Pregenerated sensors for ALDH5A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035936Ensembl transcript IDs: ENSMUST00000037615.7
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGGGAGCCCCTGCTGTCCATTGGCCTGGTCTGTCACCCAGCTATaGAGGATGCTGAGGCAGGACAATAAGGAGCTCAAGGCCAACCAG | + |
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Preference number: 1 (lower is better) Translates to: AGSPCCPLAWSVTQL*RMLRQDNKELKANQ Trigger: CTGGTTGGCCTTGAGCTCCTTATTGTCCTGCCTCAGCATCCTCCATAGCTGGGTGACAGACCAGGCCAATGGACAGCAGGGGCTCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR CCA 90 bp | GTGAACATTCACTCTGTACCTTGTCCTGAGGCAGTGGGGTTGTGCTaGGGTCTCAGGACTGGCTGGGACCCACAGCCACAGGTATATGGC | + |
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Preference number: 1 (lower is better) Translates to: VNIHSVPCPEAVGLC*GLRTGWDPQPQVYG Trigger: GCCATATACCTGTGGCTGTGGGTCCCAGCCAGTCCTGAGACCCCAGCACAACCCCACTGCCTCAGGACAAGGTACAGAGTGAATGTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR TCA 90 bp | CCTGCTGTCCATTGGCCTGGTCTGTCACCCAGCTATGGAGGATGCTaGGGCAGGACAATAAGGAGCTCAAGGCCAACCAGTGTGACTTAT | + |
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Preference number: 1 (lower is better) Translates to: PAVHWPGLSPSYGGC*GRTIRSSRPTSVTY Trigger: ATAAGTCACACTGGTTGGCCTTGAGCTCCTTATTGTCCTGCCTCAGCATCCTCCATAGCTGGGTGACAGACCAGGCCAATGGACAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR GCA 90 bp | TATGTGAACATTCACTCTGTACCTTGTCCTGAGGCAGTGGGGTTGTaGTGGGGTCTCAGGACTGGCTGGGACCCACAGCCACAGGTATAT | + |
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Preference number: 1 (lower is better) Translates to: YVNIHSVPCPEAVGL*WGLRTGWDPQPQVY Trigger: ATATACCTGTGGCTGTGGGTCCCAGCCAGTCCTGAGACCCCAGCACAACCCCACTGCCTCAGGACAAGGTACAGAGTGAATGTTCACATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR CCA 90 bp | CTCTTCTGCAGGGTTAGCAGTGGCCACACCCTGGCACAGAAAGCCTaGGTCAGACTTATTCAGGTGAACAAGGAGGCACCTGGTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: LFCRVSSGHTLAQKA*VRLIQVNKEAPGFF Trigger: AAAGAAACCAGGTGCCTCCTTGTTCACCTGAATAAGTCTGACCCAGGCTTTCTGTGCCAGGGTGTGGCCACTGCTAACCCTGCAGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR GCA 90 bp | GTAGATGTCTCACAGAACATCCACAGAGTATGCCAGTGGGCTCTCTaGACAGATGGGCATGGAGCAGAGAACTCCTTTGTTGCCTATTGG | + |
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Preference number: 1 (lower is better) Translates to: VDVSQNIHRVCQWAL*TDGHGAENSFVAYW Trigger: CCAATAGGCAACAAAGGAGTTCTCTGCTCCATGCCCATCTGTGCAGAGAGCCCACTGGCATACTCTGTGGATGTTCTGTGAGACATCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR TCA 90 bp | CACTGGGCTCCGGCCTTCAGAGAGGACAAGCCACGGGATCCAATTTaGAGGTCATCACATCACAAAATAGGCTTGTCTACATTGTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: HWAPAFREDKPRDPI*RSSHHKIGLSTLCV Trigger: GACACACAATGTAGACAAGCCTATTTTGTGATGTGATGACCTTCAAATTGGATCCCGTGGCTTGTCCTCTCTGAAGGCCGGAGCCCAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR GCA 90 bp | AGAAATGTCGGAGTTGGCAAGGTGGCTCAGAAGTTAAGATTTGGCTaGCTTTCTTCAGAGGACCAGCTAGGATTTGCCTCCCCAAACTCA | + |
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Preference number: 1 (lower is better) Translates to: RNVGVGKVAQKLRFG*LSSEDQLGFASPNS Trigger: TGAGTTTGGGGAGGCAAATCCTAGCTGGTCCTCTGAAGAAAGGCAGCCAAATCTTAACTTCTGAGCCACCTTGCCAACTCCGACATTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR GCA 90 bp | TTGGGGTATGTGTGTGTGTGTGTATGTGTTTTGAATTTATGGGAGTaGATGCCTCTGGTGCATTTGTGGAGGTCAGAGGTCAACACTGTC | + |
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Preference number: 1 (lower is better) Translates to: LGYVCVCVCVLNLWE*MPLVHLWRSEVNTV Trigger: GACAGTGTTGACCTCTGACCTCCACAAATGCACCAGAGGCATGCACTCCCATAAATTCAAAACACATACACACACACACACATACCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR GCA 90 bp | GAAGTTAAGATTTGGCTGCCTTTCTTCAGAGGACCAGCTAGGATTTaGCTCCCCAAACTCACAAGGTGGACTACAACCATCTATAACTCC | + |
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Preference number: 1 (lower is better) Translates to: EVKIWLPFFRGPARI*LPKLTRWTTTIYNS Trigger: GGAGTTATAGATGGTTGTAGTCCACCTTGTGAGTTTGGGGAGGCAAATCCTAGCTGGTCCTCTGAAGAAAGGCAGCCAAATCTTAACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR TCA 90 bp | AAACTCACAAGGTGGACTACAACCATCTATAACTCCATTTCTAGGTaGTGCAATGCCCTTTTCTGGCCTCTTGAGGGAACCAGCACACAT | + |
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Preference number: 1 (lower is better) Translates to: KLTRWTTTIYNSISR*CNALFWPLEGTSTH Trigger: ATGTGTGCTGGTTCCCTCAAGAGGCCAGAAAAGGGCATTGCATCACCTAGAAATGGAGTTATAGATGGTTGTAGTCCACCTTGTGAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR CCA 90 bp | CAGCAAAGCCTTTACCCACCAAGCTATCTTGCAGGTCCCTGTGTGTaGTGCTTTGTTTTTGAATCACGAAGCATAAATGCTTTTCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: QQSLYPPSYLAGPCV*CFVFESRSINAFPR Trigger: CCTAGGAAAAGCATTTATGCTTCGTGATTCAAAAACAAAGCACCACACACAGGGACCTGCAAGATAGCTTGGTGGGTAAAGGCTTTGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR GCA 90 bp | ACTGGCAATTGTGGGAATAATTTTTCACAGTGGTTAAAATGTATTTaGTCTTCTGCAGGGTTAGCAGTGGCCACACCCTGGCACAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: TGNCGNNFSQWLKCI*SSAGLAVATPWHRK Trigger: CTTTCTGTGCCAGGGTGTGGCCACTGCTAACCCTGCAGAAGAGCAAATACATTTTAACCACTGTGAAAAATTATTCCCACAATTGCCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR GCA 90 bp | CAAAGCCTTTACCCACCAAGCTATCTTGCAGGTCCCTGTGTGTGGTaGTTTGTTTTTGAATCACGAAGCATAAATGCTTTTCCTAGGACA | + |
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Preference number: 1 (lower is better) Translates to: QSLYPPSYLAGPCVW*FVFESRSINAFPRT Trigger: TGTCCTAGGAAAAGCATTTATGCTTCGTGATTCAAAAACAAAGCACCACACACAGGGACCTGCAAGATAGCTTGGTGGGTAAAGGCTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR TCA 90 bp | TTTCAGGAAACAACTGTTCTAACCCACCCAATCCATTGGGACATATaGAAACACTTTAAACTCATGAGTTATACAAAATCAGGTGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: FQETTVLTHPIHWDI*KHFKLMSYTKSGGR Trigger: CCTGCCACCTGATTTTGTATAACTCATGAGTTTAAAGTGTTTTCATATGTCCCAATGGATTGGGTGGGTTAGAACAGTTGTTTCCTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR TCA 90 bp | GGGCACAGAGCCCTAAACAGCATACCTAAGGCAGTAGGAGGCAGCTGGGAGCCCCTCTGTACCTTGTCCTaGGGCAGTGGGGTTGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: GHRALNSIPKAVGGSWEPLCTLS*GSGVVL Trigger: CAGCACAACCCCACTGCCTCAGGACAAGGTACAGAG...GGGCTCCCAGCTGCCTCCTACTGCCTTAGGTATGCTGTTTAGGGCTCTGTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR CAA 90 bp | GGGTATGTGAACATTCACTCTGTACCTTGTCCTGAGGCAGTGGGGTaGTGCTGGGGTCTCAGGACTGGCTGGGACCCACAGCCACAGGTA | + |
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Preference number: 2 (lower is better) Translates to: GYVNIHSVPCPEAVG*CWGLRTGWDPQPQV Trigger: TACCTGTGGCTGTGGGTCCCAGCCAGTCCTGAGACCCCAGCACAACCCCACTGCCTCAGGACAAGGTACAGAGTGAATGTTCACATACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR GCA 90 bp | TGCAATGCCCTTTTCTGGCCTCTTGAGGGAACCAGCACACATGTGGTGCACAGATGCCAGTGGGCTCTCTaGACAGATGGGCATGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: CNALFWPLEGTSTHVVHRCQWAL*TDGHGA Trigger: TGCTCCATGCCCATCTGTGCAGAGAGCCCACTGGCA...TCTGTGCACCACATGTGTGCTGGTTCCCTCAAGAGGCCAGAAAAGGGCATTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR CCA 90 bp | TGCAATGCCCTTTTCTGGCCTCTTGAGGGAACCAGCACACATGTGGTGCACAGAGGCTCTCTGCACAGATaGGCATGGAGCAGAGAACTC | + |
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Preference number: 2 (lower is better) Translates to: CNALFWPLEGTSTHVVHRGSLHR*AWSREL Trigger: GAGTTCTCTGCTCCATGCCCATCTGTGCAGAGAGCC...TCTGTGCACCACATGTGTGCTGGTTCCCTCAAGAGGCCAGAAAAGGGCATTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTTCTTCAGAGGACCAGCTAGGATTTGCCTCCCCAAACTCACAAGGTGGACCCCCGCCCACACAATaGCTATACTTTGTGAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: CLSSEDQLGFASPNSQGGPPPTQ*LYFVRC Trigger: GCACCTCACAAAGTATAGTCATTGTGTGGGCGGGGG...TCCACCTTGTGAGTTTGGGGAGGCAAATCCTAGCTGGTCCTCTGAAGAAAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR GCA 90 bp | TGCAATGCCCTTTTCTGGCCTCTTGAGGGAACCAGCACACATGTGGTGCACAGACCTCGTCCCTTTCCCTaGGTTCTGAACCAAAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: CNALFWPLEGTSTHVVHRPRPFP*VLNQSC Trigger: GCAACTTTGGTTCAGAACGCAGGGAAAGGGACGAGG...TCTGTGCACCACATGTGTGCTGGTTCCCTCAAGAGGCCAGAAAAGGGCATTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR GCA 90 bp | TATCATTCCTGTAGATGTCTCACAGAACATCCACAGAGTATGCCAGTGGGCTCTGCAGCTGGGAGCCCCTaGTGTCCATTGGCCTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: YHSCRCLTEHPQSMPVGSAAGSP*CPLAWS Trigger: AGACCAGGCCAATGGACAGCAGGGGCTCCCAGCTGC...AGAGCCCACTGGCATACTCTGTGGATGTTCTGTGAGACATCTACAGGAATGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR TCA 90 bp | CAAAGCCTTTACCCACCAAGCTATCTTGCAGGTCCCTGTGTGTGGTGCTTTGTTGAACAGGCAGCCAGCTaGTCATCAACGCTGACAGGT | + |
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Preference number: 2 (lower is better) Translates to: QSLYPPSYLAGPCVWCFVEQAAS*SSTLTG Trigger: ACCTGTCAGCGTTGATGATCAGCTGGCTGCCTGTTC...AACAAAGCACCACACACAGGGACCTGCAAGATAGCTTGGTGGGTAAAGGCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR GCA 90 bp | AGTTCAAGGAGGGGGCAGCGAGGTACTGCTTGTAATCAAAATGGTTCCTGGAGTGGAACCCAAAGCCTTTaGCACAACCCCCTGGAACAG | + |
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Preference number: 2 (lower is better) Translates to: SSRRGQRGTACNQNGSWSGTQSL*HNPLEQ Trigger: CTGTTCCAGGGGGTTGTGGCAAAGGCTTTGGGTTCC...ACTCCAGGAACCATTTTGATTACAAGCAGTACCTCGCTGCCCCCTCCTTGAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR GCA 90 bp | TGCCTTTCTTCAGAGGACCAGCTAGGATTTGCCTCCCCAAACTCACAAGGTGGAAGTGCATGCCTCTGGTaGATTTGTGGAGGTCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: CLSSEDQLGFASPNSQGGSACLW*ICGGQR Trigger: CCTCTGACCTCCACAAATGCACCAGAGGCATGCACT...TCCACCTTGTGAGTTTGGGGAGGCAAATCCTAGCTGGTCCTCTGAAGAAAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR CCA 90 bp | ACCTGTGAGTTTGAAAGCCAGCTAGGCTACTTAGCAAGACCCTGTCGCATAAAGTTTGCCACAACCCCCTaGAACAGGCAGCCAGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: TCEFESQLGYLARPCRIKFATTP*NRQPAD Trigger: ATCAGCTGGCTGCCTGTTCCAGGGGGTTGTGGCAAA...CTTTATGCGACAGGGTCTTGCTAAGTAGCCTAGCTGGCTTTCAAACTCACAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR CAA 90 bp | AGGTCACCAGGCTTGTCCAGCAAAGCCTTTACCCACCAAGCTATCTaGCAGGTCCCTGTGTGTGGTGCTTTGTTTTTGAATCACGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: RSPGLSSKAFTHQAI*QVPVCGALFLNHEA Trigger: TGCTTCGTGATTCAAAAACAAAGCACCACACACAGGGACCTGCAAGATAGCTTGGTGGGTAAAGGCTTTGCTGGACAAGCCTGGTGACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTGGGCCAGTGATCTACCCAGTAAATCAAACATGCACACACAAAAAGTACGCAGTAGGAGGCAGCTaGGAGCCCCTGCTGTCCATT | + |
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Preference number: 2 (lower is better) Translates to: MCGPVIYPVNQTCTHKKYAVGGS*EPLLSI Trigger: AATGGACAGCAGGGGCTCCCAGCTGCCTCCTACTGC...GTACTTTTTGTGTGTGCATGTTTGATTTACTGGGTAGATCACTGGCCCACACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR TCA 90 bp | GCACTTGCTTTGGGGCCCTGCTTAAAGGCCCTCAGATGTAAAACACAGATGAACTCAGACTTATTCAGGTaGACAAGGAGGCACCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: ALALGPCLKALRCKTQMNSDLFR*TRRHLV Trigger: AACCAGGTGCCTCCTTGTTCACCTGAATAAGTCTGA...GTTCATCTGTGTTTTACATCTGAGGGCCTTTAAGCAGGGCCCCAAAGCAAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR CAA 90 bp | GTCCCAGAAGAGCAAAGATACCGAAAGAAGAACCAAGCACTTGCTTaGGGGCCCTGCTTAAAGGCCCTCAGATGTAAAACACAGATGAAC | + |
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Preference number: 2 (lower is better) Translates to: VPEEQRYRKKNQALA*GPCLKALRCKTQMN Trigger: GTTCATCTGTGTTTTACATCTGAGGGCCTTTAAGCAGGGCCCCAAAGCAAGTGCTTGGTTCTTCTTTCGGTATCTTTGCTCTTCTGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR GCA 90 bp | TCTTGCCACTTGGGTGGGGTCCCTAGGATGAAGACTTCTACTTTATTCTTATGCAACATCCACAGAGTATaGCAGTGGGCTCTCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: SCHLGGVPRMKTSTLFLCNIHRV*QWALCT Trigger: TGTGCAGAGAGCCCACTGGCATACTCTGTGGATGTT...GCATAAGAATAAAGTAGAAGTCTTCATCCTAGGGACCCCACCCAAGTGGCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR CCA 90 bp | CACTCACAGGTTTCAGGAAACAACTGTTCTAACCCACCCAATCCATTGGGACATCCTCTGGTGCATTTGTaGAGGTCAGAGGTCAACACT | + |
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Preference number: 2 (lower is better) Translates to: HSQVSGNNCSNPPNPLGHPLVHL*RSEVNT Trigger: AGTGTTGACCTCTGACCTCCACAAATGCACCAGAGG...ATGTCCCAATGGATTGGGTGGGTTAGAACAGTTGTTTCCTGAAACCTGTGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR CAA 90 bp | TGTGTATGTGTTTTGAATTTATGGGAGTGCATGCCTCTGGTGCATTaGTGGAGGTCAGAGGTCAACACTGTCACGTTGGTTCTCTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: CVCVLNLWECMPLVH*WRSEVNTVTLVLSV Trigger: GACAGAGAGAACCAACGTGACAGTGTTGACCTCTGACCTCCACAAATGCACCAGAGGCATGCACTCCCATAAATTCAAAACACATACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR CAA 90 bp | TCTATAACTCCATTTCTAGGTGATGCAATGCCCTTTTCTGGCCTCTaGAGGGAACCAGCACACATGTGGTGCACAGATATACATAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: SITPFLGDAMPFSGL*REPAHMWCTDIHRG Trigger: GCCTCTATGTATATCTGTGCACCACATGTGTGCTGGTTCCCTCAAGAGGCCAGAAAAGGGCATTGCATCACCTAGAAATGGAGTTATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR TCA 90 bp | TTAAAATGTATTTGCTCTTCTGCAGGGTTAGCAGTGGCCACACCCTGGCACAGAAATGACTATACTTTGTaGGGTGCCAGAGGGTATGTG | + |
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Preference number: 2 (lower is better) Translates to: LKCICSSAGLAVATPWHRNDYTL*GARGYV Trigger: CACATACCCTCTGGCACCTCACAAAGTATAGTCATT...TCTGTGCCAGGGTGTGGCCACTGCTAACCCTGCAGAAGAGCAAATACATTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR TCA 90 bp | CACCAAGCTATCTTGCAGGTCCCTGTGTGTGGTGCTTTGTTTTTGAATCACGAACCTTTAAGCCAAGCATaGATCTCTACACATGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: HQAILQVPVCGALFLNHEPLSQA*ISTHGA Trigger: TGCCCCATGTGTAGAGATTCATGCTTGGCTTAAAGG...TTCGTGATTCAAAAACAAAGCACCACACACAGGGACCTGCAAGATAGCTTGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR GCA 90 bp | TGTGACTCTTGCCACTTGGGTGGGGTCCCTAGGATGAAGACTTCTACTTTATTCGGTCCCTGTGTGTGGTaGTTTGTTTTTGAATCACGA | + |
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Preference number: 2 (lower is better) Translates to: CDSCHLGGVPRMKTSTLFGPCVW*FVFESR Trigger: TCGTGATTCAAAAACAAAGCACCACACACAGGGACC...GAATAAAGTAGAAGTCTTCATCCTAGGGACCCCACCCAAGTGGCAAGAGTCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR GCA 90 bp | CACTCACAGGTTTCAGGAAACAACTGTTCTAACCCACCCAATCCATTGGGACATCACAGTCCAGGAACCTaGTGGTTGACACTGTTTAAC | + |
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Preference number: 2 (lower is better) Translates to: HSQVSGNNCSNPPNPLGHHSPGT*WLTLFN Trigger: GTTAAACAGTGTCAACCAGCAGGTTCCTGGACTGTG...ATGTCCCAATGGATTGGGTGGGTTAGAACAGTTGTTTCCTGAAACCTGTGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR CCA 90 bp | TCTTGCCACTTGGGTGGGGTCCCTAGGATGAAGACTTCTACTTTATTCTTATGCCAGCTTCTAGGTAGATaGGAGCCATGTCTACAAGGA | + |
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Preference number: 2 (lower is better) Translates to: SCHLGGVPRMKTSTLFLCQLLGR*EPCLQG Trigger: TCCTTGTAGACATGGCTCCCATCTACCTAGAAGCTG...GCATAAGAATAAAGTAGAAGTCTTCATCCTAGGGACCCCACCCAAGTGGCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR CCA 90 bp | GCACTTGCTTTGGGGCCCTGCTTAAAGGCCCTCAGATGTAAAACACAGATGAACAAGTTCCCAGTGACTTaGGACTTAGTGTTTAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: ALALGPCLKALRCKTQMNKFPVT*DLVFRN Trigger: GTTCCTAAACACTAAGTCCCAAGTCACTGGGAACTT...GTTCATCTGTGTTTTACATCTGAGGGCCTTTAAGCAGGGCCCCAAAGCAAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR CCA 90 bp | TGTGACTCTTGCCACTTGGGTGGGGTCCCTAGGATGAAGACTTCTACTTTATTCTCAACACTGTCACGTTaGTTCTCTCTGTCTTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: CDSCHLGGVPRMKTSTLFSTLSR*FSLSFC Trigger: ACAGAAAGACAGAGAGAACCAACGTGACAGTGTTGA...GAATAAAGTAGAAGTCTTCATCCTAGGGACCCCACCCAAGTGGCAAGAGTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR TCA 90 bp | CACTCACAGGTTTCAGGAAACAACTGTTCTAACCCACCCAATCCATTGGGACATGCCTCCAGTTTAGGTTaGTTTTCTACGAGGAACAAA | + |
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Preference number: 2 (lower is better) Translates to: HSQVSGNNCSNPPNPLGHASSLG*FSTRNK Trigger: TTTGTTCCTCGTAGAAAATCAACCTAAACTGGAGGC...ATGTCCCAATGGATTGGGTGGGTTAGAACAGTTGTTTCCTGAAACCTGTGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR-3UTR TCA 90 bp | ATGTGTGGGCCAGTGATCTACCCAGTAAATCAAACATGCACACACAAAAAGTACAACTCCATTTCTAGGTaGTGCAATGCCCTTTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: MCGPVIYPVNQTCTHKKYNSISR*CNALFW Trigger: CCAGAAAAGGGCATTGCATCACCTAGAAATGGAGTT...GTACTTTTTGTGTGTGCATGTTTGATTTACTGGGTAGATCACTGGCCCACACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR CAA 90 bp | AGATGGGAGCCATGTCTACAAGGACCTAGATTTTCCTTACTTAAATaGTTTCAAAGGGAGATCAACACCAGTTTCGGGGAGTTTCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: RWEPCLQGPRFSLLK*FQREINTSFGEFQC Trigger: ACACTGAAACTCCCCGAAACTGGTGTTGATCTCCCTTTGAAACAATTTAAGTAAGGAAAATCTAGGTCCTTGTAGACATGGCTCCCATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR TCA 72 bp | ACCCCCTGGAACAGGCAGCCAGCTGATCATCAACGCTaGCAGGTGCCTAGGCAGGGATGCGCACCTCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: TPWNRQPADHQR*QVPRQGCAPPP Trigger: AGGAGGAGGTGCGCATCCCTGCCTAGGCACCTGTCAGCGTTGATGATCAGCTGGCTGCCTGTTCCAGGGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR CCA 72 bp | GAGGCAGTGGGGTTGTGCTGGGGTCTCAGGACTGGCTaGGACCCACAGCCACAGGTATATGGCATCTATTGG | + |
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Preference number: 3 (lower is better) Translates to: EAVGLCWGLRTG*DPQPQVYGIYW Trigger: CCAATAGATGCCATATACCTGTGGCTGTGGGTCCCAGCCAGTCCTGAGACCCCAGCACAACCCCACTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR CCA 72 bp | GCCCTAAACAGCATACCTAAGGCAGTAGGAGGCAGCTaGGAGCCCCTGCTGTCCATTGGCCTGGTCTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: ALNSIPKAVGGS*EPLLSIGLVCH Trigger: GTGACAGACCAGGCCAATGGACAGCAGGGGCTCCCAGCTGCCTCCTACTGCCTTAGGTATGCTGTTTAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR-3UTR CAA 90 bp | TGCAATGCCCTTTTCTGGCCTCTTGAGGGAACCAGCACACATGTGGTGCACAGATGTGACTCTTGCCACTaGGGTGGGGTCCCTAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: CNALFWPLEGTSTHVVHRCDSCH*GGVPRM Trigger: CATCCTAGGGACCCCACCCAAGTGGCAAGAGTCACA...TCTGTGCACCACATGTGTGCTGGTTCCCTCAAGAGGCCAGAAAAGGGCATTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR TCA 72 bp | CAGAGGGTATGTGAACATTCACTCTGTACCTTGTCCTaGGGCAGTGGGGTTGTGCTGGGGTCTCAGGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: QRVCEHSLCTLS*GSGVVLGSQDW Trigger: CCAGTCCTGAGACCCCAGCACAACCCCACTGCCTCAGGACAAGGTACAGAGTGAATGTTCACATACCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR TCA 72 bp | AGGCACCTGGTTTCTTTCCTCCACGAAGTCACCTCCTaGGTTCAAGGAGGGGGCAGCGAGGTACTGCTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: RHLVSFLHEVTS*VQGGGSEVLLV Trigger: TACAAGCAGTACCTCGCTGCCCCCTCCTTGAACTCAGGAGGTGACTTCGTGGAGGAAAGAAACCAGGTGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR-3UTR CAA 90 bp | TGCAATGCCCTTTTCTGGCCTCTTGAGGGAACCAGCACACATGTGGTGCACAGACTCAGGTCACCAGGCTaGTCCAGCAAAGCCTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: CNALFWPLEGTSTHVVHRLRSPG*SSKAFT Trigger: GGTAAAGGCTTTGCTGGACAAGCCTGGTGACCTGAG...TCTGTGCACCACATGTGTGCTGGTTCCCTCAAGAGGCCAGAAAAGGGCATTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCAAGGAGGGGGCAGCGAGGTACTGCTTGTAATCAAAATGGTTCCTGGAGTAGGAACCCAAAGCCTTaGCCACAACCCCCTGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: SSRRGQRGTACNQNGSWSRNPKP*PQPPGT Trigger: TGTTCCAGGGGGTTGTGGCAAAGGCTTTGGGTTCCT...ACTCCAGGAACCATTTTGATTACAAGCAGTACCTCGCTGCCCCCTCCTTGAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR GCA 72 bp | GGAGTTGGCAAGGTGGCTCAGAAGTTAAGATTTGGCTaGCTTTCTTCAGAGGACCAGCTAGGATTTGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GVGKVAQKLRFG*LSSEDQLGFAS Trigger: GGAGGCAAATCCTAGCTGGTCCTCTGAAGAAAGGCAGCCAAATCTTAACTTCTGAGCCACCTTGCCAACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR CCA 72 bp | TCAGTGGCAGAACACACGCTAGTATGCACAAGGCCATaGACTCAACACCCAGCTCTGGAGAAGAAACAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SVAEHTLVCTRP*TQHPALEKKQS Trigger: GCTTTGTTTCTTCTCCAGAGCTGGGTGTTGAGTCCATGGCCTTGTGCATACTAGCGTGTGTTCTGCCACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTTTCTTCAGAGGACCAGCTAGGATTTGCCTCCCCAAACTCACAAGGTGGAGTCAACACTGTCACGTaGGTTCTCTCTGTCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CLSSEDQLGFASPNSQGGVNTVT*VLSVFL Trigger: CAGAAAGACAGAGAGAACCAACGTGACAGTGTTGAC...TCCACCTTGTGAGTTTGGGGAGGCAAATCCTAGCTGGTCCTCTGAAGAAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR TCA 72 bp | TCCCTTCCAGGCTCACAAAGTCCTTTAAGCCAAGCATaGATCTCTACACATGGGGCACAGAGCCCTAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: SLPGSQSPLSQA*ISTHGAQSPKQ Trigger: CTGTTTAGGGCTCTGTGCCCCATGTGTAGAGATTCATGCTTGGCTTAAAGGACTTTGTGAGCCTGGAAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR GCA 72 bp | ATTTGGCTGCCTTTCTTCAGAGGACCAGCTAGGATTTaGCTCCCCAAACTCACAAGGTGGACTACAACCATC | + |
|
Preference number: 3 (lower is better) Translates to: IWLPFFRGPARI*LPKLTRWTTTI Trigger: GATGGTTGTAGTCCACCTTGTGAGTTTGGGGAGGCAAATCCTAGCTGGTCCTCTGAAGAAAGGCAGCCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR CCA 72 bp | TGTCGGAGTTGGCAAGGTGGCTCAGAAGTTAAGATTTaGCTGCCTTTCTTCAGAGGACCAGCTAGGATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: CRSWQGGSEVKI*LPFFRGPARIC Trigger: GCAAATCCTAGCTGGTCCTCTGAAGAAAGGCAGCCAAATCTTAACTTCTGAGCCACCTTGCCAACTCCGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR TCA 72 bp | CCGGCCTTCAGAGAGGACAAGCCACGGGATCCAATTTaGAGGTCATCACATCACAAAATAGGCTTGTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: PAFREDKPRDPI*RSSHHKIGLST Trigger: TGTAGACAAGCCTATTTTGTGATGTGATGACCTTCAAATTGGATCCCGTGGCTTGTCCTCTCTGAAGGCCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR CCA 72 bp | TTGAATTTATGGGAGTGCATGCCTCTGGTGCATTTGTaGAGGTCAGAGGTCAACACTGTCACGTTGGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LNLWECMPLVHL*RSEVNTVTLVL Trigger: GAGAACCAACGTGACAGTGTTGACCTCTGACCTCCACAAATGCACCAGAGGCATGCACTCCCATAAATTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGCCTTTACCCACCAAGCTATCTTGCAGGTCCCTGTGTGTGGTGCTTTGTTAAATGGTTCCTGGAGTaGAGCTGCATTTCCACCATT | + |
|
Preference number: 3 (lower is better) Translates to: QSLYPPSYLAGPCVWCFVKWFLE*SCISTI Trigger: AATGGTGGAAATGCAGCTCAACTCCAGGAACCATTT...AACAAAGCACCACACACAGGGACCTGCAAGATAGCTTGGTGGGTAAAGGCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR-3UTR CAA 90 bp | TATCATTCCTGTAGATGTCTCACAGAACATCCACAGAGTATGCCAGTGGGCTCTGGGGAGTTTCAGTGTTaGGGGTATGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: YHSCRCLTEHPQSMPVGSGEFQC*GYVCVC Trigger: ACACACACACACATACCCCAAACACTGAAACTCCCC...AGAGCCCACTGGCATACTCTGTGGATGTTCTGTGAGACATCTACAGGAATGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR TCA 72 bp | AGGTGGACTACAACCATCTATAACTCCATTTCTAGGTaGTGCAATGCCCTTTTCTGGCCTCTTGAGGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: RWTTTIYNSISR*CNALFWPLEGT Trigger: GGTTCCCTCAAGAGGCCAGAAAAGGGCATTGCATCACCTAGAAATGGAGTTATAGATGGTTGTAGTCCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR GCA 72 bp | TTTTCTGGCCTCTTGAGGGAACCAGCACACATGTGGTaGACAGATATACATAGAGGCAAAATGCCATGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: FSGLLREPAHMW*TDIHRGKMPCP Trigger: TGGACATGGCATTTTGCCTCTATGTATATCTGTGCACCACATGTGTGCTGGTTCCCTCAAGAGGCCAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR GCA 72 bp | TGTGGGAATAATTTTTCACAGTGGTTAAAATGTATTTaGTCTTCTGCAGGGTTAGCAGTGGCCACACCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CGNNFSQWLKCI*SSAGLAVATPW Trigger: CCAGGGTGTGGCCACTGCTAACCCTGCAGAAGAGCAAATACATTTTAACCACTGTGAAAAATTATTCCCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR GCA 72 bp | TACCCACCAAGCTATCTTGCAGGTCCCTGTGTGTGGTaGTTTGTTTTTGAATCACGAAGCATAAATGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: YPPSYLAGPCVW*FVFESRSINAF Trigger: AAAAGCATTTATGCTTCGTGATTCAAAAACAAAGCACCACACACAGGGACCTGCAAGATAGCTTGGTGGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR GCA 72 bp | GGGGTCCCTAGGATGAAGACTTCTACTTTATTCTTATaGTCAGGGACCTTAAGAACCATGACGTCCTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: GVPRMKTSTLFL*SGTLRTMTSLF Trigger: AAATAAGGACGTCATGGTTCTTAAGGTCCCTGAGCATAAGAATAAAGTAGAAGTCTTCATCCTAGGGACCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR CCA 72 bp | TTGTTGCCTATTGGGGATAAACAGCTTCTAGGTAGATaGGAGCCATGTCTACAAGGACCTAGATTTTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LLPIGDKQLLGR*EPCLQGPRFSL Trigger: TAAGGAAAATCTAGGTCCTTGTAGACATGGCTCCCATCTACCTAGAAGCTGTTTATCCCCAATAGGCAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR-3UTR CAA 90 bp | GTATGTGTGTGTGTGTGTATGTGTTTTGAATTTATGGGAGTGCATGCCTCTGGTTGCCTCCAGTTTAGGTaGATTTTCTACGAGGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVCMCFEFMGVHASGCLQFR*IFYEEQ Trigger: TTGTTCCTCGTAGAAAATCAACCTAAACTGGAGGCA...ACCAGAGGCATGCACTCCCATAAATTCAAAACACATACACACACACACACATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR TCA 72 bp | TCACATCACAAAATAGGCTTGTCTACATTGTGTGTCTaGTCTTTATTCTCCCCCAAGTCCCAGAAGAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SHHKIGLSTLCV*SLFSPKSQKSK Trigger: TTTGCTCTTCTGGGACTTGGGGGAGAATAAAGATCAGACACACAATGTAGACAAGCCTATTTTGTGATGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR TCA 72 bp | TTTAGGTTGATTTTCTACGAGGAACAAAATGAAGCATaGGCCGTAAGTTTAAAGTTTAGGGCATTGGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: FRLIFYEEQNEA*AVSLKFRALET Trigger: AGTCTCCAATGCCCTAAACTTTAAACTTACGGCTCATGCTTCATTTTGTTCCTCGTAGAAAATCAACCTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR CCA 72 bp | GACATCTTCAAAAACTCCCACCTGTTACATATCTTATaGAACAGTAACAAAGGTTCATCGAAAAACACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: DIFKNSHLLHIL*NSNKGSSKNTP Trigger: AGGAGTGTTTTTCGATGAACCTTTGTTACTGTTCCATAAGATATGTAACAGGTGGGAGTTTTTGAAGATGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR TCA 72 bp | ACAACTGTTCTAACCCACCCAATCCATTGGGACATATaGAAACACTTTAAACTCATGAGTTATACAAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: TTVLTHPIHWDI*KHFKLMSYTKS Trigger: TGATTTTGTATAACTCATGAGTTTAAAGTGTTTTCATATGTCCCAATGGATTGGGTGGGTTAGAACAGTTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS-3UTR CCA 90 bp | CACTCACAGGTTTCAGGAAACAACTGTTCTAACCCACCCAATCCATTGGGACATCGTACACCGGGAAGGTaGCGGGGGCTGGGAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSQVSGNNCSNPPNPLGHRTPGR*RGLGAS Trigger: GCTGGCTCCCAGCCCCCGCCACCTTCCCGGTGTACG...ATGTCCCAATGGATTGGGTGGGTTAGAACAGTTGTTTCCTGAAACCTGTGAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS-3UTR TCA 90 bp | TGTGACTCTTGCCACTTGGGTGGGGTCCCTAGGATGAAGACTTCTACTTTATTCGCCTGGTTTGCAAGCTaGGCCAGGGCCAGGGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CDSCHLGGVPRMKTSTLFAWFAS*ARARAE Trigger: TTCCGCCCTGGCCCTGGCTCAGCTTGCAAACCAGGC...GAATAAAGTAGAAGTCTTCATCCTAGGGACCCCACCCAAGTGGCAAGAGTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS-3UTR GCA 90 bp | TGCCTTTCTTCAGAGGACCAGCTAGGATTTGCCTCCCCAAACTCACAAGGTGGACATTCACACCGACCATaGCGACCTCCAGCTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CLSSEDQLGFASPNSQGGHSHRP*RPPAAP Trigger: CGGAGCAGCTGGAGGTCGGCATGGTCGGTGTGAATG...TCCACCTTGTGAGTTTGGGGAGGCAAATCCTAGCTGGTCCTCTGAAGAAAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS-3UTR GCA 90 bp | GGGCACAGAGCCCTAAACAGCATACCTAAGGCAGTAGGAGGCAGCTGGGAGCCCAGAGTAAAAGTAACCTaGCAATCCAACCTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GHRALNSIPKAVGGSWEPRVKVT*QSNLSC Trigger: GCAGCTGAGGTTGGATTGGCAGGTTACTTTTACTCT...GGGCTCCCAGCTGCCTCCTACTGCCTTAGGTATGCTGTTTAGGGCTCTGTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS-3UTR GCA 90 bp | AGTTCAAGGAGGGGGCAGCGAGGTACTGCTTGTAATCAAAATGGTTCCTGGAGTATGCCGACCTCCAGCTaGTCCGCCACTCTCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SSRRGQRGTACNQNGSWSMPTSS*SATLQI Trigger: GATCTGGAGAGTGGCGGAGCAGCTGGAGGTCGGCAT...ACTCCAGGAACCATTTTGATTACAAGCAGTACCTCGCTGCCCCCTCCTTGAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS-3UTR GCA 90 bp | AGTTCAAGGAGGGGGCAGCGAGGTACTGCTTGTAATCAAAATGGTTCCTGGAGTAACCTCAGCTGCATTTaGGATGGCGACGGCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSRRGQRGTACNQNGSWSNLSCI*DGDGLF Trigger: GAAGAGGCCGTCGCCATCGCAAATGCAGCTGAGGTT...ACTCCAGGAACCATTTTGATTACAAGCAGTACCTCGCTGCCCCCTCCTTGAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS-3UTR CCA 90 bp | ATGTGTGGGCCAGTGATCTACCCAGTAAATCAAACATGCACACACAAAAAGTACGCCCCCGCGACGGCCTaGTCTACGTTGGCACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MCGPVIYPVNQTCTHKKYAPATA*STLALS Trigger: TGACAGTGCCAACGTAGACCAGGCCGTCGCGGGGGC...GTACTTTTTGTGTGTGCATGTTTGATTTACTGGGTAGATCACTGGCCCACACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS-3UTR CCA 90 bp | GTGGCTCAGAAGTTAAGATTTGGCTGCCTTTCTTCAGAGGACCAGCTAGGATTTCGTCAATGCCATACTTaGACCCCTCGCGCCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VAQKLRFGCLSSEDQLGFRQCHT*TPRAQG Trigger: GCCTTGGGCGCGAGGGGTCCAAGTATGGCATTGACG...AAATCCTAGCTGGTCCTCTGAAGAAAGGCAGCCAAATCTTAACTTCTGAGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS-3UTR GCA 90 bp | CAAAGCCTTTACCCACCAAGCTATCTTGCAGGTCCCTGTGTGTGGTGCTTTGTTCTAGGTACTCGTCAATaGCATACTTGGACCCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QSLYPPSYLAGPCVWCFVLGTRQ*HTWTPR Trigger: GCGAGGGGTCCAAGTATGGCATTGACGAGTACCTAG...AACAAAGCACCACACACAGGGACCTGCAAGATAGCTTGGTGGGTAAAGGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS-3UTR CCA 90 bp | TCTTGCCACTTGGGTGGGGTCCCTAGGATGAAGACTTCTACTTTATTCTTATGCCTGGGCCTCTTTCAGTaGCTTTCCACTCTCGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCHLGGVPRMKTSTLFLCLGLFQ*LSTLGC Trigger: ACAGCCGAGAGTGGAAAGCCACTGAAAGAGGCCCAG...GCATAAGAATAAAGTAGAAGTCTTCATCCTAGGGACCCCACCCAAGTGGCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS-3UTR TCA 90 bp | CAAAGCCTTTACCCACCAAGCTATCTTGCAGGTCCCTGTGTGTGGTGCTTTGTTATTCCACTGAAGAGATaGGCCCTTCATTCACACCGA | + |
|
Preference number: 4 (lower is better) Translates to: QSLYPPSYLAGPCVWCFVIPLKR*ALHSHR Trigger: TCGGTGTGAATGAAGGGCTCATCTCTTCAGTGGAAT...AACAAAGCACCACACACAGGGACCTGCAAGATAGCTTGGTGGGTAAAGGCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS-3UTR CCA 90 bp | TCTTGCCACTTGGGTGGGGTCCCTAGGATGAAGACTTCTACTTTATTCTTATGCGGCCACCCAACTCCATaGAGACACGCTTCACAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SCHLGGVPRMKTSTLFLCGHPTP*RHASQN Trigger: ATTCTGTGAAGCGTGTCTCCATGGAGTTGGGTGGCC...GCATAAGAATAAAGTAGAAGTCTTCATCCTAGGGACCCCACCCAAGTGGCAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR CAA 72 bp | GGCTTGTCCAGCAAAGCCTTTACCCACCAAGCTATCTaGCAGGTCCCTGTGTGTGGTGCTTTGTTTTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLSSKAFTHQAI*QVPVCGALFLN Trigger: ATTCAAAAACAAAGCACCACACACAGGGACCTGCAAGATAGCTTGGTGGGTAAAGGCTTTGCTGGACAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR CAA 72 bp | TCTGCACAGATGGGCATGGAGCAGAGAACTCCTTTGTaGCCTATTGGGGATAAACAGCTTCTAGGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SAQMGMEQRTPL*PIGDKQLLGRW Trigger: CCATCTACCTAGAAGCTGTTTATCCCCAATAGGCAACAAAGGAGTTCTCTGCTCCATGCCCATCTGTGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR CAA 72 bp | CTCTCTGCACAGATGGGCATGGAGCAGAGAACTCCTTaGTTGCCTATTGGGGATAAACAGCTTCTAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSAQMGMEQRTP*LPIGDKQLLGR Trigger: TCTACCTAGAAGCTGTTTATCCCCAATAGGCAACAAAGGAGTTCTCTGCTCCATGCCCATCTGTGCAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR CAA 72 bp | CAGACCATGAACATCCTGAGTTGTGACTCTTGCCACTaGGGTGGGGTCCCTAGGATGAAGACTTCTACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QTMNILSCDSCH*GGVPRMKTSTL Trigger: TAAAGTAGAAGTCTTCATCCTAGGGACCCCACCCAAGTGGCAAGAGTCACAACTCAGGATGTTCATGGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR CAA 72 bp | TCCGGCCTTCAGAGAGGACAAGCCACGGGATCCAATTaGAAGGTCATCACATCACAAAATAGGCTTGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SGLQRGQATGSN*KVITSQNRLVY Trigger: GTAGACAAGCCTATTTTGTGATGTGATGACCTTCAAATTGGATCCCGTGGCTTGTCCTCTCTGAAGGCCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS-3UTR TCA 90 bp | TGCCTTTCTTCAGAGGACCAGCTAGGATTTGCCTCCCCAAACTCACAAGGTGGACTTTCCCGTTGCTGTTaGGCCAGTAAAGGAAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLSSEDQLGFASPNSQGGLSRCC*ASKGNF Trigger: AAAATTTCCTTTACTGGCTCAACAGCAACGGGAAAG...TCCACCTTGTGAGTTTGGGGAGGCAAATCCTAGCTGGTCCTCTGAAGAAAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS-3UTR TCA 90 bp | GTATGTGTGTGTGTGTGTATGTGTTTTGAATTTATGGGAGTGCATGCCTCTGGTCACTGTCAAAGACAATaGATGGGGCGAGGCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCMCFEFMGVHASGHCQRQ*MGRGHP Trigger: TGGGTGGCCTCGCCCCATTCATTGTCTTTGACAGTG...ACCAGAGGCATGCACTCCCATAAATTCAAAACACATACACACACACACACATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS-3UTR TCA 90 bp | CAAAGCCTTTACCCACCAAGCTATCTTGCAGGTCCCTGTGTGTGGTGCTTTGTTTTAATTAACGGCCCTTaGGTCGTTCCTTCCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QSLYPPSYLAGPCVWCFVLINGP*VVPSSN Trigger: ATTTGAGGAAGGAACGACTCAAGGGCCGTTAATTAA...AACAAAGCACCACACACAGGGACCTGCAAGATAGCTTGGTGGGTAAAGGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS-3UTR TCA 90 bp | GCACTTGCTTTGGGGCCCTGCTTAAAGGCCCTCAGATGTAAAACACAGATGAACAAAAGGACATTCCACTaGAGAGATGAGCCCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: ALALGPCLKALRCKTQMNKRTFH*RDEPFI Trigger: AATGAAGGGCTCATCTCTTCAGTGGAATGTCCTTTT...GTTCATCTGTGTTTTACATCTGAGGGCCTTTAAGCAGGGCCCCAAAGCAAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS-3UTR GCA 90 bp | TATCATTCCTGTAGATGTCTCACAGAACATCCACAGAGTATGCCAGTGGGCTCTAAACTTGATGACTGGTaGCAGAGGTCCAAAGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YHSCRCLTEHPQSMPVGSKLDDW*QRSKGL Trigger: GAGACCTTTGGACCTCTGGCACCAGTCATCAAGTTT...AGAGCCCACTGGCATACTCTGTGGATGTTCTGTGAGACATCTACAGGAATGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS-3UTR CCA 90 bp | TCTTGCCACTTGGGTGGGGTCCCTAGGATGAAGACTTCTACTTTATTCTTATGCGTTACAAAGGAATCGTaGATACCCCGCTGTACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCHLGGVPRMKTSTLFLCVTKES*IPRCTK Trigger: CTTGGTACAGCGGGGTATCCACGATTCCTTTGTAAC...GCATAAGAATAAAGTAGAAGTCTTCATCCTAGGGACCCCACCCAAGTGGCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR CAA 72 bp | GTTTTGAATTTATGGGAGTGCATGCCTCTGGTGCATTaGTGGAGGTCAGAGGTCAACACTGTCACGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLNLWECMPLVH*WRSEVNTVTLV Trigger: AACCAACGTGACAGTGTTGACCTCTGACCTCCACAAATGCACCAGAGGCATGCACTCCCATAAATTCAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR CAA 72 bp | GAGCAAAGATACCGAAAGAAGAACCAAGCACTTGCTTaGGGGCCCTGCTTAAAGGCCCTCAGATGTAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: EQRYRKKNQALA*GPCLKALRCKT Trigger: TGTTTTACATCTGAGGGCCTTTAAGCAGGGCCCCAAAGCAAGTGCTTGGTTCTTCTTTCGGTATCTTTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS-3UTR GCA 90 bp | CACCAAGCTATCTTGCAGGTCCCTGTGTGTGGTGCTTTGTTTTTGAATCACGAAGAGCAAACGCAAGTCTaGCCAGCATTCCTAAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: HQAILQVPVCGALFLNHEEQTQV*PAFLNL Trigger: TAAATTTAGGAATGCTGGGCAGACTTGCGTTTGCTC...TTCGTGATTCAAAAACAAAGCACCACACACAGGGACCTGCAAGATAGCTTGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS-3UTR GCA 90 bp | TATCATTCCTGTAGATGTCTCACAGAACATCCACAGAGTATGCCAGTGGGCTCTACTGCGTCATTCACCTaGTTCTCTACCTTTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: YHSCRCLTEHPQSMPVGSTASFT*FSTFST Trigger: TGTAGAAAAGGTAGAGAAGCAGGTGAATGACGCAGT...AGAGCCCACTGGCATACTCTGTGGATGTTCTGTGAGACATCTACAGGAATGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS-3UTR CCA 90 bp | GTATGTGTGTGTGTGTGTATGTGTTTTGAATTTATGGGAGTGCATGCCTCTGGTGCAGGCTTTTCTTCATaGCTTCCGCAAATTTCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCMCFEFMGVHASGAGFSS*LPQISL Trigger: TAACGAAATTTGCGGAAGCCATGAAGAAAAGCCTGC...ACCAGAGGCATGCACTCCCATAAATTCAAAACACATACACACACACACACATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| 3UTR CAA 72 bp | CCATGTCTACAAGGACCTAGATTTTCCTTACTTAAATaGTTTCAAAGGGAGATCAACACCAGTTTCGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PCLQGPRFSLLK*FQREINTSFGE Trigger: CTCCCCGAAACTGGTGTTGATCTCCCTTTGAAACAATTTAAGTAAGGAAAATCTAGGTCCTTGTAGACATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| 3UTR CAA 72 bp | AATCGACTCTTAGCTGATTTGGTGACAACATGCTTATaGTTACAGATATCTGGGAAGCTAAGGATCATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: NRLLADLVTTCL*LQISGKLRIIR Trigger: TCGGATGATCCTTAGCTTCCCAGATATCTGTAACAATAAGCATGTTGTCACCAAATCAGCTAAGAGTCGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS CCA 90 bp | CGGTGCCCAGCTTGGCGCCGCTGGCCGGGTCGTACACCGGGAAGGTaGCGGGGGCTGGGAGCCAGCGGCCGCCCACGAAGCTGTCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RCPAWRRWPGRTPGR*RGLGASGRPRSCPR Trigger: GCGGGGACAGCTTCGTGGGCGGCCGCTGGCTCCCAGCCCCCGCCACCTTCCCGGTGTACGACCCGGCCAGCGGCGCCAAGCTGGGCACCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS GCA 90 bp | CGCGCACAGCAGCGCGGGCCTCGGGTACCCCGCAGTCGGCCACGGTaGCCAGCTTGGCGCCGCTGGCCGGGTCGTACACCGGGAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RAQQRGPRVPRSRPR*PAWRRWPGRTPGRW Trigger: CCACCTTCCCGGTGTACGACCCGGCCAGCGGCGCCAAGCTGGGCACCGTGGCCGACTGCGGGGTACCCGAGGCCCGCGCTGCTGTGCGCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS CCA 90 bp | CCTCGGGTACCCCGCAGTCGGCCACGGTGCCCAGCTTGGCGCCGCTaGCCGGGTCGTACACCGGGAAGGTGGCGGGGGCTGGGAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRVPRSRPRCPAWRR*PGRTPGRWRGLGAS Trigger: GCTGGCTCCCAGCCCCCGCCACCTTCCCGGTGTACGACCCGGCCAGCGGCGCCAAGCTGGGCACCGTGGCCGACTGCGGGGTACCCGAGG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS TCA 90 bp | TTGCCCCCGCGACGGCCTGGTCTACGTTGGCACTGTCAAAGACAATaGATGGGGCGAGGCCACCCAACTCCATGGAGACACGCTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LPPRRPGLRWHCQRQ*MGRGHPTPWRHASQ Trigger: CTGTGAAGCGTGTCTCCATGGAGTTGGGTGGCCTCGCCCCATTCATTGTCTTTGACAGTGCCAACGTAGACCAGGCCGTCGCGGGGGCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS GCA 90 bp | GCAGGGAATGACGTTGTAGACACCTGCAGGGATTCCCGCCTGGTTTaGAAGCTGAGCCAGGGCCAGGGCGGAATAGGGTGTGTCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGNDVVDTCRDSRLV*KLSQGQGGIGCVFS Trigger: GCTGAAGACACACCCTATTCCGCCCTGGCCCTGGCTCAGCTTGCAAACCAGGCGGGAATCCCTGCAGGTGTCTACAACGTCATTCCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS-3UTR CAA 90 bp | TGTCCTGAGGCAGTGGGGTTGTGCTGGGGTCTCAGGACTGGCTGGGACCCACAGACGGCCTGGTCTACGTaGGCACTGTCAAAGACAATG | + |
|
Preference number: 5 (lower is better) Translates to: CPEAVGLCWGLRTGWDPQTAWST*ALSKTM Trigger: CATTGTCTTTGACAGTGCCAACGTAGACCAGGCCGT...CTGTGGGTCCCAGCCAGTCCTGAGACCCCAGCACAACCCCACTGCCTCAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS GCA 90 bp | ATAGGGTGTGTCTTCAGCAGGTTTCACCACCACAGTGCAGCCAGCTaGCAAGGCGGCCCCCACTTTCCGGGTGATCATCGCACTGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: IGCVFSRFHHHSAAS*QGGPHFPGDHRTGK Trigger: TTTCCCAGTGCGATGATCACCCGGAAAGTGGGGGCCGCCTTGGCAGCTGGCTGCACTGTGGTGGTGAAACCTGCTGAAGACACACCCTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS TCA 90 bp | GGCCGGACTGTTTCACCCCACCAAAAGGACATTCCACTGAAGAGATaGGCCCTTCATTCACACCGACCATGCCGACCTCCAGCTGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GRTVSPHQKDIPLKR*ALHSHRPCRPPAAP Trigger: CGGAGCAGCTGGAGGTCGGCATGGTCGGTGTGAATGAAGGGCTCATCTCTTCAGTGGAATGTCCTTTTGGTGGGGTGAAACAGTCCGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS TCA 90 bp | GCGCCCAAGGCCGGACTGTTTCACCCCACCAAAAGGACATTCCACTaGAGAGATGAGCCCTTCATTCACACCGACCATGCCGACCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: APKAGLFHPTKRTFH*RDEPFIHTDHADLQ Trigger: CTGGAGGTCGGCATGGTCGGTGTGAATGAAGGGCTCATCTCTTCAGTGGAATGTCCTTTTGGTGGGGTGAAACAGTCCGGCCTTGGGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CCA 90 bp | CCCCGCGACGGCCTGGTCTACGTTGGCACTGTCAAAGACAATGAATaGGGCGAGGCCACCCAACTCCATGGAGACACGCTTCACAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: PRDGLVYVGTVKDNE*GEATQLHGDTLHRI Trigger: AATTCTGTGAAGCGTGTCTCCATGGAGTTGGGTGGCCTCGCCCCATTCATTGTCTTTGACAGTGCCAACGTAGACCAGGCCGTCGCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS GCA 90 bp | CGCCACTCTCCAGATCTGGGCCGGGTCTTGAGAGTAAAAGTAACCTaGCAATCCAACCTCAGCTGCATTTGCGATGGCGACGGCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RHSPDLGRVLRVKVT*QSNLSCICDGDGLF Trigger: GAAGAGGCCGTCGCCATCGCAAATGCAGCTGAGGTTGGATTGGCAGGTTACTTTTACTCTCAAGACCCGGCCCAGATCTGGAGAGTGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS CCA 90 bp | TGCCCAGCATTCCTAAATTTAGACGCCATTGCCCCCGCGACGGCCTaGTCTACGTTGGCACTGTCAAAGACAATGAATGGGGCGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CPAFLNLDAIAPATA*STLALSKTMNGARP Trigger: TGGCCTCGCCCCATTCATTGTCTTTGACAGTGCCAACGTAGACCAGGCCGTCGCGGGGGCAATGGCGTCTAAATTTAGGAATGCTGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS-3UTR CAA 90 bp | TGCAATGCCCTTTTCTGGCCTCTTGAGGGAACCAGCACACATGTGGTGCACAGATCGTCAATGCCATACTaGGACCCCTCGCGCCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CNALFWPLEGTSTHVVHRSSMPY*DPSRPR Trigger: CCTTGGGCGCGAGGGGTCCAAGTATGGCATTGACGA...TCTGTGCACCACATGTGTGCTGGTTCCCTCAAGAGGCCAGAAAAGGGCATTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CCA 90 bp | GTGACATTGCTGAGCAGGGTGGGCTCAAAGAAATTTCCTCCACTTTaGTGTCGCTTTCCGCCCGTCACAACCGTGGCCCCTTTGGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: VTLLSRVGSKKFPPL*CRFPPVTTVAPLAT Trigger: AGTTGCCAAAGGGGCCACGGTTGTGACGGGCGGAAAGCGACACCAAAGTGGAGGAAATTTCTTTGAGCCCACCCTGCTCAGCAATGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS GCA 90 bp | TGCGATGGCGACGGCCTCTTCCTCCTTATCAAACTTGATGACTGGTaGCAGAGGTCCAAAGGTCTCCTCAGTGATGCAGAGCATGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CDGDGLFLLIKLDDW*QRSKGLLSDAEHVP Trigger: AGGGACATGCTCTGCATCACTGAGGAGACCTTTGGACCTCTGGCACCAGTCATCAAGTTTGATAAGGAGGAAGAGGCCGTCGCCATCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CCA 90 bp | CTCCACTTTGGTGTCGCTTTCCGCCCGTCACAACCGTGGCCCCTTTaGCAACTGCGTCATTCACCTGCTTCTCTACCTTTTCTACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LHFGVAFRPSQPWPL*QLRHSPASLPFLQL Trigger: AAGCTGTAGAAAAGGTAGAGAAGCAGGTGAATGACGCAGTTGCCAAAGGGGCCACGGTTGTGACGGGCGGAAAGCGACACCAAAGTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS-3UTR CAA 90 bp | TCTTGCCACTTGGGTGGGGTCCCTAGGATGAAGACTTCTACTTTATTCTTATGCGGATTCCCGCCTGGTTaGCAAGCTGAGCCAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SCHLGGVPRMKTSTLFLCGFPPG*QAEPGP Trigger: TGGCCCTGGCTCAGCTTGCAAACCAGGCGGGAATCC...GCATAAGAATAAAGTAGAAGTCTTCATCCTAGGGACCCCACCCAAGTGGCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS GCA 90 bp | CCGCCCGTCACAACCGTGGCCCCTTTGGCAACTGCGTCATTCACCTaGTTCTCTACCTTTTCTACAGCTTTCTCATTAATTAACGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPVTTVAPLATASFT*FSTFSTAFSLINGP Trigger: AGGGCCGTTAATTAATGAGAAAGCTGTAGAAAAGGTAGAGAAGCAGGTGAATGACGCAGTTGCCAAAGGGGCCACGGTTGTGACGGGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS GCA 90 bp | TTGGTGTCGCTTTCCGCCCGTCACAACCGTGGCCCCTTTGGCAACTaGGTCATTCACCTGCTTCTCTACCTTTTCTACAGCTTTCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LVSLSARHNRGPFGN*VIHLLLYLFYSFLI Trigger: AATGAGAAAGCTGTAGAAAAGGTAGAGAAGCAGGTGAATGACGCAGTTGCCAAAGGGGCCACGGTTGTGACGGGCGGAAAGCGACACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CCA 90 bp | AGAAATTTCCTCCACTTTGGTGTCGCTTTCCGCCCGTCACAACCGTaGCCCCTTTGGCAACTGCGTCATTCACCTGCTTCTCTACCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RNFLHFGVAFRPSQP*PLWQLRHSPASLPF Trigger: AAAAGGTAGAGAAGCAGGTGAATGACGCAGTTGCCAAAGGGGCCACGGTTGTGACGGGCGGAAAGCGACACCAAAGTGGAGGAAATTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS TCA 90 bp | AGGCCACCCAACTCCATGGAGACACGCTTCACAGAATTTGCTGCGTaGTGTAGCAGGATCTTTCCCGTTGCTGTTGAGCCAGTAAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RPPNSMETRFTEFAA*CSRIFPVAVEPVKE Trigger: TTCCTTTACTGGCTCAACAGCAACGGGAAAGATCCTGCTACATCACGCAGCAAATTCTGTGAAGCGTGTCTCCATGGAGTTGGGTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS GCA 90 bp | GGCCGGGTCTTGAGAGTAAAAGTAACCTGCCAATCCAACCTCAGCTaGATTTGCGATGGCGACGGCCTCTTCCTCCTTATCAAACTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GRVLRVKVTCQSNLS*ICDGDGLFLLIKLD Trigger: ATCAAGTTTGATAAGGAGGAAGAGGCCGTCGCCATCGCAAATGCAGCTGAGGTTGGATTGGCAGGTTACTTTTACTCTCAAGACCCGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS GCA 90 bp | GTCTTGAGAGTAAAAGTAACCTGCCAATCCAACCTCAGCTGCATTTaGGATGGCGACGGCCTCTTCCTCCTTATCAAACTTGATGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLRVKVTCQSNLSCI*DGDGLFLLIKLDDW Trigger: CCAGTCATCAAGTTTGATAAGGAGGAAGAGGCCGTCGCCATCGCAAATGCAGCTGAGGTTGGATTGGCAGGTTACTTTTACTCTCAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS-3UTR CAA 90 bp | TCTTGCCACTTGGGTGGGGTCCCTAGGATGAAGACTTCTACTTTATTCTTATGCGAAATTTCCTCCACTTaGGTGTCGCTTTCCGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SCHLGGVPRMKTSTLFLCEISST*VSLSAR Trigger: ACGGGCGGAAAGCGACACCAAAGTGGAGGAAATTTC...GCATAAGAATAAAGTAGAAGTCTTCATCCTAGGGACCCCACCCAAGTGGCAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CCA 90 bp | TCGTTCCTTCCTCAAATCCGTTACCTACACGCAGGCTTTTCTTCATaGCTTCCGCAAATTTCGTTACAAAGGAATCGTGGATACCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SFLPQIRYLHAGFSS*LPQISLQRNRGYPA Trigger: AGCGGGGTATCCACGATTCCTTTGTAACGAAATTTGCGGAAGCCATGAAGAAAAGCCTGCGTGTAGGTAACGGATTTGAGGAAGGAACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS-3UTR CAA 90 bp | ATGTGTGGGCCAGTGATCTACCCAGTAAATCAAACATGCACACACAAAAAGTACAGTAAGCTCCTCTCCTaGACCGAGACCCCTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: MCGPVIYPVNQTCTHKKYSKLLS*TETPFQ Trigger: CTGGAAAGGGGTCTCGGTCAAGGAGAGGAGCTTACT...GTACTTTTTGTGTGTGCATGTTTGATTTACTGGGTAGATCACTGGCCCACACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS-3UTR CAA 90 bp | CACCAAGCTATCTTGCAGGTCCCTGTGTGTGGTGCTTTGTTTTTGAATCACGAACACGCTTCACAGAATTaGCTGCGTGATGTAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HQAILQVPVCGALFLNHEHASQN*LRDVAG Trigger: TCCTGCTACATCACGCAGCAAATTCTGTGAAGCGTG...TTCGTGATTCAAAAACAAAGCACCACACACAGGGACCTGCAAGATAGCTTGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS-3UTR CAA 90 bp | GTATGTGTGTGTGTGTGTATGTGTTTTGAATTTATGGGAGTGCATGCCTCTGGTCCCACTTCCTTGGCCTaGTTTCTAGAGCAGGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCMCFEFMGVHASGPTSLA*FLEQGM Trigger: CATTCCCTGCTCTAGAAACAAGGCCAAGGAAGTGGG...ACCAGAGGCATGCACTCCCATAAATTCAAAACACATACACACACACACACATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS-3UTR CAA 90 bp | ATGTGTGGGCCAGTGATCTACCCAGTAAATCAAACATGCACACACAAAAAGTACACCTCTCCCACTTCCTaGGCCTTGTTTCTAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MCGPVIYPVNQTCTHKKYTSPTS*ALFLEQ Trigger: CTGCTCTAGAAACAAGGCCAAGGAAGTGGGAGAGGT...GTACTTTTTGTGTGTGCATGTTTGATTTACTGGGTAGATCACTGGCCCACACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CCA 90 bp | AGGCTTTTCTTCATGGCTTCCGCAAATTTCGTTACAAAGGAATCGTaGATACCCCGCTGTACCAAGAATCTGTTTGAGCAAACGCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RLFFMASANFVTKES*IPRCTKNLFEQTQV Trigger: GACTTGCGTTTGCTCAAACAGATTCTTGGTACAGCGGGGTATCCACGATTCCTTTGTAACGAAATTTGCGGAAGCCATGAAGAAAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS TCA 90 bp | TGCTTCTCTACCTTTTCTACAGCTTTCTCATTAATTAACGGCCCTTaGGTCGTTCCTTCCTCAAATCCGTTACCTACACGCAGGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CFSTFSTAFSLINGP*VVPSSNPLPTRRLF Trigger: GAAAAGCCTGCGTGTAGGTAACGGATTTGAGGAAGGAACGACTCAAGGGCCGTTAATTAATGAGAAAGCTGTAGAAAAGGTAGAGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS-3UTR CAA 90 bp | CACCAAGCTATCTTGCAGGTCCCTGTGTGTGGTGCTTTGTTTTTGAATCACGAACCAGTAAAGGAAATTTaGGACACCAATGGATCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: HQAILQVPVCGALFLNHEPVKEI*DTNGSV Trigger: TACCGATCCATTGGTGTCCAAAATTTCCTTTACTGG...TTCGTGATTCAAAAACAAAGCACCACACACAGGGACCTGCAAGATAGCTTGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS GCA 72 bp | CAGCGCGGGCCTCGGGTACCCCGCAGTCGGCCACGGTaGCCAGCTTGGCGCCGCTGGCCGGGTCGTACACCG | + |
|
Preference number: 6 (lower is better) Translates to: QRGPRVPRSRPR*PAWRRWPGRTP Trigger: CGGTGTACGACCCGGCCAGCGGCGCCAAGCTGGGCACCGTGGCCGACTGCGGGGTACCCGAGGCCCGCGCTG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS CCA 72 bp | CCTCGGGTACCCCGCAGTCGGCCACGGTGCCCAGCTTaGCGCCGCTGGCCGGGTCGTACACCGGGAAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRVPRSRPRCPA*RRWPGRTPGRW Trigger: CCACCTTCCCGGTGTACGACCCGGCCAGCGGCGCCAAGCTGGGCACCGTGGCCGACTGCGGGGTACCCGAGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CAA 72 bp | GCCTCGGGTACCCCGCAGTCGGCCACGGTGCCCAGCTaGGCGCCGCTGGCCGGGTCGTACACCGGGAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ASGTPQSATVPS*APLAGSYTGKV Trigger: CACCTTCCCGGTGTACGACCCGGCCAGCGGCGCCAAGCTGGGCACCGTGGCCGACTGCGGGGTACCCGAGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS GCA 72 bp | AATAGGGTGTGTCTTCAGCAGGTTTCACCACCACAGTaGAGCCAGCTGCCAAGGCGGCCCCCACTTTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: NRVCLQQVSPPQ*SQLPRRPPLSG Trigger: CCCGGAAAGTGGGGGCCGCCTTGGCAGCTGGCTGCACTGTGGTGGTGAAACCTGCTGAAGACACACCCTATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS CAA 72 bp | TTAGACGCCATTGCCCCCGCGACGGCCTGGTCTACGTaGGCACTGTCAAAGACAATGAATGGGGCGAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LDAIAPATAWST*ALSKTMNGARP Trigger: TGGCCTCGCCCCATTCATTGTCTTTGACAGTGCCAACGTAGACCAGGCCGTCGCGGGGGCAATGGCGTCTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
||
| CDS CAA 90 bp | GCCGACCTCCAGCTGCTCCGCCACTCTCCAGATCTGGGCCGGGTCTaGAGAGTAAAAGTAACCTGCCAATCCAACCTCAGCTGCATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: ADLQLLRHSPDLGRV*RVKVTCQSNLSCIC Trigger: GCAAATGCAGCTGAGGTTGGATTGGCAGGTTACTTTTACTCTCAAGACCCGGCCCAGATCTGGAGAGTGGCGGAGCAGCTGGAGGTCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS TCA 72 bp | CGACGGCCTGGTCTACGTTGGCACTGTCAAAGACAATaGATGGGGCGAGGCCACCCAACTCCATGGAGACAC | + |
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Preference number: 6 (lower is better) Translates to: RRPGLRWHCQRQ*MGRGHPTPWRH Trigger: GTGTCTCCATGGAGTTGGGTGGCCTCGCCCCATTCATTGTCTTTGACAGTGCCAACGTAGACCAGGCCGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS GCA 72 bp | GCAAGTCTGCCCAGCATTCCTAAATTTAGACGCCATTaGCCCCGCGACGGCCTGGTCTACGTTGGCACTGTC | + |
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Preference number: 6 (lower is better) Translates to: ASLPSIPKFRRH*PRDGLVYVGTV Trigger: GACAGTGCCAACGTAGACCAGGCCGTCGCGGGGGCAATGGCGTCTAAATTTAGGAATGCTGGGCAGACTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CCA 72 bp | CTCCACTTTGGTGTCGCTTTCCGCCCGTCACAACCGTaGCCCCTTTGGCAACTGCGTCATTCACCTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LHFGVAFRPSQP*PLWQLRHSPAS Trigger: AGAAGCAGGTGAATGACGCAGTTGCCAAAGGGGCCACGGTTGTGACGGGCGGAAAGCGACACCAAAGTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CAA 90 bp | TTCCTAAATTTAGACGCCATTGCCCCCGCGACGGCCTGGTCTACGTaGGCACTGTCAAAGACAATGAATGGGGCGAGGCCACCCAACTCC | + |
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Preference number: 6 (lower is better) Translates to: FLNLDAIAPATAWST*ALSKTMNGARPPNS Trigger: GGAGTTGGGTGGCCTCGCCCCATTCATTGTCTTTGACAGTGCCAACGTAGACCAGGCCGTCGCGGGGGCAATGGCGTCTAAATTTAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CAA 90 bp | GGTGACATTGCTGAGCAGGGTGGGCTCAAAGAAATTTCCTCCACTTaGGTGTCGCTTTCCGCCCGTCACAACCGTGGCCCCTTTGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: GDIAEQGGLKEISST*VSLSARHNRGPFGN Trigger: GTTGCCAAAGGGGCCACGGTTGTGACGGGCGGAAAGCGACACCAAAGTGGAGGAAATTTCTTTGAGCCCACCCTGCTCAGCAATGTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CCA 72 bp | GGCCTGGTCTACGTTGGCACTGTCAAAGACAATGAATaGGGCGAGGCCACCCAACTCCATGGAGACACGCTT | + |
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Preference number: 6 (lower is better) Translates to: GLVYVGTVKDNE*GEATQLHGDTL Trigger: AAGCGTGTCTCCATGGAGTTGGGTGGCCTCGCCCCATTCATTGTCTTTGACAGTGCCAACGTAGACCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CCA 72 bp | GGTGTCGCTTTCCGCCCGTCACAACCGTGGCCCCTTTaGCAACTGCGTCATTCACCTGCTTCTCTACCTTTT | + |
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Preference number: 6 (lower is better) Translates to: GVAFRPSQPWPL*QLRHSPASLPF Trigger: AAAAGGTAGAGAAGCAGGTGAATGACGCAGTTGCCAAAGGGGCCACGGTTGTGACGGGCGGAAAGCGACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CAA 72 bp | TGGTGTCGCTTTCCGCCCGTCACAACCGTGGCCCCTTaGGCAACTGCGTCATTCACCTGCTTCTCTACCTTT | + |
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Preference number: 6 (lower is better) Translates to: WCRFPPVTTVAP*ATASFTCFSTF Trigger: AAAGGTAGAGAAGCAGGTGAATGACGCAGTTGCCAAAGGGGCCACGGTTGTGACGGGCGGAAAGCGACACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CAA 72 bp | CAGCTGCTCCGCCACTCTCCAGATCTGGGCCGGGTCTaGAGAGTAAAAGTAACCTGCCAATCCAACCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: QLLRHSPDLGRV*RVKVTCQSNLS Trigger: GCTGAGGTTGGATTGGCAGGTTACTTTTACTCTCAAGACCCGGCCCAGATCTGGAGAGTGGCGGAGCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CAA 90 bp | CCTCCACTTTGGTGTCGCTTTCCGCCCGTCACAACCGTGGCCCCTTaGGCAACTGCGTCATTCACCTGCTTCTCTACCTTTTCTACAGCT | + |
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Preference number: 6 (lower is better) Translates to: PPLWCRFPPVTTVAP*ATASFTCFSTFSTA Trigger: AGCTGTAGAAAAGGTAGAGAAGCAGGTGAATGACGCAGTTGCCAAAGGGGCCACGGTTGTGACGGGCGGAAAGCGACACCAAAGTGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS GCA 72 bp | CTTTCCGCCCGTCACAACCGTGGCCCCTTTGGCAACTaGGTCATTCACCTGCTTCTCTACCTTTTCTACAGC | + |
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Preference number: 6 (lower is better) Translates to: LSARHNRGPFGN*VIHLLLYLFYS Trigger: GCTGTAGAAAAGGTAGAGAAGCAGGTGAATGACGCAGTTGCCAAAGGGGCCACGGTTGTGACGGGCGGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CAA 72 bp | ACATACTTGACCTCTAGGTACTCGTCAATGCCATACTaGGACCCCTCGCGCCCAAGGCCGGACTGTTTCACC | + |
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Preference number: 6 (lower is better) Translates to: TYLTSRYSSMPY*DPSRPRPDCFT Trigger: GGTGAAACAGTCCGGCCTTGGGCGCGAGGGGTCCAAGTATGGCATTGACGAGTACCTAGAGGTCAAGTATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS TCA 72 bp | GCCGGACTGTTTCACCCCACCAAAAGGACATTCCACTaGAGAGATGAGCCCTTCATTCACACCGACCATGCC | + |
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Preference number: 6 (lower is better) Translates to: AGLFHPTKRTFH*RDEPFIHTDHA Trigger: GGCATGGTCGGTGTGAATGAAGGGCTCATCTCTTCAGTGGAATGTCCTTTTGGTGGGGTGAAACAGTCCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS GCA 72 bp | CCAGATCTGGGCCGGGTCTTGAGAGTAAAAGTAACCTaGCAATCCAACCTCAGCTGCATTTGCGATGGCGAC | + |
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Preference number: 6 (lower is better) Translates to: PDLGRVLRVKVT*QSNLSCICDGD Trigger: GTCGCCATCGCAAATGCAGCTGAGGTTGGATTGGCAGGTTACTTTTACTCTCAAGACCCGGCCCAGATCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CAA 90 bp | TCAGCTGCATTTGCGATGGCGACGGCCTCTTCCTCCTTATCAAACTaGATGACTGGTGCCAGAGGTCCAAAGGTCTCCTCAGTGATGCAG | + |
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Preference number: 6 (lower is better) Translates to: SAAFAMATASSSLSN*MTGARGPKVSSVMQ Trigger: CTGCATCACTGAGGAGACCTTTGGACCTCTGGCACCAGTCATCAAGTTTGATAAGGAGGAAGAGGCCGTCGCCATCGCAAATGCAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS TCA 72 bp | GTTTCACCCCACCAAAAGGACATTCCACTGAAGAGATaGGCCCTTCATTCACACCGACCATGCCGACCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VSPHQKDIPLKR*ALHSHRPCRPP Trigger: TGGAGGTCGGCATGGTCGGTGTGAATGAAGGGCTCATCTCTTCAGTGGAATGTCCTTTTGGTGGGGTGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS GCA 72 bp | GACGGCCTCTTCCTCCTTATCAAACTTGATGACTGGTaGCAGAGGTCCAAAGGTCTCCTCAGTGATGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: DGLFLLIKLDDW*QRSKGLLSDAE Trigger: CTCTGCATCACTGAGGAGACCTTTGGACCTCTGGCACCAGTCATCAAGTTTGATAAGGAGGAAGAGGCCGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CCA 72 bp | TTCCTAAATTTAGACGCCATTGCCCCCGCGACGGCCTaGTCTACGTTGGCACTGTCAAAGACAATGAATGGG | + |
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Preference number: 6 (lower is better) Translates to: FLNLDAIAPATA*STLALSKTMNG Trigger: CCCATTCATTGTCTTTGACAGTGCCAACGTAGACCAGGCCGTCGCGGGGGCAATGGCGTCTAAATTTAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CAA 72 bp | GTCTCCTCAGTGATGCAGAGCATGTCCCTGGTGACATaGCTGAGCAGGGTGGGCTCAAAGAAATTTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VSSVMQSMSLVT*LSRVGSKKFPP Trigger: TGGAGGAAATTTCTTTGAGCCCACCCTGCTCAGCAATGTCACCAGGGACATGCTCTGCATCACTGAGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CAA 72 bp | TTTGCGATGGCGACGGCCTCTTCCTCCTTATCAAACTaGATGACTGGTGCCAGAGGTCCAAAGGTCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: FAMATASSSLSN*MTGARGPKVSS Trigger: TGAGGAGACCTTTGGACCTCTGGCACCAGTCATCAAGTTTGATAAGGAGGAAGAGGCCGTCGCCATCGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CAA 90 bp | GGTCCAAAGGTCTCCTCAGTGATGCAGAGCATGTCCCTGGTGACATaGCTGAGCAGGGTGGGCTCAAAGAAATTTCCTCCACTTTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: GPKVSSVMQSMSLVT*LSRVGSKKFPPLWC Trigger: ACACCAAAGTGGAGGAAATTTCTTTGAGCCCACCCTGCTCAGCAATGTCACCAGGGACATGCTCTGCATCACTGAGGAGACCTTTGGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CAA 90 bp | TGTAGCAGGATCTTTCCCGTTGCTGTTGAGCCAGTAAAGGAAATTTaGGACACCAATGGATCGGTACACAGGACCTCTCCCACTTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: CSRIFPVAVEPVKEI*DTNGSVHRTSPTSL Trigger: CAAGGAAGTGGGAGAGGTCCTGTGTACCGATCCATTGGTGTCCAAAATTTCCTTTACTGGCTCAACAGCAACGGGAAAGATCCTGCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CAA 72 bp | ATCTTTCCCGTTGCTGTTGAGCCAGTAAAGGAAATTTaGGACACCAATGGATCGGTACACAGGACCTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: IFPVAVEPVKEI*DTNGSVHRTSP Trigger: GGGAGAGGTCCTGTGTACCGATCCATTGGTGTCCAAAATTTCCTTTACTGGCTCAACAGCAACGGGAAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CAA 90 bp | CCCTGGGCCTCTTTCAGTGGCTTTCCACTCTCGGCTGTTATGATCTaGGCAAGGTCGTCCTTATTTTGTATCATTAAGTCGTACCATTTA | + |
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Preference number: 6 (lower is better) Translates to: PWASFSGFPLSAVMI*ARSSLFCIIKSYHL Trigger: TAAATGGTACGACTTAATGATACAAAATAAGGACGACCTTGCCAAGATCATAACAGCCGAGAGTGGAAAGCCACTGAAAGAGGCCCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS TCA 72 bp | GGGCCTCTTTCAGTGGCTTTCCACTCTCGGCTGTTATaGTCTTGGCAAGGTCGTCCTTATTTTGTATCATTA | + |
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Preference number: 6 (lower is better) Translates to: GPLSVAFHSRLL*SWQGRPYFVSL Trigger: TAATGATACAAAATAAGGACGACCTTGCCAAGATCATAACAGCCGAGAGTGGAAAGCCACTGAAAGAGGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CCA 72 bp | CCTCAAATCCGTTACCTACACGCAGGCTTTTCTTCATaGCTTCCGCAAATTTCGTTACAAAGGAATCGTGGA | + |
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Preference number: 6 (lower is better) Translates to: PQIRYLHAGFSS*LPQISLQRNRG Trigger: TCCACGATTCCTTTGTAACGAAATTTGCGGAAGCCATGAAGAAAAGCCTGCGTGTAGGTAACGGATTTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS TCA 72 bp | ACCTTTTCTACAGCTTTCTCATTAATTAACGGCCCTTaGGTCGTTCCTTCCTCAAATCCGTTACCTACACGC | + |
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Preference number: 6 (lower is better) Translates to: TFSTAFSLINGP*VVPSSNPLPTR Trigger: GCGTGTAGGTAACGGATTTGAGGAAGGAACGACTCAAGGGCCGTTAATTAATGAGAAAGCTGTAGAAAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CCA 72 bp | TTCATGGCTTCCGCAAATTTCGTTACAAAGGAATCGTaGATACCCCGCTGTACCAAGAATCTGTTTGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: FMASANFVTKES*IPRCTKNLFEQ Trigger: TTGCTCAAACAGATTCTTGGTACAGCGGGGTATCCACGATTCCTTTGTAACGAAATTTGCGGAAGCCATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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| CDS CAA 72 bp | TCTTTCAGTGGCTTTCCACTCTCGGCTGTTATGATCTaGGCAAGGTCGTCCTTATTTTGTATCATTAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: SFSGFPLSAVMI*ARSSLFCIIKS Trigger: CGACTTAATGATACAAAATAAGGACGACCTTGCCAAGATCATAACAGCCGAGAGTGGAAAGCCACTGAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037615.7 |
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