Pregenerated sensors for ALDH6A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021238Ensembl transcript IDs: ENSMUST00000085192.7, ENSMUST00000220491.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATAGAATTAAACAGTGGCCATGAATCACGCAGAAGAAAGTGGCATTaGGCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGG | + |
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Preference number: 1 (lower is better) Translates to: IELNSGHESRRRKWH*AESSRHNAKICKTR Trigger: CCTAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGCTCAATGCCACTTTCTTCTGCGTGATTCATGGCCACTGTTTAATTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR-3UTR CCA 90 bp | ACCACCTTTTATTTTAACTCACTAAACCCACAATGGACTGGAGCAGCACTGTCCGGTTACATGTTAGTGTaGGGACCCGTGGAGGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: TTFYFNSLNPQWTGAALSGYMLV*GPVEGC Trigger: GCAGCCCTCCACGGGTCCCCACACTAACATGTAACC...GGACAGTGCTGCTCCAGTCCATTGTGGGTTTAGTGAGTTAAAATAAAAGGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR-3UTR TCA 90 bp | AAAGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGTTACTCAGGCTGGACTaGGTCTTGAAGAACTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: KVRLQTGQTDTLFCSAHQLLRLD*VLKNLL Trigger: AAGCAAGTTCTTCAAGACTCAGTCCAGCCTGAGTAA...CTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGAACTGTGGAGACATATaGAGAACAATGAAGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: KVRLQTGQTDTLFCSAHQNCGDI*RTMKAW Trigger: CCAGGCCTTCATTGTTCTCCATATGTCTCCACAGTT...CTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR-3UTR TCA 90 bp | GAAAGTGGCATTGAGCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAAGCAAAGATGGCACATaGAGGCCGCCAAGAGTGATG | + |
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Preference number: 2 (lower is better) Translates to: ESGIEQRAVVTMLRYVKLSKDGT*RPPRVM Trigger: CATCACTCTTGGCGGCCTTCATGTGCCATCTTTGCT...TAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGCTCAATGCCACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR-3UTR TCA 90 bp | AGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGTCACATATGGAGAACAATaGAGGCCTGGTATTAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: SQASDRSDRHTVLFSTSVTYGEQ*RPGISV Trigger: AACACTAATACCAGGCCTTCATTGTTCTCCATATGT...GACTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGGTTACATGTTAGTGAAGGCCGCCAAGAGTaGTGGGAAATTACTCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: AESSRHNAKICKTRLHVSEGRQE*WEITQA Trigger: AGCCTGAGTAATTTCCCATCACTCTTGGCGGCCTTC...ACTAACATGTAACCTAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR-3UTR TCA 90 bp | AAAGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGCTCATAGATCTGTTTTaGGCAAAGATGGCACATGAA | + |
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Preference number: 2 (lower is better) Translates to: KVRLQTGQTDTLFCSAHQLIDLF*AKMAHE Trigger: TTCATGTGCCATCTTTGCTCAAAACAGATCTATGAG...CTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGAGATCCTTTGATTTCTaGGTCAAAATCATTTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: KVRLQTGQTDTLFCSAHQRSFDF*VKIICG Trigger: TCCACAAATGATTTTGACCCAGAAATCAAAGGATCT...CTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGGTTACATGTTAGTGATGACCTGTTTCAGTaGTTGGAAGATCTGTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: AESSRHNAKICKTRLHVSDDLFQ*LEDLSL Trigger: TAGGGACAGATCTTCCAATCACTGAAACAGGTCATC...ACTAACATGTAACCTAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR-3UTR GCA 90 bp | ACCACCTTTTATTTTAACTCACTAAACCCACAATGGACTGGAGCAGCACTGTCCGGATCTATTTGTATCTaGATTAATGGCTGGAGTATT | + |
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Preference number: 2 (lower is better) Translates to: TTFYFNSLNPQWTGAALSGSICI*INGWSI Trigger: AATACTCCAGCCATTAATGCAGATACAAATAGATCC...GGACAGTGCTGCTCCAGTCCATTGTGGGTTTAGTGAGTTAAAATAAAAGGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR CCA 72 bp | AAACCCACAATGGACTGGAGCAGCACTGTCCACACATaGCTATACAGAACAGAGCACAGTAATGACAGCGCC | + |
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Preference number: 3 (lower is better) Translates to: KPTMDWSSTVHT*LYRTEHSNDSA Trigger: GGCGCTGTCATTACTGTGCTCTGTTCTGTATAGCCATGTGTGGACAGTGCTGCTCCAGTCCATTGTGGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR-3UTR CAA 90 bp | AAAGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGCAGAAGAAAGTGGCATaGAGCAGAGAGCAGTCGTCA | + |
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Preference number: 3 (lower is better) Translates to: KVRLQTGQTDTLFCSAHQQKKVA*SREQSS Trigger: TGACGACTGCTCTCTGCTCAATGCCACTTTCTTCTG...CTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR TCA 72 bp | CATTCTCATAGATCTGTTTTGAGCAAAGATGGCACATaGAGGCCGCCAAGAGTGATGGGAAATTACTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: HSHRSVLSKDGT*RPPRVMGNYSG Trigger: GCCTGAGTAATTTCCCATCACTCTTGGCGGCCTTCATGTGCCATCTTTGCTCAAAACAGATCTATGAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR TCA 72 bp | AACAGTGGCCATGAATCACGCAGAAGAAAGTGGCATTaGGCAGAGAGCAGTCGTCACAATGCTAAGATATGT | + |
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Preference number: 3 (lower is better) Translates to: NSGHESRRRKWH*AESSRHNAKIC Trigger: ACATATCTTAGCATTGTGACGACTGCTCTCTGCTCAATGCCACTTTCTTCTGCGTGATTCATGGCCACTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR-3UTR CAA 90 bp | ACCACCTTTTATTTTAACTCACTAAACCCACAATGGACTGGAGCAGCACTGTCCCATCCTGAGGTATCCTaGAGAAGTATTTTAAGACAC | + |
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Preference number: 3 (lower is better) Translates to: TTFYFNSLNPQWTGAALSHPEVS*RSILRH Trigger: GTGTCTTAAAATACTTCTCAAGGATACCTCAGGATG...GGACAGTGCTGCTCCAGTCCATTGTGGGTTTAGTGAGTTAAAATAAAAGGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR CCA 72 bp | TTTACCACCTTTTATTTTAACTCACTAAACCCACAATaGACTGGAGCAGCACTGTCCACACATGGCTATACA | + |
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Preference number: 3 (lower is better) Translates to: FTTFYFNSLNPQ*TGAALSTHGYT Trigger: TGTATAGCCATGTGTGGACAGTGCTGCTCCAGTCCATTGTGGGTTTAGTGAGTTAAAATAAAAGGTGGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR-3UTR CAA 90 bp | ACTGAAGCTCTGAATTCTGCCAGGGCTGGTTACTTTAATAATCTTAGCTCCAAAATGATGGGAGATCCTTaGATTTCTGGGTCAAAATCA | + |
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Preference number: 3 (lower is better) Translates to: TEALNSARAGYFNNLSSKMMGDP*ISGSKS Trigger: TGATTTTGACCCAGAAATCAAAGGATCTCCCATCAT...TTTGGAGCTAAGATTATTAAAGTAACCAGCCCTGGCAGAATTCAGAGCTTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR TCA 72 bp | ATTACCTTAAAAACTGTGGAGACATATGGAGAACAATaGAGGCCTGGTATTAGTGTTATCCTGCACTCCCTA | + |
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Preference number: 3 (lower is better) Translates to: ITLKTVETYGEQ*RPGISVILHSL Trigger: TAGGGAGTGCAGGATAACACTAATACCAGGCCTTCATTGTTCTCCATATGTCTCCACAGTTTTTAAGGTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR-3UTR CAA 90 bp | GAAAGTGGCATTGAGCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAACAACTTTGAAGGGATaGAGAGTTCTGAGAAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: ESGIEQRAVVTMLRYVKLTTLKG*RVLRKN Trigger: ATTCTTTCTCAGAACTCTCAATCCCTTCAAAGTTGT...TAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGCTCAATGCCACTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR GCA 90 bp | ACCACCTTTTATTTTAACTCACTAAACCCACAATGGACTGGAGCAGCACTGTCCCCGGGACCGCATTGCTaGCGCTGCCGCCACTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: TTFYFNSLNPQWTGAALSPGPHC*RCRHCR Trigger: GCGGCAGTGGCGGCAGCGGCAGCAATGCGGTCCCGG...GGACAGTGCTGCTCCAGTCCATTGTGGGTTTAGTGAGTTAAAATAAAAGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR GCA 90 bp | AGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGTCCCCAGCAGCTCCGAATaGTGCCCCGACCAGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: SQASDRSDRHTVLFSTSVPSSSE*CPDQLV Trigger: AACCAGCTGGTCGGGGCAGCATTCGGAGCTGCTGGG...GACTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR TCA 90 bp | AGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGTCAATTGGTGTCTCCCCTaGAGGAAGAGCGAGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: SQASDRSDRHTVLFSTSVNWCLP*RKSESR Trigger: CCGGCTCTCGCTCTTCCTTCAGGGGAGACACCAATT...GACTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR GCA 90 bp | AAAGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGAGCAGCTCCGAATGCTaGCCCGACCAGCTGGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: KVRLQTGQTDTLFCSAHQSSSEC*PDQLVE Trigger: CTCAACCAGCTGGTCGGGGCAGCATTCGGAGCTGCT...CTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR GCA 90 bp | ACCACCTTTTATTTTAACTCACTAAACCCACAATGGACTGGAGCAGCACTGTCCAGAGCCATGCAGCGCTaGCCAGCAGCTCCGAATGCT | + |
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Preference number: 4 (lower is better) Translates to: TTFYFNSLNPQWTGAALSRAMQR*PAAPNA Trigger: AGCATTCGGAGCTGCTGGGCAGCGCTGCATGGCTCT...GGACAGTGCTGCTCCAGTCCATTGTGGGTTTAGTGAGTTAAAATAAAAGGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CCA 90 bp | AAAGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGAGATCAGCTCCAGGCTaGTCTCCTGCATTGACTCGC | + |
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Preference number: 4 (lower is better) Translates to: KVRLQTGQTDTLFCSAHQRSAPG*SPALTR Trigger: GCGAGTCAATGCAGGAGACCAGCCTGGAGCTGATCT...CTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CCA 90 bp | ACCACCTTTTATTTTAACTCACTAAACCCACAATGGACTGGAGCAGCACTGTCCACTCTCTCTTTGGCCTaGGGGGTGATCAGGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TTFYFNSLNPQWTGAALSTLSLA*GVIRGP Trigger: TGGCCCCCTGATCACCCCCCAGGCCAAAGAGAGAGT...GGACAGTGCTGCTCCAGTCCATTGTGGGTTTAGTGAGTTAAAATAAAAGGTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR TCA 90 bp | ACCACCTTTTATTTTAACTCACTAAACCCACAATGGACTGGAGCAGCACTGTCCGGGGCCCCAGAATCCTaGAGCAACTTAGCAAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TTFYFNSLNPQWTGAALSGAPES*SNLARS Trigger: GCTCCTTGCTAAGTTGCTTCAGGATTCTGGGGCCCC...GGACAGTGCTGCTCCAGTCCATTGTGGGTTTAGTGAGTTAAAATAAAAGGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR TCA 90 bp | ACCACCTTTTATTTTAACTCACTAAACCCACAATGGACTGGAGCAGCACTGTCCCCCACATCCACCATGTaGGCATATTTCCGGGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: TTFYFNSLNPQWTGAALSPTSTM*AYFRAV Trigger: CACCGCCCGGAAATATGCTCACATGGTGGATGTGGG...GGACAGTGCTGCTCCAGTCCATTGTGGGTTTAGTGAGTTAAAATAAAAGGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR GCA 90 bp | ACCACCTTTTATTTTAACTCACTAAACCCACAATGGACTGGAGCAGCACTGTCCCTGTTGAAAGAGCCATaGAGCGCTGCCCAGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: TTFYFNSLNPQWTGAALSLLKEP*SAAQQL Trigger: GAGCTGCTGGGCAGCGCTGCATGGCTCTTTCAACAG...GGACAGTGCTGCTCCAGTCCATTGTGGGTTTAGTGAGTTAAAATAAAAGGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CCA 90 bp | AAAGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGATGTACTCTCCTGCCTaGTTGGATCCCACAAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: KVRLQTGQTDTLFCSAHQMYSPA*LDPTKL Trigger: CAGCTTTGTGGGATCCAACCAGGCAGGAGAGTACAT...CTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CCA 90 bp | ACCACCTTTTATTTTAACTCACTAAACCCACAATGGACTGGAGCAGCACTGTCCCCTCCCCTACGAGGATaGCTGTTGAAAGAGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: TTFYFNSLNPQWTGAALSPPLRG*LLKEPC Trigger: GCATGGCTCTTTCAACAGCCATCCTCGTAGGGGAGG...GGACAGTGCTGCTCCAGTCCATTGTGGGTTTAGTGAGTTAAAATAAAAGGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR GCA 90 bp | AAAGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGGGAAGAGAAGGAGGATaGTGGATACCATGTGGCATT | + |
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Preference number: 4 (lower is better) Translates to: KVRLQTGQTDTLFCSAHQGREGG*WIPCGI Trigger: AATGCCACATGGTATCCAGCATCCTCCTTCTCTTCC...CTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR GCA 90 bp | AGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGTCAGGAAAATTAAATGGTaGAATGCCTGCACACACCCC | + |
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Preference number: 4 (lower is better) Translates to: SQASDRSDRHTVLFSTSVRKIKW*NACTHP Trigger: GGGGTGTGTGCAGGCATTGCACCATTTAATTTTCCT...GACTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR GCA 90 bp | AGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGTCTCCCACAAAGCTGATTaGCTTGATGTCTGGATGATC | + |
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Preference number: 4 (lower is better) Translates to: SQASDRSDRHTVLFSTSVSHKAD*LDVWMI Trigger: GATCATCCAGACATCAAGGCAATCAGCTTTGTGGGA...GACTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CCA 90 bp | AGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGTCAGAGAAGGAGGATGCTaGATACCATGTGGCATTTAC | + |
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Preference number: 4 (lower is better) Translates to: SQASDRSDRHTVLFSTSVREGGC*IPCGIY Trigger: GTAAATGCCACATGGTATCCAGCATCCTCCTTCTCT...GACTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR TCA 90 bp | GAAAGTGGCATTGAGCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTATACGAGGATGGCTGTTaGAAGAGCCATGCAGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: ESGIEQRAVVTMLRYVKLYEDGC*KSHAAL Trigger: CAGCGCTGCATGGCTCTTTCAACAGCCATCCTCGTA...TAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGCTCAATGCCACTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR GCA 90 bp | ACTGAAGCTCTGAATTCTGCCAGGGCTGGTTACTTTAATAATCTTAGCTCCAAACAGGGAAAGCACGTTTaGAGGACTCAACGGCTGCGT | + |
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Preference number: 4 (lower is better) Translates to: TEALNSARAGYFNNLSSKQGKHV*RTQRLR Trigger: ACGCAGCCGTTGAGTCCTGCAAACGTGCTTTCCCTG...TTTGGAGCTAAGATTATTAAAGTAACCAGCCCTGGCAGAATTCAGAGCTTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CCA 90 bp | GAAAGTGGCATTGAGCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTACCGATCGACCAGTTCTaGCAGCCACTTCTTAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: ESGIEQRAVVTMLRYVKLPIDQF*QPLLSL Trigger: GAGGCTAAGAAGTGGCTGCCAGAACTGGTCGATCGG...TAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGCTCAATGCCACTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR TCA 90 bp | GCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGGTTACATGTTAGTTGGTCTCTCCCAGCATaGGGGATGTCACACTACAGG | + |
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Preference number: 4 (lower is better) Translates to: AESSRHNAKICKTRLHVSWSLPA*GMSHYR Trigger: CCTGTAGTGTGACATCCCTCATGCTGGGAGAGACCA...ACTAACATGTAACCTAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR TCA 90 bp | GAAAGTGGCATTGAGCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAAAGAGCGAGAGCCGGTaGAGGAAAACATCGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: ESGIEQRAVVTMLRYVKLKSESR*RKTSAK Trigger: CTTTGCCGATGTTTTCCTTCACCGGCTCTCGCTCTT...TAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGCTCAATGCCACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR GCA 90 bp | ACCACCTTTTATTTTAACTCACTAAACCCACAATGGACTGGAGCAGCACTGTCCGAAGATGTACTCTCCTaGCTGGTTGGATCCCACAAA | + |
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Preference number: 4 (lower is better) Translates to: TTFYFNSLNPQWTGAALSEDVLS*LVGSHK Trigger: TTTGTGGGATCCAACCAGGCAGGAGAGTACATCTTC...GGACAGTGCTGCTCCAGTCCATTGTGGGTTTAGTGAGTTAAAATAAAAGGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR GCA 90 bp | ACCACCTTTTATTTTAACTCACTAAACCCACAATGGACTGGAGCAGCACTGTCCCGCTATCGATCAGATTaGAGACTCTCTCTTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: TTFYFNSLNPQWTGAALSRYRSD*RLSLWP Trigger: AGGCCAAAGAGAGAGTCTGCAATCTGATCGATAGCG...GGACAGTGCTGCTCCAGTCCATTGTGGGTTTAGTGAGTTAAAATAAAAGGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR GCA 90 bp | AAAGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGGCGTGTAAAACTGGATaGCCTGTTTGCCATAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: KVRLQTGQTDTLFCSAHQACKTG*PVCHRN Trigger: ATTTCTATGGCAAACAGGGCATCCAGTTTTACACGC...CTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CCA 90 bp | AAAGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGCTACTCCATGGTTTTTaGCTCCCATATTGGCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: KVRLQTGQTDTLFCSAHQLLHGF*LPYWLE Trigger: TTCAAGCCAATATGGGAGCCAAAAACCATGGAGTAG...CTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CCA 90 bp | GAAAGTGGCATTGAGCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGCTGCCCCGACCAGCTaGTTGAGGGTATTTTCCTTA | + |
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Preference number: 4 (lower is better) Translates to: ESGIEQRAVVTMLRYVKLAAPTS*LRVFSL Trigger: TAAGGAAAATACCCTCAACCAGCTGGTCGGGGCAGC...TAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGCTCAATGCCACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CCA 90 bp | ACCACCTTTTATTTTAACTCACTAAACCCACAATGGACTGGAGCAGCACTGTCCGGCATGACTACTCCATaGTTTTTGGCTCCCATATTG | + |
|
Preference number: 4 (lower is better) Translates to: TTFYFNSLNPQWTGAALSGMTTP*FLAPIL Trigger: CAATATGGGAGCCAAAAACCATGGAGTAGTCATGCC...GGACAGTGCTGCTCCAGTCCATTGTGGGTTTAGTGAGTTAAAATAAAAGGTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CCA 90 bp | GAAAGTGGCATTGAGCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGCCCATCCAGAAGGATaGAAGCTCCCTCTTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESGIEQRAVVTMLRYVKLAHPEG*KLPLLF Trigger: GAACAAAAGAGGGAGCTTCCATCCTTCTGGATGGGC...TAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGCTCAATGCCACTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CCA 90 bp | GCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGGTTACATGTTAGTGCAAAGGCACTGGAATaGGGACATTCACACCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: AESSRHNAKICKTRLHVSAKALE*GHSHPP Trigger: AGGTGGGTGTGAATGTCCCCATTCCAGTGCCTTTGC...ACTAACATGTAACCTAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CCA 90 bp | GCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGGTTACATGTTAGTCATCGGCAAAGGCACTaGAATGGGGACATTCACACC | + |
|
Preference number: 4 (lower is better) Translates to: AESSRHNAKICKTRLHVSHRQRH*NGDIHT Trigger: GGTGTGAATGTCCCCATTCCAGTGCCTTTGCCGATG...ACTAACATGTAACCTAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR TCA 90 bp | GAAAGTGGCATTGAGCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGCTCCCATATTGGCTTaGACCCTCTTGCCATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ESGIEQRAVVTMLRYVKLAPILA*TLLPFL Trigger: AAGAAATGGCAAGAGGGTTCAAGCCAATATGGGAGC...TAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGCTCAATGCCACTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR TCA 90 bp | GCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGGTTACATGTTAGTTGGCTCCATTGGTGGTaGAGATGGCAGTTCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: AESSRHNAKICKTRLHVSWLHWW*RWQFHF Trigger: GAAATGGAACTGCCATCTTCACCACCAATGGAGCCA...ACTAACATGTAACCTAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CCA 90 bp | GCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGGTTACATGTTAGTCCATCTCAGCTTTGGTaGACTGAGGAACCCTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: AESSRHNAKICKTRLHVSPSQLW*TEEPYQ Trigger: TTGGTAGGGTTCCTCAGTCCACCAAAGCTGAGATGG...ACTAACATGTAACCTAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CCA 90 bp | AAAGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGCAAAACCACAAGAACTaGACCAAATATCTCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KVRLQTGQTDTLFCSAHQQNHKN*TKYLLF Trigger: AAAGAGGAGATATTTGGTCCAGTTCTTGTGGTTTTG...CTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
||
| CDS-3UTR CCA 90 bp | GAAAGTGGCATTGAGCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAAACTTCATTGGTGGCTaGGTTGTGGATGTCAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ESGIEQRAVVTMLRYVKLNFIGG*VVDVNP Trigger: TGGATTGACATCCACAACCCAGCCACCAATGAAGTT...TAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGCTCAATGCCACTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR TCA 90 bp | GAAAGTGGCATTGAGCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTATCCCTTGTTCCAGTGTaGTTAACCTGGCAATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ESGIEQRAVVTMLRYVKLSLVPV*LTWQFL Trigger: AAGAAATTGCCAGGTTAATCACACTGGAACAAGGGA...TAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGCTCAATGCCACTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR GCA 90 bp | GAAAGTGGCATTGAGCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTATGGCTTGAACCCTCTTaGCATTTCTTGATCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ESGIEQRAVVTMLRYVKLWLEPS*HFLILF Trigger: AAAGAGGATCAAGAAATGGCAAGAGGGTTCAAGCCA...TAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGCTCAATGCCACTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CCA 90 bp | ACTGAAGCTCTGAATTCTGCCAGGGCTGGTTACTTTAATAATCTTAGCTCCAAATTGGTGGCTGGGTTGTaGATGTCAATCCATTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: TEALNSARAGYFNNLSSKLVAGL*MSIHLS Trigger: TGATAAATGGATTGACATCCACAACCCAGCCACCAA...TTTGGAGCTAAGATTATTAAAGTAACCAGCCCTGGCAGAATTCAGAGCTTCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CCA 90 bp | GCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGGTTACATGTTAGTTTTTGGCTCCCATATTaGCTTGAACCCTCTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AESSRHNAKICKTRLHVSFWLPY*LEPSCH Trigger: ATGGCAAGAGGGTTCAAGCCAATATGGGAGCCAAAA...ACTAACATGTAACCTAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CCA 90 bp | GCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGGTTACATGTTAGTTTCCTTATTGGCGTCTaGCATGACTACTCCATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AESSRHNAKICKTRLHVSFLIGV*HDYSMV Trigger: AACCATGGAGTAGTCATGCCAGACGCCAATAAGGAA...ACTAACATGTAACCTAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR TCA 90 bp | GCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGGTTACATGTTAGTACTTGGCTTAACATTTaGGATGATGGTTGGTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: AESSRHNAKICKTRLHVSTWLNI*DDGWSN Trigger: GTTGGACCAACCATCATCTCAAATGTTAAGCCAAGT...ACTAACATGTAACCTAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
||
| CDS-3UTR TCA 90 bp | ACTGAAGCTCTGAATTCTGCCAGGGCTGGTTACTTTAATAATCTTAGCTCCAAATCTTCTTCTTTCCACTaGGACGTGATAGTCTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TEALNSARAGYFNNLSSKSSSFH*DVIVFN Trigger: GTTAAAGACTATCACGTCTCAGTGGAAAGAAGAAGA...TTTGGAGCTAAGATTATTAAAGTAACCAGCCCTGGCAGAATTCAGAGCTTCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR TCA 90 bp | GCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGGTTACATGTTAGTGCCTTGATGTCTGGATaGTCGCAAATAAAGTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: AESSRHNAKICKTRLHVSALMSG*SQIKFT Trigger: TGTAAACTTTATTTGCGATCATCCAGACATCAAGGC...ACTAACATGTAACCTAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR TCA 90 bp | GCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGGTTACATGTTAGTCAAATTTTCCATCAATaGAGAGCTTTACAGTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AESSRHNAKICKTRLHVSQIFHQ*RALQLA Trigger: TGCCAACTGTAAAGCTCTTCATTGATGGAAAATTTG...ACTAACATGTAACCTAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CCA 90 bp | GCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGGTTACATGTTAGTGATTGCCTTGATGTCTaGATGATCGCAAATAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AESSRHNAKICKTRLHVSDCLDV*MIANKV Trigger: AACTTTATTTGCGATCATCCAGACATCAAGGCAATC...ACTAACATGTAACCTAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR CAA 72 bp | GGCAAGAGTGTATTCACTTTCATGATGGGAGATCCTTaGATTTCTGGGTCAAAATCATTTGTGGAAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: GKSVFTFMMGDP*ISGSKSFVERF Trigger: AAATCTTTCCACAAATGATTTTGACCCAGAAATCAAAGGATCTCCCATCATGAAAGTGAATACACTCTTGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| 3UTR CAA 72 bp | CTAAAAGCTAACTTATCACTTCATCCTGAGGTATCCTaGAGAAGTATTTTAAGACACAAGAACATGGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LKANLSLHPEVS*RSILRHKNMDN Trigger: ATTGTCCATGTTCTTGTGTCTTAAAATACTTCTCAAGGATACCTCAGGATGAAGTGATAAGTTAGCTTTTAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
||
| CDS TCA 90 bp | CAGTTCTGGCAGCCACTTCTTAGCCTCCCCTACGAGGATGGCTGTTaGAAGAGCCATGCAGCGCTGCCCAGCAGCTCCGAATGCTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QFWQPLLSLPYEDGC*KSHAALPSSSECCP Trigger: GGGGCAGCATTCGGAGCTGCTGGGCAGCGCTGCATGGCTCTTTCAACAGCCATCCTCGTAGGGGAGGCTAAGAAGTGGCTGCCAGAACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS GCA 90 bp | TTAGCCTCCCCTACGAGGATGGCTGTTGAAAGAGCCATGCAGCGCTaGCCAGCAGCTCCGAATGCTGCCCCGACCAGCTGGTTGAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LASPTRMAVERAMQR*PAAPNAAPTSWLRV Trigger: TACCCTCAACCAGCTGGTCGGGGCAGCATTCGGAGCTGCTGGGCAGCGCTGCATGGCTCTTTCAACAGCCATCCTCGTAGGGGAGGCTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS CCA 90 bp | GCCATGCAGCGCTGCCCAGCAGCTCCGAATGCTGCCCCGACCAGCTaGTTGAGGGTATTTTCCTTATTGGCGTCTGGCATGACTACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AMQRCPAAPNAAPTS*LRVFSLLASGMTTP Trigger: TGGAGTAGTCATGCCAGACGCCAATAAGGAAAATACCCTCAACCAGCTGGTCGGGGCAGCATTCGGAGCTGCTGGGCAGCGCTGCATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CAA 90 bp | AAAGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGGGATCCGGGACCGCATaGCTGCCGCTGCCGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: KVRLQTGQTDTLFCSAHQGSGTA*LPLPPL Trigger: CAGTGGCGGCAGCGGCAGCAATGCGGTCCCGGATCC...CTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS GCA 90 bp | TGTGTCTGCCCACGCAGGGAAAGCACGTTTGCAGGACTCAACGGCTaGGTCCATCTCAGCTTTGGTGGACTGAGGAACCCTACCAACAAC | + |
|
Preference number: 5 (lower is better) Translates to: CVCPRRESTFAGLNG*VHLSFGGLRNPTNN Trigger: GTTGTTGGTAGGGTTCCTCAGTCCACCAAAGCTGAGATGGACGCAGCCGTTGAGTCCTGCAAACGTGCTTTCCCTGCGTGGGCAGACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085192.7 ENSMUST00000220491.2 |
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| CDS CCA 90 bp | GAAGGAAGAGCGAGAGCCGGTGAAGGAAAACATCGGCAAAGGCACTaGAATGGGGACATTCACACCCACCTGTCCCACATCCACCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGRARAGEGKHRQRH*NGDIHTHLSHIHHV Trigger: CACATGGTGGATGTGGGACAGGTGGGTGTGAATGTCCCCATTCCAGTGCCTTTGCCGATGTTTTCCTTCACCGGCTCTCGCTCTTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CAA 90 bp | AGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGTCCTACGAGGATGGCTGTaGAAAGAGCCATGCAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SQASDRSDRHTVLFSTSVLRGWL*KEPCSA Trigger: AGCGCTGCATGGCTCTTTCAACAGCCATCCTCGTAG...GACTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS TCA 90 bp | TGTCCATGGATAATGTTCAGTGTTCCGTCAGGGGCCCCAGAATCCTaGAGCAACTTAGCAAGGAGCATAGTTGCTCCAGGTACTCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CPWIMFSVPSGAPES*SNLARSIVAPGTRS Trigger: AGAGCGAGTACCTGGAGCAACTATGCTCCTTGCTAAGTTGCTTCAGGATTCTGGGGCCCCTGACGGAACACTGAACATTATCCATGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CAA 90 bp | AGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGTCCTACCAACAACTTCATaGGTGGCTGGGTTGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SQASDRSDRHTVLFSTSVLPTTS*VAGLWM Trigger: CATCCACAACCCAGCCACCAATGAAGTTGTTGGTAG...GACTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CAA 90 bp | AAAGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGCCGCTATCGATCAGATaGCAGACTCTCTCTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KVRLQTGQTDTLFCSAHQPLSIR*QTLSLA Trigger: GGCCAAAGAGAGAGTCTGCAATCTGATCGATAGCGG...CTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CAA 90 bp | AAAGTCAGGCTTCAGACAGGTCAGACAGACACACTGTTCTGTTCAGCACATCAGGGCTCCCATATTGGCTaGAACCCTCTTGCCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KVRLQTGQTDTLFCSAHQGSHIG*NPLAIS Trigger: AGAAATGGCAAGAGGGTTCAAGCCAATATGGGAGCC...CTGATGTGCTGAACAGAACAGTGTGTCTGTCTGACCTGTCTGAAGCCTGACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CAA 90 bp | GCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGGTTACATGTTAGTCGGGCGGTGGCTCCATaGGTGGTGAAGATGGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AESSRHNAKICKTRLHVSRAVAP*VVKMAV Trigger: AACTGCCATCTTCACCACCAATGGAGCCACCGCCCG...ACTAACATGTAACCTAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS CCA 90 bp | CTCTCCTGCCTGGTTGGATCCCACAAAGCTGATTGCCTTGATGTCTaGATGATCGCAAATAAAGTTTACAGCATCATGTTGTCCATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSCLVGSHKADCLDV*MIANKVYSIMLSMD Trigger: ATCCATGGACAACATGATGCTGTAAACTTTATTTGCGATCATCCAGACATCAAGGCAATCAGCTTTGTGGGATCCAACCAGGCAGGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CAA 90 bp | GAAAGTGGCATTGAGCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGCCCCGACCAGCTGGTaGAGGGTATTTTCCTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: ESGIEQRAVVTMLRYVKLAPTSW*RVFSLL Trigger: CAATAAGGAAAATACCCTCAACCAGCTGGTCGGGGC...TAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGCTCAATGCCACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS TCA 90 bp | CCTGCCTGGTTGGATCCCACAAAGCTGATTGCCTTGATGTCTGGATaGTCGCAAATAAAGTTTACAGCATCATGTTGTCCATGGATAATG | + |
|
Preference number: 5 (lower is better) Translates to: PAWLDPTKLIALMSG*SQIKFTASCCPWIM Trigger: CATTATCCATGGACAACATGATGCTGTAAACTTTATTTGCGATCATCCAGACATCAAGGCAATCAGCTTTGTGGGATCCAACCAGGCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS GCA 90 bp | TTCGAAGATGTACTCTCCTGCCTGGTTGGATCCCACAAAGCTGATTaGCTTGATGTCTGGATGATCGCAAATAAAGTTTACAGCATCATG | + |
|
Preference number: 5 (lower is better) Translates to: FEDVLSCLVGSHKAD*LDVWMIANKVYSIM Trigger: CATGATGCTGTAAACTTTATTTGCGATCATCCAGACATCAAGGCAATCAGCTTTGTGGGATCCAACCAGGCAGGAGAGTACATCTTCGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CAA 90 bp | GAAAGTGGCATTGAGCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTATACTCTCCTGCCTGGTaGGATCCCACAAAGCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: ESGIEQRAVVTMLRYVKLYSPAW*DPTKLI Trigger: AATCAGCTTTGTGGGATCCAACCAGGCAGGAGAGTA...TAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGCTCAATGCCACTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS CCA 90 bp | TCTCAGCTTTGGTGGACTGAGGAACCCTACCAACAACTTCATTGGTaGCTGGGTTGTGGATGTCAATCCATTTATCACTTTTTGATTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SQLWWTEEPYQQLHW*LGCGCQSIYHFLIQ Trigger: TTGAATCAAAAAGTGATAAATGGATTGACATCCACAACCCAGCCACCAATGAAGTTGTTGGTAGGGTTCCTCAGTCCACCAAAGCTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CAA 90 bp | GAAAGTGGCATTGAGCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTATGGAAGCTCCCTCTTTaGTTCCGCTATCGATCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ESGIEQRAVVTMLRYVKLWKLPL*FRYRSD Trigger: ATCTGATCGATAGCGGAACAAAAGAGGGAGCTTCCA...TAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGCTCAATGCCACTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CAA 90 bp | ACTGAAGCTCTGAATTCTGCCAGGGCTGGTTACTTTAATAATCTTAGCTCCAAATCATTGGTGGCTGGGTaGTGGATGTCAATCCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: TEALNSARAGYFNNLSSKSLVAG*WMSIHL Trigger: TAAATGGATTGACATCCACAACCCAGCCACCAATGA...TTTGGAGCTAAGATTATTAAAGTAACCAGCCCTGGCAGAATTCAGAGCTTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
||
| CDS-3UTR CAA 90 bp | ACTGAAGCTCTGAATTCTGCCAGGGCTGGTTACTTTAATAATCTTAGCTCCAAAAGGGTATTTTCCTTATaGGCGTCTGGCATGACTACT | + |
|
Preference number: 5 (lower is better) Translates to: TEALNSARAGYFNNLSSKRVFSL*ASGMTT Trigger: AGTAGTCATGCCAGACGCCAATAAGGAAAATACCCT...TTTGGAGCTAAGATTATTAAAGTAACCAGCCCTGGCAGAATTCAGAGCTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS-3UTR CAA 90 bp | GCAGAGAGCAGTCGTCACAATGCTAAGATATGTAAAACTAGGTTACATGTTAGTCCCTCTTGCCATTTCTaGATCCTCTTTCGAAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: AESSRHNAKICKTRLHVSPSCHF*ILFRRC Trigger: ACATCTTCGAAAGAGGATCAAGAAATGGCAAGAGGG...ACTAACATGTAACCTAGTTTTACATATCTTAGCATTGTGACGACTGCTCTCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
||
| CDS TCA 72 bp | CAGCCACTTCTTAGCCTCCCCTACGAGGATGGCTGTTaGAAGAGCCATGCAGCGCTGCCCAGCAGCTCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: QPLLSLPYEDGC*KSHAALPSSSE Trigger: TTCGGAGCTGCTGGGCAGCGCTGCATGGCTCTTTCAACAGCCATCCTCGTAGGGGAGGCTAAGAAGTGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
||
| CDS CAA 90 bp | ATGCAGCGCTGCCCAGCAGCTCCGAATGCTGCCCCGACCAGCTGGTaGAGGGTATTTTCCTTATTGGCGTCTGGCATGACTACTCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: MQRCPAAPNAAPTSW*RVFSLLASGMTTPW Trigger: CCATGGAGTAGTCATGCCAGACGCCAATAAGGAAAATACCCTCAACCAGCTGGTCGGGGCAGCATTCGGAGCTGCTGGGCAGCGCTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
||
| CDS TCA 72 bp | GGGACATTCACACCCACCTGTCCCACATCCACCATGTaGGCATATTTCCGGGCGGTGGCTCCATTGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GTFTPTCPTSTM*AYFRAVAPLVV Trigger: CACCACCAATGGAGCCACCGCCCGGAAATATGCTCACATGGTGGATGTGGGACAGGTGGGTGTGAATGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
||
| CDS GCA 72 bp | GCTGGATACCATGTGGCATTTACCTTAGAAGAAACCTaGAGGATCCGGGACCGCATTGCTGCCGCTGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: AGYHVAFTLEET*RIRDRIAAAAA Trigger: GGCGGCAGCGGCAGCAATGCGGTCCCGGATCCTGCAGGTTTCTTCTAAGGTAAATGCCACATGGTATCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085192.7 ENSMUST00000220491.2 |
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| CDS GCA 72 bp | CCACGCAGGGAAAGCACGTTTGCAGGACTCAACGGCTaGGTCCATCTCAGCTTTGGTGGACTGAGGAACCCT | + |
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Preference number: 6 (lower is better) Translates to: PRRESTFAGLNG*VHLSFGGLRNP Trigger: AGGGTTCCTCAGTCCACCAAAGCTGAGATGGACGCAGCCGTTGAGTCCTGCAAACGTGCTTTCCCTGCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085192.7 ENSMUST00000220491.2 |
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| CDS CAA 72 bp | TGCCCAGCAGCTCCGAATGCTGCCCCGACCAGCTGGTaGAGGGTATTTTCCTTATTGGCGTCTGGCATGACT | + |
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Preference number: 6 (lower is better) Translates to: CPAAPNAAPTSW*RVFSLLASGMT Trigger: AGTCATGCCAGACGCCAATAAGGAAAATACCCTCAACCAGCTGGTCGGGGCAGCATTCGGAGCTGCTGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS CAA 72 bp | AGGGGGCCAAGATCAGCTCCAGGCTGGTCTCCTGCATaGACTCGCAGATTTTTGGCCCGATCGACCAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RGPRSAPGWSPA*TRRFLARSTSS Trigger: AGAACTGGTCGATCGGGCCAAAAATCTGCGAGTCAATGCAGGAGACCAGCCTGGAGCTGATCTTGGCCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS TCA 72 bp | GACTCAACGGCTGCGTCCATCTCAGCTTTGGTGGACTaGGGAACCCTACCAACAACTTCATTGGTGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: DSTAASISALVD*GTLPTTSLVAG Trigger: CCCAGCCACCAATGAAGTTGTTGGTAGGGTTCCTCAGTCCACCAAAGCTGAGATGGACGCAGCCGTTGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS CCA 72 bp | ATTGACTCGCAGATTTTTGGCCCGATCGACCAGTTCTaGCAGCCACTTCTTAGCCTCCCCTACGAGGATGGC | + |
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Preference number: 6 (lower is better) Translates to: IDSQIFGPIDQF*QPLLSLPYEDG Trigger: GCCATCCTCGTAGGGGAGGCTAAGAAGTGGCTGCCAGAACTGGTCGATCGGGCCAAAAATCTGCGAGTCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS CAA 72 bp | GCTCCAGGCTGGTCTCCTGCATTGACTCGCAGATTTTaGGCCCGATCGACCAGTTCTGGCAGCCACTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: APGWSPALTRRF*ARSTSSGSHFL Trigger: TAAGAAGTGGCTGCCAGAACTGGTCGATCGGGCCAAAAATCTGCGAGTCAATGCAGGAGACCAGCCTGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS TCA 72 bp | GACTCAACGGCTGCGTCCATCTCAGCTTTGGTGGACTaGGGAACCCTACCAACAACTTCATTGGTGGCCACT | + |
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Preference number: 6 (lower is better) Translates to: DSTAASISALVD*GTLPTTSLVAT Trigger: AGTGGCCACCAATGAAGTTGTTGGTAGGGTTCCTCAGTCCACCAAAGCTGAGATGGACGCAGCCGTTGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220491.2 |
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| CDS CCA 72 bp | GTTTGCAGGACTCAACGGCTGCGTCCATCTCAGCTTTaGTGGACTGAGGAACCCTACCAACAACTTCATTGG | + |
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Preference number: 6 (lower is better) Translates to: VCRTQRLRPSQL*WTEEPYQQLHW Trigger: CCAATGAAGTTGTTGGTAGGGTTCCTCAGTCCACCAAAGCTGAGATGGACGCAGCCGTTGAGTCCTGCAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085192.7 ENSMUST00000220491.2 |
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| CDS CAA 72 bp | AAAATAGATGTGTCTGCCCACGCAGGGAAAGCACGTTaGCAGGACTCAACGGCTGCGTCCATCTCAGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: KIDVSAHAGKAR*QDSTAASISAL Trigger: CAAAGCTGAGATGGACGCAGCCGTTGAGTCCTGCAAACGTGCTTTCCCTGCGTGGGCAGACACATCTATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085192.7 ENSMUST00000220491.2 |
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| CDS CCA 72 bp | CTTTGGTGGACTGAGGAACCCTACCAACAACTTCATTaGTGGCCACTGATGAGGAAGAGAAGGAGGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: LWWTEEPYQQLH*WPLMRKRRRML Trigger: CAGCATCCTCCTTCTCTTCCTCATCAGTGGCCACCAATGAAGTTGTTGGTAGGGTTCCTCAGTCCACCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220491.2 |
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| CDS TCA 72 bp | ATAATGTTCAGTGTTCCGTCAGGGGCCCCAGAATCCTaGAGCAACTTAGCAAGGAGCATAGTTGCTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: IMFSVPSGAPES*SNLARSIVAPG Trigger: ACCTGGAGCAACTATGCTCCTTGCTAAGTTGCTTCAGGATTCTGGGGCCCCTGACGGAACACTGAACATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS CAA 72 bp | CTTGATCCTCTTTCGAAGATGTACTCTCCTGCCTGGTaGGATCCCACAAAGCTGATTGCCTTGATGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LDPLSKMYSPAW*DPTKLIALMSG Trigger: TCCAGACATCAAGGCAATCAGCTTTGTGGGATCCAACCAGGCAGGAGAGTACATCTTCGAAAGAGGATCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS CAA 72 bp | TTCTTCGCCCATCCAGAAGGATGGAAGCTCCCTCTTTaGTTCCGCTATCGATCAGATTGCAGACTCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: FFAHPEGWKLPL*FRYRSDCRLSL Trigger: AAGAGAGAGTCTGCAATCTGATCGATAGCGGAACAAAAGAGGGAGCTTCCATCCTTCTGGATGGGCGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS CCA 72 bp | GACCAGCTGGTTGAGGGTATTTTCCTTATTGGCGTCTaGCATGACTACTCCATGGTTTTTGGCTCCCATATT | + |
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Preference number: 6 (lower is better) Translates to: DQLVEGIFLIGV*HDYSMVFGSHI Trigger: AATATGGGAGCCAAAAACCATGGAGTAGTCATGCCAGACGCCAATAAGGAAAATACCCTCAACCAGCTGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS GCA 72 bp | GTACTCTCCTGCCTGGTTGGATCCCACAAAGCTGATTaGCTTGATGTCTGGATGATCGCAAATAAAGTTTAC | + |
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Preference number: 6 (lower is better) Translates to: VLSCLVGSHKAD*LDVWMIANKVY Trigger: GTAAACTTTATTTGCGATCATCCAGACATCAAGGCAATCAGCTTTGTGGGATCCAACCAGGCAGGAGAGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS TCA 72 bp | ATGACTACTCCATGGTTTTTGGCTCCCATATTGGCTTaGACCCTCTTGCCATTTCTTGATCCTCTTTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: MTTPWFLAPILA*TLLPFLDPLSK Trigger: CTTCGAAAGAGGATCAAGAAATGGCAAGAGGGTTCAAGCCAATATGGGAGCCAAAAACCATGGAGTAGTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS GCA 72 bp | CATGGTTTTTGGCTCCCATATTGGCTTGAACCCTCTTaGCATTTCTTGATCCTCTTTCGAAGATGTACTCTC | + |
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Preference number: 6 (lower is better) Translates to: HGFWLPYWLEPS*HFLILFRRCTL Trigger: GAGAGTACATCTTCGAAAGAGGATCAAGAAATGGCAAGAGGGTTCAAGCCAATATGGGAGCCAAAAACCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS CCA 72 bp | CTGGTTGGATCCCACAAAGCTGATTGCCTTGATGTCTaGATGATCGCAAATAAAGTTTACAGCATCATGTTG | + |
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Preference number: 6 (lower is better) Translates to: LVGSHKADCLDV*MIANKVYSIML Trigger: CAACATGATGCTGTAAACTTTATTTGCGATCATCCAGACATCAAGGCAATCAGCTTTGTGGGATCCAACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS TCA 72 bp | TTGGATCCCACAAAGCTGATTGCCTTGATGTCTGGATaGTCGCAAATAAAGTTTACAGCATCATGTTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LDPTKLIALMSG*SQIKFTASCCP Trigger: TGGACAACATGATGCTGTAAACTTTATTTGCGATCATCCAGACATCAAGGCAATCAGCTTTGTGGGATCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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| CDS CCA 72 bp | GGAACCCTACCAACAACTTCATTGGTGGCTGGGTTGTaGATGTCAATCCATTTATCACTTTTTGATTCAACA | + |
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Preference number: 6 (lower is better) Translates to: GTLPTTSLVAGL*MSIHLSLFDST Trigger: TGTTGAATCAAAAAGTGATAAATGGATTGACATCCACAACCCAGCCACCAATGAAGTTGTTGGTAGGGTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085192.7 |
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