Pregenerated sensors for ALDH4A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028737Ensembl transcript IDs: ENSMUST00000039818.10
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGACTGGGCTGATCCTCCCCAATATGACCCGAAGCCTGGGCACCTaGCTCCGAGGACAGGCACCCAGTGGCCAGGACAGGGTCCAGCTC | + |
|
Preference number: 1 (lower is better) Translates to: WTGLILPNMTRSLGT*LRGQAPSGQDRVQL Trigger: GAGCTGGACCCTGTCCTGGCCACTGGGTGCCTGTCCTCGGAGTCAGGTGCCCAGGCTTCGGGTCATATTGGGGAGGATCAGCCCAGTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR TCA 90 bp | AGACAGGCGGGGAACCTGCCAGGTACCAGGGCGTTCCGCAGCGAATaGGAATTCTGGGTGGACTGGGCTGATCCTCCCCAATATGACCCG | + |
|
Preference number: 1 (lower is better) Translates to: RQAGNLPGTRAFRSE*EFWVDWADPPQYDP Trigger: CGGGTCATATTGGGGAGGATCAGCCCAGTCCACCCAGAATTCTCATTCGCTGCGGAACGCCCTGGTACCTGGCAGGTTCCCCGCCTGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR TCA 90 bp | TGGGATGACCACCACTGGTCACTCCCAGCAGGTGTCCAGGAGGGATaGAGGCTCAGGGATGCACAAGCACCCTGGAGGAAGGCACATGGG | + |
|
Preference number: 1 (lower is better) Translates to: WDDHHWSLPAGVQEG*RLRDAQAPWRKAHG Trigger: CCCATGTGCCTTCCTCCAGGGTGCTTGTGCATCCCTGAGCCTTCATCCCTCCTGGACACCTGCTGGGAGTGACCAGTGGTGGTCATCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR TCA 90 bp | AATGGAGGCCCGCCTCGAGGTTTCCCAGACTCAGCCTGTATGGGATaGCCACCACTGGTCACTCCCAGCAGGTGTCCAGGAGGGATGAAG | + |
|
Preference number: 1 (lower is better) Translates to: NGGPPRGFPDSACMG*PPLVTPSRCPGGMK Trigger: CTTCATCCCTCCTGGACACCTGCTGGGAGTGACCAGTGGTGGTCATCCCATACAGGCTGAGTCTGGGAAACCTCGAGGCGGGCCTCCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR CCA 90 bp | TATGGAATGGAGGCCCGCCTCGAGGTTTCCCAGACTCAGCCTGTATaGGATGACCACCACTGGTCACTCCCAGCAGGTGTCCAGGAGGGA | + |
|
Preference number: 1 (lower is better) Translates to: YGMEARLEVSQTQPV*DDHHWSLPAGVQEG Trigger: TCCCTCCTGGACACCTGCTGGGAGTGACCAGTGGTGGTCATCCCATACAGGCTGAGTCTGGGAAACCTCGAGGCGGGCCTCCATTCCATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR CCA 90 bp | GGCCAGGACAGGGTCCAGCTCAGCTGTAGAGAGTCCAGAAGAAGCTaGTGGGGAGCAGGGGGTCAGTGCAGAGATGTCAGTCATCTGGAT | + |
|
Preference number: 1 (lower is better) Translates to: GQDRVQLSCRESRRS*WGAGGQCRDVSHLD Trigger: ATCCAGATGACTGACATCTCTGCACTGACCCCCTGCTCCCCACCAGCTTCTTCTGGACTCTCTACAGCTGAGCTGGACCCTGTCCTGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR TCA 90 bp | GACATTTGTAGCCGAGTCCTGCTCCCTGGGAAGCAACATGGACCCTaGAAGGAAGCAGAAGGCAGAGCTGGCCCTGGTACTGGTACCCCA | + |
|
Preference number: 1 (lower is better) Translates to: DICSRVLLPGKQHGP*KEAEGRAGPGTGTP Trigger: TGGGGTACCAGTACCAGGGCCAGCTCTGCCTTCTGCTTCCTTTCAGGGTCCATGTTGCTTCCCAGGGAGCAGGACTCGGCTACAAATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR CCA 90 bp | CAGGACAGGGTCCAGCTCAGCTGTAGAGAGTCCAGAAGAAGCTGGTaGGGAGCAGGGGGTCAGTGCAGAGATGTCAGTCATCTGGATGGA | + |
|
Preference number: 1 (lower is better) Translates to: QDRVQLSCRESRRSW*GAGGQCRDVSHLDG Trigger: TCCATCCAGATGACTGACATCTCTGCACTGACCCCCTGCTCCCCACCAGCTTCTTCTGGACTCTCTACAGCTGAGCTGGACCCTGTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR TCA 90 bp | AGCTGGCCCTGGTACTGGTACCCCACCCTTCAGCGTAGCCCTTGGTaGCAGCTATACCAGTTCCATGTGGACCCCAGGCAAATGTCCTTA | + |
|
Preference number: 1 (lower is better) Translates to: SWPWYWYPTLQRSPW*QLYQFHVDPRQMSL Trigger: TAAGGACATTTGCCTGGGGTCCACATGGAACTGGTATAGCTGTCACCAAGGGCTACGCTGAAGGGTGGGGTACCAGTACCAGGGCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR TCA 90 bp | CCACAGTGGCTGACCAGGTCTCTGGGAACCATGGCCAGGCAAAGGTaGCACATAAGATCAGCCACCACAGCACATACTGGTAGGAGAACA | + |
|
Preference number: 1 (lower is better) Translates to: PQWLTRSLGTMARQR*HIRSATTAHTGRRT Trigger: TGTTCTCCTACCAGTATGTGCTGTGGTGGCTGATCTTATGTGTCACCTTTGCCTGGCCATGGTTCCCAGAGACCTGGTCAGCCACTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR GCA 90 bp | CTCACAGTGTACAACTGCACAACTGGGACATTTGTAGCCGAGTCCTaGTCCCTGGGAAGCAACATGGACCCTGAAAGGAAGCAGAAGGCA | + |
|
Preference number: 1 (lower is better) Translates to: LTVYNCTTGTFVAES*SLGSNMDPERKQKA Trigger: TGCCTTCTGCTTCCTTTCAGGGTCCATGTTGCTTCCCAGGGAGCAGGACTCGGCTACAAATGTCCCAGTTGTGCAGTTGTACACTGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR TCA 90 bp | ATGTCCTTAAAAAGTCATGTGTGCTTTCAAGCCACTAGAAACATTTaGTTATCCAGGACCCAAGCAGGAGCTCTCCCTGGCTACCACTGG | + |
|
Preference number: 1 (lower is better) Translates to: MSLKSHVCFQATRNI*LSRTQAGALPGYHW Trigger: CCAGTGGTAGCCAGGGAGAGCTCCTGCTTGGGTCCTGGATAATCAAATGTTTCTAGTGGCTTGAAAGCACACATGACTTTTTAAGGACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR-3UTR CCA 90 bp | GAAGCAGAAGGCAGAGCTGGCCCTGGTACTGGTACCCCACCCTTCAGCGTAGCCTCCAGAAGAAGCTGGTaGGGAGCAGGGGGTCAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: EAEGRAGPGTGTPPFSVASRRSW*GAGGQC Trigger: GCACTGACCCCCTGCTCCCCACCAGCTTCTTCTGGA...GGCTACGCTGAAGGGTGGGGTACCAGTACCAGGGCCAGCTCTGCCTTCTGCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR-3UTR TCA 90 bp | ACTCAGCCTGTATGGGATGACCACCACTGGTCACTCCCAGCAGGTGTCCAGGAGGGTTCTGAGGCCCTCTaGGTCACCAGGCCCAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: TQPVWDDHHWSLPAGVQEGSEAL*VTRPRM Trigger: CATCCTGGGCCTGGTGACTCAGAGGGCCTCAGAACC...CTCCTGGACACCTGCTGGGAGTGACCAGTGGTGGTCATCCCATACAGGCTGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR-3UTR TCA 90 bp | AAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGTTACTCCTCCCTCCCACGACGAAGCCTGGGCACCTaGCTCCGAGGACAGGCACCC | + |
|
Preference number: 2 (lower is better) Translates to: KPFLNLAIGLRSYSSLPRRSLGT*LRGQAP Trigger: GGGTGCCTGTCCTCGGAGTCAGGTGCCCAGGCTTCG...TCGTGGGAGGGAGGAGTAACTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR-3UTR GCA 90 bp | GAAGCAGAAGGCAGAGCTGGCCCTGGTACTGGTACCCCACCCTTCAGCGTAGCCGGAGCAGGGGGTCAGTaGAGAGATGTCAGTCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: EAEGRAGPGTGTPPFSVAGAGGQ*RDVSHL Trigger: CAGATGACTGACATCTCTGCACTGACCCCCTGCTCC...GGCTACGCTGAAGGGTGGGGTACCAGTACCAGGGCCAGCTCTGCCTTCTGCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR-3UTR CCA 90 bp | GGGGTGGGGGTGGGACAGAAAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGAGGCAGAGCTGGCCCTaGTACTGGTACCCCACCCTT | + |
|
Preference number: 2 (lower is better) Translates to: GVGVGQKAISKPSHWAPERQSWP*YWYPTL Trigger: AAGGGTGGGGTACCAGTACCAGGGCCAGCTCTGCCT...CTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTTTCTGTCCCACCCCCACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR-3UTR GCA 90 bp | AAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGTTACTCCTCCCTCCCACGAGACAGGCGGGGAACCTaGCAGGTACCAGGGCGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: KPFLNLAIGLRSYSSLPRDRRGT*QVPGRS Trigger: GGAACGCCCTGGTACCTGGCAGGTTCCCCGCCTGTC...TCGTGGGAGGGAGGAGTAACTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR-3UTR CCA 90 bp | GAAGCAGAAGGCAGAGCTGGCCCTGGTACTGGTACCCCACCCTTCAGCGTAGCCAATGAGAATTCTGGGTaGACTGGGCTGATCCTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: EAEGRAGPGTGTPPFSVANENSG*TGLILP Trigger: GGGGAGGATCAGCCCAGTCCACCCAGAATTCTCATT...GGCTACGCTGAAGGGTGGGGTACCAGTACCAGGGCCAGCTCTGCCTTCTGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR-3UTR CCA 90 bp | GACAGAAAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGTTACTCCTCCCTCAGGACAGGCACCCAGTaGCCAGGACAGGGTCCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: DRKPFLNLAIGLRSYSSLRTGTQ*PGQGPA Trigger: AGCTGGACCCTGTCCTGGCCACTGGGTGCCTGTCCT...GAGGGAGGAGTAACTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTTTCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR-3UTR TCA 90 bp | ATCATAAAAACTTCCACAGTGGCTGACCAGGTCTCTGGGAACCATGGCCAGGCAGGAGTCTCTGAGTGGTaGGGTGAGACACCAGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: IIKTSTVADQVSGNHGQAGVSEW*GETPEL Trigger: CAGCTCTGGTGTCTCACCTCACCACTCAGAGACTCC...TGCCTGGCCATGGTTCCCAGAGACCTGGTCAGCCACTGTGGAAGTTTTTATGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR-3UTR GCA 90 bp | GACAGAAAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGTTACTCCTCCCTCAATGAGAAGCCAGTCTaGCCCTCCCCTCCCTCCATG | + |
|
Preference number: 2 (lower is better) Translates to: DRKPFLNLAIGLRSYSSLNEKPV*PSPPSM Trigger: CATGGAGGGAGGGGAGGGGCAGACTGGCTTCTCATT...GAGGGAGGAGTAACTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTTTCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR-3UTR TCA 90 bp | GGGGTGGGGGTGGGACAGAAAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGGCCACTAGAAACATTTaGTTATCCAGGACCCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GVGVGQKAISKPSHWAPEATRNI*LSRTQA Trigger: TGCTTGGGTCCTGGATAATCAAATGTTTCTAGTGGC...CTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTTTCTGTCCCACCCCCACCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR-3UTR TCA 90 bp | GTGACAGCTATACCAGTTCCATGTGGACCCCAGGCAAATGTCCTTAAAAAGTCAGGTGTCCAGGAGGGATaGAGGCTCAGGGATGCACAA | + |
|
Preference number: 2 (lower is better) Translates to: VTAIPVPCGPQANVLKKSGVQEG*RLRDAQ Trigger: TTGTGCATCCCTGAGCCTTCATCCCTCCTGGACACC...TGACTTTTTAAGGACATTTGCCTGGGGTCCACATGGAACTGGTATAGCTGTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR-3UTR CCA 90 bp | GACAGAAAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGTTACTCCTCCCTCTATACCAGTTCCATGTaGACCCCAGGCAAATGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: DRKPFLNLAIGLRSYSSLYTSSM*TPGKCP Trigger: AGGACATTTGCCTGGGGTCCACATGGAACTGGTATA...GAGGGAGGAGTAACTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTTTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR-3UTR TCA 90 bp | GTGACAGCTATACCAGTTCCATGTGGACCCCAGGCAAATGTCCTTAAAAAGTCATATCCCTTTAGGTTCTaGGGCCCTCTGAGTCACCAG | + |
|
Preference number: 2 (lower is better) Translates to: VTAIPVPCGPQANVLKKSYPFRF*GPLSHQ Trigger: CTGGTGACTCAGAGGGCCTCAGAACCTAAAGGGATA...TGACTTTTTAAGGACATTTGCCTGGGGTCCACATGGAACTGGTATAGCTGTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR-3UTR TCA 90 bp | GACAGAAAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGTTACTCCTCCCTCCCTCCATGGCCACTTTaGGTAGATATCTGGCATTTT | + |
|
Preference number: 2 (lower is better) Translates to: DRKPFLNLAIGLRSYSSLPPWPL*VDIWHF Trigger: AAAATGCCAGATATCTACTCAAAGTGGCCATGGAGG...GAGGGAGGAGTAACTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTTTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR-3UTR CCA 90 bp | GTGACAGCTATACCAGTTCCATGTGGACCCCAGGCAAATGTCCTTAAAAAGTCAGAGATGTCAGTCATCTaGATGGACATCTGCTTGACA | + |
|
Preference number: 2 (lower is better) Translates to: VTAIPVPCGPQANVLKKSEMSVI*MDICLT Trigger: TGTCAAGCAGATGTCCATCCAGATGACTGACATCTC...TGACTTTTTAAGGACATTTGCCTGGGGTCCACATGGAACTGGTATAGCTGTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR TCA 72 bp | CTGATCCTCCCCAATATGACCCGAAGCCTGGGCACCTaGCTCCGAGGACAGGCACCCAGTGGCCAGGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: LILPNMTRSLGT*LRGQAPSGQDR Trigger: CCTGTCCTGGCCACTGGGTGCCTGTCCTCGGAGTCAGGTGCCCAGGCTTCGGGTCATATTGGGGAGGATCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR TCA 72 bp | GGGAACCTGCCAGGTACCAGGGCGTTCCGCAGCGAATaGGAATTCTGGGTGGACTGGGCTGATCCTCCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GNLPGTRAFRSE*EFWVDWADPPQ Trigger: TTGGGGAGGATCAGCCCAGTCCACCCAGAATTCTCATTCGCTGCGGAACGCCCTGGTACCTGGCAGGTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR TCA 72 bp | CCGCCTCGAGGTTTCCCAGACTCAGCCTGTATGGGATaGCCACCACTGGTCACTCCCAGCAGGTGTCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PPRGFPDSACMG*PPLVTPSRCPG Trigger: TCCTGGACACCTGCTGGGAGTGACCAGTGGTGGTCATCCCATACAGGCTGAGTCTGGGAAACCTCGAGGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR-3UTR CAA 90 bp | GATCCTCCCCAATATGACCCGAAGCCTGGGCACCTGACTCCGAGGACAGGCACCTGGATGGACATCTGCTaGACAACAGAGGTGCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: DPPQYDPKPGHLTPRTGTWMDIC*TTEVLA Trigger: GGCCAGCACCTCTGTTGTCAAGCAGATGTCCATCCA...GGTGCCTGTCCTCGGAGTCAGGTGCCCAGGCTTCGGGTCATATTGGGGAGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR CCA 72 bp | GCAACATGGACCCTGAAAGGAAGCAGAAGGCAGAGCTaGCCCTGGTACTGGTACCCCACCCTTCAGCGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: ATWTLKGSRRQS*PWYWYPTLQRS Trigger: GCTACGCTGAAGGGTGGGGTACCAGTACCAGGGCCAGCTCTGCCTTCTGCTTCCTTTCAGGGTCCATGTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR GCA 72 bp | CAGGATGAGGAGAGAAAAGCAGACAGGCGGGGAACCTaGCAGGTACCAGGGCGTTCCGCAGCGAATGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: QDEERKADRRGT*QVPGRSAANEN Trigger: ATTCTCATTCGCTGCGGAACGCCCTGGTACCTGGCAGGTTCCCCGCCTGTCTGCTTTTCTCTCCTCATCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR CCA 72 bp | GGGGAGCAGGGGGTCAGTGCAGAGATGTCAGTCATCTaGATGGACATCTGCTTGACAACAGAGGTGCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GEQGVSAEMSVI*MDICLTTEVLA Trigger: GGCCAGCACCTCTGTTGTCAAGCAGATGTCCATCCAGATGACTGACATCTCTGCACTGACCCCCTGCTCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR CCA 72 bp | GTAGCCCCACCCCCTCACAGTGTACAACTGCACAACTaGGACATTTGTAGCCGAGTCCTGCTCCCTGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VAPPPHSVQLHN*DICSRVLLPGK Trigger: CTTCCCAGGGAGCAGGACTCGGCTACAAATGTCCCAGTTGTGCAGTTGTACACTGTGAGGGGGTGGGGCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR TCA 72 bp | TGGTACTGGTACCCCACCCTTCAGCGTAGCCCTTGGTaGCAGCTATACCAGTTCCATGTGGACCCCAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: WYWYPTLQRSPW*QLYQFHVDPRQ Trigger: TTGCCTGGGGTCCACATGGAACTGGTATAGCTGTCACCAAGGGCTACGCTGAAGGGTGGGGTACCAGTACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR CCA 72 bp | CATTTGATTATCCAGGACCCAAGCAGGAGCTCTCCCTaGCTACCACTGGGCTGGCTGCATCCATCCCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: HLIIQDPSRSSP*LPLGWLHPSHK Trigger: CTTGTGGGATGGATGCAGCCAGCCCAGTGGTAGCCAGGGAGAGCTCCTGCTTGGGTCCTGGATAATCAAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR TCA 72 bp | GGACAAAGCCAGCTGATGCCCCTGCAGTCATCTGGCTaGGGTCCTATCTCACTGGACATGTGTAGGGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: GQSQLMPLQSSG*GPISLDMCRGQ Trigger: TTGTCCCCTACACATGTCCAGTGAGATAGGACCTCAGCCAGATGACTGCAGGGGCATCAGCTGGCTTTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR TCA 72 bp | GGTCCTGAGAATATCCCTTTAGGTTCTGAGGCCCTCTaGGTCACCAGGCCCAGGATGAGGAGAGAAAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GPENIPLGSEAL*VTRPRMRREKQ Trigger: CTGCTTTTCTCTCCTCATCCTGGGCCTGGTGACTCAGAGGGCCTCAGAACCTAAAGGGATATTCTCAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR TCA 72 bp | AGTGGTGAGGTGAGACACCAGAGCTGTCTCCTTCCCTaGCAGGGTCCTGAGAATATCCCTTTAGGTTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SGEVRHQSCLLP*QGPENIPLGSE Trigger: CTCAGAACCTAAAGGGATATTCTCAGGACCCTGTCAGGGAAGGAGACAGCTCTGGTGTCTCACCTCACCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| 3UTR CCA 72 bp | TCCCACGACACCACACAGAACCACGTGACAAGACTCTaGCAGTTCATTAGATTAGGAATGAGAAGCCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SHDTTQNHVTRL*QFIRLGMRSQS Trigger: AGACTGGCTTCTCATTCCTAATCTAATGAACTGCCAGAGTCTTGTCACGTGGTTCTGTGTGGTGTCGTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR TCA 90 bp | CAATATGACCCGAAGCCTGGGCACCTGACTCCGAGGACAGGCACCCAGTGGCCACCAGCAGTCGCCCTTTaGTCTGCGGCCACAGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: QYDPKPGHLTPRTGTQWPPAVAL*SAATAT Trigger: AGTCGCTGTGGCCGCAGATCAAAGGGCGACTGCTGG...TGGCCACTGGGTGCCTGTCCTCGGAGTCAGGTGCCCAGGCTTCGGGTCATATTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR TCA 90 bp | CAATATGACCCGAAGCCTGGGCACCTGACTCCGAGGACAGGCACCCAGTGGCCAGCCACAAAGGTGCTCTaGGCTGGTGACTGTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QYDPKPGHLTPRTGTQWPATKVL*AGDCVP Trigger: GGGGACACAGTCACCAGCTCAGAGCACCTTTGTGGC...TGGCCACTGGGTGCCTGTCCTCGGAGTCAGGTGCCCAGGCTTCGGGTCATATTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR GCA 90 bp | CAATATGACCCGAAGCCTGGGCACCTGACTCCGAGGACAGGCACCCAGTGGCCAAGTCGCCCTTTGATCTaGGGCCACAGCGACTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QYDPKPGHLTPRTGTQWPSRPLI*GHSDFG Trigger: GCCGAAGTCGCTGTGGCCGCAGATCAAAGGGCGACT...TGGCCACTGGGTGCCTGTCCTCGGAGTCAGGTGCCCAGGCTTCGGGTCATATTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR TCA 90 bp | GATGAGGAGAGAAAAGCAGACAGGCGGGGAACCTGCCAGGTACCAGGGCGTTCCGCCTCCACAGGTGTTTaGAGGTGGGGACACTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DEERKADRRGTCQVPGRSASTGV*RWGHCL Trigger: CAGGCAGTGTCCCCACCTTCAAACACCTGTGGAGGC...GGAACGCCCTGGTACCTGGCAGGTTCCCCGCCTGTCTGCTTTTCTCTCCTCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR TCA 90 bp | GAAGCAGAAGGCAGAGCTGGCCCTGGTACTGGTACCCCACCCTTCAGCGTAGCCTCCCCCAGGGGCTTATaGGTCTCCTTGATGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EAEGRAGPGTGTPPFSVASPRGL*VSLMTW Trigger: CCAGGTCATCAAGGAGACTCATAAGCCCCTGGGGGA...GGCTACGCTGAAGGGTGGGGTACCAGTACCAGGGCCAGCTCTGCCTTCTGCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | GATCCTCCCCAATATGACCCGAAGCCTGGGCACCTGACTCCGAGGACAGGCACCTGCCCTGTCCCACCATaGTCTTGGCAAGGACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: DPPQYDPKPGHLTPRTGTCPVPP*SWQGLP Trigger: CGGAAGTCCTTGCCAAGACCATGGTGGGACAGGGCA...GGTGCCTGTCCTCGGAGTCAGGTGCCCAGGCTTCGGGTCATATTGGGGAGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR TCA 90 bp | AAGAAGCTGGTGGGGAGCAGGGGGTCAGTGCAGAGATGTCAGTCATCTGGATGGTGCTGGGTGGCACACTaGTGGGCTGTTCCCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KKLVGSRGSVQRCQSSGWCWVAH*WAVPPP Trigger: TGGAGGGGGAACAGCCCATCAGTGTGCCACCCAGCA...CCATCCAGATGACTGACATCTCTGCACTGACCCCCTGCTCCCCACCAGCTTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR GCA 90 bp | GATCCTCCCCAATATGACCCGAAGCCTGGGCACCTGACTCCGAGGACAGGCACCTTCAGAGAGGAGGTGTaGTTCCATCGTAGCCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: DPPQYDPKPGHLTPRTGTFREEV*FHRSPA Trigger: CGCTGGGCTACGATGGAAGCACACCTCCTCTCTGAA...GGTGCCTGTCCTCGGAGTCAGGTGCCCAGGCTTCGGGTCATATTGGGGAGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGGGTGGGACAGAAAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGTCCTTCAGAGCCTTCTaGAGTGCATCCCGCTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVGVGQKAISKPSHWAPESFRAF*SASRSG Trigger: CCCCGAGCGGGATGCACTGCAGAAGGCTCTGAAGGA...CTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTTTCTGTCCCACCCCCACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR GCA 90 bp | GAAGCAGAAGGCAGAGCTGGCCCTGGTACTGGTACCCCACCCTTCAGCGTAGCCAGGTTCTGGGCCACCTaGCTCCACAGGTGTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EAEGRAGPGTGTPPFSVARFWAT*LHRCLK Trigger: CTTCAAACACCTGTGGAGGCAGGTGGCCCAGAACCT...GGCTACGCTGAAGGGTGGGGTACCAGTACCAGGGCCAGCTCTGCCTTCTGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR GCA 90 bp | AGGGATGAAGGCTCAGGGATGCACAAGCACCCTGGAGGAAGGCACATGGGACTAGTTACACTGGCCCCCTaGCAGGATGCTGAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RDEGSGMHKHPGGRHMGLVTLAP*QDAEAG Trigger: CCCAGCCTCAGCATCCTGGCAGGGGGCCAGTGTAAC...TAGTCCCATGTGCCTTCCTCCAGGGTGCTTGTGCATCCCTGAGCCTTCATCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | AACCTAGCCATTGGGCTCCGGAGTTACTCCTCCCTCCCACGACACCACACAGAACCCCGGTACACCGTGTaGTTGGTGCTGGGTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: NLAIGLRSYSSLPRHHTEPRYTV*LVLGGT Trigger: TGTGCCACCCAGCACCAACCACACGGTGTACCGGGG...TTCTGTGTGGTGTCGTGGGAGGGAGGAGTAACTCCGGAGCCCAATGGCTAGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR GCA 90 bp | GATGAGGAGAGAAAAGCAGACAGGCGGGGAACCTGCCAGGTACCAGGGCGTTCCCTTGGATCACGGTCTTaGCCTGTCCCACCATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DEERKADRRGTCQVPGRSLGSRS*PVPPWS Trigger: AGACCATGGTGGGACAGGGCAAGACCGTGATCCAAG...GGAACGCCCTGGTACCTGGCAGGTTCCCCGCCTGTCTGCTTTTCTCTCCTCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR GCA 90 bp | GATCCTCCCCAATATGACCCGAAGCCTGGGCACCTGACTCCGAGGACAGGCACCTGCAGCATCGATCTCTaGTTGGATCACGGTCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DPPQYDPKPGHLTPRTGTCSIDL*LDHGLA Trigger: GGCAAGACCGTGATCCAAGCAGAGATCGATGCTGCA...GGTGCCTGTCCTCGGAGTCAGGTGCCCAGGCTTCGGGTCATATTGGGGAGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR GCA 90 bp | GGACAGGCACCCAGTGGCCAGGACAGGGTCCAGCTCAGCTGTAGAGAGTCCAGAGTCGATGAGTTCGGCTaGAGCATCGATCTCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GQAPSGQDRVQLSCRESRVDEFG*SIDLCL Trigger: CAAGCAGAGATCGATGCTGCAGCCGAACTCATCGAC...TCTGGACTCTCTACAGCTGAGCTGGACCCTGTCCTGGCCACTGGGTGCCTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR GCA 90 bp | GAAGCAGAAGGCAGAGCTGGCCCTGGTACTGGTACCCCACCCTTCAGCGTAGCCGGTCCCAAAGTCCTCTaGAGGATCCCCCACTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EAEGRAGPGTGTPPFSVAGPKVL*RIPHFD Trigger: ATCAAAGTGGGGGATCCTGCAGAGGACTTTGGGACC...GGCTACGCTGAAGGGTGGGGTACCAGTACCAGGGCCAGCTCTGCCTTCTGCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR GCA 90 bp | AAGAAGCTGGTGGGGAGCAGGGGGTCAGTGCAGAGATGTCAGTCATCTGGATGGATCCTGGGCGAACACTaGCCCCGTGAGGCCATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KKLVGSRGSVQRCQSSGWILGEH*PREAIA Trigger: AGCTATGGCCTCACGGGGGCAGTGTTCGCCCAGGAT...CCATCCAGATGACTGACATCTCTGCACTGACCCCCTGCTCCCCACCAGCTTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | ACTCAGCCTGTATGGGATGACCACCACTGGTCACTCCCAGCAGGTGTCCAGGAGGTCCCACCATGGTCTTaGCAAGGACTTCCGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQPVWDDHHWSLPAGVQEVPPWS*QGLPPF Trigger: GAAGGGCGGAAGTCCTTGCCAAGACCATGGTGGGAC...CTCCTGGACACCTGCTGGGAGTGACCAGTGGTGGTCATCCCATACAGGCTGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | AGGGATGAAGGCTCAGGGATGCACAAGCACCCTGGAGGAAGGCACATGGGACTACAGGCTGAGCACTTCTaGCCGCCGTACTCGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: RDEGSGMHKHPGGRHMGLQAEHF*PPYSNA Trigger: GGCATTCGAGTACGGCGGCCAGAAGTGCTCAGCCTG...TAGTCCCATGTGCCTTCCTCCAGGGTGCTTGTGCATCCCTGAGCCTTCATCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR TCA 90 bp | AGACTCAGCCTGTATGGGATGACCACCACTGGTCACTCCCAGCAGGTGTCCAGGCAGGATCCCCCACTTTaGTCCTGCTGTGTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLSLYGMTTTGHSQQVSRQDPPL*SCCVPP Trigger: TGGAGGAACACAGCAGGATCAAAGTGGGGGATCCTG...CCTGGACACCTGCTGGGAGTGACCAGTGGTGGTCATCCCATACAGGCTGAGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | GGGGTGGGGGTGGGACAGAAAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGGGGATGGCTTCCATCTaGCCCTTCAGGTCCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVGVGQKAISKPSHWAPEGMASI*PFRSFR Trigger: TCTGAAGGACCTGAAGGGCCAGATGGAAGCCATCCC...CTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTTTCTGTCCCACCCCCACCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | AAGAAGCTGGTGGGGAGCAGGGGGTCAGTGCAGAGATGTCAGTCATCTGGATGGCGACAACGCAGGGGATaGCTTCCATCTGGCCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KKLVGSRGSVQRCQSSGWRQRRG*LPSGPS Trigger: TGAAGGGCCAGATGGAAGCCATCCCCTGCGTTGTCG...CCATCCAGATGACTGACATCTCTGCACTGACCCCCTGCTCCCCACCAGCTTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | AAGAAGCTGGTGGGGAGCAGGGGGTCAGTGCAGAGATGTCAGTCATCTGGATGGGTGGTTGGTGCTGGGTaGCACACTGATGGGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KKLVGSRGSVQRCQSSGWVVGAG*HTDGLF Trigger: GAACAGCCCATCAGTGTGCCACCCAGCACCAACCAC...CCATCCAGATGACTGACATCTCTGCACTGACCCCCTGCTCCCCACCAGCTTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | GACAGAAAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGTTACTCCTCCCTCCCCCCGAAGGGCTGCTaGCCCACCACAGACCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: DRKPFLNLAIGLRSYSSLPPKGC*PTTDPV Trigger: TACTGGGTCTGTGGTGGGCCAGCAGCCCTTCGGGGG...GAGGGAGGAGTAACTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTTTCTGTC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR GCA 90 bp | AACCTAGCCATTGGGCTCCGGAGTTACTCCTCCCTCCCACGACACCACACAGAACCCACTCAGCATATCTaGCGCCTTCAGGAAGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLAIGLRSYSSLPRHHTEPTQHI*RLQEDL Trigger: CAGGTCTTCCTGAAGGCGGCAGATATGCTGAGTGGG...TTCTGTGTGGTGTCGTGGGAGGGAGGAGTAACTCCGGAGCCCAATGGCTAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR GCA 90 bp | GGACAGGCACCCAGTGGCCAGGACAGGGTCCAGCTCAGCTGTAGAGAGTCCAGAACGTCGGCCGAGCTGTaGACAAAATGGAAATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQAPSGQDRVQLSCRESRTSAEL*TKWKFF Trigger: GAAGAATTTCCATTTTGTGCACAGCTCGGCCGACGT...TCTGGACTCTCTACAGCTGAGCTGGACCCTGTCCTGGCCACTGGGTGCCTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR GCA 90 bp | GATCCTCCCCAATATGACCCGAAGCCTGGGCACCTGACTCCGAGGACAGGCACCGTGCTGTCAACCAGCTaGAGCGTCTCTCTGTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: DPPQYDPKPGHLTPRTGTVLSTS*SVSLYL Trigger: TAAATACAGAGAGACGCTGCAGCTGGTTGACAGCAC...GGTGCCTGTCCTCGGAGTCAGGTGCCCAGGCTTCGGGTCATATTGGGGAGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR GCA 90 bp | GTGACAGCTATACCAGTTCCATGTGGACCCCAGGCAAATGTCCTTAAAAAGTCAGCGCCCCCGAAGGGCTaGTGGCCCACCACAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTAIPVPCGPQANVLKKSAPPKG*WPTTDP Trigger: TGGGTCTGTGGTGGGCCAGCAGCCCTTCGGGGGCGC...TGACTTTTTAAGGACATTTGCCTGGGGTCCACATGGAACTGGTATAGCTGTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | GGGGTGGGGGTGGGACAGAAAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGGCATCGATCTCTGCTTaGATCACGGTCTTGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVGVGQKAISKPSHWAPEASISA*ITVLPC Trigger: ACAGGGCAAGACCGTGATCCAAGCAGAGATCGATGC...CTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTTTCTGTCCCACCCCCACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | AAGAAGCTGGTGGGGAGCAGGGGGTCAGTGCAGAGATGTCAGTCATCTGGATGGGCATGGCAGTGTCACTaGGCTTCCACAGAACCACGT | + |
|
Preference number: 4 (lower is better) Translates to: KKLVGSRGSVQRCQSSGWAWQCH*ASTEPR Trigger: ACGTGGTTCTGTGGAAGCCCAGTGACACTGCCATGC...CCATCCAGATGACTGACATCTCTGCACTGACCCCCTGCTCCCCACCAGCTTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | GAAGCAGAAGGCAGAGCTGGCCCTGGTACTGGTACCCCACCCTTCAGCGTAGCCCATGATGGGTTCCTGTaGGTCCTTGCTCTCAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: EAEGRAGPGTGTPPFSVAHDGFL*VLALND Trigger: ATCATTGAGAGCAAGGACCCACAGGAACCCATCATG...GGCTACGCTGAAGGGTGGGGTACCAGTACCAGGGCCAGCTCTGCCTTCTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | ATCATAAAAACTTCCACAGTGGCTGACCAGGTCTCTGGGAACCATGGCCAGGCACTCCTGGCTTGTCATTaGTTCCTGAGGCCCGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IIKTSTVADQVSGNHGQALLACH*FLRPGR Trigger: GCGCCCGGGCCTCAGGAACCAATGACAAGCCAGGAG...TGCCTGGCCATGGTTCCCAGAGACCTGGTCAGCCACTGTGGAAGTTTTTATGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | AGGGATGAAGGCTCAGGGATGCACAAGCACCCTGGAGGAAGGCACATGGGACTAGGTTGGCCCGTCGGCTaGCACAAACTGGATTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: RDEGSGMHKHPGGRHMGLGWPVG*HKLDYV Trigger: AACATAATCCAGTTTGTGCCAGCCGACGGGCCAACC...TAGTCCCATGTGCCTTCCTCCAGGGTGCTTGTGCATCCCTGAGCCTTCATCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | AAGAAGCTGGTGGGGAGCAGGGGGTCAGTGCAGAGATGTCAGTCATCTGGATGGTGCGAGCAAAGGCCTTaGCATCAATCACTGCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KKLVGSRGSVQRCQSSGWCEQRP*HQSLRR Trigger: TCTCCGCAGTGATTGATGCCAAGGCCTTTGCTCGCA...CCATCCAGATGACTGACATCTCTGCACTGACCCCCTGCTCCCCACCAGCTTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | AGGGATGAAGGCTCAGGGATGCACAAGCACCCTGGAGGAAGGCACATGGGACTAGTCTCCTTGATGACCTaGGGTGATGTCCAGCGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: RDEGSGMHKHPGGRHMGLVSLMT*GDVQRK Trigger: CTTACGCTGGACATCACCCCAGGTCATCAAGGAGAC...TAGTCCCATGTGCCTTCCTCCAGGGTGCTTGTGCATCCCTGAGCCTTCATCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR GCA 90 bp | AGGGATGAAGGCTCAGGGATGCACAAGCACCCTGGAGGAAGGCACATGGGACTACTTGGCCACCTTGTGTaGATGGTTAAAGGGCGACAA | + |
|
Preference number: 4 (lower is better) Translates to: RDEGSGMHKHPGGRHMGLLGHLV*MVKGRQ Trigger: TTGTCGCCCTTTAACCATGCACACAAGGTGGCCAAG...TAGTCCCATGTGCCTTCCTCCAGGGTGCTTGTGCATCCCTGAGCCTTCATCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR GCA 90 bp | AGGGATGAAGGCTCAGGGATGCACAAGCACCCTGGAGGAAGGCACATGGGACTATTCCACGGCGAACTTTaGGTTGAACCTGAAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RDEGSGMHKHPGGRHMGLFHGEL*VEPEEV Trigger: GACTTCTTCAGGTTCAACGCAAAGTTCGCCGTGGAA...TAGTCCCATGTGCCTTCCTCCAGGGTGCTTGTGCATCCCTGAGCCTTCATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR GCA 90 bp | AAGAAGCTGGTGGGGAGCAGGGGGTCAGTGCAGAGATGTCAGTCATCTGGATGGCTTGGCATCAATCACTaGGGAGAAGAAGGTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KKLVGSRGSVQRCQSSGWLGINH*GEEGPK Trigger: TTTGGGACCTTCTTCTCCGCAGTGATTGATGCCAAG...CCATCCAGATGACTGACATCTCTGCACTGACCCCCTGCTCCCCACCAGCTTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | AGACTCAGCCTGTATGGGATGACCACCACTGGTCACTCCCAGCAGGTGTCCAGGGAGAGAATGCTAAGATaGGCTCATTGGTCACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLSLYGMTTTGHSQQVSRERMLR*AHWSPS Trigger: TGAAGGTGACCAATGAGCCCATCTTAGCATTCTCTC...CCTGGACACCTGCTGGGAGTGACCAGTGGTGGTCATCCCATACAGGCTGAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | AGGGATGAAGGCTCAGGGATGCACAAGCACCCTGGAGGAAGGCACATGGGACTAGAGCTGTGCACAAAATaGAAATTCTTCCCGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RDEGSGMHKHPGGRHMGLELCTK*KFFPPH Trigger: GTGTGGCGGGAAGAATTTCCATTTTGTGCACAGCTC...TAGTCCCATGTGCCTTCCTCCAGGGTGCTTGTGCATCCCTGAGCCTTCATCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | AGACTCAGCCTGTATGGGATGACCACCACTGGTCACTCCCAGCAGGTGTCCAGGGCTCTCAATGATACATaGTTCCACGTAGTAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLSLYGMTTTGHSQQVSRALNDT*FHVVTH Trigger: GTGGGTTACTACGTGGAACCATGTATCATTGAGAGC...CCTGGACACCTGCTGGGAGTGACCAGTGGTGGTCATCCCATACAGGCTGAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | ATCATAAAAACTTCCACAGTGGCTGACCAGGTCTCTGGGAACCATGGCCAGGCAACAATCGCTTTATCCTaGGCGAACACTGCCCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: IIKTSTVADQVSGNHGQATIALS*ANTAPV Trigger: CACGGGGGCAGTGTTCGCCCAGGATAAAGCGATTGT...TGCCTGGCCATGGTTCCCAGAGACCTGGTCAGCCACTGTGGAAGTTTTTATGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR TCA 90 bp | GACAGAAAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGTTACTCCTCCCTCAGATCTCCTCCTTCATaGTGGGTTCCTGTGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DRKPFLNLAIGLRSYSSLRSPPS*WVPVGP Trigger: AGGACCCACAGGAACCCATCATGAAGGAGGAGATCT...GAGGGAGGAGTAACTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTTTCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CCA 90 bp | AAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGTTACTCCTCCCTCCCACGACTAAGATGGGCTCATTaGTCACCTTCAGAGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPFLNLAIGLRSYSSLPRLRWAH*SPSERR Trigger: CCTCCTCTCTGAAGGTGACCAATGAGCCCATCTTAG...TCGTGGGAGGGAGGAGTAACTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR TCA 90 bp | GACAGAAAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGTTACTCCTCCCTCGGTCCTTGCTCTCAATaGTACATGGTTCCACGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: DRKPFLNLAIGLRSYSSLGPCSQ*YMVPRS Trigger: ACTACGTGGAACCATGTATCATTGAGAGCAAGGACC...GAGGGAGGAGTAACTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTTTCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR GCA 90 bp | GTGACAGCTATACCAGTTCCATGTGGACCCCAGGCAAATGTCCTTAAAAAGTCATTGATGCCACAAAGGTaGTCTGAGCTGGTGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTAIPVPCGPQANVLKKSLMPQR*SELVTV Trigger: CACAGTCACCAGCTCAGAGCACCTTTGTGGCATCAA...TGACTTTTTAAGGACATTTGCCTGGGGTCCACATGGAACTGGTATAGCTGTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS TCA 90 bp | GATCTGCGGCCACAGCGACTTCGGCACGTAGAGGCGCGAGCAGGCTaGGCACTTCTGGCCGCCGTACTCGAATGCCGAGCGCAGCGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: DLRPQRLRHVEARAG*ALLAAVLECRAQRP Trigger: GGGACGCTGCGCTCGGCATTCGAGTACGGCGGCCAGAAGTGCTCAGCCTGCTCGCGCCTCTACGTGCCGAAGTCGCTGTGGCCGCAGATC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 90 bp | GGAGAGATGGCCGCCACGAAGCCCTCCAGTCCCCGGTACACCGTGTaGTTGGTGCTGGGTGGCACACTGATGGGCTGTTCCCCCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GEMAATKPSSPRYTV*LVLGGTLMGCSPSS Trigger: ACTGGAGGGGGAACAGCCCATCAGTGTGCCACCCAGCACCAACCACACGGTGTACCGGGGACTGGAGGGCTTCGTGGCGGCCATCTCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 90 bp | TGTCCCCGAAGGTTGGCCCGTCGGCTGGCACAAACTGGATTATGTTaGGGGGCAAGCCGGCCTCCCGGAGGATGCGGTAGACGGCGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: CPRRLARRLAQTGLC*GASRPPGGCGRRRS Trigger: GCTACGCCGTCTACCGCATCCTCCGGGAGGCCGGCTTGCCCCCCAACATAATCCAGTTTGTGCCAGCCGACGGGCCAACCTTCGGGGACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 90 bp | GGTCTTGGCAAGGACTTCCGCCCTTCGGGGCCCACTCAGCATATCTaGCGCCTTCAGGAAGACCTGGGCCCGGTCTGCCATGGGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLGKDFRPSGPTQHI*RLQEDLGPVCHGLQ Trigger: CTGAAGCCCATGGCAGACCGGGCCCAGGTCTTCCTGAAGGCGGCAGATATGCTGAGTGGGCCCCGAAGGGCGGAAGTCCTTGCCAAGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CAA 90 bp | GGACAGGCACCCAGTGGCCAGGACAGGGTCCAGCTCAGCTGTAGAGAGTCCAGACCTCCTGGCTTGTCATaGGTTCCTGAGGCCCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GQAPSGQDRVQLSCRESRPPGLS*VPEARA Trigger: CGCCCGGGCCTCAGGAACCAATGACAAGCCAGGAGG...TCTGGACTCTCTACAGCTGAGCTGGACCCTGTCCTGGCCACTGGGTGCCTGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 90 bp | GTCCACACCTCCTCGTCCCCGACAACGCAGGGGATGGCTTCCATCTaGCCCTTCAGGTCCTTCAGAGCCTTCTGCAGTGCATCCCGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VHTSSSPTTQGMASI*PFRSFRAFCSASRS Trigger: CGAGCGGGATGCACTGCAGAAGGCTCTGAAGGACCTGAAGGGCCAGATGGAAGCCATCCCCTGCGTTGTCGGGGACGAGGAGGTGTGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 90 bp | CACGAAGCCCTCCAGTCCCCGGTACACCGTGTGGTTGGTGCTGGGTaGCACACTGATGGGCTGTTCCCCCTCCAGTTCCACGGCGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: HEALQSPVHRVVGAG*HTDGLFPLQFHGEL Trigger: AAGTTCGCCGTGGAACTGGAGGGGGAACAGCCCATCAGTGTGCCACCCAGCACCAACCACACGGTGTACCGGGGACTGGAGGGCTTCGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 90 bp | GAGCGCAGCGTCCCGCTCACCACGCTGTCCACGTCGGCCGAGCTGTaGACAAAATGGAAATTCTTCCCGCCACACTCTCCAGCCAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: ERSVPLTTLSTSAEL*TKWKFFPPHSPAKR Trigger: ACGCTTGGCTGGAGAGTGTGGCGGGAAGAATTTCCATTTTGTGCACAGCTCGGCCGACGTGGACAGCGTGGTGAGCGGGACGCTGCGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 90 bp | CACTCTCCAGCCAAGCGTGGGAAGGTACGGAACCGGTCCAGGTTCTaGGCCACCTGCCTCCACAGGTGTTTGAAGGTGGGGACACTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HSPAKRGKVRNRSRF*ATCLHRCLKVGTLP Trigger: AGGCAGTGTCCCCACCTTCAAACACCTGTGGAGGCAGGTGGCCCAGAACCTGGACCGGTTCCGTACCTTCCCACGCTTGGCTGGAGAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CAA 90 bp | GAAGCAGAAGGCAGAGCTGGCCCTGGTACTGGTACCCCACCCTTCAGCGTAGCCTGGGGACCTCCTGGCTaGTCATTGGTTCCTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EAEGRAGPGTGTPPFSVAWGPPG*SLVPEA Trigger: GGCCTCAGGAACCAATGACAAGCCAGGAGGTCCCCA...GGCTACGCTGAAGGGTGGGGTACCAGTACCAGGGCCAGCTCTGCCTTCTGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 90 bp | GTCCCGCTCACCACGCTGTCCACGTCGGCCGAGCTGTGCACAAAATaGAAATTCTTCCCGCCACACTCTCCAGCCAAGCGTGGGAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VPLTTLSTSAELCTK*KFFPPHSPAKRGKV Trigger: TACCTTCCCACGCTTGGCTGGAGAGTGTGGCGGGAAGAATTTCCATTTTGTGCACAGCTCGGCCGACGTGGACAGCGTGGTGAGCGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 90 bp | GAGAATGCTAAGATGGGCTCATTGGTCACCTTCAGAGAGGAGGTGTaGTTCCATCGTAGCCCAGCGCCCCTCCAGGCATGGGACAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ENAKMGSLVTFREEV*FHRSPAPLQAWDSR Trigger: CCTGCTGTCCCATGCCTGGAGGGGCGCTGGGCTACGATGGAAGCACACCTCCTCTCTGAAGGTGACCAATGAGCCCATCTTAGCATTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 90 bp | GCCAAGCGTGGGAAGGTACGGAACCGGTCCAGGTTCTGGGCCACCTaGCTCCACAGGTGTTTGAAGGTGGGGACACTGCCTGTAAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: AKRGKVRNRSRFWAT*LHRCLKVGTLPVKL Trigger: CAATTTTACAGGCAGTGTCCCCACCTTCAAACACCTGTGGAGGCAGGTGGCCCAGAACCTGGACCGGTTCCGTACCTTCCCACGCTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 90 bp | CACTGGCCCCCTGCCAGGATGCTGAGGCTGGGCGAGGAACGTGCATaGTCCAACCACTTCTTAATGCGAGCAAAGGCCTTGGCATCAATC | + |
|
Preference number: 5 (lower is better) Translates to: HWPPARMLRLGEERA*SNHFLMRAKALASI Trigger: GATTGATGCCAAGGCCTTTGCTCGCATTAAGAAGTGGTTGGAGCATGCACGTTCCTCGCCCAGCCTCAGCATCCTGGCAGGGGGCCAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 90 bp | GTTACACTGGCCCCCTGCCAGGATGCTGAGGCTGGGCGAGGAACGTaGATGCTCCAACCACTTCTTAATGCGAGCAAAGGCCTTGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: VTLAPCQDAEAGRGT*MLQPLLNASKGLGI Trigger: GATGCCAAGGCCTTTGCTCGCATTAAGAAGTGGTTGGAGCATGCACGTTCCTCGCCCAGCCTCAGCATCCTGGCAGGGGGCCAGTGTAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 90 bp | CATCCTCGTAGCCTCCTGGACAATCGCTTTATCCTGGGCGAACACTaGCCCCGTGAGGCCATAGCTGGTAGTGCTGTCAACCAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HPRSLLDNRFILGEH*PREAIAGSAVNQLQ Trigger: CTGCAGCTGGTTGACAGCACTACCAGCTATGGCCTCACGGGGGCAGTGTTCGCCCAGGATAAAGCGATTGTCCAGGAGGCTACGAGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 90 bp | CATCCCGCTCGGGGCTTCCCTGAGAGAATGCTAAGATGGGCTCATTaGTCACCTTCAGAGAGGAGGTGTGCTTCCATCGTAGCCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: HPARGFPERMLRWAH*SPSERRCASIVAQR Trigger: GCGCTGGGCTACGATGGAAGCACACCTCCTCTCTGAAGGTGACCAATGAGCCCATCTTAGCATTCTCTCAGGGAAGCCCCGAGCGGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 90 bp | GTGCACAAAATGGAAATTCTTCCCGCCACACTCTCCAGCCAAGCGTaGGAAGGTACGGAACCGGTCCAGGTTCTGGGCCACCTGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VHKMEILPATLSSQA*EGTEPVQVLGHLPP Trigger: TGGAGGCAGGTGGCCCAGAACCTGGACCGGTTCCGTACCTTCCCACGCTTGGCTGGAGAGTGTGGCGGGAAGAATTTCCATTTTGTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CAA 90 bp | AGACTCAGCCTGTATGGGATGACCACCACTGGTCACTCCCAGCAGGTGTCCAGGTGTCCCACCATGGTCTaGGCAAGGACTTCCGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RLSLYGMTTTGHSQQVSRCPTMV*ARTSAL Trigger: AAGGGCGGAAGTCCTTGCCAAGACCATGGTGGGACA...CCTGGACACCTGCTGGGAGTGACCAGTGGTGGTCATCCCATACAGGCTGAGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CAA 90 bp | AGACTCAGCCTGTATGGGATGACCACCACTGGTCACTCCCAGCAGGTGTCCAGGTGCCTCCACAGGTGTTaGAAGGTGGGGACACTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RLSLYGMTTTGHSQQVSRCLHRC*KVGTLP Trigger: AGGCAGTGTCCCCACCTTCAAACACCTGTGGAGGCA...CCTGGACACCTGCTGGGAGTGACCAGTGGTGGTCATCCCATACAGGCTGAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CAA 90 bp | GATGAGGAGAGAAAAGCAGACAGGCGGGGAACCTGCCAGGTACCAGGGCGTTCCGCTAAGATGGGCTCATaGGTCACCTTCAGAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DEERKADRRGTCQVPGRSAKMGS*VTFREE Trigger: CTCCTCTCTGAAGGTGACCAATGAGCCCATCTTAGC...GGAACGCCCTGGTACCTGGCAGGTTCCCCGCCTGTCTGCTTTTCTCTCCTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CAA 90 bp | GGGGTGGGGGTGGGACAGAAAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGAGCATCGATCTCTGCTaGGATCACGGTCTTGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GVGVGQKAISKPSHWAPESIDLC*DHGLAL Trigger: CAGGGCAAGACCGTGATCCAAGCAGAGATCGATGCT...CTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTTTCTGTCCCACCCCCACCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CAA 90 bp | AAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGTTACTCCTCCCTCCCACGATCCAGCAGTCGCCCTTaGATCTGCGGCCACAGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: KPFLNLAIGLRSYSSLPRSSSRP*ICGHSD Trigger: GTCGCTGTGGCCGCAGATCAAAGGGCGACTGCTGGA...TCGTGGGAGGGAGGAGTAACTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CAA 90 bp | AACCTAGCCATTGGGCTCCGGAGTTACTCCTCCCTCCCACGACACCACACAGAAGCAGGATCCCCCACTTaGATCCTGCTGTGTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NLAIGLRSYSSLPRHHTEAGSPT*ILLCSS Trigger: GGAGGAACACAGCAGGATCAAAGTGGGGGATCCTGC...TTCTGTGTGGTGTCGTGGGAGGGAGGAGTAACTCCGGAGCCCAATGGCTAGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CAA 90 bp | AGACTCAGCCTGTATGGGATGACCACCACTGGTCACTCCCAGCAGGTGTCCAGGATGCGAGCAAAGGCCTaGGCATCAATCACTGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLSLYGMTTTGHSQQVSRMRAKA*ASITAE Trigger: CTCCGCAGTGATTGATGCCAAGGCCTTTGCTCGCAT...CCTGGACACCTGCTGGGAGTGACCAGTGGTGGTCATCCCATACAGGCTGAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS TCA 90 bp | AGGTCCTTCAGAGCCTTCTGCAGTGCATCCCGCTCGGGGCTTCCCTaGGAGAATGCTAAGATGGGCTCATTGGTCACCTTCAGAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSFRAFCSASRSGLP*ENAKMGSLVTFREE Trigger: CTCCTCTCTGAAGGTGACCAATGAGCCCATCTTAGCATTCTCTCAGGGAAGCCCCGAGCGGGATGCACTGCAGAAGGCTCTGAAGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CAA 90 bp | GGGGTGGGGGTGGGACAGAAAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGCAGAACTTGGCCACCTaGTGTGCATGGTTAAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GVGVGQKAISKPSHWAPEQNLAT*CAWLKG Trigger: GCCCTTTAACCATGCACACAAGGTGGCCAAGTTCTG...CTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTTTCTGTCCCACCCCCACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CAA 90 bp | GACAGAAAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGTTACTCCTCCCTCCGGTACACCGTGTGGTaGGTGCTGGGTGGCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: DRKPFLNLAIGLRSYSSLRYTVW*VLGGTL Trigger: CAGTGTGCCACCCAGCACCAACCACACGGTGTACCG...GAGGGAGGAGTAACTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTTTCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 90 bp | CACGGCGAACTTTGCGTTGAACCTGAAGAAGTCGATGAGTTCGGCTaGAGCATCGATCTCTGCTTGGATCACGGTCTTGCCCTGTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HGELCVEPEEVDEFG*SIDLCLDHGLALSH Trigger: GTGGGACAGGGCAAGACCGTGATCCAAGCAGAGATCGATGCTGCAGCCGAACTCATCGACTTCTTCAGGTTCAACGCAAAGTTCGCCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 90 bp | TGGCACACTGATGGGCTGTTCCCCCTCCAGTTCCACGGCGAACTTTaGGTTGAACCTGAAGAAGTCGATGAGTTCGGCTGCAGCATCGAT | + |
|
Preference number: 5 (lower is better) Translates to: WHTDGLFPLQFHGEL*VEPEEVDEFGCSID Trigger: ATCGATGCTGCAGCCGAACTCATCGACTTCTTCAGGTTCAACGCAAAGTTCGCCGTGGAACTGGAGGGGGAACAGCCCATCAGTGTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 90 bp | TCTGCAGTGCATCCCGCTCGGGGCTTCCCTGAGAGAATGCTAAGATaGGCTCATTGGTCACCTTCAGAGAGGAGGTGTGCTTCCATCGTA | + |
|
Preference number: 5 (lower is better) Translates to: SAVHPARGFPERMLR*AHWSPSERRCASIV Trigger: TACGATGGAAGCACACCTCCTCTCTGAAGGTGACCAATGAGCCCATCTTAGCATTCTCTCAGGGAAGCCCCGAGCGGGATGCACTGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CAA 90 bp | ATCATAAAAACTTCCACAGTGGCTGACCAGGTCTCTGGGAACCATGGCCAGGCACCAATCGCGGTGAAGTaGAAGGGAGAGATGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: IIKTSTVADQVSGNHGQAPIAVK*KGEMAA Trigger: GGCGGCCATCTCTCCCTTCAACTTCACCGCGATTGG...TGCCTGGCCATGGTTCCCAGAGACCTGGTCAGCCACTGTGGAAGTTTTTATGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 90 bp | GTTGAACCTGAAGAAGTCGATGAGTTCGGCTGCAGCATCGATCTCTaGTTGGATCACGGTCTTGCCCTGTCCCACCATGGTCTTGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VEPEEVDEFGCSIDL*LDHGLALSHHGLGK Trigger: CTTGCCAAGACCATGGTGGGACAGGGCAAGACCGTGATCCAAGCAGAGATCGATGCTGCAGCCGAACTCATCGACTTCTTCAGGTTCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 90 bp | AACCTGAAGAAGTCGATGAGTTCGGCTGCAGCATCGATCTCTGCTTaGATCACGGTCTTGCCCTGTCCCACCATGGTCTTGGCAAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: NLKKSMSSAAASISA*ITVLPCPTMVLART Trigger: AGTCCTTGCCAAGACCATGGTGGGACAGGGCAAGACCGTGATCCAAGCAGAGATCGATGCTGCAGCCGAACTCATCGACTTCTTCAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 90 bp | CTCCAACCACTTCTTAATGCGAGCAAAGGCCTTGGCATCAATCACTaGGGAGAAGAAGGTCCCAAAGTCCTCTGCAGGATCCCCCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQPLLNASKGLGINH*GEEGPKVLCRIPHF Trigger: AAAGTGGGGGATCCTGCAGAGGACTTTGGGACCTTCTTCTCCGCAGTGATTGATGCCAAGGCCTTTGCTCGCATTAAGAAGTGGTTGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS-3UTR CAA 90 bp | AAGCCATTTCTAAACCTAGCCATTGGGCTCCGGAGTTACTCCTCCCTCCCACGAACGGCGAACTTTGCGTaGAACCTGAAGAAGTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: KPFLNLAIGLRSYSSLPRTANFA*NLKKSM Trigger: CATCGACTTCTTCAGGTTCAACGCAAAGTTCGCCGT...TCGTGGGAGGGAGGAGTAACTCCGGAGCCCAATGGCTAGGTTTAGAAATGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 90 bp | GTTGAGCAAGGCCTTATCAGCATAGCAGAACTTGGCCACCTTGTGTaGATGGTTAAAGGGCGACAACTGGTACTGTATATCGGAGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VEQGLISIAELGHLV*MVKGRQLVLYIGGP Trigger: TGGACCTCCGATATACAGTACCAGTTGTCGCCCTTTAACCATGCACACAAGGTGGCCAAGTTCTGCTATGCTGATAAGGCCTTGCTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 72 bp | GTGTGCTTCCATCGTAGCCCAGCGCCCCTCCAGGCATaGGACAGCAGGGATCGGCGGAGCGACGGCAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: VCFHRSPAPLQA*DSRDRRSDGSG Trigger: GCCGCTGCCGTCGCTCCGCCGATCCCTGCTGTCCCATGCCTGGAGGGGCGCTGGGCTACGATGGAAGCACAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS TCA 72 bp | CCACAGCGACTTCGGCACGTAGAGGCGCGAGCAGGCTaGGCACTTCTGGCCGCCGTACTCGAATGCCGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: PQRLRHVEARAG*ALLAAVLECRA Trigger: CGCTCGGCATTCGAGTACGGCGGCCAGAAGTGCTCAGCCTGCTCGCGCCTCTACGTGCCGAAGTCGCTGTGG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 72 bp | GCCGCCACGAAGCCCTCCAGTCCCCGGTACACCGTGTaGTTGGTGCTGGGTGGCACACTGATGGGCTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: AATKPSSPRYTV*LVLGGTLMGCS Trigger: GGAACAGCCCATCAGTGTGCCACCCAGCACCAACCACACGGTGTACCGGGGACTGGAGGGCTTCGTGGCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CAA 72 bp | GCCACGAAGCCCTCCAGTCCCCGGTACACCGTGTGGTaGGTGCTGGGTGGCACACTGATGGGCTGTTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ATKPSSPRYTVW*VLGGTLMGCSP Trigger: GGGGGAACAGCCCATCAGTGTGCCACCCAGCACCAACCACACGGTGTACCGGGGACTGGAGGGCTTCGTGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CAA 90 bp | GAGATGGCCGCCACGAAGCCCTCCAGTCCCCGGTACACCGTGTGGTaGGTGCTGGGTGGCACACTGATGGGCTGTTCCCCCTCCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: EMAATKPSSPRYTVW*VLGGTLMGCSPSSS Trigger: GGAACTGGAGGGGGAACAGCCCATCAGTGTGCCACCCAGCACCAACCACACGGTGTACCGGGGACTGGAGGGCTTCGTGGCGGCCATCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS TCA 72 bp | CCCGGTACACCGTGTGGTTGGTGCTGGGTGGCACACTaGTGGGCTGTTCCCCCTCCAGTTCCACGGCGAACT | + |
|
Preference number: 6 (lower is better) Translates to: PGTPCGWCWVAH*WAVPPPVPRRT Trigger: AGTTCGCCGTGGAACTGGAGGGGGAACAGCCCATCAGTGTGCCACCCAGCACCAACCACACGGTGTACCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 72 bp | AAGGACTTCCGCCCTTCGGGGCCCACTCAGCATATCTaGCGCCTTCAGGAAGACCTGGGCCCGGTCTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: KDFRPSGPTQHI*RLQEDLGPVCH Trigger: ATGGCAGACCGGGCCCAGGTCTTCCTGAAGGCGGCAGATATGCTGAGTGGGCCCCGAAGGGCGGAAGTCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 72 bp | TCATTGGTTCCTGAGGCCCGGGCGCCCCCGAAGGGCTaGTGGCCCACCACAGACCCAGTAGACTTATCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLVPEARAPPKG*WPTTDPVDLSL Trigger: CAACGATAAGTCTACTGGGTCTGTGGTGGGCCAGCAGCCCTTCGGGGGCGCCCGGGCCTCAGGAACCAATGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 72 bp | CTCCAGTCCCCGGTACACCGTGTGGTTGGTGCTGGGTaGCACACTGATGGGCTGTTCCCCCTCCAGTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LQSPVHRVVGAG*HTDGLFPLQFH Trigger: GTGGAACTGGAGGGGGAACAGCCCATCAGTGTGCCACCCAGCACCAACCACACGGTGTACCGGGGACTGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 72 bp | AGGTTGGCCCGTCGGCTGGCACAAACTGGATTATGTTaGGGGGCAAGCCGGCCTCCCGGAGGATGCGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: RLARRLAQTGLC*GASRPPGGCGR Trigger: TCTACCGCATCCTCCGGGAGGCCGGCTTGCCCCCCAACATAATCCAGTTTGTGCCAGCCGACGGGCCAACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 72 bp | TTGGTTCCTGAGGCCCGGGCGCCCCCGAAGGGCTGCTaGCCCACCACAGACCCAGTAGACTTATCGTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LVPEARAPPKGC*PTTDPVDLSLM Trigger: CATCAACGATAAGTCTACTGGGTCTGTGGTGGGCCAGCAGCCCTTCGGGGGCGCCCGGGCCTCAGGAACCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 72 bp | AGCGTAAGATGTAGTGGGGACCTCCTGGCTTGTCATTaGTTCCTGAGGCCCGGGCGCCCCCGAAGGGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SVRCSGDLLACH*FLRPGRPRRAA Trigger: AGCAGCCCTTCGGGGGCGCCCGGGCCTCAGGAACCAATGACAAGCCAGGAGGTCCCCACTACATCTTACGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CAA 72 bp | GCTTGGATCACGGTCTTGCCCTGTCCCACCATGGTCTaGGCAAGGACTTCCGCCCTTCGGGGCCCACTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AWITVLPCPTMV*ARTSALRGPLS Trigger: GCTGAGTGGGCCCCGAAGGGCGGAAGTCCTTGCCAAGACCATGGTGGGACAGGGCAAGACCGTGATCCAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CAA 72 bp | GGAGCGCCTGCCAGGTTGCCTCCAATCGCGGTGAAGTaGAAGGGAGAGATGGCCGCCACGAAGCCCTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GAPARLPPIAVK*KGEMAATKPSS Trigger: ACTGGAGGGCTTCGTGGCGGCCATCTCTCCCTTCAACTTCACCGCGATTGGAGGCAACCTGGCAGGCGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CAA 90 bp | ATTAAGGCCGGAGCGCCTGCCAGGTTGCCTCCAATCGCGGTGAAGTaGAAGGGAGAGATGGCCGCCACGAAGCCCTCCAGTCCCCGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: IKAGAPARLPPIAVK*KGEMAATKPSSPRY Trigger: GTACCGGGGACTGGAGGGCTTCGTGGCGGCCATCTCTCCCTTCAACTTCACCGCGATTGGAGGCAACCTGGCAGGCGCTCCGGCCTTAAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS TCA 72 bp | CCACTGACTCGTTACACTGGCCCCCTGCCAGGATGCTaGGGCTGGGCGAGGAACGTGCATGCTCCAACCACT | + |
|
Preference number: 6 (lower is better) Translates to: PLTRYTGPLPGC*GWARNVHAPTT Trigger: AGTGGTTGGAGCATGCACGTTCCTCGCCCAGCCTCAGCATCCTGGCAGGGGGCCAGTGTAACGAGTCAGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 72 bp | GCATGGCAGTGTCACTGGGCTTCCACAGAACCACGTTaGCCATTAAGGCCGGAGCGCCTGCCAGGTTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AWQCHWASTEPR*PLRPERLPGCL Trigger: GAGGCAACCTGGCAGGCGCTCCGGCCTTAATGGGCAACGTGGTTCTGTGGAAGCCCAGTGACACTGCCATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 72 bp | GGGAAGGTACGGAACCGGTCCAGGTTCTGGGCCACCTaGCTCCACAGGTGTTTGAAGGTGGGGACACTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GKVRNRSRFWAT*LHRCLKVGTLP Trigger: AGGCAGTGTCCCCACCTTCAAACACCTGTGGAGGCAGGTGGCCCAGAACCTGGACCGGTTCCGTACCTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 72 bp | CTTGGATCACGGTCTTGCCCTGTCCCACCATGGTCTTaGCAAGGACTTCCGCCCTTCGGGGCCCACTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LGSRSCPVPPWS*QGLPPFGAHSA Trigger: TGCTGAGTGGGCCCCGAAGGGCGGAAGTCCTTGCCAAGACCATGGTGGGACAGGGCAAGACCGTGATCCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CAA 90 bp | TTCCACAGAACCACGTTGCCCATTAAGGCCGGAGCGCCTGCCAGGTaGCCTCCAATCGCGGTGAAGTTGAAGGGAGAGATGGCCGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: FHRTTLPIKAGAPAR*PPIAVKLKGEMAAT Trigger: CGTGGCGGCCATCTCTCCCTTCAACTTCACCGCGATTGGAGGCAACCTGGCAGGCGCTCCGGCCTTAATGGGCAACGTGGTTCTGTGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 72 bp | GCCCCCTGCCAGGATGCTGAGGCTGGGCGAGGAACGTaGATGCTCCAACCACTTCTTAATGCGAGCAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: APCQDAEAGRGT*MLQPLLNASKG Trigger: GCCTTTGCTCGCATTAAGAAGTGGTTGGAGCATGCACGTTCCTCGCCCAGCCTCAGCATCCTGGCAGGGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CAA 72 bp | AGCATGGCAGTGTCACTGGGCTTCCACAGAACCACGTaGCCCATTAAGGCCGGAGCGCCTGCCAGGTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SMAVSLGFHRTT*PIKAGAPARLP Trigger: AGGCAACCTGGCAGGCGCTCCGGCCTTAATGGGCAACGTGGTTCTGTGGAAGCCCAGTGACACTGCCATGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 72 bp | AAGATGGGCTCATTGGTCACCTTCAGAGAGGAGGTGTaGTTCCATCGTAGCCCAGCGCCCCTCCAGGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: KMGSLVTFREEV*FHRSPAPLQAW Trigger: CCATGCCTGGAGGGGCGCTGGGCTACGATGGAAGCACACCTCCTCTCTGAAGGTGACCAATGAGCCCATCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 72 bp | CGGCTGCAGCATCGATCTCTGCTTGGATCACGGTCTTaGCCTGTCCCACCATGGTCTTGGCAAGGACTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: RLQHRSLLGSRS*PVPPWSWQGLP Trigger: CGGAAGTCCTTGCCAAGACCATGGTGGGACAGGGCAAGACCGTGATCCAAGCAGAGATCGATGCTGCAGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 72 bp | GTCCCGCTCACCACGCTGTCCACGTCGGCCGAGCTGTaGACAAAATGGAAATTCTTCCCGCCACACTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VPLTTLSTSAEL*TKWKFFPPHSP Trigger: TGGAGAGTGTGGCGGGAAGAATTTCCATTTTGTGCACAGCTCGGCCGACGTGGACAGCGTGGTGAGCGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 72 bp | ATGGAAATTCTTCCCGCCACACTCTCCAGCCAAGCGTaGGAAGGTACGGAACCGGTCCAGGTTCTGGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: MEILPATLSSQA*EGTEPVQVLGH Trigger: GTGGCCCAGAACCTGGACCGGTTCCGTACCTTCCCACGCTTGGCTGGAGAGTGTGGCGGGAAGAATTTCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 72 bp | TTGCCAGCAGCGTTCCTCAGCATCCTCGTAGCCTCCTaGACAATCGCTTTATCCTGGGCGAACACTGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LPAAFLSILVAS*TIALSWANTAP Trigger: GGGGGCAGTGTTCGCCCAGGATAAAGCGATTGTCCAGGAGGCTACGAGGATGCTGAGGAACGCTGCTGGCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 72 bp | AGCCTCCTGGACAATCGCTTTATCCTGGGCGAACACTaGCCCCGTGAGGCCATAGCTGGTAGTGCTGTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SLLDNRFILGEH*PREAIAGSAVN Trigger: GTTGACAGCACTACCAGCTATGGCCTCACGGGGGCAGTGTTCGCCCAGGATAAAGCGATTGTCCAGGAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 72 bp | ACCACGCTGTCCACGTCGGCCGAGCTGTGCACAAAATaGAAATTCTTCCCGCCACACTCTCCAGCCAAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: TTLSTSAELCTK*KFFPPHSPAKR Trigger: ACGCTTGGCTGGAGAGTGTGGCGGGAAGAATTTCCATTTTGTGCACAGCTCGGCCGACGTGGACAGCGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CAA 72 bp | TCGGCTGCAGCATCGATCTCTGCTTGGATCACGGTCTaGCCCTGTCCCACCATGGTCTTGGCAAGGACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SAAASISAWITV*PCPTMVLARTS Trigger: GGAAGTCCTTGCCAAGACCATGGTGGGACAGGGCAAGACCGTGATCCAAGCAGAGATCGATGCTGCAGCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 72 bp | GATGGGCTGTTCCCCCTCCAGTTCCACGGCGAACTTTaGGTTGAACCTGAAGAAGTCGATGAGTTCGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: DGLFPLQFHGEL*VEPEEVDEFGC Trigger: GCAGCCGAACTCATCGACTTCTTCAGGTTCAACGCAAAGTTCGCCGTGGAACTGGAGGGGGAACAGCCCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 72 bp | CATCCCGCTCGGGGCTTCCCTGAGAGAATGCTAAGATaGGCTCATTGGTCACCTTCAGAGAGGAGGTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: HPARGFPERMLR*AHWSPSERRCA Trigger: AGCACACCTCCTCTCTGAAGGTGACCAATGAGCCCATCTTAGCATTCTCTCAGGGAAGCCCCGAGCGGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CAA 72 bp | GGCTGTTCCCCCTCCAGTTCCACGGCGAACTTTGCGTaGAACCTGAAGAAGTCGATGAGTTCGGCTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GCSPSSSTANFA*NLKKSMSSAAA Trigger: TGCTGCAGCCGAACTCATCGACTTCTTCAGGTTCAACGCAAAGTTCGCCGTGGAACTGGAGGGGGAACAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CAA 90 bp | GAACCTGAAGAAGTCGATGAGTTCGGCTGCAGCATCGATCTCTGCTaGGATCACGGTCTTGCCCTGTCCCACCATGGTCTTGGCAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: EPEEVDEFGCSIDLC*DHGLALSHHGLGKD Trigger: GTCCTTGCCAAGACCATGGTGGGACAGGGCAAGACCGTGATCCAAGCAGAGATCGATGCTGCAGCCGAACTCATCGACTTCTTCAGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS TCA 72 bp | GACACTGCCTGTAAAATTGATGCCACAAAGGTGCTCTaGGCTGGTGACTGTGTCCCCGAAGGTTGGCCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: DTACKIDATKVL*AGDCVPEGWPV Trigger: GACGGGCCAACCTTCGGGGACACAGTCACCAGCTCAGAGCACCTTTGTGGCATCAATTTTACAGGCAGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 72 bp | GAAGAAGTCGATGAGTTCGGCTGCAGCATCGATCTCTaGTTGGATCACGGTCTTGCCCTGTCCCACCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: EEVDEFGCSIDL*LDHGLALSHHG Trigger: ACCATGGTGGGACAGGGCAAGACCGTGATCCAAGCAGAGATCGATGCTGCAGCCGAACTCATCGACTTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 72 bp | AAGTCGATGAGTTCGGCTGCAGCATCGATCTCTGCTTaGATCACGGTCTTGCCCTGTCCCACCATGGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KSMSSAAASISA*ITVLPCPTMVL Trigger: CAAGACCATGGTGGGACAGGGCAAGACCGTGATCCAAGCAGAGATCGATGCTGCAGCCGAACTCATCGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CAA 72 bp | GAAGTCGATGAGTTCGGCTGCAGCATCGATCTCTGCTaGGATCACGGTCTTGCCCTGTCCCACCATGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: EVDEFGCSIDLC*DHGLALSHHGL Trigger: AAGACCATGGTGGGACAGGGCAAGACCGTGATCCAAGCAGAGATCGATGCTGCAGCCGAACTCATCGACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CAA 90 bp | ACACTGATGGGCTGTTCCCCCTCCAGTTCCACGGCGAACTTTGCGTaGAACCTGAAGAAGTCGATGAGTTCGGCTGCAGCATCGATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TLMGCSPSSSTANFA*NLKKSMSSAAASIS Trigger: AGAGATCGATGCTGCAGCCGAACTCATCGACTTCTTCAGGTTCAACGCAAAGTTCGCCGTGGAACTGGAGGGGGAACAGCCCATCAGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS TCA 72 bp | CTTTCCTGGCAGCCAAGGCAGCATCGATGGCTCTGTTaGGCAAGGCCTTATCAGCATAGCAGAACTTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSWQPRQHRWLC*ARPYQHSRTWP Trigger: TGGCCAAGTTCTGCTATGCTGATAAGGCCTTGCTCAACAGAGCCATCGATGCTGCCTTGGCTGCCAGGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CCA 72 bp | CGGGGCTTCCCTGAGAGAATGCTAAGATGGGCTCATTaGTCACCTTCAGAGAGGAGGTGTGCTTCCATCGTA | + |
|
Preference number: 6 (lower is better) Translates to: RGFPERMLRWAH*SPSERRCASIV Trigger: TACGATGGAAGCACACCTCCTCTCTGAAGGTGACCAATGAGCCCATCTTAGCATTCTCTCAGGGAAGCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 72 bp | CTTTGCGTTGAACCTGAAGAAGTCGATGAGTTCGGCTaGAGCATCGATCTCTGCTTGGATCACGGTCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LCVEPEEVDEFG*SIDLCLDHGLA Trigger: GGCAAGACCGTGATCCAAGCAGAGATCGATGCTGCAGCCGAACTCATCGACTTCTTCAGGTTCAACGCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 72 bp | ATCAATCACTGCGGAGAAGAAGGTCCCAAAGTCCTCTaGAGGATCCCCCACTTTGATCCTGCTGTGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: INHCGEEGPKVL*RIPHFDPAVFL Trigger: GAGGAACACAGCAGGATCAAAGTGGGGGATCCTGCAGAGGACTTTGGGACCTTCTTCTCCGCAGTGATTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CAA 90 bp | GAGGAACGTGCATGCTCCAACCACTTCTTAATGCGAGCAAAGGCCTaGGCATCAATCACTGCGGAGAAGAAGGTCCCAAAGTCCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: EERACSNHFLMRAKA*ASITAEKKVPKSSA Trigger: TGCAGAGGACTTTGGGACCTTCTTCTCCGCAGTGATTGATGCCAAGGCCTTTGCTCGCATTAAGAAGTGGTTGGAGCATGCACGTTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS CAA 72 bp | GCATGCTCCAACCACTTCTTAATGCGAGCAAAGGCCTaGGCATCAATCACTGCGGAGAAGAAGGTCCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: ACSNHFLMRAKA*ASITAEKKVPK Trigger: CTTTGGGACCTTCTTCTCCGCAGTGATTGATGCCAAGGCCTTTGCTCGCATTAAGAAGTGGTTGGAGCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||
| CDS GCA 72 bp | GGCCTTATCAGCATAGCAGAACTTGGCCACCTTGTGTaGATGGTTAAAGGGCGACAACTGGTACTGTATATC | + |
|
Preference number: 6 (lower is better) Translates to: GLISIAELGHLV*MVKGRQLVLYI Trigger: GATATACAGTACCAGTTGTCGCCCTTTAACCATGCACACAAGGTGGCCAAGTTCTGCTATGCTGATAAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039818.10 |
||