Pregenerated sensors for ALDH7A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053644Ensembl transcript IDs: ENSMUST00000066208.13, ENSMUST00000172734.8, ENSMUST00000174518.8, ENSMUST00000174704.8
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTTCTCCAGGAGCCCGATGTGGCAGGAGCAGGCCCAGTGGTGACTaGTACACAGAAGTACAGAGCAACGGCACCACAGGAGAGCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: VSPGARCGRSRPSGD*YTEVQSNGTTGEQG Trigger: TCCCTGCTCTCCTGTGGTGCCGTTGCTCTGTACTTCTGTGTAGCAGTCACCACTGGGCCTGCTCCTGCCACATCGGGCTCCTGGAGAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR TCA 90 bp | ACCTTCCCAGAGGAGAAACCCATGAGCAGCTGCAGAAGCCTGAGGTaGCTCGGGCATCCAGATGTGCTTTCACGAGCAACTTCAGTCCCT | + |
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Preference number: 1 (lower is better) Translates to: TFPEEKPMSSCRSLR*LGHPDVLSRATSVP Trigger: AGGGACTGAAGTTGCTCGTGAAAGCACATCTGGATGCCCGAGTCACCTCAGGCTTCTGCAGCTGCTCATGGGTTTCTCCTCTGGGAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR GCA 90 bp | GGGCTAGAACTCACGATCCTCTCAGACGCTGGGATCTCAGGTGTGTaGCACTGTGCCCATTTATGTGGTATGGAGGACACTCCATACTCC | + |
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Preference number: 1 (lower is better) Translates to: GLELTILSDAGISGV*HCAHLCGMEDTPYS Trigger: GGAGTATGGAGTGTCCTCCATACCACATAAATGGGCACAGTGGCACACACCTGAGATCCCAGCGTCTGAGAGGATCGTGAGTTCTAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR GCA 90 bp | CTCCCCTTCAACCCCTGCCAGGACGGGACCATGAGGATTCAGCACTaGTTAGAAGACATTTCTCCACTGCAAAGACTTCTTCCTTCCTAT | + |
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Preference number: 1 (lower is better) Translates to: LPFNPCQDGTMRIQH*LEDISPLQRLLPSY Trigger: ATAGGAAGGAAGAAGTCTTTGCAGTGGAGAAATGTCTTCTAAGCAGTGCTGAATCCTCATGGTCCCGTCCTGGCAGGGGTTGAAGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR TCA 90 bp | AGCATTATCTTTGTTGTGGTGGTACTGAGATTTGAACCCAGGGGTTaGCACATCCCAGCAACCATTCACAACAGTGTTAAGTTCCTCACC | + |
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Preference number: 1 (lower is better) Translates to: SIIFVVVVLRFEPRG*HIPATIHNSVKFLT Trigger: GGTGAGGAACTTAACACTGTTGTGAATGGTTGCTGGGATGTGTCAACCCCTGGGTTCAAATCTCAGTACCACCACAACAAAGATAATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR TCA 90 bp | GACACTGGACAGCTCATTGCATTCGGTGTGTGTTATGAAAAAGAGTaGTGTGTCCTTGTGGTAAGCAATGATTCAGAGCCCATCTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: DTGQLIAFGVCYEKE*CVLVVSNDSEPISR Trigger: TCTGGAGATGGGCTCTGAATCATTGCTTACCACAAGGACACATCACTCTTTTTCATAACACACACCGAATGCAATGAGCTGTCCAGTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR TCA 90 bp | TCAGTCCCCCAGATTTCTTACTATTGTCCAAATCTTTCCACACCATaGCGACTCATGAGGCCTACAATGTCCTATTCCCTAAGGGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: SVPQISYYCPNLSTP*RLMRPTMSYSLRVS Trigger: AGAAACCCTTAGGGAATAGGACATTGTAGGCCTCATGAGTCGTCATGGTGTGGAAAGATTTGGACAATAGTAAGAAATCTGGGGGACTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR TCA 90 bp | TCCAAAATTACATGTTCTCTTGCTTTAAAGAATAAAGCTGGGTGGTaGCACAGGGCTACAAACCCACGCTCTCACTGGCCAAAACCAGAA | + |
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Preference number: 1 (lower is better) Translates to: SKITCSLALKNKAGW*HRATNPRSHWPKPE Trigger: TTCTGGTTTTGGCCAGTGAGAGCGTGGGTTTGTAGCCCTGTGTCACCACCCAGCTTTATTCTTTAAAGCAAGAGAACATGTAATTTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR CCA 90 bp | CCTGCACATTTCTTTCTGGCTGACACAGTCAGGAGCAGTCTTAACTaGGTGAGCATTATTTTTAGAGCATTATCTTTGTTGTGGTGGTAC | + |
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Preference number: 1 (lower is better) Translates to: PAHFFLADTVRSSLN*VSIIFRALSLLWWY Trigger: GTACCACCACAACAAAGATAATGCTCTAAAAATAATGCTCACCCAGTTAAGACTGCTCCTGACTGTGTCAGCCAGAAAGAAATGTGCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR CCA 90 bp | CATTTCTCCACTGCAAAGACTTCTTCCTTCCTATTGCATTTTCCATaGCCCCAACCTCCTATGATGGCATGTACTTCACTAAGAAATGAT | + |
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Preference number: 1 (lower is better) Translates to: HFSTAKTSSFLLHFP*PQPPMMACTSLRND Trigger: ATCATTTCTTAGTGAAGTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAAGGAAGAAGTCTTTGCAGTGGAGAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGGTTGGGATCAGATACAGGTGGGTTGGAGTTCAAGGCCAGCCAGGGTTACACACATGAAACTGTGCTaGGGTCCCCAGCATGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GGWDQIQVGWSSRPARVTHMKLC*GPQHVG Trigger: CCCCACATGCTGGGGACCTCAGCACAGTTTCATGTG...TGTAACCCTGGCTGGCCTTGAACTCCAACCCACCTGTATCTGATCCCAACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGGTTGGGATCAGATACAGGTGGGTTGGAGTTCAAGGCCAGCCAGGGTTACATGCAGAAGCCTGAGGTaGCTCGGGCATCCAGATGTG | + |
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Preference number: 2 (lower is better) Translates to: GGWDQIQVGWSSRPARVTCRSLR*LGHPDV Trigger: CACATCTGGATGCCCGAGTCACCTCAGGCTTCTGCA...TGTAACCCTGGCTGGCCTTGAACTCCAACCCACCTGTATCTGATCCCAACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCACAATGGTGGGTTCCACGTAATTGCCAGGGTGGTCCATGACCTTGCCCCCGTCCATAGAGGATATTaGGGTCCCAGGGGTTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: GHNGGFHVIARVVHDLAPVHRGY*GPRGSQ Trigger: TTGGGAACCCCTGGGACCCCAATATCCTCTATGGAC...GGGGGCAAGGTCATGGACCACCCTGGCAATTACGTGGAACCCACCATTGTGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174704.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCACAATGGTGGGTTCCACGTAATTGCCAGGGTGGTCCATGACCTTGCCCCCGGGTCTGGGAATCACTaGAGATTAGACACTGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: GHNGGFHVIARVVHDLAPGSGNH*RLDTAV Trigger: GACAGCAGTGTCTAATCTCCAGTGATTCCCAGACCC...GGGGGCAAGGTCATGGACCACCCTGGCAATTACGTGGAACCCACCATTGTGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174704.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTTGGGATCAGATACAGGTGGGTTGGAGTTCAAGGCCAGCCAGGGTTACACTGCACATTTCTTTCTaGCTGACACAGTCAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: GGWDQIQVGWSSRPARVTLHISF*LTQSGA Trigger: TGCTCCTGACTGTGTCAGCCAGAAAGAAATGTGCAG...TGTAACCCTGGCTGGCCTTGAACTCCAACCCACCTGTATCTGATCCCAACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR CAA 90 bp | TCACTGTTCTCACCCAAACACCCAGGTCCATCATCAGTATCTGGCTaGGTTCGTAGCGATGGCAAGGACATGACCAGGTCAACGCTACCT | + |
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Preference number: 2 (lower is better) Translates to: SLFSPKHPGPSSVSG*VRSDGKDMTRSTLP Trigger: AGGTAGCGTTGACCTGGTCATGTCCTTGCCATCGCTACGAACCAAGCCAGATACTGATGATGGACCTGGGTGTTTGGGTGAGAACAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGCTGGAGATGGAATCCCAGGCATTGAGTGGCAAGCAGCCTACCTAACCAAGTCGGGCATCCAGATGTaGTTTCACGAGCAACTTCAG | + |
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Preference number: 2 (lower is better) Translates to: SAGDGIPGIEWQAAYLTKSGIQM*FHEQLQ Trigger: CTGAAGTTGCTCGTGAAAGCACATCTGGATGCCCGA...CTTGGTTAGGTAGGCTGCTTGCCACTCAATGCCTGGGATTCCATCTCCAGCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTTGGGATCAGATACAGGTGGGTTGGAGTTCAAGGCCAGCCAGGGTTACACTGTGCCCATTTATGTaGTATGGAGGACACTCCATA | + |
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Preference number: 2 (lower is better) Translates to: GGWDQIQVGWSSRPARVTLCPFM*YGGHSI Trigger: TATGGAGTGTCCTCCATACCACATAAATGGGCACAG...TGTAACCCTGGCTGGCCTTGAACTCCAACCCACCTGTATCTGATCCCAACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGCTCCTTGTCACCTTCAGAAGACTGTGCATCAATGTCACTGTCATGTGTGGAACCCACGCTCTCACTaGCCAAAACCAGAAGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: LAPCHLQKTVHQCHCHVWNPRSH*PKPEAC Trigger: GCAGGCTTCTGGTTTTGGCCAGTGAGAGCGTGGGTT...CCACACATGACAGTGACATTGATGCACAGTCTTCTGAAGGTGACAAGGAGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR TCA 90 bp | AACACCCAGGTCCATCATCAGTATCTGGCTTGGTTCGTAGCGATGGCAAGGACATTGTTGTGGTGGTACTaGGATTTGAACCCAGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: NTQVHHQYLAWFVAMARTLLWWY*DLNPGV Trigger: AACCCCTGGGTTCAAATCTCAGTACCACCACAACAA...TGTCCTTGCCATCGCTACGAACCAAGCCAGATACTGATGATGGACCTGGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAACACCCAGGTCCATCATCAGTATCTGGCTTGGTTCGTAGCGATGGCAAGGAATTTAGTGCAGTGCTaGAGATGGAATCCCAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: PNTQVHHQYLAWFVAMARNLVQC*RWNPRH Trigger: ATGCCTGGGATTCCATCTCCAGCACTGCACTAAATT...CCTTGCCATCGCTACGAACCAAGCCAGATACTGATGATGGACCTGGGTGTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR TCA 90 bp | CTAATGCAGGCATCAGACACTGGACAGCTCATTGCATTCGGTGTGTGTTATGAATTAGCCTCTCAGCAGTaGCCTTCCCAGAGGAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: LMQASDTGQLIAFGVCYELASQQ*PSQRRN Trigger: GTTTCTCCTCTGGGAAGGTCACTGCTGAGAGGCTAA...TTCATAACACACACCGAATGCAATGAGCTGTCCAGTGTCTGATGCCTGCATTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR CCA 90 bp | GACTTCTTCCTTCCTATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGGGGTCTGGGAATCACTaGAGATTAGACACTGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: DFFLPIAFSMAPTSYDGMGSGNH*RLDTAV Trigger: GACAGCAGTGTCTAATCTCCAGTGATTCCCAGACCC...CATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAAGGAAGAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGAAGACTGTGCATCAATGTCACTGTCATGTGTGGCCACATCATCATAGCAATAAAGCTGGGTGGTaGCACAGGGCTACAAACCCA | + |
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Preference number: 2 (lower is better) Translates to: LQKTVHQCHCHVWPHHHSNKAGW*HRATNP Trigger: TGGGTTTGTAGCCCTGTGTCACCACCCAGCTTTATT...GCTATGATGATGTGGCCACACATGACAGTGACATTGATGCACAGTCTTCTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR TCA 90 bp | CCACACTGTCAGTCCCCCAGATTTCTTACTATTGTCCAAATCTTTCCACACCATTGCAAATCATGCACATaGAACTGTGCTGAGGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: PHCQSPRFLTIVQIFPHHCKSCT*NCAEVP Trigger: GGGGACCTCAGCACAGTTTCATGTGCATGATTTGCA...ATGGTGTGGAAAGATTTGGACAATAGTAAGAAATCTGGGGGACTGACAGTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR GCA 90 bp | TCTACCCCTGCACATTTCTTTCTGGCTGACACAGTCAGGAGCAGTCTTAACTGGATGAGGATTCAGCACTaGTTAGAAGACATTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: STPAHFFLADTVRSSLNWMRIQH*LEDISP Trigger: TGGAGAAATGTCTTCTAAGCAGTGCTGAATCCTCAT...CCAGTTAAGACTGCTCCTGACTGTGTCAGCCAGAAAGAAATGTGCAGGGGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR CCA 90 bp | ATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACTTCACTAAGAAAGGGTCTGGGAATCACTaGAGATTAGACACTGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: IAFSMAPTSYDGMYFTKKGSGNH*RLDTAV Trigger: GACAGCAGTGTCTAATCTCCAGTGATTCCCAGACCC...TTTCTTAGTGAAGTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
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| 3UTR CAA 90 bp | CTGCTTAGAAGACATTTCTCCACTGCAAAGACTTCTTCCTTCCTATaGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACTTCA | + |
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Preference number: 2 (lower is better) Translates to: LLRRHFSTAKTSSFL*HFPWPQPPMMACTS Trigger: TGAAGTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAAGGAAGAAGTCTTTGCAGTGGAGAAATGTCTTCTAAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGAAGACTGTGCATCAATGTCACTGTCATGTGTGGCCACATCATCATAGCATTCGGTGTGTGTTATaGAAAAGAGTGATGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LQKTVHQCHCHVWPHHHSIRCVL*KRVMCP Trigger: AGGACACATCACTCTTTTTCATAACACACACCGAAT...GCTATGATGATGTGGCCACACATGACAGTGACATTGATGCACAGTCTTCTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR CCA 90 bp | CCACACTGTCAGTCCCCCAGATTTCTTACTATTGTCCAAATCTTTCCACACCATAGGAGCAGTCTTAACTaGGTGAGCATTATTTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: PHCQSPRFLTIVQIFPHHRSSLN*VSIIFR Trigger: TCTAAAAATAATGCTCACCCAGTTAAGACTGCTCCT...ATGGTGTGGAAAGATTTGGACAATAGTAAGAAATCTGGGGGACTGACAGTGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR CAA 90 bp | CACATAAAACTTAGGAAATTTCAAAGGGAACTTTCAGAATCGGCTTaGGCTAAGATTCTAGCTCCTTGTCACCTTCAGAAGACTGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: HIKLRKFQRELSESA*AKILAPCHLQKTVH Trigger: ATGCACAGTCTTCTGAAGGTGACAAGGAGCTAGAATCTTAGCCAAAGCCGATTCTGAAAGTTCCCTTTGAAATTTCCTAAGTTTTATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR TCA 72 bp | AGAGCAGGGACCGCTGGGCCCAGCACAGCTTCCCAGTaGGACCTTAGCCTCTCAGCAGTGACCTTCCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: RAGTAGPSTASQ*DLSLSAVTFPE Trigger: CTCTGGGAAGGTCACTGCTGAGAGGCTAAGGTCTCACTGGGAAGCTGTGCTGGGCCCAGCGGTCCCTGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR GCA 72 bp | GGAGCCCGATGTGGCAGGAGCAGGCCCAGTGGTGACTaGTACACAGAAGTACAGAGCAACGGCACCACAGGA | + |
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Preference number: 3 (lower is better) Translates to: GARCGRSRPSGD*YTEVQSNGTTG Trigger: TCCTGTGGTGCCGTTGCTCTGTACTTCTGTGTAGCAGTCACCACTGGGCCTGCTCCTGCCACATCGGGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR GCA 72 bp | CCTCTCAGACGCTGGGATCTCAGGTGTGTGCCACTGTaGCCATTTATGTGGTATGGAGGACACTCCATACTC | + |
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Preference number: 3 (lower is better) Translates to: PLRRWDLRCVPL*PFMWYGGHSIL Trigger: GAGTATGGAGTGTCCTCCATACCACATAAATGGGCACAGTGGCACACACCTGAGATCCCAGCGTCTGAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR GCA 72 bp | CTCACGATCCTCTCAGACGCTGGGATCTCAGGTGTGTaGCACTGTGCCCATTTATGTGGTATGGAGGACACT | + |
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Preference number: 3 (lower is better) Translates to: LTILSDAGISGV*HCAHLCGMEDT Trigger: AGTGTCCTCCATACCACATAAATGGGCACAGTGGCACACACCTGAGATCCCAGCGTCTGAGAGGATCGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR CAA 90 bp | GGGGGTTGGGATCAGATACAGGTGGGTTGGAGTTCAAGGCCAGCCAGGGTTACAACTTCTTCCTTCCTATaGCATTTTCCATGGCCCCAA | + |
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Preference number: 3 (lower is better) Translates to: GGWDQIQVGWSSRPARVTTSSFL*HFPWPQ Trigger: TTGGGGCCATGGAAAATGCAATAGGAAGGAAGAAGT...TGTAACCCTGGCTGGCCTTGAACTCCAACCCACCTGTATCTGATCCCAACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR CCA 72 bp | TCTCAGGTGTGTGCCACTGTGCCCATTTATGTGGTATaGAGGACACTCCATACTCCTGTTCATGATTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: SQVCATVPIYVV*RTLHTPVHDSP Trigger: TGGAGAATCATGAACAGGAGTATGGAGTGTCCTCCATACCACATAAATGGGCACAGTGGCACACACCTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR CAA 90 bp | TGCCAGGACGGGACCATGAGGATTCAGCACTGCTTAGAAGACATTTCTCCACTGCACCAAACCTATCTTTaGCTAAATGCAGCTAGGTTG | + |
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Preference number: 3 (lower is better) Translates to: CQDGTMRIQHCLEDISPLHQTYL*LNAARL Trigger: CAACCTAGCTGCATTTAGCAAAAGATAGGTTTGGTG...CAGTGGAGAAATGTCTTCTAAGCAGTGCTGAATCCTCATGGTCCCGTCCTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR TCA 72 bp | AATTTAGTGCAGTGCTGGAGATGGAATCCCAGGCATTaGGTGGCAAGCAGCCTACCTAACCAAGCTATATTC | + |
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Preference number: 3 (lower is better) Translates to: NLVQCWRWNPRH*VASSLPNQAIF Trigger: GAATATAGCTTGGTTAGGTAGGCTGCTTGCCACTCAATGCCTGGGATTCCATCTCCAGCACTGCACTAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR TCA 72 bp | GTGGGTTGGAGTTCAAGGCCAGCCAGGGTTACAGCATaGTCCAGACTGTATTTATGGTCTGTTTTGTTCATC | + |
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Preference number: 3 (lower is better) Translates to: VGWSSRPARVTA*SRLYLWSVLFI Trigger: GATGAACAAAACAGACCATAAATACAGTCTGGATCATGCTGTAACCCTGGCTGGCCTTGAACTCCAACCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR CCA 72 bp | GTTCCTCACCTCACCCAAAAATGGCCCATTGTCATTTaGAGCACTGCAAATCATGCACATGAAACTGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: VPHLTQKWPIVI*STANHAHETVL Trigger: CAGCACAGTTTCATGTGCATGATTTGCAGTGCTCCAAATGACAATGGGCCATTTTTGGGTGAGGTGAGGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR CAA 90 bp | GACTTCTTCCTTCCTATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGCACCAAACCTATCTTTaGCTAAATGCAGCTAGGTTG | + |
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Preference number: 3 (lower is better) Translates to: DFFLPIAFSMAPTSYDGMHQTYL*LNAARL Trigger: CAACCTAGCTGCATTTAGCAAAAGATAGGTTTGGTG...CATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAAGGAAGAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
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| 3UTR TCA 72 bp | CAGCTCATTGCATTCGGTGTGTGTTATGAAAAAGAGTaGTGTGTCCTTGTGGTAAGCAATGATTCAGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: QLIAFGVCYEKE*CVLVVSNDSEP Trigger: GGGCTCTGAATCATTGCTTACCACAAGGACACATCACTCTTTTTCATAACACACACCGAATGCAATGAGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR CAA 90 bp | AAGACTGTGCATCAATGTCACTGTCATGTGTGGCCACATCATCATAGCTCCTTACCAGATTTCTTACTATaGTCCAAATCTTTCCACACC | + |
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Preference number: 3 (lower is better) Translates to: KTVHQCHCHVWPHHHSSLPDFLL*SKSFHT Trigger: GGTGTGGAAAGATTTGGACAATAGTAAGAAATCTGG...TAAGGAGCTATGATGATGTGGCCACACATGACAGTGACATTGATGCACAGTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR-3UTR CAA 90 bp | AAGACTGTGCATCAATGTCACTGTCATGTGTGGCCACATCATCATAGCTCCTTAAAGTGTGAAGTATTTTaGAGCAAAATGAGCAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: KTVHQCHCHVWPHHHSSLKCEVF*SKMSSG Trigger: GCCACTGCTCATTTTGCTCAAAAATACTTCACACTT...TAAGGAGCTATGATGATGTGGCCACACATGACAGTGACATTGATGCACAGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR TCA 72 bp | CAGATTTCTTACTATTGTCCAAATCTTTCCACACCATaGCGACTCATGAGGCCTACAATGTCCTATTCCCTA | + |
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Preference number: 3 (lower is better) Translates to: QISYYCPNLSTP*RLMRPTMSYSL Trigger: TAGGGAATAGGACATTGTAGGCCTCATGAGTCGTCATGGTGTGGAAAGATTTGGACAATAGTAAGAAATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| 3UTR CCA 72 bp | CTTCAGAAGACTGTGCATCAATGTCACTGTCATGTGTaGCCACATCATCATAGCTCCTTAAACATTTATTTG | + |
|
Preference number: 3 (lower is better) Translates to: LQKTVHQCHCHV*PHHHSSLNIYL Trigger: CAAATAAATGTTTAAGGAGCTATGATGATGTGGCCACACATGACAGTGACATTGATGCACAGTCTTCTGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| CDS-3UTR TCA 90 bp | GGTCACAATGGTGGGTTCCACGTAATTGCCAGGGTGGTCCATGACCTTGCCCCCCCCTCCTTCCCCACCTaGGTGCTCCCAGTGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GHNGGFHVIARVVHDLAPPSFPT*VLPVKD Trigger: GTCCTTCACTGGGAGCACTCAGGTGGGGAAGGAGGG...GGGGGCAAGGTCATGGACCACCCTGGCAATTACGTGGAACCCACCATTGTGACC 61% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174704.8 |
||
| CDS-3UTR GCA 90 bp | GGTCACAATGGTGGGTTCCACGTAATTGCCAGGGTGGTCCATGACCTTGCCCCCCTGGTCTTCACAGACTaGACACAGAGCCTGCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GHNGGFHVIARVVHDLAPLVFTD*TQSLRG Trigger: GCCCCGCAGGCTCTGTGTGCAGTCTGTGAAGACCAG...GGGGGCAAGGTCATGGACCACCCTGGCAATTACGTGGAACCCACCATTGTGACC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174704.8 |
||
| 3UTR CAA 72 bp | GGGCGAGGGTGGGGGTTGGGATCAGATACAGGTGGGTaGGAGTTCAAGGCCAGCCAGGGTTACAGCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: GRGWGLGSDTGG*EFKASQGYSMI Trigger: GATCATGCTGTAACCCTGGCTGGCCTTGAACTCCAACCCACCTGTATCTGATCCCAACCCCCACCCTCGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTTCTCCAGGAGCCCGATGTGGCAGGAGCAGGCCCAGTGGTGACTGCTACACATAGTCCTTCAGGCTaGCCTGTCGGACTCTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GFLQEPDVAGAGPVVTATHSPSG*PVGLLL Trigger: TAGCAAGAGTCCGACAGGCCAGCCTGAAGGACTATG...TGTAGCAGTCACCACTGGGCCTGCTCCTGCCACATCGGGCTCCTGGAGAAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| CDS-3UTR TCA 90 bp | CCAAACACCCAGGTCCATCATCAGTATCTGGCTTGGTTCGTAGCGATGGCAAGGTGCCAGGGTGGTCCATaGCCTTGCCCCCATAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: PNTQVHHQYLAWFVAMARCQGGP*PCPHRP Trigger: TGGTCTATGGGGGCAAGGTCATGGACCACCCTGGCA...CCTTGCCATCGCTACGAACCAAGCCAGATACTGATGATGGACCTGGGTGTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| CDS-3UTR CCA 90 bp | GGTCACAATGGTGGGTTCCACGTAATTGCCAGGGTGGTCCATGACCTTGCCCCCAAACCAGGGAACAAATaGCACCGGGCAGCAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GHNGGFHVIARVVHDLAPKPGNK*HRAAGC Trigger: ACAACCTGCTGCCCGGTGCCATTTGTTCCCTGGTTT...GGGGGCAAGGTCATGGACCACCCTGGCAATTACGTGGAACCCACCATTGTGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174704.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGTATGGAGCGGTCCATAGAGGATATTGGGGTCCCAGGGGTTCCCAACACGCTCTGGCCATCGTTGTaGCGATATCTGCTCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FGMERSIEDIGVPGVPNTLWPSL*RYLLHH Trigger: GTGGTGGAGCAGATATCGGCACAACGATGGCCAGAG...CGTGTTGGGAACCCCTGGGACCCCAATATCCTCTATGGACCGCTCCATACCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174704.8 |
||
| CDS-3UTR CCA 90 bp | GGTCACAATGGTGGGTTCCACGTAATTGCCAGGGTGGTCCATGACCTTGCCCCCATTTCGATGAGAGCATaGCCGGGTCTTTCAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GHNGGFHVIARVVHDLAPISMRA*PGLSEG Trigger: GCCTTCTGAAAGACCCGGCCATGCTCTCATCGAAAT...GGGGGCAAGGTCATGGACCACCCTGGCAATTACGTGGAACCCACCATTGTGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174704.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGTATGGAGCGGTCCATAGAGGATATTGGGGTCCCAGGGGTTCCCAACACGCATAGTCCTTCAGGCTaGCCTGTCGGACTCTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FGMERSIEDIGVPGVPNTHSPSG*PVGLLL Trigger: TAGCAAGAGTCCGACAGGCCAGCCTGAAGGACTATG...CGTGTTGGGAACCCCTGGGACCCCAATATCCTCTATGGACCGCTCCATACCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174704.8 |
||
| CDS-3UTR CCA 90 bp | CCAAACACCCAGGTCCATCATCAGTATCTGGCTTGGTTCGTAGCGATGGCAAGGAAACCAGGGAACAAATaGCACCGGGCAGCAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PNTQVHHQYLAWFVAMARKPGNK*HRAAGC Trigger: ACAACCTGCTGCCCGGTGCCATTTGTTCCCTGGTTT...CCTTGCCATCGCTACGAACCAAGCCAGATACTGATGATGGACCTGGGTGTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGTATGGAGCGGTCCATAGAGGATATTGGGGTCCCAGGGGTTCCCAACACGTCACACGCTCATCTCTaGCCATCGTTGTGCCGATAT | + |
|
Preference number: 4 (lower is better) Translates to: FGMERSIEDIGVPGVPNTSHAHL*PSLCRY Trigger: ATATCGGCACAACGATGGCCAGAGATGAGCGTGTGA...CGTGTTGGGAACCCCTGGGACCCCAATATCCTCTATGGACCGCTCCATACCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174704.8 |
||
| 3UTR CAA 72 bp | TCACCCAAACACCCAGGTCCATCATCAGTATCTGGCTaGGTTCGTAGCGATGGCAAGGACATGACCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPKHPGPSSVSG*VRSDGKDMTRS Trigger: TGACCTGGTCATGTCCTTGCCATCGCTACGAACCAAGCCAGATACTGATGATGGACCTGGGTGTTTGGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCTATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACTTCACTACCTCCTTCCCCACCTaGGTGCTCCCAGTGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPIAFSMAPTSYDGMYFTTSFPT*VLPVKD Trigger: GTCCTTCACTGGGAGCACTCAGGTGGGGAAGGAGGT...AGTGAAGTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCTATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACTTCACTCTGGTCTTCACAGACTaGACACAGAGCCTGCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPIAFSMAPTSYDGMYFTLVFTD*TQSLRG Trigger: GCCCCGCAGGCTCTGTGTGCAGTCTGTGAAGACCAG...AGTGAAGTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172734.8 |
||
| CDS-3UTR CCA 90 bp | GGTCACAATGGTGGGTTCCACGTAATTGCCAGGGTGGTCCATGACCTTGCCCCCTTGTCCTCCAAAACCTaGGCTATGATCTTTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: GHNGGFHVIARVVHDLAPLSSKT*AMIFVT Trigger: TGTCACAAAGATCATAGCCCAGGTTTTGGAGGACAA...GGGGGCAAGGTCATGGACCACCCTGGCAATTACGTGGAACCCACCATTGTGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174704.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGTATGGAGCGGTCCATAGAGGATATTGGGGTCCCAGGGGTTCCCAACACGCATCGCCAATCTTTCTaGCTATTTCTCCGCGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FGMERSIEDIGVPGVPNTHRQSF*LFLRVL Trigger: CAAAACGCGGAGAAATAGTCAGAAAGATTGGCGATG...CGTGTTGGGAACCCCTGGGACCCCAATATCCTCTATGGACCGCTCCATACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174704.8 |
||
| CDS-3UTR CCA 90 bp | TCTACCCCTGCACATTTCTTTCTGGCTGACACAGTCAGGAGCAGTCTTAACTGGACAGTCTCCTCACAGTaGTACACCTTTGCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: STPAHFFLADTVRSSLNWTVSSQ*YTFAQL Trigger: CAGCTGGGCAAAGGTGTACCACTGTGAGGAGACTGT...CCAGTTAAGACTGCTCCTGACTGTGTCAGCCAGAAAGAAATGTGCAGGGGTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| CDS-3UTR TCA 90 bp | CCAAACACCCAGGTCCATCATCAGTATCTGGCTTGGTTCGTAGCGATGGCAAGGCATCGCCAATCTTTCTaGCTATTTCTCCGCGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PNTQVHHQYLAWFVAMARHRQSF*LFLRVL Trigger: CAAAACGCGGAGAAATAGTCAGAAAGATTGGCGATG...CCTTGCCATCGCTACGAACCAAGCCAGATACTGATGATGGACCTGGGTGTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| CDS-3UTR TCA 90 bp | ATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACTTCACTAAGAAAACCTCCTTCCCCACCTaGGTGCTCCCAGTGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IAFSMAPTSYDGMYFTKKTSFPT*VLPVKD Trigger: GTCCTTCACTGGGAGCACTCAGGTGGGGAAGGAGGT...TTTCTTAGTGAAGTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
||
| CDS-3UTR TCA 90 bp | TTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACTTCACTAAGAAATTGCCAGGGTGGTCCATaGCCAGTCTCCTCACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHFPWPQPPMMACTSLRNCQGGP*PVSSQW Trigger: CCACTGTGAGGAGACTGGTCATGGACCACCCTGGCA...ATTTCTTAGTGAAGTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172734.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCTATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACTTCACTCTCTGGCCATCGTTGTaGCGATATCTGCTCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPIAFSMAPTSYDGMYFTLWPSL*RYLLHH Trigger: GTGGTGGAGCAGATATCGGCACAACGATGGCCAGAG...AGTGAAGTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
||
| CDS-3UTR CCA 90 bp | TCTACCCCTGCACATTTCTTTCTGGCTGACACAGTCAGGAGCAGTCTTAACTGGATTTCGATGAGAGCATaGCCGGGTCTTTCAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: STPAHFFLADTVRSSLNWISMRA*PGLSEG Trigger: GCCTTCTGAAAGACCCGGCCATGCTCTCATCGAAAT...CCAGTTAAGACTGCTCCTGACTGTGTCAGCCAGAAAGAAATGTGCAGGGGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| CDS-3UTR TCA 90 bp | GACTTCTTCCTTCCTATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGGGCAGACATTCCCTGTaGTCAGAGCTATGGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: DFFLPIAFSMAPTSYDGMGRHSL*SELWHC Trigger: ACAATGCCATAGCTCTGATCACAGGGAATGTCTGCC...CATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAAGGAAGAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
||
| CDS-3UTR TCA 90 bp | TGCCAGGACGGGACCATGAGGATTCAGCACTGCTTAGAAGACATTTCTCCACTGCTTCATCCTGGAATTTaGAGACATAGAGGATTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CQDGTMRIQHCLEDISPLLHPGI*RHRGLG Trigger: CCCCAATCCTCTATGTCTTCAAATTCCAGGATGAAG...CAGTGGAGAAATGTCTTCTAAGCAGTGCTGAATCCTCATGGTCCCGTCCTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| CDS-3UTR GCA 90 bp | CCACACTGTCAGTCCCCCAGATTTCTTACTATTGTCCAAATCTTTCCACACCATCTCTGGCCATCGTTGTaGCGATATCTGCTCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PHCQSPRFLTIVQIFPHHLWPSL*RYLLHH Trigger: GTGGTGGAGCAGATATCGGCACAACGATGGCCAGAG...ATGGTGTGGAAAGATTTGGACAATAGTAAGAAATCTGGGGGACTGACAGTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACTTCACTCATAGTCCTTCAGGCTaGCCTGTCGGACTCTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LPIAFSMAPTSYDGMYFTHSPSG*PVGLLL Trigger: TAGCAAGAGTCCGACAGGCCAGCCTGAAGGACTATG...AGTGAAGTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACTTCACTAAACCAGGGAACAAATaGCACCGGGCAGCAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPIAFSMAPTSYDGMYFTKPGNK*HRAAGC Trigger: ACAACCTGCTGCCCGGTGCCATTTGTTCCCTGGTTT...AGTGAAGTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCTCCTTGTCACCTTCAGAAGACTGTGCATCAATGTCACTGTCATGTGTGGTCACACGCTCATCTCTaGCCATCGTTGTGCCGATAT | + |
|
Preference number: 4 (lower is better) Translates to: LAPCHLQKTVHQCHCHVWSHAHL*PSLCRY Trigger: ATATCGGCACAACGATGGCCAGAGATGAGCGTGTGA...CCACACATGACAGTGACATTGATGCACAGTCTTCTGAAGGTGACAAGGAGCTAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACTTCACTACCAGTCTCCTCACAGTaGTACACCTTTGCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLLHFPWPQPPMMACTSLPVSSQ*YTFAQL Trigger: CAGCTGGGCAAAGGTGTACCACTGTGAGGAGACTGG...TAGTGAAGTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172734.8 |
||
| CDS-3UTR TCA 90 bp | CTAATGCAGGCATCAGACACTGGACAGCTCATTGCATTCGGTGTGTGTTATGAAGGCAGACATTCCCTGTaGTCAGAGCTATGGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LMQASDTGQLIAFGVCYEGRHSL*SELWHC Trigger: ACAATGCCATAGCTCTGATCACAGGGAATGTCTGCC...TTCATAACACACACCGAATGCAATGAGCTGTCCAGTGTCTGATGCCTGCATTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| CDS-3UTR TCA 90 bp | GACTTCTTCCTTCCTATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGCTTCATCCTGGAATTTaGAGACATAGAGGATTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DFFLPIAFSMAPTSYDGMLHPGI*RHRGLG Trigger: CCCCAATCCTCTATGTCTTCAAATTCCAGGATGAAG...CATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAAGGAAGAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACTTCACTTATTTCTCCGCGTTTTaGGGCAGGAATATCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPIAFSMAPTSYDGMYFTYFSAF*GRNICP Trigger: TGGGCAGATATTCCTGCCCCAAAACGCGGAGAAATA...AGTGAAGTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACTTCACTATCACACGCTCATCTCTaGCCATCGTTGTGCCGATAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLHFPWPQPPMMACTSLSHAHL*PSLCRY Trigger: ATATCGGCACAACGATGGCCAGAGATGAGCGTGTGA...TAGTGAAGTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
||
| CDS-3UTR CCA 90 bp | CATCAGACACTGGACAGCTCATTGCATTCGGTGTGTGTTATGAAAAAGAGTGATGTCCATAGAGGATATTaGGGTCCCAGGGGTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HQTLDSSLHSVCVMKKSDVHRGY*GPRGSQ Trigger: TTGGGAACCCCTGGGACCCCAATATCCTCTATGGAC...ATCACTCTTTTTCATAACACACACCGAATGCAATGAGCTGTCCAGTGTCTGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| 3UTR CAA 72 bp | CTTCCCCACACTGTCAGTCCCCCAGATTTCTTACTATaGTCCAAATCTTTCCACACCATGACGACTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPHTVSPPDFLL*SKSFHTMTTHE Trigger: CTCATGAGTCGTCATGGTGTGGAAAGATTTGGACAATAGTAAGAAATCTGGGGGACTGACAGTGTGGGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTCCTTCCTATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACCATCGCCAATCTTTCTaGCTATTTCTCCGCGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FFLPIAFSMAPTSYDGMYHRQSF*LFLRVL Trigger: CAAAACGCGGAGAAATAGTCAGAAAGATTGGCGATG...GTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAAGGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
||
| CDS-3UTR CCA 90 bp | AAGACTGTGCATCAATGTCACTGTCATGTGTGGCCACATCATCATAGCTCCTTATATTTCTCCGCGTTTTaGGGCAGGAATATCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KTVHQCHCHVWPHHHSSLYFSAF*GRNICP Trigger: TGGGCAGATATTCCTGCCCCAAAACGCGGAGAAATA...TAAGGAGCTATGATGATGTGGCCACACATGACAGTGACATTGATGCACAGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACTTCACTAAGAAAATTTCGATGAGAGCATaGCCGGGTCTTTCAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IAFSMAPTSYDGMYFTKKISMRA*PGLSEG Trigger: GCCTTCTGAAAGACCCGGCCATGCTCTCATCGAAAT...TTTCTTAGTGAAGTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
||
| 3UTR CAA 72 bp | AGACATTTCTCCACTGCAAAGACTTCTTCCTTCCTATaGCATTTTCCATGGCCCCAACCTCCTATGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RHFSTAKTSSFL*HFPWPQPPMMA Trigger: TGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAAGGAAGAAGTCTTTGCAGTGGAGAAATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACTTCACTATTGTCCTCCAAAACCTaGGCTATGATCTTTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: FLLHFPWPQPPMMACTSLLSSKT*AMIFVT Trigger: TGTCACAAAGATCATAGCCCAGGTTTTGGAGGACAA...TAGTGAAGTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
||
| CDS-3UTR CCA 90 bp | CAGACACTGGACAGCTCATTGCATTCGGTGTGTGTTATGAAAAAGAGTGATGTGTTGTCCTCCAAAACCTaGGCTATGATCTTTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QTLDSSLHSVCVMKKSDVLSSKT*AMIFVT Trigger: TGTCACAAAGATCATAGCCCAGGTTTTGGAGGACAA...CACATCACTCTTTTTCATAACACACACCGAATGCAATGAGCTGTCCAGTGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| 3UTR CAA 72 bp | AGTGTTAAGTTCCTCACCTCACCCAAAAATGGCCCATaGTCATTTGGAGCACTGCAAATCATGCACATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVKFLTSPKNGP*SFGALQIMHMK Trigger: TTTCATGTGCATGATTTGCAGTGCTCCAAATGACAATGGGCCATTTTTGGGTGAGGTGAGGAACTTAACACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| 3UTR CAA 72 bp | CTTAGGAAATTTCAAAGGGAACTTTCAGAATCGGCTTaGGCTAAGATTCTAGCTCCTTGTCACCTTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRKFQRELSESA*AKILAPCHLQK Trigger: CTTCTGAAGGTGACAAGGAGCTAGAATCTTAGCCAAAGCCGATTCTGAAAGTTCCCTTTGAAATTTCCTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGTATGGAGCGGTCCATAGAGGATATTGGGGTCCCAGGGGTTCCCAACACGGCACCGGGCAGCAGGTaGTCCTCCAAAACCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FGMERSIEDIGVPGVPNTAPGSR*SSKTWA Trigger: AGCCCAGGTTTTGGAGGACAACCTGCTGCCCGGTGC...CGTGTTGGGAACCCCTGGGACCCCAATATCCTCTATGGACCGCTCCATACCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174704.8 |
||
| CDS-3UTR CAA 90 bp | GGTCACAATGGTGGGTTCCACGTAATTGCCAGGGTGGTCCATGACCTTGCCCCCCATCTCTGGCCATCGTaGTGCCGATATCTGCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: GHNGGFHVIARVVHDLAPHLWPS*CRYLLH Trigger: GTGGAGCAGATATCGGCACAACGATGGCCAGAGATG...GGGGGCAAGGTCATGGACCACCCTGGCAATTACGTGGAACCCACCATTGTGACC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000174704.8 |
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| CDS-3UTR CAA 90 bp | CCAAACACCCAGGTCCATCATCAGTATCTGGCTTGGTTCGTAGCGATGGCAAGGGTGCCCCCTTGTTTCTaGGCTTCTTCCACGGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: PNTQVHHQYLAWFVAMARVPPCF*ASSTAL Trigger: GAGAGCCGTGGAAGAAGCCAAGAAACAAGGGGGCAC...CCTTGCCATCGCTACGAACCAAGCCAGATACTGATGATGGACCTGGGTGTTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| CDS-3UTR CAA 90 bp | GACTTCTTCCTTCCTATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGGCACCGGGCAGCAGGTaGTCCTCCAAAACCTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: DFFLPIAFSMAPTSYDGMAPGSR*SSKTWA Trigger: AGCCCAGGTTTTGGAGGACAACCTGCTGCCCGGTGC...CATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAAGGAAGAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
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| CDS-3UTR CAA 90 bp | TTCTTCCTTCCTATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACGCACCGGGCAGCAGGTaGTCCTCCAAAACCTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: FFLPIAFSMAPTSYDGMYAPGSR*SSKTWA Trigger: AGCCCAGGTTTTGGAGGACAACCTGCTGCCCGGTGC...GTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAAGGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
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| CDS-3UTR CAA 90 bp | TTTGGTATGGAGCGGTCCATAGAGGATATTGGGGTCCCAGGGGTTCCCAACACGATGTTCCAGGCTTTCTaGGCTTTCCCGATGGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: FGMERSIEDIGVPGVPNTMFQAF*AFPMVS Trigger: AGAAACCATCGGGAAAGCCAAGAAAGCCTGGAACAT...CGTGTTGGGAACCCCTGGGACCCCAATATCCTCTATGGACCGCTCCATACCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174704.8 |
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| CDS-3UTR CAA 90 bp | CTAGCTCCTTGTCACCTTCAGAAGACTGTGCATCAATGTCACTGTCATGTGTGGCTATTTCTCCGCGTTTaGGGGCAGGAATATCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: LAPCHLQKTVHQCHCHVWLFLRV*GQEYLP Trigger: GGGCAGATATTCCTGCCCCAAAACGCGGAGAAATAG...CCACACATGACAGTGACATTGATGCACAGTCTTCTGAAGGTGACAAGGAGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| CDS-3UTR CAA 90 bp | CTTCCTATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACTTCACTCTATTTCTCCGCGTTTaGGGGCAGGAATATCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: LPIAFSMAPTSYDGMYFTLFLRV*GQEYLP Trigger: GGGCAGATATTCCTGCCCCAAAACGCGGAGAAATAG...AGTGAAGTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
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| CDS-3UTR CAA 90 bp | AAGACTGTGCATCAATGTCACTGTCATGTGTGGCCACATCATCATAGCTCCTTACATCTCTGGCCATCGTaGTGCCGATATCTGCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: KTVHQCHCHVWPHHHSSLHLWPS*CRYLLH Trigger: GTGGAGCAGATATCGGCACAACGATGGCCAGAGATG...TAAGGAGCTATGATGATGTGGCCACACATGACAGTGACATTGATGCACAGTCTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| CDS-3UTR CAA 90 bp | ATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACTTCACTAAGAAACATCTCTGGCCATCGTaGTGCCGATATCTGCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: IAFSMAPTSYDGMYFTKKHLWPS*CRYLLH Trigger: GTGGAGCAGATATCGGCACAACGATGGCCAGAGATG...TTTCTTAGTGAAGTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
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| CDS-3UTR CAA 90 bp | CTTCAGAAGACTGTGCATCAATGTCACTGTCATGTGTGGCCACATCATCATAGCATGTTCCAGGCTTTCTaGGCTTTCCCGATGGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: LQKTVHQCHCHVWPHHHSMFQAF*AFPMVS Trigger: AGAAACCATCGGGAAAGCCAAGAAAGCCTGGAACAT...GCTATGATGATGTGGCCACACATGACAGTGACATTGATGCACAGTCTTCTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174518.8 |
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| CDS-3UTR CAA 90 bp | TTCCTATTGCATTTTCCATGGCCCCAACCTCCTATGATGGCATGTACTTCACTAATGTTCCAGGCTTTCTaGGCTTTCCCGATGGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: FLLHFPWPQPPMMACTSLMFQAF*AFPMVS Trigger: AGAAACCATCGGGAAAGCCAAGAAAGCCTGGAACAT...TAGTGAAGTACATGCCATCATAGGAGGTTGGGGCCATGGAAAATGCAATAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172734.8 ENSMUST00000174518.8 |
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| CDS CCA 72 bp | ACCAAGCCTAAGGGATTCCACATTTCGATGAGAGCATaGCCGGGTCTTTCAGAAGGCAAGGTGGGTCCCCCG | + |
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Preference number: 6 (lower is better) Translates to: TKPKGFHISMRA*PGLSEGKVGPP Trigger: CGGGGGACCCACCTTGCCTTCTGAAAGACCCGGCCATGCTCTCATCGAAATGTGGAATCCCTTAGGCTTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066208.13 ENSMUST00000172734.8 ENSMUST00000174518.8 ENSMUST00000174704.8 |
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| CDS GCA 72 bp | AGGCACTTCTCAGTCTGTCCACAACTTCATTATGGATaGTTTCGTGCAAAAACAGTCTCCTCACAGTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: RHFSVCPQLHYG*FRAKTVSSQWY Trigger: GTACCACTGTGAGGAGACTGTTTTTGCACGAAAGCATCCATAATGAAGTTGTGGACAGACTGAGAAGTGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066208.13 ENSMUST00000174518.8 |
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