA 90 bp | TTGTGTTATATACCACCAGGTCAGTCTTTTGCACTGATGCTGGGATCTGAGCTCGTTCCAAACACAATGTaGATCACACCTGGTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LCYIPPGQSFALMLGSELVPNTM*ITPGGT Trigger: TGTCCCACCAGGTGTGATCAACATTGTGTTTGGAAC...GAGCTCAGATCCCAGCATCAGTGCAAAAGACTGACCTGGTGGTATATAACACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CAA 90 bp | AAGTTGGGTAGTGGCTATGGGGCTGAGAGGCTCATCTTCAAAGCTTTGTCAAGGAAGTCATATGAGTCCTaGGCTCCTTCTCTTCCTATT | + |
|
Preference number: 5 (lower is better) Translates to: KLGSGYGAERLIFKALSRKSYES*APSLPI Trigger: AATAGGAAGAGAAGGAGCCAAGGACTCATATGACTT...CCTTGACAAAGCTTTGAAGATGAGCCTCTCAGCCCCATAGCCACTACCCAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CAA 90 bp | TTCCCTTACTTGTATCAGACATATTTAGTAAGATCTATCGTGTGTGACGCTCACATACACTCCTCCAGGTaGGCATCCTCAAAGATGATA | + |
|
Preference number: 5 (lower is better) Translates to: FPYLYQTYLVRSIVCDAHIHSSR*ASSKMI Trigger: TATCATCTTTGAGGATGCCAACCTGGAGGAGTGTAT...GTGAGCGTCACACACGATAGATCTTACTAAATATGTCTGATACAAGTAAGGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS-3UTR CAA 90 bp | TTCCCTTACTTGTATCAGACATATTTAGTAAGATCTATCGTGTGTGACGCTCACCTTCTTTCCCACTGTTaGGAACTTTGCAATAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: FPYLYQTYLVRSIVCDAHLLSHC*ELCNKL Trigger: AAGTTTATTGCAAAGTTCCAAACAGTGGGAAAGAAG...GTGAGCGTCACACACGATAGATCTTACTAAATATGTCTGATACAAGTAAGGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS TCA 72 bp | TGGCTCCCAGTGAACGAGATCAAGGGTACCTCGGGGTaGGACACAAGGGCTTCACCAACCCTCGGCCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: WLPVNEIKGTSG*DTRASPTLGPV Trigger: AACAGGGCCGAGGGTTGGTGAAGCCCTTGTGTCTCACCCCGAGGTACCCTTGATCTCGTTCACTGGGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CCA 72 bp | CGTGGGAAGCATGAAGTAGCCTGCCTGGTTCCTGAGTaGAAGGCTCAGCTGGTCCACACCCTCACCACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RGKHEVACLVPE*KAQLVHTLTTE Trigger: CTCTGTGGTGAGGGTGTGGACCAGCTGAGCCTTCCACTCAGGAACCAGGCAGGCTACTTCATGCTTCCCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CCA 72 bp | CAGCCCAGGTGGCTCATCTGTGTGCACTCCGATACGTaGTGCAGGTTGGAGGAAGCGAAGAACCGGAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: QPRWLICVHSDT*CRLEEAKNRKF Trigger: GAACTTCCGGTTCTTCGCTTCCTCCAACCTGCACCACGTATCGGAGTGCACACAGATGAGCCACCTGGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CCA 72 bp | CACTGGGCTTGGCTATCACGGTATTCCCAGCAGCGATaGCCGGAGCTATCTTCCAGGTCAGCAGGTAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: HWAWLSRYSQQR*PELSSRSAGRV Trigger: CACTCTACCTGCTGACCTGGAAGATAGCTCCGGCCATCGCTGCTGGGAATACCGTGATAGCCAAGCCCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CCA 72 bp | TTCTTGCCTCCCAGCTCCAGGGAAAGCTTCTTGCAGTaGGGGGCACTGAGCTGGGTAATCCGTTCAGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FLPPSSRESFLQ*GALSWVIRSAV Trigger: CACAGCTGAACGGATTACCCAGCTCAGTGCCCCCCACTGCAAGAAGCTTTCCCTGGAGCTGGGAGGCAAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CAA 90 bp | CAGCCCAGGTGGCTCATCTGTGTGCACTCCGATACGTGGTGCAGGTaGGAGGAAGCGAAGAACCGGAAGTTCAGAACAGACCGAGGAATG | + |
|
Preference number: 6 (lower is better) Translates to: QPRWLICVHSDTWCR*EEAKNRKFRTDRGM Trigger: CATTCCTCGGTCTGTTCTGAACTTCCGGTTCTTCGCTTCCTCCAACCTGCACCACGTATCGGAGTGCACACAGATGAGCCACCTGGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS GCA 72 bp | CGGTGTAATGCATACAGCCCAGGTGGCTCATCTGTGTaGACTCCGATACGTGGTGCAGGTTGGAGGAAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RCNAYSPGGSSV*TPIRGAGWRKR Trigger: TCGCTTCCTCCAACCTGCACCACGTATCGGAGTGCACACAGATGAGCCACCTGGGCTGTATGCATTACACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CAA 72 bp | AGCTTCTTAGCTACCCTGTGGATGCGCCCCACATCCTaGGACCACACTGTGGCTGCCAGCCCGTATCTAACA | + |
|
Preference number: 6 (lower is better) Translates to: SFLATLWMRPTS*DHTVAASPYLT Trigger: TGTTAGATACGGGCTGGCAGCCACAGTGTGGTCCAAGGATGTGGGGCGCATCCACAGGGTAGCTAAGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS TCA 72 bp | TCCAGGTCAGCAGGTAGAGTGGTAAATTCCAAGGGCTaGTCAAACCAGCAATTCCCACCGGGGTGCGAACGG | + |
|
Preference number: 6 (lower is better) Translates to: SRSAGRVVNSKG*SNQQFPPGCER Trigger: CCGTTCGCACCCCGGTGGGAATTGCTGGTTTGATCAGCCCTTGGAATTTACCACTCTACCTGCTGACCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS GCA 72 bp | GTGGATGCGCCCCACATCCTTGGACCACACTGTGGCTaGCAGCCCGTATCTAACACTGTTAGCTCTCGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: VDAPHILGPHCG*QPVSNTVSSRN Trigger: ATTACGAGAGCTAACAGTGTTAGATACGGGCTGGCAGCCACAGTGTGGTCCAAGGATGTGGGGCGCATCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS GCA 72 bp | AATCTCCCCCTGGTTAGCAAAGCTGGACCTAACGGTTaGCGGGATACACTCCTCCAGGTTGGCATCCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: NLPLVSKAGPNG*RDTLLQVGILK Trigger: TTTGAGGATGCCAACCTGGAGGAGTGTATCCCGGCAACCGTTAGGTCCAGCTTTGCTAACCAGGGGGAGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS GCA 72 bp | AATGTCTGTTATCACCGTGGGAAGCATGAAGTAGCCTaGCTGGTTCCTGAGTGGAAGGCTCAGCTGGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: NVCYHRGKHEVA*LVPEWKAQLVH Trigger: GTGGACCAGCTGAGCCTTCCACTCAGGAACCAGGCAGGCTACTTCATGCTTCCCACGGTGATAACAGACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CAA 90 bp | TTAGCAAAGCTGGACCTAACGGTTGCCGGGATACACTCCTCCAGGTaGGCATCCTCAAAGATGATAGCAGGATTCTTGCCTCCCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LAKLDLTVAGIHSSR*ASSKMIAGFLPPSS Trigger: GGAGCTGGGAGGCAAGAATCCTGCTATCATCTTTGAGGATGCCAACCTGGAGGAGTGTATCCCGGCAACCGTTAGGTCCAGCTTTGCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CAA 72 bp | GCTTCACCAACCCTCGGCCCTGTTCCAAACACAATGTaGATCACACCTGGTGGGACACCTGCTTTATCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: ASPTLGPVPNTM*ITPGGTPALSK Trigger: CTTGGATAAAGCAGGTGTCCCACCAGGTGTGATCAACATTGTGTTTGGAACAGGGCCGAGGGTTGGTGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CAA 72 bp | TCCAGGTTGGCATCCTCAAAGATGATAGCAGGATTCTaGCCTCCCAGCTCCAGGGAAAGCTTCTTGCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SRLASSKMIAGF*PPSSRESFLQW Trigger: CCACTGCAAGAAGCTTTCCCTGGAGCTGGGAGGCAAGAATCCTGCTATCATCTTTGAGGATGCCAACCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CAA 72 bp | CTGGACCTAACGGTTGCCGGGATACACTCCTCCAGGTaGGCATCCTCAAAGATGATAGCAGGATTCTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LDLTVAGIHSSR*ASSKMIAGFLP Trigger: AGGCAAGAATCCTGCTATCATCTTTGAGGATGCCAACCTGGAGGAGTGTATCCCGGCAACCGTTAGGTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS TCA 72 bp | CTTCACCAACCCTCGGCCCTGTTCCAAACACAATGTTaGTCACACCTGGTGGGACACCTGCTTTATCCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LHQPSALFQTQC*SHLVGHLLYPR Trigger: TCTTGGATAAAGCAGGTGTCCCACCAGGTGTGATCAACATTGTGTTTGGAACAGGGCCGAGGGTTGGTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CAA 90 bp | GACACAAGGGCTTCACCAACCCTCGGCCCTGTTCCAAACACAATGTaGATCACACCTGGTGGGACACCTGCTTTATCCAAGAGTTTACAA | + |
|
Preference number: 6 (lower is better) Translates to: DTRASPTLGPVPNTM*ITPGGTPALSKSLQ Trigger: TTGTAAACTCTTGGATAAAGCAGGTGTCCCACCAGGTGTGATCAACATTGTGTTTGGAACAGGGCCGAGGGTTGGTGAAGCCCTTGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS TCA 72 bp | AGCGTGAGGGTTTTCCCTTGGTCTTTAGATTCTGCCTaGGCTAACTCCTCCAGAGACTGCTCCAGTACATCA | + |
|
Preference number: 6 (lower is better) Translates to: SVRVFPWSLDSA*ANSSRDCSSTS Trigger: TGATGTACTGGAGCAGTCTCTGGAGGAGTTAGCTCAGGCAGAATCTAAAGACCAAGGGAAAACCCTCACGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS GCA 72 bp | GAAGTTCAGAACAGACCGAGGAATGTCCATGGTCCTTaGCAGCGTGAGGGTTTTCCCTTGGTCTTTAGATTC | + |
|
Preference number: 6 (lower is better) Translates to: EVQNRPRNVHGP*QREGFPLVFRF Trigger: GAATCTAAAGACCAAGGGAAAACCCTCACGCTGGCAAGGACCATGGACATTCCTCGGTCTGTTCTGAACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CCA 72 bp | TTCCTCTTCACTATCAAACGGAACAACACACGTCACTaGACCAAAGATCTCTTCCGTCATGCAGCGGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: FLFTIKRNNTRH*TKDLFRHAAGL Trigger: GAGTCCCGCTGCATGACGGAAGAGATCTTTGGTCCAGTGACGTGTGTTGTTCCGTTTGATAGTGAAGAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CCA 72 bp | ACAAAGATTCTACTGGTACAAAGGCAAATCTCCCCCTaGTTAGCAAAGCTGGACCTAACGGTTGCCGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: TKILLVQRQISP*LAKLDLTVAGI Trigger: TATCCCGGCAACCGTTAGGTCCAGCTTTGCTAACCAGGGGGAGATTTGCCTTTGTACCAGTAGAATCTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CAA 90 bp | CTCTGGCAGCCTCCACGGCAGCTTCAATCTCTTCTTTCCCACTGTTaGGAACTTTGCAATAAACTTCCCCTGTTGATGGATCGTAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LWQPPRQLQSLLSHC*ELCNKLPLLMDRKN Trigger: ATTCTTACGATCCATCAACAGGGGAAGTTTATTGCAAAGTTCCAAACAGTGGGAAAGAAGAGATTGAAGCTGCCGTGGAGGCTGCCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CCA 72 bp | CCTCGGCCCTGTTCCAAACACAATGTTGATCACACCTaGTGGGACACCTGCTTTATCCAAGAGTTTACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: PRPCSKHNVDHT*WDTCFIQEFTK Trigger: TTTTGTAAACTCTTGGATAAAGCAGGTGTCCCACCAGGTGTGATCAACATTGTGTTTGGAACAGGGCCGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CCA 72 bp | TCTCCAAATGTGCTTTGCTTATCAGAGCACCCATGTTaGCTGATGGGTCAGAAGGAACACCAACTTTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SPNVLCLSEHPC*LMGQKEHQLST Trigger: AGTGGAAAGTTGGTGTTCCTTCTGACCCATCAGCCAACATGGGTGCTCTGATAAGCAAAGCACATTTGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CAA 72 bp | TTCTCCAAATGTGCTTTGCTTATCAGAGCACCCATGTaGGCTGATGGGTCAGAAGGAACACCAACTTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: FSKCALLIRAPM*ADGSEGTPTFH Trigger: GTGGAAAGTTGGTGTTCCTTCTGACCCATCAGCCAACATGGGTGCTCTGATAAGCAAAGCACATTTGGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS TCA 72 bp | CAAATGTGCTTTGCTTATCAGAGCACCCATGTTGGCTaGTGGGTCAGAAGGAACACCAACTTTCCACTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: QMCFAYQSTHVG*WVRRNTNFPLS Trigger: AGAAAGTGGAAAGTTGGTGTTCCTTCTGACCCATCAGCCAACATGGGTGCTCTGATAAGCAAAGCACATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CAA 72 bp | CCTCCACGGCAGCTTCAATCTCTTCTTTCCCACTGTTaGGAACTTTGCAATAAACTTCCCCTGTTGATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PPRQLQSLLSHC*ELCNKLPLLMD Trigger: ATCCATCAACAGGGGAAGTTTATTGCAAAGTTCCAAACAGTGGGAAAGAAGAGATTGAAGCTGCCGTGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CAA 72 bp | TCCCACTGTTTGGAACTTTGCAATAAACTTCCCCTGTaGATGGATCGTAAGAATCTATATATGAGTTACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SHCLELCNKLPL*MDRKNLYMSYR Trigger: CCTGTAACTCATATATAGATTCTTACGATCCATCAACAGGGGAAGTTTATTGCAAAGTTCCAAACAGTGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||
| CDS CAA 90 bp | TCTCTTCTTTCCCACTGTTTGGAACTTTGCAATAAACTTCCCCTGTaGATGGATCGTAAGAATCTATATATGAGTTACAGGGTAAAAACT | + |
|
Preference number: 6 (lower is better) Translates to: SLLSHCLELCNKLPL*MDRKNLYMSYRVKT Trigger: AGTTTTTACCCTGTAACTCATATATAGATTCTTACGATCCATCAACAGGGGAAGTTTATTGCAAAGTTCCAAACAGTGGGAAAGAAGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042699.14 |
||