Pregenerated sensors for ALDH3B3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037263Ensembl transcript IDs: ENSMUST00000025794.7, ENSMUST00000179433.8, ENSMUST00000189124.2
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGACTCAGCCTCTCCACAGGCAGGACTTGCAGAGGGATCGGGCTGTaGCAGGGAGAGCCTGCTCTCCAGGATAGGGAATCTCAGGGTCTG | + |
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Preference number: 1 (lower is better) Translates to: RLSLSTGRTCRGIGL*QGEPALQDRESQGL Trigger: CAGACCCTGAGATTCCCTATCCTGGAGAGCAGGCTCTCCCTGTCACAGCCCGATCCCTCTGCAAGTCCTGCCTGTGGAGAGGCTGAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
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| 3UTR TCA 90 bp | TCGATCCCACTCCTCCAAAAGGAAGGCTGGACAGGGTCATGTACATaGAGCCATCGTTCCCACAGAAGCCCCCGCTGCTGGTCCGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: SIPLLQKEGWTGSCT*SHRSHRSPRCWSGP Trigger: TGGCCCGGACCAGCAGCGGGGGCTTCTGTGGGAACGATGGCTTCATGTACATGACCCTGTCCAGCCTTCCTTTTGGAGGAGTGGGATCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
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| 3UTR GCA 90 bp | GGGAGTGAGAAGACAGCTCACAGCTTCTGGCTGTGTGTCTGGGGCTaGGGCACTGGAGGCTCCCAGTGTTTCTGTACCTCACCGAGTACC | + |
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Preference number: 1 (lower is better) Translates to: GSEKTAHSFWLCVWG*GTGGSQCFCTSPST Trigger: GGTACTCGGTGAGGTACAGAAACACTGGGAGCCTCCAGTGCCGCAGCCCCAGACACACAGCCAGAAGCTGTGAGCTGTCTTCTCACTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR CCA 90 bp | GAAGACAGCTCACAGCTTCTGGCTGTGTGTCTGGGGCTGCGGCACTaGAGGCTCCCAGTGTTTCTGTACCTCACCGAGTACCTCCTAGGG | + |
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Preference number: 1 (lower is better) Translates to: EDSSQLLAVCLGLRH*RLPVFLYLTEYLLG Trigger: CCCTAGGAGGTACTCGGTGAGGTACAGAAACACTGGGAGCCTCCAGTGCCGCAGCCCCAGACACACAGCCAGAAGCTGTGAGCTGTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR CCA 90 bp | TTAGGTCCAGAAAGGTGCCTCCAGTATGAAGGGTCTCAGCCCAGGTaGGCTGTGTGCCAGGGTCAGGGACAGGAGACTCACCAATGTAGC | + |
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Preference number: 1 (lower is better) Translates to: LGPERCLQYEGSQPR*AVCQGQGQETHQCS Trigger: GCTACATTGGTGAGTCTCCTGTCCCTGACCCTGGCACACAGCCCACCTGGGCTGAGACCCTTCATACTGGAGGCACCTTTCTGGACCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
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| 3UTR TCA 90 bp | TTACACGGGGTGGCCTTCCCGAGAGCATCAGGTGGGTCCCAAAGATaGCTTCCCACCCTCAGTTGCAAAGCTACACTGTGTGTGGGCTAC | + |
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Preference number: 1 (lower is better) Translates to: LHGVAFPRASGGSQR*LPTLSCKATLCVGY Trigger: GTAGCCCACACACAGTGTAGCTTTGCAACTGAGGGTGGGAAGTCATCTTTGGGACCCACCTGATGCTCTCGGGAAGGCCACCCCGTGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR TCA 90 bp | TCAGTTGAGGACTCAGACTTTAGGTCCAGAAAGGTGCCTCCAGTATaGAGGGTCTCAGCCCAGGTGGGCTGTGTGCCAGGGTCAGGGACA | + |
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Preference number: 1 (lower is better) Translates to: SVEDSDFRSRKVPPV*RVSAQVGCVPGSGT Trigger: TGTCCCTGACCCTGGCACACAGCCCACCTGGGCTGAGACCCTTCATACTGGAGGCACCTTTCTGGACCTAAAGTCTGAGTCCTCAACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
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| 3UTR CCA 90 bp | AGCTTAAATAGGTTGGGGCAGGGCAGCAGGAGAGAGGAGTCGGTGTaGTGTTTACAGAAGGGTGCAGCTCTCAGAGCCGATAGCCCATCT | + |
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Preference number: 1 (lower is better) Translates to: SLNRLGQGSRREESV*CLQKGAALRADSPS Trigger: AGATGGGCTATCGGCTCTGAGAGCTGCACCCTTCTGTAAACACCACACCGACTCCTCTCTCCTGCTGCCCTGCCCCAACCTATTTAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025794.7 ENSMUST00000189124.2 |
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| 3UTR GCA 90 bp | GCTTCTCTGTCTAAGCAGAAGGTTGGAAGGCTGCTGAGGGTGCTATaGTATGAGAAGGGGCTGGACCAGCCATCTACATGTCATGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: ASLSKQKVGRLLRVL*YEKGLDQPSTCHAW Trigger: CCAGGCATGACATGTAGATGGCTGGTCCAGCCCCTTCTCATAGCATAGCACCCTCAGCAGCCTTCCAACCTTCTGCTTAGACAGAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025794.7 ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR CCA 90 bp | AAACACACACCCAGTTCAGGGTTGAAGAGAGGGTGTCTTTGCCAGTaGGTGTCTGGCATAACCTCTCCTTGTGGTTGGAGCTCAGCCATT | + |
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Preference number: 1 (lower is better) Translates to: KHTPSSGLKRGCLCQ*VSGITSPCGWSSAI Trigger: AATGGCTGAGCTCCAACCACAAGGAGAGGTTATGCCAGACACCCACTGGCAAAGACACCCTCTCTTCAACCCTGAACTGGGTGTGTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR GCA 90 bp | GCACATGTGTGTGGTTTTCTACCATGTATCTGTGCACCACATGTATaGCTGATAACCCACAGAGGTCAGAGAGGGCATCAGATCCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: AHVCGFLPCICAPHV*LITHRGQRGHQIPW Trigger: CCAGGGGATCTGATGCCCTCTCTGACCTCTGTGGGTTATCAGGCATACATGTGGTGCACAGATACATGGTAGAAAACCACACACATGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR TCA 90 bp | ACCTGTAGTTCCAGTTCTTGGGAAGCTCAGGCAGGAGGATTGCCATaGGTTCCAGAACAGCCAAGATTACATACCAAGACCTTGCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: TCSSSSWEAQAGGLP*VPEQPRLHTKTLPQ Trigger: CTGAGGCAAGGTCTTGGTATGTAATCTTGGCTGTTCTGGAACTCATGGCAATCCTCCTGCCTGAGCTTCCCAAGAACTGGAACTACAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR GCA 90 bp | CTCACACCTGTAGTTCCAGTTCTTGGGAAGCTCAGGCAGGAGGATTaGCATGAGTTCCAGAACAGCCAAGATTACATACCAAGACCTTGC | + |
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Preference number: 1 (lower is better) Translates to: LTPVVPVLGKLRQED*HEFQNSQDYIPRPC Trigger: GCAAGGTCTTGGTATGTAATCTTGGCTGTTCTGGAACTCATGGCAATCCTCCTGCCTGAGCTTCCCAAGAACTGGAACTACAGGTGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR GCA 90 bp | TGTGTGTGTGTGTGCACATGTGTGTGGTTTTCTACCATGTATCTGTaGACCACATGTATGCCTGATAACCCACAGAGGTCAGAGAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: CVCVCTCVWFSTMYL*TTCMPDNPQRSERA Trigger: TGCCCTCTCTGACCTCTGTGGGTTATCAGGCATACATGTGGTGCACAGATACATGGTAGAAAACCACACACATGTGCACACACACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR TCA 90 bp | GCTCTGTCCTATGCCAGGCTGAGGAGACAAATATCCCAAAGTGGCTaGGACAGCAGAGCTGTGTTCTCTCATAACACTGAAGACACAAAT | + |
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Preference number: 1 (lower is better) Translates to: ALSYARLRRQISQSG*DSRAVFSHNTEDTN Trigger: ATTTGTGTCTTCAGTGTTATGAGAGAACACAGCTCTGCTGTCTCAGCCACTTTGGGATATTTGTCTCCTCAGCCTGGCATAGGACAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR TCA 90 bp | TGTGACAGGGAGAGCCTGCTCTCCAGGATAGGGAATCTCAGGGTCTaGGCTATGAGGACTCAAGATTTAATGAATTTTGACCTTATGAGG | + |
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Preference number: 1 (lower is better) Translates to: CDRESLLSRIGNLRV*AMRTQDLMNFDLMR Trigger: CCTCATAAGGTCAAAATTCATTAAATCTTGAGTCCTCATAGCTCAGACCCTGAGATTCCCTATCCTGGAGAGCAGGCTCTCCCTGTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
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| 3UTR CCA 90 bp | CCCAAAGATGACTTCCCACCCTCAGTTGCAAAGCTACACTGTGTGTaGGCTACAGGCTGTGTGAAACCTAACTCACTAGTGATACATTTT | + |
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Preference number: 1 (lower is better) Translates to: PKDDFPPSVAKLHCV*ATGCVKPNSLVIHF Trigger: AAAATGTATCACTAGTGAGTTAGGTTTCACACAGCCTGTAGCCCACACACAGTGTAGCTTTGCAACTGAGGGTGGGAAGTCATCTTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR TCA 90 bp | GGAGTTGTGAGCAACTGCTCTGTCTTTTGGGATCCTGTTACGATCTaGCAAAGTAAGTCCCCCTTAGTCACTAGATCTGCCCAAACTTAT | + |
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Preference number: 1 (lower is better) Translates to: GVVSNCSVFWDPVTI*QSKSPLVTRSAQTY Trigger: ATAAGTTTGGGCAGATCTAGTGACTAAGGGGGACTTACTTTGTCAGATCGTAACAGGATCCCAAAAGACAGAGCAGTTGCTCACAACTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025794.7 ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR GCA 90 bp | TCACACACACTTGACAAAATACAACTGAACTACATCCTCACCCTCTaGTTCTCTCTGAGGATGACACCTGTGACTGAAGTGAGCATTGAA | + |
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Preference number: 1 (lower is better) Translates to: SHTLDKIQLNYILTL*FSLRMTPVTEVSIE Trigger: TTCAATGCTCACTTCAGTCACAGGTGTCATCCTCAGAGAGAAGCAGAGGGTGAGGATGTAGTTCAGTTGTATTTTGTCAAGTGTGTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR TCA 90 bp | GAATCTCAGGGTCTGAGCTATGAGGACTCAAGATTTAATGAATTTTaGCCTTATGAGGTATGGGACAATAGAGGGTTTGAGTCCTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: ESQGLSYEDSRFNEF*PYEVWDNRGFESWD Trigger: GTCCCAGGACTCAAACCCTCTATTGTCCCATACCTCATAAGGTCAAAATTCATTAAATCTTGAGTCCTCATAGCTCAGACCCTGAGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
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| 3UTR GCA 90 bp | TATTTGGAATTGAGGAGTCACAGACCAAGAAACACAGTGAGGAGATaGCTACCACCAAAAGCTAGAACTCAGTTGAGGACTCAGACTTTA | + |
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Preference number: 1 (lower is better) Translates to: YLELRSHRPRNTVRR*LPPKARTQLRTQTL Trigger: TAAAGTCTGAGTCCTCAACTGAGTTCTAGCTTTTGGTGGTAGGCATCTCCTCACTGTGTTTCTTGGTCTGTGACTCCTCAATTCCAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
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| 3UTR CCA 90 bp | CTGGCAGTTGTGGAGGAGACTTTGCAGGCAGGGGGATTGCTTCAATaGGGGAAATTATTTATTTCCTATTTACATGTGAGATCTAGTCAA | + |
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Preference number: 1 (lower is better) Translates to: LAVVEETLQAGGLLQ*GKLFISYLHVRSSQ Trigger: TTGACTAGATCTCACATGTAAATAGGAAATAAATAATTTCCCCCATTGAAGCAATCCCCCTGCCTGCAAAGTCTCCTCCACAACTGCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR-3UTR TCA 90 bp | CACTGTCCCTCACTGGTGACCAGACCCTATGCCCCACCCCTCCCTGACCCAGGCTGGCAGCAGCAGTCATaGCGATCTTGCCTACCCGAG | + |
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Preference number: 2 (lower is better) Translates to: HCPSLVTRPYAPPLPDPGWQQQS*RSCLPE Trigger: CTCGGGTAGGCAAGATCGTCATGACTGCTGCTGCCA...GCCTGGGTCAGGGAGGGGTGGGGCATAGGGTCTGGTCACCAGTGAGGGACAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
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| 3UTR-3UTR GCA 90 bp | TCCACTAACACTGTGGGGGCTGCAGACTCAGGAATAGACTCAGCCTCTCCACAGCCCAGGTGGGCTGTGTaGCAGGGTCAGGGACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: STNTVGAADSGIDSASPQPRWAV*QGQGQE Trigger: CTCCTGTCCCTGACCCTGGCACACAGCCCACCTGGG...CTGTGGAGAGGCTGAGTCTATTCCTGAGTCTGCAGCCCCCACAGTGTTAGTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGTCCCTCACTGGTGACCAGACCCTATGCCCCACCCCTCCCTGACCCAGGCATGCCATGTGGGTGCTaGGAACTGAATGGAGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: HCPSLVTRPYAPPLPDPGMPCGC*ELNGGS Trigger: AGAACCTCCATTCAGTTCCCAGCACCCACATGGCAT...GCCTGGGTCAGGGAGGGGTGGGGCATAGGGTCTGGTCACCAGTGAGGGACAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTACAAAGCTCTGGCCCACGAATCTTTGCTAGTGTCAGAGCTCAGTGTCCATCTGAGGCCTGTCCCCTaGGCCTGTGGGGGAGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: QYKALAHESLLVSELSVHLRPVP*ACGGGA Trigger: GGCTCCTCCCCCACAGGCTCAGGGGACAGGCCTCAG...ATGGACACTGAGCTCTGACACTAGCAAAGATTCGTGGGCCAGAGCTTTGTACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR-3UTR GCA 90 bp | AACGGGGGCAGGGACACAGGATGGCTTACACGGGGTGGCCTTCCCGAGAGCATCCTTCCCACCCTCAGTTaGAAAGCTACACTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: NGGRDTGWLTRGGLPESILPTLS*KATLCV Trigger: CACACACAGTGTAGCTTTGCAACTGAGGGTGGGAAG...GATGCTCTCGGGAAGGCCACCCCGTGTAAGCCATCCTGTGTCCCTGCCCCCGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGGGGAGGAGCCACCTGCCTCTTCCAGCTCCGGGTGTCTGGTTTGTAGTCTCATGTCACTTCAGGTaGGACAAAGCCACCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LWGRSHLPLPAPGVWFVVSCHFR*DKATLQ Trigger: CTGGAGGGTGGCTTTGTCCCACCTGAAGTGACATGA...GACTACAAACCAGACACCCGGAGCTGGAAGAGGCAGGTGGCTCCTCCCCCACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGTCCCTCACTGGTGACCAGACCCTATGCCCCACCCCTCCCTGACCCAGGCCTTTCTCCTTTCTCCTaGCCTCACACACACTTGACA | + |
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Preference number: 2 (lower is better) Translates to: HCPSLVTRPYAPPLPDPGLSPFS*PHTHLT Trigger: TGTCAAGTGTGTGTGAGGCCAGGAGAAAGGAGAAAG...GCCTGGGTCAGGGAGGGGTGGGGCATAGGGTCTGGTCACCAGTGAGGGACAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR-3UTR CCA 90 bp | GTACCCTGCTCTGTCCTATGCCAGGCTGAGGAGACAAATATCCCAAAGTGGCTGTGTCCCCTGAGCCTGTaGGGGAGGAGCCACCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: VPCSVLCQAEETNIPKWLCPLSL*GRSHLP Trigger: AGGCAGGTGGCTCCTCCCCCACAGGCTCAGGGGACA...CAGCCACTTTGGGATATTTGTCTCCTCAGCCTGGCATAGGACAGAGCAGGGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGGGGAGGAGCCACCTGCCTCTTCCAGCTCCGGGTGTCTGGTTTGTAGTCCAGCCCAGCAATCCCTaGAGCCTCTTGAAATGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LWGRSHLPLPAPGVWFVVQPSNP*SLLKCF Trigger: GAAGCATTTCAAGAGGCTCCAGGGATTGCTGGGCTG...GACTACAAACCAGACACCCGGAGCTGGAAGAGGCAGGTGGCTCCTCCCCCACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
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| 3UTR-3UTR CCA 90 bp | GCGGCACTGGAGGCTCCCAGTGTTTCTGTACCTCACCGAGTACCTCCTAGGGTCTCATGTCACTTCAGGTaGGACAAAGCCACCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: AALEAPSVSVPHRVPPRVSCHFR*DKATLQ Trigger: CTGGAGGGTGGCTTTGTCCCACCTGAAGTGACATGA...GACCCTAGGAGGTACTCGGTGAGGTACAGAAACACTGGGAGCCTCCAGTGCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGTCCCTCACTGGTGACCAGACCCTATGCCCCACCCCTCCCTGACCCAGGCCCAAATAATCTGATCTaGGTCCATGGTCATGTCACT | + |
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Preference number: 2 (lower is better) Translates to: HCPSLVTRPYAPPLPDPGPNNLI*VHGHVT Trigger: AGTGACATGACCATGGACCCAGATCAGATTATTTGG...GCCTGGGTCAGGGAGGGGTGGGGCATAGGGTCTGGTCACCAGTGAGGGACAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTTTCTGTACCTCACCGAGTACCTCCTAGGGTCTAAGAAGCAGGAGACAGAGTTCTGGCTGTGTGTCTaGGGCTGCGGCACTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: VFLYLTEYLLGSKKQETEFWLCV*GCGTGG Trigger: GCCTCCAGTGCCGCAGCCCCAGACACACAGCCAGAA...CTCTGTCTCCTGCTTCTTAGACCCTAGGAGGTACTCGGTGAGGTACAGAAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR-3UTR CCA 90 bp | GTACCCTGCTCTGTCCTATGCCAGGCTGAGGAGACAAATATCCCAAAGTGGCTGTCTCCCTCATCACTCTaGCCACCGATGGCCACACGG | + |
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Preference number: 2 (lower is better) Translates to: VPCSVLCQAEETNIPKWLSPSSL*PPMATR Trigger: CCGTGTGGCCATCGGTGGCCAGAGTGATGAGGGAGA...CAGCCACTTTGGGATATTTGTCTCCTCAGCCTGGCATAGGACAGAGCAGGGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
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| 3UTR CAA 90 bp | TCACAGGCTGGACTAGGCACTCGCCTTTCAGGAACCACTGGGGACTaGGAAGCAGATGAAAGCTTAAATAGGTTGGGGCAGGGCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SQAGLGTRLSGTTGD*EADESLNRLGQGSR Trigger: CCTGCTGCCCTGCCCCAACCTATTTAAGCTTTCATCTGCTTCCAAGTCCCCAGTGGTTCCTGAAAGGCGAGTGCCTAGTCCAGCCTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025794.7 ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR-3UTR TCA 90 bp | ATGACTTCCCACCCTCAGTTGCAAAGCTACACTGTGTGTGGGCTACAGGCTGTGAGGTCTGCAGGTTCTTaGGGGCCAGGTCCACCTCAT | + |
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Preference number: 2 (lower is better) Translates to: MTSHPQLQSYTVCGLQAVRSAGS*GPGPPH Trigger: ATGAGGTGGACCTGGCCCTCAAGAACCTGCAGACCT...CACAGCCTGTAGCCCACACACAGTGTAGCTTTGCAACTGAGGGTGGGAAGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGCACATGTGTGTGGTTTTCTACCATGTATCTGTGCACCCTGTGTGTCTGGGGCTaGGGCACTGGAGGCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCTCVWFSTMYLCTLCVWG*GTGGSQ Trigger: CTGGGAGCCTCCAGTGCCGCAGCCCCAGACACACAG...GGTGCACAGATACATGGTAGAAAACCACACACATGTGCACACACACACACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGCGGCACTGGAGGCTCCCAGTGTTTCTGTACCTCACCGAGTACCTCCTAGGTTAGGTCCAGAAAGGTaGCTCCAGTATGAAGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: AAALEAPSVSVPHRVPPRLGPER*LQYEGS Trigger: AGACCCTTCATACTGGAGGCACCTTTCTGGACCTAA...CCTAGGAGGTACTCGGTGAGGTACAGAAACACTGGGAGCCTCCAGTGCCGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCTATGCTATGAGAAGGGGCTGGACCAGCCATCTACATGTCATGCCTGGCTAGGGGTGTTCACAGGCTaGACTAGGCACTCGCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: VLCYEKGLDQPSTCHAWLGVFTG*TRHSPF Trigger: GAAAGGCGAGTGCCTAGTCCAGCCTGTGAACACCCC...TAGCCAGGCATGACATGTAGATGGCTGGTCCAGCCCCTTCTCATAGCATAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025794.7 ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTCAGCCATTAGGAGCCACAGCACAGTACAAAGCTCTGGCCCACGAATCTGCTATGAGAAGGGGCTaGACCAGCCATCTACATGTC | + |
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Preference number: 2 (lower is better) Translates to: GAQPLGATAQYKALAHESAMRRG*TSHLHV Trigger: GACATGTAGATGGCTGGTCCAGCCCCTTCTCATAGC...AGATTCGTGGGCCAGAGCTTTGTACTGTGCTGTGGCTCCTAATGGCTGAGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCCACAGCACAGTACAAAGCTCTGGCCCACGAATCTTTGCTAGTGTCAGAAGAGCTCAGTGTCCATaGGCCCAGGAAGGGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: RSHSTVQSSGPRIFASVRRAQCP*AQEGST Trigger: TGTGCTCCCTTCCTGGGCCCATGGACACTGAGCTCT...TCTGACACTAGCAAAGATTCGTGGGCCAGAGCTTTGTACTGTGCTGTGGCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR-3UTR CCA 90 bp | TGCGTGTGTGTGTGTGTGTGCACATGTGTGTGGTTTTCTACCATGTATCTGTGCTTCTGGCTGTGTGTCTaGGGCTGCGGCACTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVCTCVWFSTMYLCFWLCV*GCGTGG Trigger: GCCTCCAGTGCCGCAGCCCCAGACACACAGCCAGAA...GCACAGATACATGGTAGAAAACCACACACATGTGCACACACACACACACACGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGCACATGTGTGTGGTTTTCTACCATGTATCTGTGCACCACTGTCCCTCACTGGTaGCCAGACCCTATGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCTCVWFSTMYLCTTVPHW*PDPMPH Trigger: GTGGGGCATAGGGTCTGGTCACCAGTGAGGGACAGT...GGTGCACAGATACATGGTAGAAAACCACACACATGTGCACACACACACACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR-3UTR TCA 90 bp | TGCGTGTGTGTGTGTGTGTGCACATGTGTGTGGTTTTCTACCATGTATCTGTGCACTGTCCCTCACTGGTaGCCAGACCCTATGCCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: CVCVCVCTCVWFSTMYLCTVPHW*PDPMPH Trigger: GTGGGGCATAGGGTCTGGTCACCAGTGAGGGACAGT...GCACAGATACATGGTAGAAAACCACACACATGTGCACACACACACACACACGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGTTTCTGTACCTCACCGAGTACCTCCTAGGGTCTAAGAAGCAGGAGACAGAGGTGGGTGCTGGGAACTaGATGGAGGTTCTGAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VFLYLTEYLLGSKKQETEVGAGN*MEVLRK Trigger: CTTCCTCAGAACCTCCATTCAGTTCCCAGCACCCAC...CTCTGTCTCCTGCTTCTTAGACCCTAGGAGGTACTCGGTGAGGTACAGAAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGTACAAAGCTCTGGCCCACGAATCTTTGCTAGTGTCAGAGCTCAGTGTCCATGGGGTGTTCACAGGCTaGACTAGGCACTCGCCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: QYKALAHESLLVSELSVHGVFTG*TRHSPF Trigger: GAAAGGCGAGTGCCTAGTCCAGCCTGTGAACACCCC...ATGGACACTGAGCTCTGACACTAGCAAAGATTCGTGGGCCAGAGCTTTGTACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGAGCCACAGCACAGTACAAAGCTCTGGCCCACGAATCTTTGCTAGTGTCAGATGTCAAAGGAGAACTTaGCGTGGTACCTGCCCATCC | + |
|
Preference number: 2 (lower is better) Translates to: RSHSTVQSSGPRIFASVRCQRRT*RGTCPS Trigger: GGATGGGCAGGTACCACGGCAAGTTCTCCTTTGACA...TCTGACACTAGCAAAGATTCGTGGGCCAGAGCTTTGTACTGTGCTGTGGCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR-3UTR CCA 90 bp | GTACCCTGCTCTGTCCTATGCCAGGCTGAGGAGACAAATATCCCAAAGTGGCTGTGTAGTTCCAGTTCTTaGGAAGCTCAGGCAGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: VPCSVLCQAEETNIPKWLCSSSS*EAQAGG Trigger: TCCTCCTGCCTGAGCTTCCCAAGAACTGGAACTACA...CAGCCACTTTGGGATATTTGTCTCCTCAGCCTGGCATAGGACAGAGCAGGGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGAGCCACAGCACAGTACAAAGCTCTGGCCCACGAATCTTTGCTAGTGTCAGAGACCAAGAAACACAGTaGGGAGATGCCTACCACCAA | + |
|
Preference number: 2 (lower is better) Translates to: RSHSTVQSSGPRIFASVRDQETQ*GDAYHQ Trigger: TTGGTGGTAGGCATCTCCTCACTGTGTTTCTTGGTC...TCTGACACTAGCAAAGATTCGTGGGCCAGAGCTTTGTACTGTGCTGTGGCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR-3UTR GCA 90 bp | GTACCCTGCTCTGTCCTATGCCAGGCTGAGGAGACAAATATCCCAAAGTGGCTGTGCAGGCAGGGGGATTaGTTCAATGGGGGAAATTAT | + |
|
Preference number: 2 (lower is better) Translates to: VPCSVLCQAEETNIPKWLCRQGD*FNGGNY Trigger: ATAATTTCCCCCATTGAAGCAATCCCCCTGCCTGCA...CAGCCACTTTGGGATATTTGTCTCCTCAGCCTGGCATAGGACAGAGCAGGGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGACTTCCCACCCTCAGTTGCAAAGCTACACTGTGTGTGGGCTACAGGCTGTGAGGATAATTCCAGGGTaGAATGATAAGCACCAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: MTSHPQLQSYTVCGLQAVRIIPG*NDKHQA Trigger: GGCCTGGTGCTTATCATTGCACCCTGGAATTATCCT...CACAGCCTGTAGCCCACACACAGTGTAGCTTTGCAACTGAGGGTGGGAAGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGAGCCACAGCACAGTACAAAGCTCTGGCCCACGAATCTTTGCTAGTGTCAGAATAGATAGTGTGACATaGCATGTGGGTGCTGGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: RSHSTVQSSGPRIFASVRIDSVT*HVGAGN Trigger: GTTCCCAGCACCCACATGGCATGTCACACTATCTAT...TCTGACACTAGCAAAGATTCGTGGGCCAGAGCTTTGTACTGTGCTGTGGCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CCA 90 bp | CCATATCACCTTTCTCCTTTCTCCTGGCCTCACACACACTTGACAAAATACAACGGGGTGTTCACAGGCTaGACTAGGCACTCGCCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: PYHLSPFSWPHTHLTKYNGVFTG*TRHSPF Trigger: GAAAGGCGAGTGCCTAGTCCAGCCTGTGAACACCCC...GTTGTATTTTGTCAAGTGTGTGTGAGGCCAGGAGAAAGGAGAAAGGTGATATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CCA 90 bp | CCATATCACCTTTCTCCTTTCTCCTGGCCTCACACACACTTGACAAAATACAACAGAGCTCAGTGTCCATaGGCCCAGGAAGGGAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: PYHLSPFSWPHTHLTKYNRAQCP*AQEGST Trigger: TGTGCTCCCTTCCTGGGCCCATGGACACTGAGCTCT...GTTGTATTTTGTCAAGTGTGTGTGAGGCCAGGAGAAAGGAGAAAGGTGATATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR TCA 90 bp | CCATATCACCTTTCTCCTTTCTCCTGGCCTCACACACACTTGACAAAATACAACCACCCAGTTCAGGGTTaGAGAGAGGGTGTCTTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: PYHLSPFSWPHTHLTKYNHPVQG*REGVFA Trigger: GGCAAAGACACCCTCTCTTCAACCCTGAACTGGGTG...GTTGTATTTTGTCAAGTGTGTGTGAGGCCAGGAGAAAGGAGAAAGGTGATATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGAGGATGACACCTGTGACTGAAGTGAGCATTGAATGGATTGCCAGGATCTTGCCTCTGACCATGAGCTaGAAGAGAATCCTTCCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LRMTPVTEVSIEWIARILPLTMS*KRILPS Trigger: AGAGGGAAGGATTCTCTTGCAGCTCATGGTCAGAGG...CAAGATCCTGGCAATCCATTCAATGCTCACTTCAGTCACAGGTGTCATCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGAGGATGACACCTGTGACTGAAGTGAGCATTGAATGGATTGCCAGGATCTTGAGAGAGGAGTCGGTGTaGTGTTTACAGAAGGGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LRMTPVTEVSIEWIARILREESV*CLQKGA Trigger: TGCACCCTTCTGTAAACACCACACCGACTCCTCTCT...CAAGATCCTGGCAATCCATTCAATGCTCACTTCAGTCACAGGTGTCATCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTGCGTGTGTGTGTGTGTGTGCACATGTGTGTGGTTTTCTACCATGTATCTACACTCTCTTGGGAGTaGGAAGACAGCTCACAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: CVRVCVCVHMCVVFYHVSTLSWE*EDSSQL Trigger: AAGCTGTGAGCTGTCTTCTCACTCCCAAGAGAGTGT...AGATACATGGTAGAAAACCACACACATGTGCACACACACACACACACGCACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTGCGTGTGTGTGTGTGTGTGCACATGTGTGTGGTTTTCTACCATGTATCTACAGGGTCATGTACATaGAGCCATCGTTCCCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: CVRVCVCVHMCVVFYHVSTGSCT*SHRSHR Trigger: TCTGTGGGAACGATGGCTTCATGTACATGACCCTGT...AGATACATGGTAGAAAACCACACACATGTGCACACACACACACACACGCACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTGCGTGTGTGTGTGTGTGTGCACATGTGTGTGGTTTTCTACCATGTATCTCCTCTGACCATGAGCTaGAAGAGAATCCTTCCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: CVRVCVCVHMCVVFYHVSPLTMS*KRILPS Trigger: AGAGGGAAGGATTCTCTTGCAGCTCATGGTCAGAGG...AGATACATGGTAGAAAACCACACACATGTGCACACACACACACACACGCACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTGTGTTTACATAACCTTTGTCTTAAGACACATCACCCCATATCACCTTTCTGGCAGGGACACAGGATaGCTTACACGGGGTGGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: SCVYITFVLRHITPYHLSGRDTG*LTRGGL Trigger: AAGGCCACCCCGTGTAAGCCATCCTGTGTCCCTGCC...AGAAAGGTGATATGGGGTGATGTGTCTTAAGACAAAGGTTATGTAAACACAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CCA 90 bp | CCATATCACCTTTCTCCTTTCTCCTGGCCTCACACACACTTGACAAAATACAACAGCGGCTTTTCCCGCTaGTTCATGAACTCGATGGCT | + |
|
Preference number: 2 (lower is better) Translates to: PYHLSPFSWPHTHLTKYNSGFSR*FMNSMA Trigger: AGCCATCGAGTTCATGAACCAGCGGGAAAAGCCGCT...GTTGTATTTTGTCAAGTGTGTGTGAGGCCAGGAGAAAGGAGAAAGGTGATATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCGTGTGTGTGTGTGTGTGCACATGTGTGTGGTTTTCTACCATGTATCTGTGCCCCCCACTAAAGGTATaGTCATCAAGTTCACAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: CVCVCVCTCVWFSTMYLCPPLKV*SSSSQD Trigger: ATCCTGTGAACTTGATGATCATACCTTTAGTGGGGG...GCACAGATACATGGTAGAAAACCACACACATGTGCACACACACACACACACGCA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTGTGTTTACATAACCTTTGTCTTAAGACACATCACCCCATATCACCTTTCTAAGGTGCCTCCAGTATaGAGGGTCTCAGCCCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: SCVYITFVLRHITPYHLSKVPPV*RVSAQV Trigger: CACCTGGGCTGAGACCCTTCATACTGGAGGCACCTT...AGAAAGGTGATATGGGGTGATGTGTCTTAAGACAAAGGTTATGTAAACACAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCGTGTGTGTGTGTGTGTGCACATGTGTGTGGTTTTCTACCATGTATCTGTGCTCTACATGTCATGCCTaGCTACAGGTAGCTCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: CVCVCVCTCVWFSTMYLCSTCHA*LQVAQK Trigger: TTTCTGAGCTACCTGTAGCCAGGCATGACATGTAGA...GCACAGATACATGGTAGAAAACCACACACATGTGCACACACACACACACACGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGTACAAAGCTCTGGCCCACGAATCTTTGCTAGTGTCAGAGCTCAGTGTCCATCCAAATAATCTGATCTaGGTCCATGGTCATGTCACT | + |
|
Preference number: 2 (lower is better) Translates to: QYKALAHESLLVSELSVHPNNLI*VHGHVT Trigger: AGTGACATGACCATGGACCCAGATCAGATTATTTGG...ATGGACACTGAGCTCTGACACTAGCAAAGATTCGTGGGCCAGAGCTTTGTACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGCACATGTGTGTGGTTTTCTACCATGTATCTGTGCACCACAGCTATTTGGAATTaGGGAGTCACAGACCAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: VCVCVCTCVWFSTMYLCTTAIWN*GVTDQE Trigger: TTCTTGGTCTGTGACTCCTCAATTCCAAATAGCTGT...GGTGCACAGATACATGGTAGAAAACCACACACATGTGCACACACACACACACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR CAA 90 bp | CTGACTGAATCCTCTGACCATGAGCTGCAAGAGAATCCTTCCCTCTaGAACTTGTCCGTATCAGGACATTTAATAGAAGTCACAGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LTESSDHELQENPSL*NLSVSGHLIEVTGK Trigger: CTTTCCTGTGACTTCTATTAAATGTCCTGATACGGACAAGTTCAAGAGGGAAGGATTCTCTTGCAGCTCATGGTCAGAGGATTCAGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCTGTGTTTACATAACCTTTGTCTTAAGACACATCACCCCATATCACCTTTCTTTGTGGAGGAGACTTTaGAGGCAGGGGGATTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SCVYITFVLRHITPYHLSLWRRL*RQGDCF Trigger: GAAGCAATCCCCCTGCCTGCAAAGTCTCCTCCACAA...AGAAAGGTGATATGGGGTGATGTGTCTTAAGACAAAGGTTATGTAAACACAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR CAA 90 bp | GAATCCTCTGACCATGAGCTGCAAGAGAATCCTTCCCTCTTGAACTaGTCCGTATCAGGACATTTAATAGAAGTCACAGGAAAGCAACTA | + |
|
Preference number: 2 (lower is better) Translates to: ESSDHELQENPSLLN*SVSGHLIEVTGKQL Trigger: TAGTTGCTTTCCTGTGACTTCTATTAAATGTCCTGATACGGACAAGTTCAAGAGGGAAGGATTCTCTTGCAGCTCATGGTCAGAGGATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCACCTCTCCAGTCTCCTCCTGTGTTTACATAACCTTTGTCTTAAGACACATCTGGAGCCTCTTGAAATaGTTCTGGTTGATGATTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LTSPVSSCVYITFVLRHIWSLLK*FWLMIL Trigger: CAGAATCATCAACCAGAAGCATTTCAAGAGGCTCCA...GATGTGTCTTAAGACAAAGGTTATGTAAACACAGGAGGAGACTGGAGAGGTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTGTGTTTACATAACCTTTGTCTTAAGACACATCACCCCATATCACCTTTCTGGGGGATTGCTTCAATaGGGGAAATTATTTATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SCVYITFVLRHITPYHLSGGLLQ*GKLFIS Trigger: GGAAATAAATAATTTCCCCCATTGAAGCAATCCCCC...AGAAAGGTGATATGGGGTGATGTGTCTTAAGACAAAGGTTATGTAAACACAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR CCA 72 bp | AGGGAGCACAGTAGGAACGGGGGCAGGGACACAGGATaGCTTACACGGGGTGGCCTTCCCGAGAGCATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: REHSRNGGRDTG*LTRGGLPESIR Trigger: CCTGATGCTCTCGGGAAGGCCACCCCGTGTAAGCCATCCTGTGTCCCTGCCCCCGTTCCTACTGTGCTCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CAA 90 bp | CACTGTCCCTCACTGGTGACCAGACCCTATGCCCCACCCCTCCCTGACCCAGGCGTTGTGGAGGAGACTTaGCAGGCAGGGGGATTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HCPSLVTRPYAPPLPDPGVVEET*QAGGLL Trigger: AAGCAATCCCCCTGCCTGCAAAGTCTCCTCCACAAC...GCCTGGGTCAGGGAGGGGTGGGGCATAGGGTCTGGTCACCAGTGAGGGACAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR TCA 72 bp | CTCACTGGTGACCAGACCCTATGCCCCACCCCTCCCTaGCCCAGGCATCAAACACACACCCAGTTCAGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LTGDQTLCPTPP*PRHQTHTQFRV Trigger: AACCCTGAACTGGGTGTGTGTTTGATGCCTGGGTCAGGGAGGGGTGGGGCATAGGGTCTGGTCACCAGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR TCA 72 bp | CTCTCCACAGGCAGGACTTGCAGAGGGATCGGGCTGTaGCAGGGAGAGCCTGCTCTCCAGGATAGGGAATCT | + |
|
Preference number: 3 (lower is better) Translates to: LSTGRTCRGIGL*QGEPALQDRES Trigger: AGATTCCCTATCCTGGAGAGCAGGCTCTCCCTGTCACAGCCCGATCCCTCTGCAAGTCCTGCCTGTGGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR CCA 72 bp | TCACAGCTTCTGGCTGTGTGTCTGGGGCTGCGGCACTaGAGGCTCCCAGTGTTTCTGTACCTCACCGAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: SQLLAVCLGLRH*RLPVFLYLTEY Trigger: GTACTCGGTGAGGTACAGAAACACTGGGAGCCTCCAGTGCCGCAGCCCCAGACACACAGCCAGAAGCTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGGGGGAGGAGCCACCTGCCTCTTCCAGCTCCGGGTGTCTGGTTTGTAGTCACTTCCCACCCTCAGTaGCAAAGCTACACTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LWGRSHLPLPAPGVWFVVTSHPQ*QSYTVC Trigger: ACACACAGTGTAGCTTTGCAACTGAGGGTGGGAAGT...GACTACAAACCAGACACCCGGAGCTGGAAGAGGCAGGTGGCTCCTCCCCCACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR TCA 72 bp | CTCCTCCAAAAGGAAGGCTGGACAGGGTCATGTACATaGAGCCATCGTTCCCACAGAAGCCCCCGCTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLQKEGWTGSCT*SHRSHRSPRCW Trigger: CCAGCAGCGGGGGCTTCTGTGGGAACGATGGCTTCATGTACATGACCCTGTCCAGCCTTCCTTTTGGAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR GCA 72 bp | TACCTCCTAGGGTCTAAGAAGCAGGAGACAGAGCCCTaGCACTGTCCCTCACTGGTGACCAGACCCTATGCC | + |
|
Preference number: 3 (lower is better) Translates to: YLLGSKKQETEP*HCPSLVTRPYA Trigger: GGCATAGGGTCTGGTCACCAGTGAGGGACAGTGGCAGGGCTCTGTCTCCTGCTTCTTAGACCCTAGGAGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR CCA 72 bp | CCACGAATCTTTGCTAGTGTCAGAGCTCAGTGTCCATaGGCCCAGGAAGGGAGCACAGTAGGAACGGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PRIFASVRAQCP*AQEGSTVGTGA Trigger: TGCCCCCGTTCCTACTGTGCTCCCTTCCTGGGCCCATGGACACTGAGCTCTGACACTAGCAAAGATTCGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAGCCACCTGCCTCTTCCAGCTCCGGGTGTCTGGTTTGTAGTCTCACCTCTGAAAGCTTAAATAGGTaGGGGCAGGGCAGCAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: EEPPASSSSGCLVCSLTSESLNR*GQGSRR Trigger: TCTCCTGCTGCCCTGCCCCAACCTATTTAAGCTTTC...AGAGGTGAGACTACAAACCAGACACCCGGAGCTGGAAGAGGCAGGTGGCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR TCA 72 bp | GGGCTTCTCTGTCTAAGCAGAAGGTTGGAAGGCTGCTaGGGGTGCTATGCTATGAGAAGGGGCTGGACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GLLCLSRRLEGC*GCYAMRRGWTS Trigger: GCTGGTCCAGCCCCTTCTCATAGCATAGCACCCTCAGCAGCCTTCCAACCTTCTGCTTAGACAGAGAAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025794.7 ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR TCA 72 bp | GCAGAAGGTTGGAAGGCTGCTGAGGGTGCTATGCTATaGGAAGGGGCTGGACCAGCCATCTACATGTCATGC | + |
|
Preference number: 3 (lower is better) Translates to: AEGWKAAEGAML*EGAGPAIYMSC Trigger: GCATGACATGTAGATGGCTGGTCCAGCCCCTTCTCATAGCATAGCACCCTCAGCAGCCTTCCAACCTTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025794.7 ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR TCA 72 bp | GTGGCCTTCCCGAGAGCATCAGGTGGGTCCCAAAGATaGCTTCCCACCCTCAGTTGCAAAGCTACACTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: VAFPRASGGSQR*LPTLSCKATLC Trigger: ACACAGTGTAGCTTTGCAACTGAGGGTGGGAAGTCATCTTTGGGACCCACCTGATGCTCTCGGGAAGGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR TCA 72 bp | GGAGCTTCCTGTACCCTGCTCTGTCCTATGCCAGGCTaGGGAGACAAATATCCCAAAGTGGCTGAGACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GASCTLLCPMPG*GDKYPKVAETA Trigger: TGCTGTCTCAGCCACTTTGGGATATTTGTCTCCTCAGCCTGGCATAGGACAGAGCAGGGTACAGGAAGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR GCA 72 bp | ACCACTAGGGAGCTTCCTGTACCCTGCTCTGTCCTATaGCAGGCTGAGGAGACAAATATCCCAAAGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TTRELPVPCSVL*QAEETNIPKWL Trigger: CAGCCACTTTGGGATATTTGTCTCCTCAGCCTGGCATAGGACAGAGCAGGGTACAGGAAGCTCCCTAGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR CCA 72 bp | AGGGTTGAAGAGAGGGTGTCTTTGCCAGTGGGTGTCTaGCATAACCTCTCCTTGTGGTTGGAGCTCAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RVEERVSLPVGV*HNLSLWLELSH Trigger: ATGGCTGAGCTCCAACCACAAGGAGAGGTTATGCCAGACACCCACTGGCAAAGACACCCTCTCTTCAACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCTCAGCCATTAGGAGCCACAGCACAGTACAAAGCTCTGGCCCACGAATCTGGAACCACTGGGGACTaGGAAGCAGATGAAAGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: GAQPLGATAQYKALAHESGTTGD*EADESL Trigger: TAAGCTTTCATCTGCTTCCAAGTCCCCAGTGGTTCC...AGATTCGTGGGCCAGAGCTTTGTACTGTGCTGTGGCTCCTAATGGCTGAGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGCCACAGCACAGTACAAAGCTCTGGCCCACGAATCTTTGCTAGTGTCAGAGTTGTGGAGGAGACTTaGCAGGCAGGGGGATTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: RSHSTVQSSGPRIFASVRVVEET*QAGGLL Trigger: AAGCAATCCCCCTGCCTGCAAAGTCTCCTCCACAAC...TCTGACACTAGCAAAGATTCGTGGGCCAGAGCTTTGTACTGTGCTGTGGCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAATCCTCTGACCATGAGCTGCAAGAGAATCCTTCCCTCTTGAACTTGTCCCAGGTCTGCAGGTTCTaGAGGGCCAGGTCCACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TESSDHELQENPSLLNLSQVCRF*RARSTS Trigger: TGAGGTGGACCTGGCCCTCAAGAACCTGCAGACCTG...GGACAAGTTCAAGAGGGAAGGATTCTCTTGCAGCTCATGGTCAGAGGATTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR TCA 72 bp | CACACAGTCATGACCCTGAGAGCAATGGGCAGAGTGTaGAATCAAACCACTAGGGAGCTTCCTGTACCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: HTVMTLRAMGRV*NQTTRELPVPC Trigger: GCAGGGTACAGGAAGCTCCCTAGTGGTTTGATTTCACACTCTGCCCATTGCTCTCAGGGTCATGACTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR GCA 72 bp | TCTAAGCAGAAGGTTGGAAGGCTGCTGAGGGTGCTATaGTATGAGAAGGGGCTGGACCAGCCATCTACATGT | + |
|
Preference number: 3 (lower is better) Translates to: SKQKVGRLLRVL*YEKGLDQPSTC Trigger: ACATGTAGATGGCTGGTCCAGCCCCTTCTCATAGCATAGCACCCTCAGCAGCCTTCCAACCTTCTGCTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025794.7 ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTATGCTATGAGAAGGGGCTGGACCAGCCATCTACATGTCATGCCTGGCTAGGAACCACTGGGGACTaGGAAGCAGATGAAAGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: VLCYEKGLDQPSTCHAWLGTTGD*EADESL Trigger: TAAGCTTTCATCTGCTTCCAAGTCCCCAGTGGTTCC...TAGCCAGGCATGACATGTAGATGGCTGGTCCAGCCCCTTCTCATAGCATAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025794.7 ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACTTATTGAGGGGGCTTCTCTGTCTAAGCAGAAGGTTGGAAGGCTGCTGAGGGAAAGCTTAAATAGGTaGGGGCAGGGCAGCAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KLIEGASLSKQKVGRLLRESLNR*GQGSRR Trigger: TCTCCTGCTGCCCTGCCCCAACCTATTTAAGCTTTC...CCTCAGCAGCCTTCCAACCTTCTGCTTAGACAGAGAAGCCCCCTCAATAAGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025794.7 ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGGATGACACCTGTGACTGAAGTGAGCATTGAATGGATTGCCAGGATCTTGGCAGTCATGACGATCTaGCCTACCCGAGGACTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LRMTPVTEVSIEWIARILAVMTI*PTRGLP Trigger: AGGAAGTCCTCGGGTAGGCAAGATCGTCATGACTGC...CAAGATCCTGGCAATCCATTCAATGCTCACTTCAGTCACAGGTGTCATCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR TCA 72 bp | ATAGATAGTGTGACATGCCATGTGGGTGCTGGGAACTaGATGGAGGTTCTGAGGAAGAGCAGCCAGTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: IDSVTCHVGAGN*MEVLRKSSQCC Trigger: ACAGCACTGGCTGCTCTTCCTCAGAACCTCCATTCAGTTCCCAGCACCCACATGGCATGTCACACTATCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR CCA 72 bp | GACTTCCCACCCTCAGTTGCAAAGCTACACTGTGTGTaGGCTACAGGCTGTGTGAAACCTAACTCACTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: DFPPSVAKLHCV*ATGCVKPNSLV Trigger: CACTAGTGAGTTAGGTTTCACACAGCCTGTAGCCCACACACAGTGTAGCTTTGCAACTGAGGGTGGGAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR GCA 72 bp | TGTGGTTTTCTACCATGTATCTGTGCACCACATGTATaGCTGATAACCCACAGAGGTCAGAGAGGGCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: CGFLPCICAPHV*LITHRGQRGHQ Trigger: CTGATGCCCTCTCTGACCTCTGTGGGTTATCAGGCATACATGTGGTGCACAGATACATGGTAGAAAACCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGCACATGTGTGTGGTTTTCTACCATGTATCTGTGCACCTTGAAATGCTTCTGGTaGATGATTCTGCCCAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVCTCVWFSTMYLCTLKCFW*MILPRL Trigger: CAACCTGGGCAGAATCATCAACCAGAAGCATTTCAA...GGTGCACAGATACATGGTAGAAAACCACACACATGTGCACACACACACACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR TCA 72 bp | AGCAACTGCTCTGTCTTTTGGGATCCTGTTACGATCTaGCAAAGTAAGTCCCCCTTAGTCACTAGATCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SNCSVFWDPVTI*QSKSPLVTRSA Trigger: GGCAGATCTAGTGACTAAGGGGGACTTACTTTGTCAGATCGTAACAGGATCCCAAAAGACAGAGCAGTTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025794.7 ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR GCA 72 bp | TTGAGGAGTCACAGACCAAGAAACACAGTGAGGAGATaGCTACCACCAAAAGCTAGAACTCAGTTGAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: LRSHRPRNTVRR*LPPKARTQLRT Trigger: AGTCCTCAACTGAGTTCTAGCTTTTGGTGGTAGGCATCTCCTCACTGTGTTTCTTGGTCTGTGACTCCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR CCA 72 bp | CCTTATGAGGTATGGGACAATAGAGGGTTTGAGTCCTaGGACAGCTATTTGGAATTGAGGAGTCACAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: PYEVWDNRGFES*DSYLELRSHRP Trigger: TGGTCTGTGACTCCTCAATTCCAAATAGCTGTCCCAGGACTCAAACCCTCTATTGTCCCATACCTCATAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR TCA 72 bp | GTTTGGGACTTTTATTTCCACTCTCCTGTGACTAAATaGCACACATGGAGTAGGGAAAAGGGCACTGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: VWDFYFHSPVTK*HTWSREKGTGS Trigger: ACTGCCAGTGCCCTTTTCCCTACTCCATGTGTGTCATTTAGTCACAGGAGAGTGGAAATAAAAGTCCCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR TCA 72 bp | GAGAGCCTGCTCTCCAGGATAGGGAATCTCAGGGTCTaGGCTATGAGGACTCAAGATTTAATGAATTTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: ESLLSRIGNLRV*AMRTQDLMNFD Trigger: GTCAAAATTCATTAAATCTTGAGTCCTCATAGCTCAGACCCTGAGATTCCCTATCCTGGAGAGCAGGCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR GCA 72 bp | CTTGACAAAATACAACTGAACTACATCCTCACCCTCTaGTTCTCTCTGAGGATGACACCTGTGACTGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LDKIQLNYILTL*FSLRMTPVTEV Trigger: CACTTCAGTCACAGGTGTCATCCTCAGAGAGAAGCAGAGGGTGAGGATGTAGTTCAGTTGTATTTTGTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGTGTTTACATAACCTTTGTCTTAAGACACATCACCCCATATCACCTTTCTGAAAGCTTAAATAGGTaGGGGCAGGGCAGCAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SCVYITFVLRHITPYHLSESLNR*GQGSRR Trigger: TCTCCTGCTGCCCTGCCCCAACCTATTTAAGCTTTC...AGAAAGGTGATATGGGGTGATGTGTCTTAAGACAAAGGTTATGTAAACACAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCAGAGCTGTGTTCTCTCATAACACTGAAGACACAAATCCATAACCAAGCTACCTTCTCTGTGTTCTaGCTAATTTCTGATGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TAELCSLITLKTQIHNQATFSVF*LISDGF Trigger: GAAGCCATCAGAAATTAGCAAGAACACAGAGAAGGT...AGCTTGGTTATGGATTTGTGTCTTCAGTGTTATGAGAGAACACAGCTCTGCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR TCA 72 bp | GGTCTGAGCTATGAGGACTCAAGATTTAATGAATTTTaGCCTTATGAGGTATGGGACAATAGAGGGTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GLSYEDSRFNEF*PYEVWDNRGFE Trigger: CTCAAACCCTCTATTGTCCCATACCTCATAAGGTCAAAATTCATTAAATCTTGAGTCCTCATAGCTCAGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| CDS-3UTR CCA 90 bp | CACTGTCCCTCACTGGTGACCAGACCCTATGCCCCACCCCTCCCTGACCCAGGCAGAAGCCCCCGCTGCTaGTCCGGGCCAACACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HCPSLVTRPYAPPLPDPGRSPRC*SGPTPV Trigger: AACAGGTGTTGGCCCGGACCAGCAGCGGGGGCTTCT...GCCTGGGTCAGGGAGGGGTGGGGCATAGGGTCTGGTCACCAGTGAGGGACAGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
||
| CDS-3UTR GCA 90 bp | GGGGACTTGGAAGCAGATGAAAGCTTAAATAGGTTGGGGCAGGGCAGCAGGAGACACAGAAGCCCCCGCTaGTGGTCCGGGCCAACACCT | + |
|
Preference number: 4 (lower is better) Translates to: GDLEADESLNRLGQGSRRHRSPR*WSGPTP Trigger: AGGTGTTGGCCCGGACCAGCAGCGGGGGCTTCTGTG...TCTCCTGCTGCCCTGCCCCAACCTATTTAAGCTTTCATCTGCTTCCAAGTCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025794.7 ENSMUST00000179433.8 |
||
| CDS-3UTR GCA 90 bp | GTACCCTGCTCTGTCCTATGCCAGGCTGAGGAGACAAATATCCCAAAGTGGCTGCACAGAAGCCCCCGCTaGTGGTCCGGGCCAACACCT | + |
|
Preference number: 4 (lower is better) Translates to: VPCSVLCQAEETNIPKWLHRSPR*WSGPTP Trigger: AGGTGTTGGCCCGGACCAGCAGCGGGGGCTTCTGTG...CAGCCACTTTGGGATATTTGTCTCCTCAGCCTGGCATAGGACAGAGCAGGGTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
||
| CDS-3UTR CCA 90 bp | CTTATTGAGGGGGCTTCTCTGTCTAAGCAGAAGGTTGGAAGGCTGCTGAGGGTGCACTCTGGCCACCGATaGCCACACGGCCACAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LIEGASLSKQKVGRLLRVHSGHR*PHGHSP Trigger: TGGGCTGTGGCCGTGTGGCCATCGGTGGCCAGAGTG...CACCCTCAGCAGCCTTCCAACCTTCTGCTTAGACAGAGAAGCCCCCTCAATAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025794.7 ENSMUST00000179433.8 |
||
| CDS-3UTR CCA 90 bp | ACCACTGGGGACTTGGAAGCAGATGAAAGCTTAAATAGGTTGGGGCAGGGCAGCAGAAGCCCCCGCTGCTaGTCCGGGCCAACACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TTGDLEADESLNRLGQGSRSPRC*SGPTPV Trigger: AACAGGTGTTGGCCCGGACCAGCAGCGGGGGCTTCT...GCTGCCCTGCCCCAACCTATTTAAGCTTTCATCTGCTTCCAAGTCCCCAGTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025794.7 ENSMUST00000179433.8 |
||
| CDS-3UTR CCA 90 bp | ACGGGGACTATAGGGCGGGTAACGGAGGCCATTAAGCTTCTCCATCCCAGGGCACAGCCCAGCAATCCCTaGAGCCTCTTGAAATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGTIGRVTEAIKLLHPRAQPSNP*SLLKCF Trigger: GAAGCATTTCAAGAGGCTCCAGGGATTGCTGGGCTG...TGCCCTGGGATGGAGAAGCTTAATGGCCTCCGTTACCCGCCCTATAGTCCCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025794.7 |
||
| CDS-3UTR CCA 90 bp | GAGGAGCCACCTGCCTCTTCCAGCTCCGGGTGTCTGGTTTGTAGTCTCACCTCTCAGCCCAGCAATCCCTaGAGCCTCTTGAAATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EEPPASSSSGCLVCSLTSQPSNP*SLLKCF Trigger: GAAGCATTTCAAGAGGCTCCAGGGATTGCTGGGCTG...AGAGGTGAGACTACAAACCAGACACCCGGAGCTGGAAGAGGCAGGTGGCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTATGCTATGAGAAGGGGCTGGACCAGCCATCTACATGTCATGCCTGGCTATCTCCCTCATCACTCTaGCCACCGATGGCCACACGG | + |
|
Preference number: 4 (lower is better) Translates to: VLCYEKGLDQPSTCHAWLSPSSL*PPMATR Trigger: CCGTGTGGCCATCGGTGGCCAGAGTGATGAGGGAGA...TAGCCAGGCATGACATGTAGATGGCTGGTCCAGCCCCTTCTCATAGCATAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025794.7 ENSMUST00000179433.8 |
||
| 3UTR CAA 72 bp | GCCACAGCACAGTACAAAGCTCTGGCCCACGAATCTTaGCTAGTGTCAGAGCTCAGTGTCCATGGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ATAQYKALAHES*LVSELSVHGPR Trigger: CCTGGGCCCATGGACACTGAGCTCTGACACTAGCAAAGATTCGTGGGCCAGAGCTTTGTACTGTGCTGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR CAA 72 bp | CCTGACCCAGGCATCAAACACACACCCAGTTCAGGGTaGAAGAGAGGGTGTCTTTGCCAGTGGGTGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PDPGIKHTPSSG*KRGCLCQWVSG Trigger: GCCAGACACCCACTGGCAAAGACACCCTCTCTTCAACCCTGAACTGGGTGTGTGTTTGATGCCTGGGTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| CDS-3UTR TCA 90 bp | GTACCCTGCTCTGTCCTATGCCAGGCTGAGGAGACAAATATCCCAAAGTGGCTGAGGTCTGCAGGTTCTTaGGGGCCAGGTCCACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VPCSVLCQAEETNIPKWLRSAGS*GPGPPH Trigger: ATGAGGTGGACCTGGCCCTCAAGAACCTGCAGACCT...CAGCCACTTTGGGATATTTGTCTCCTCAGCCTGGCATAGGACAGAGCAGGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCTCAGCCATTAGGAGCCACAGCACAGTACAAAGCTCTGGCCCACGAATCTCTCCATAGAAACGCGTaGTGGCATTCTGCAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GAQPLGATAQYKALAHESLHRNA*WHSAGQ Trigger: CTGCCCTGCAGAATGCCATCACGCGTTTCTATGGAG...AGATTCGTGGGCCAGAGCTTTGTACTGTGCTGTGGCTCCTAATGGCTGAGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTATGCTATGAGAAGGGGCTGGACCAGCCATCTACATGTCATGCCTGGCTAACTTGCCGTGGTACCTaGCCATCCCACTCGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLCYEKGLDQPSTCHAWLTCRGT*PSHSIP Trigger: TGGGATCGAGTGGGATGGGCAGGTACCACGGCAAGT...TAGCCAGGCATGACATGTAGATGGCTGGTCCAGCCCCTTCTCATAGCATAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025794.7 ENSMUST00000179433.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCTCAGCCATTAGGAGCCACAGCACAGTACAAAGCTCTGGCCCACGAATCTTGTTTGCTATTGTCCTaGAGGAAGCGGCCCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GAQPLGATAQYKALAHESCLLLS*RKRPRL Trigger: GAGCCTGGGCCGCTTCCTGCAGGACAATAGCAAACA...AGATTCGTGGGCCAGAGCTTTGTACTGTGCTGTGGCTCCTAATGGCTGAGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| CDS-3UTR GCA 90 bp | GTACCCTGCTCTGTCCTATGCCAGGCTGAGGAGACAAATATCCCAAAGTGGCTGTCTGACTCGAAGCCTTaGCCAGGTCTCCATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VPCSVLCQAEETNIPKWLSDSKP*PGLHPG Trigger: CCCTGGATGGAGACCTGGGCAAGGCTTCGAGTCAGA...CAGCCACTTTGGGATATTTGTCTCCTCAGCCTGGCATAGGACAGAGCAGGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGCCACAGCACAGTACAAAGCTCTGGCCCACGAATCTTTGCTAGTGTCAGATGGCAGCAGCAGTCATaGCGATCTTGCCTACCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSHSTVQSSGPRIFASVRWQQQS*RSCLPE Trigger: CTCGGGTAGGCAAGATCGTCATGACTGCTGCTGCCA...TCTGACACTAGCAAAGATTCGTGGGCCAGAGCTTTGTACTGTGCTGTGGCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
||
| CDS-3UTR GCA 90 bp | CCCAAACTTATTGAGGGGGCTTCTCTGTCTAAGCAGAAGGTTGGAAGGCTGCTGAAGCGGCCCAGGCTCTaGAGTTGTTCAGCCCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PKLIEGASLSKQKVGRLLKRPRL*SCSALN Trigger: GTTCAGGGCTGAACAACTGCAGAGCCTGGGCCGCTT...CAGCAGCCTTCCAACCTTCTGCTTAGACAGAGAAGCCCCCTCAATAAGTTTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| CDS-3UTR GCA 90 bp | ACGGGGACTATAGGGCGGGTAACGGAGGCCATTAAGCTTCTCCATCCCAGGGCACGTCATGAAGCTGTTTaGTATTGTCCTGCAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGTIGRVTEAIKLLHPRARHEAV*YCPAGS Trigger: GCTTCCTGCAGGACAATAGCAAACAGCTTCATGACG...TGCCCTGGGATGGAGAAGCTTAATGGCCTCCGTTACCCGCCCTATAGTCCCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| 3UTR CAA 72 bp | ATCAGGTGGGTCCCAAAGATGACTTCCCACCCTCAGTaGCAAAGCTACACTGTGTGTGGGCTACAGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IRWVPKMTSHPQ*QSYTVCGLQAV Trigger: CACAGCCTGTAGCCCACACACAGTGTAGCTTTGCAACTGAGGGTGGGAAGTCATCTTTGGGACCCACCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| 3UTR CAA 72 bp | TTCCGGATGAAAGCTGTGCTCAGCTTGGTGAGCAAGTaGGTGGACACAGGCTCATCCTTCATCCAGGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FRMKAVLSLVSK*VDTGSSFIQVC Trigger: GCAGACCTGGATGAAGGATGAGCCTGTGTCCACCAACTTGCTCACCAAGCTGAGCACAGCTTTCATCCGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
||
| CDS-3UTR TCA 90 bp | TACAGAAGGGTGCAGCTCTCAGAGCCGATAGCCCATCTTAGCAGCTGCTGCCTAACAGGGTCATGTACATaGAGCCATCGTTCCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: YRRVQLSEPIAHLSSCCLTGSCT*SHRSHR Trigger: TCTGTGGGAACGATGGCTTCATGTACATGACCCTGT...TAGGCAGCAGCTGCTAAGATGGGCTATCGGCTCTGAGAGCTGCACCCTTCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025794.7 |
||
| CDS-3UTR TCA 90 bp | ATGACTTCCCACCCTCAGTTGCAAAGCTACACTGTGTGTGGGCTACAGGCTGTGTTGTCTTCCCTGTGTTaGAGGCCTCCTTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MTSHPQLQSYTVCGLQAVLSSLC*RPPSAS Trigger: AGAGGCTGAAGGAGGCCTTCAACACAGGGAAGACAA...CACAGCCTGTAGCCCACACACAGTGTAGCTTTGCAACTGAGGGTGGGAAGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| CDS-3UTR TCA 90 bp | ACCACTGGGGACTTGGAAGCAGATGAAAGCTTAAATAGGTTGGGGCAGGGCAGCTTGTCTTCCCTGTGTTaGAGGCCTCCTTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTGDLEADESLNRLGQGSLSSLC*RPPSAS Trigger: AGAGGCTGAAGGAGGCCTTCAACACAGGGAAGACAA...GCTGCCCTGCCCCAACCTATTTAAGCTTTCATCTGCTTCCAAGTCCCCAGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
||
| CDS-3UTR TCA 90 bp | GAGGAGCCACCTGCCTCTTCCAGCTCCGGGTGTCTGGTTTGTAGTCTCACCTCTCCCCCACTAAAGGTATaGTCATCAAGTTCACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EEPPASSSSGCLVCSLTSPPLKV*SSSSQD Trigger: ATCCTGTGAACTTGATGATCATACCTTTAGTGGGGG...AGAGGTGAGACTACAAACCAGACACCCGGAGCTGGAAGAGGCAGGTGGCTCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
||
| CDS-3UTR CCA 90 bp | CCATATCACCTTTCTCCTTTCTCCTGGCCTCACACACACTTGACAAAATACAACCACTCTGGCCACCGATaGCCACACGGCCACAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PYHLSPFSWPHTHLTKYNHSGHR*PHGHSP Trigger: TGGGCTGTGGCCGTGTGGCCATCGGTGGCCAGAGTG...GTTGTATTTTGTCAAGTGTGTGTGAGGCCAGGAGAAAGGAGAAAGGTGATATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
||
| CDS-3UTR CCA 90 bp | GGGGACTTGGAAGCAGATGAAAGCTTAAATAGGTTGGGGCAGGGCAGCAGGAGAAGCGGCTTTTCCCGCTaGTTCATGAACTCGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GDLEADESLNRLGQGSRRSGFSR*FMNSMA Trigger: AGCCATCGAGTTCATGAACCAGCGGGAAAAGCCGCT...TCTCCTGCTGCCCTGCCCCAACCTATTTAAGCTTTCATCTGCTTCCAAGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
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| CDS-3UTR CCA 90 bp | CTTATTGAGGGGGCTTCTCTGTCTAAGCAGAAGGTTGGAAGGCTGCTGAGGGTGAGCAGACAGGCACGCTaGTTGGAGAAGGTGTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: LIEGASLSKQKVGRLLRVSRQAR*LEKVSK Trigger: CTTTGACACCTTCTCCAACCAGCGTGCCTGTCTGCT...CACCCTCAGCAGCCTTCCAACCTTCTGCTTAGACAGAGAAGCCCCCTCAATAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
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| CDS-3UTR GCA 90 bp | TGCGTGTGTGTGTGTGTGTGCACATGTGTGTGGTTTTCTACCATGTATCTGTGCAAGCGGCCCAGGCTCTaGAGTTGTTCAGCCCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCTCVWFSTMYLCKRPRL*SCSALN Trigger: GTTCAGGGCTGAACAACTGCAGAGCCTGGGCCGCTT...GCACAGATACATGGTAGAAAACCACACACATGTGCACACACACACACACACGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| CDS-3UTR CCA 90 bp | CCCAAACTTATTGAGGGGGCTTCTCTGTCTAAGCAGAAGGTTGGAAGGCTGCTGGACAGGCACGCTGGTTaGAGAAGGTGTCAAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: PKLIEGASLSKQKVGRLLDRHAG*RRCQRR Trigger: TCTCCTTTGACACCTTCTCCAACCAGCGTGCCTGTC...CAGCAGCCTTCCAACCTTCTGCTTAGACAGAGAAGCCCCCTCAATAAGTTTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
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| 3UTR CAA 72 bp | GTGAGGAGATGCCTACCACCAAAAGCTAGAACTCAGTaGAGGACTCAGACTTTAGGTCCAGAAAGGTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: VRRCLPPKARTQ*RTQTLGPERCL Trigger: GAGGCACCTTTCTGGACCTAAAGTCTGAGTCCTCAACTGAGTTCTAGCTTTTGGTGGTAGGCATCTCCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
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| CDS-3UTR GCA 90 bp | CCCATATCACCTTTCTCCTTTCTCCTGGCCTCACACACACTTGACAAAATACAATGTTTGCTATTGTCCTaGAGGAAGCGGCCCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PISPFSFLLASHTLDKIQCLLLS*RKRPRL Trigger: GAGCCTGGGCCGCTTCCTGCAGGACAATAGCAAACA...TTGTATTTTGTCAAGTGTGTGTGAGGCCAGGAGAAAGGAGAAAGGTGATATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| CDS-3UTR TCA 90 bp | CCATATCACCTTTCTCCTTTCTCCTGGCCTCACACACACTTGACAAAATACAACACAGGGTCATGTACATaGAGCCATCGTTCCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: PYHLSPFSWPHTHLTKYNTGSCT*SHRSHR Trigger: TCTGTGGGAACGATGGCTTCATGTACATGACCCTGT...GTTGTATTTTGTCAAGTGTGTGTGAGGCCAGGAGAAAGGAGAAAGGTGATATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
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| CDS-3UTR CCA 90 bp | ACAGCAGAGCTGTGTTCTCTCATAACACTGAAGACACAAATCCATAACCAAGCTACAGCAAAGCAGCTCTaGTCCAGATACTGGGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: TAELCSLITLKTQIHNQATAKQL*SRYWGS Trigger: GCTACCCCAGTATCTGGACCAGAGCTGCTTTGCTGT...AGCTTGGTTATGGATTTGTGTCTTCAGTGTTATGAGAGAACACAGCTCTGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
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| 3UTR CAA 72 bp | TGGGACAATAGAGGGTTTGAGTCCTGGGACAGCTATTaGGAATTGAGGAGTCACAGACCAAGAAACACAGTG | + |
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Preference number: 4 (lower is better) Translates to: WDNRGFESWDSY*ELRSHRPRNTV Trigger: CACTGTGTTTCTTGGTCTGTGACTCCTCAATTCCAAATAGCTGTCCCAGGACTCAAACCCTCTATTGTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
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| CDS-3UTR GCA 90 bp | CCCATATCACCTTTCTCCTTTCTCCTGGCCTCACACACACTTGACAAAATACAACGTCATGAAGCTGTTTaGTATTGTCCTGCAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PISPFSFLLASHTLDKIQRHEAV*YCPAGS Trigger: GCTTCCTGCAGGACAATAGCAAACAGCTTCATGACG...TTGTATTTTGTCAAGTGTGTGTGAGGCCAGGAGAAAGGAGAAAGGTGATATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR CAA 72 bp | AATAGAGGGTTTGAGTCCTGGGACAGCTATTTGGAATaGAGGAGTCACAGACCAAGAAACACAGTGAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: NRGFESWDSYLE*RSHRPRNTVRR Trigger: TCTCCTCACTGTGTTTCTTGGTCTGTGACTCCTCAATTCCAAATAGCTGTCCCAGGACTCAAACCCTCTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
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| 3UTR CAA 72 bp | TCCTCTGACCATGAGCTGCAAGAGAATCCTTCCCTCTaGAACTTGTCCGTATCAGGACATTTAATAGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: SSDHELQENPSL*NLSVSGHLIEV Trigger: GACTTCTATTAAATGTCCTGATACGGACAAGTTCAAGAGGGAAGGATTCTCTTGCAGCTCATGGTCAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| 3UTR CAA 72 bp | GTGACTGAAGTGAGCATTGAATGGATTGCCAGGATCTaGGCAAGATCCTTAACTTCATCAGATGTTGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: VTEVSIEWIARI*ARSLTSSDVEA Trigger: AGCTTCAACATCTGATGAAGTTAAGGATCTTGCCAAGATCCTGGCAATCCATTCAATGCTCACTTCAGTCAC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| CDS TCA 90 bp | TCTGACTCGAAGCCTGACTTGCCCAGGTCTCCATCCAGGGCGTCATaGAGCTGTTTGCTATTGTCCTGCAGGAAGCGGCCCAGGCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: SDSKPDLPRSPSRAS*SCLLLSCRKRPRLC Trigger: GCAGAGCCTGGGCCGCTTCCTGCAGGACAATAGCAAACAGCTTCATGACGCCCTGGATGGAGACCTGGGCAAGTCAGGCTTCGAGTCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
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| CDS GCA 90 bp | AGCCTGACTTGCCCAGGTCTCCATCCAGGGCGTCATGAAGCTGTTTaGTATTGTCCTGCAGGAAGCGGCCCAGGCTCTGCAGTTGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: SLTCPGLHPGRHEAV*YCPAGSGPGSAVVQ Trigger: CTGAACAACTGCAGAGCCTGGGCCGCTTCCTGCAGGACAATAGCAAACAGCTTCATGACGCCCTGGATGGAGACCTGGGCAAGTCAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
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| CDS GCA 90 bp | TCGAAGCCTTGCCCAGGTCTCCATCCAGGGCGTCATGAAGCTGTTTaGTATTGTCCTGCAGGAAGCGGCCCAGGCTCTGCAGTTGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: SKPCPGLHPGRHEAV*YCPAGSGPGSAVVQ Trigger: CTGAACAACTGCAGAGCCTGGGCCGCTTCCTGCAGGACAATAGCAAACAGCTTCATGACGCCCTGGATGGAGACCTGGGCAAGGCTTCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189124.2 |
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| CDS-3UTR CAA 90 bp | CTTATTGAGGGGGCTTCTCTGTCTAAGCAGAAGGTTGGAAGGCTGCTGAGGGTGCAGGTCTGCAGGTTCTaGAGGGCCAGGTCCACCTCA | + |
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Preference number: 5 (lower is better) Translates to: LIEGASLSKQKVGRLLRVQVCRF*RARSTS Trigger: TGAGGTGGACCTGGCCCTCAAGAACCTGCAGACCTG...CACCCTCAGCAGCCTTCCAACCTTCTGCTTAGACAGAGAAGCCCCCTCAATAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
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| CDS-3UTR CAA 90 bp | AGAAAACTAAACCAGAGAGGACCCCACACAGTCATGACCCTGAGAGCAATGGGCGCCCAGGCTCTGCAGTaGTTCAGCCCTGAACTTAGC | + |
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Preference number: 5 (lower is better) Translates to: RKLNQRGPHTVMTLRAMGAQALQ*FSPELS Trigger: GCTAAGTTCAGGGCTGAACAACTGCAGAGCCTGGGC...GCCCATTGCTCTCAGGGTCATGACTGTGTGGGGTCCTCTCTGGTTTAGTTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| CDS-3UTR CAA 90 bp | CTAGGCACTCGCCTTTCAGGAACCACTGGGGACTTGGAAGCAGATGAAAGCTTAGCCCAGGCTCTGCAGTaGTTCAGCCCTGAACTTAGC | + |
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Preference number: 5 (lower is better) Translates to: LGTRLSGTTGDLEADESLAQALQ*FSPELS Trigger: GCTAAGTTCAGGGCTGAACAACTGCAGAGCCTGGGC...TAAGCTTTCATCTGCTTCCAAGTCCCCAGTGGTTCCTGAAAGGCGAGTGCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| CDS-3UTR CAA 90 bp | CTGCCCAAACTTATTGAGGGGGCTTCTCTGTCTAAGCAGAAGGTTGGAAGGCTGATGATTCTGCCCAGGTaGGGGGAGGTCTGTGGGTTA | + |
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Preference number: 5 (lower is better) Translates to: LPKLIEGASLSKQKVGRLMILPR*GEVCGL Trigger: TAACCCACAGACCTCCCCCAACCTGGGCAGAATCAT...CAGCCTTCCAACCTTCTGCTTAGACAGAGAAGCCCCCTCAATAAGTTTGGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
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| CDS-3UTR CAA 90 bp | TGCGTGTGTGTGTGTGTGTGCACATGTGTGTGGTTTTCTACCATGTATCTGTGCGCAGTCATGACGATCTaGCCTACCCGAGGACTTCCT | + |
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Preference number: 5 (lower is better) Translates to: CVCVCVCTCVWFSTMYLCAVMTI*PTRGLP Trigger: AGGAAGTCCTCGGGTAGGCAAGATCGTCATGACTGC...GCACAGATACATGGTAGAAAACCACACACATGTGCACACACACACACACACGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
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| CDS-3UTR CAA 90 bp | CTGCCCAAACTTATTGAGGGGGCTTCTCTGTCTAAGCAGAAGGTTGGAAGGCTGACCTTCTCTGTGTTCTaGCTAATTTCTGATGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: LPKLIEGASLSKQKVGRLTFSVF*LISDGF Trigger: GAAGCCATCAGAAATTAGCAAGAACACAGAGAAGGT...CAGCCTTCCAACCTTCTGCTTAGACAGAGAAGCCCCCTCAATAAGTTTGGGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
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| CDS CAA 90 bp | TCGTTCCCACAGAAGCCCCCGCTGCTGGTCCGGGCCAACACCTGTTaGATGACCAATGTAGCGCTCTCCCTCATCACTCTGGCCACCGAT | + |
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Preference number: 6 (lower is better) Translates to: SFPQKPPLLVRANTC*MTNVALSLITLATD Trigger: ATCGGTGGCCAGAGTGATGAGGGAGAGCGCTACATTGGTCATCAAACAGGTGTTGGCCCGGACCAGCAGCGGGGGCTTCTGTGGGAACGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025794.7 |
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| CDS CAA 72 bp | CAGAAGCCCCCGCTGCTGGTCCGGGCCAACACCTGTTaGATGACCAATGTAGCGCTCTCCCTCATCACTCTG | + |
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Preference number: 6 (lower is better) Translates to: QKPPLLVRANTC*MTNVALSLITL Trigger: CAGAGTGATGAGGGAGAGCGCTACATTGGTCATCAAACAGGTGTTGGCCCGGACCAGCAGCGGGGGCTTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025794.7 |
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| CDS TCA 72 bp | AAGCCTGACTTGCCCAGGTCTCCATCCAGGGCGTCATaGAGCTGTTTGCTATTGTCCTGCAGGAAGCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: KPDLPRSPSRAS*SCLLLSCRKRP Trigger: GGGCCGCTTCCTGCAGGACAATAGCAAACAGCTTCATGACGCCCTGGATGGAGACCTGGGCAAGTCAGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179433.8 |
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| CDS CAA 72 bp | GCTATTGTCCTGCAGGAAGCGGCCCAGGCTCTGCAGTaGTTCAGCCCTGAACTTAGCCGTCTTTGTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: AIVLQEAAQALQ*FSPELSRLCLP Trigger: GGGAAGACAAAGACGGCTAAGTTCAGGGCTGAACAACTGCAGAGCCTGGGCCGCTTCCTGCAGGACAATAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| CDS GCA 72 bp | TGTTTGCTATTGTCCTGCAGGAAGCGGCCCAGGCTCTaGAGTTGTTCAGCCCTGAACTTAGCCGTCTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: CLLLSCRKRPRL*SCSALNLAVFV Trigger: GACAAAGACGGCTAAGTTCAGGGCTGAACAACTGCAGAGCCTGGGCCGCTTCCTGCAGGACAATAGCAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| CDS CAA 90 bp | AAGCTGTTTGCTATTGTCCTGCAGGAAGCGGCCCAGGCTCTGCAGTaGTTCAGCCCTGAACTTAGCCGTCTTTGTCTTCCCTGTGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: KLFAIVLQEAAQALQ*FSPELSRLCLPCVE Trigger: TTCAACACAGGGAAGACAAAGACGGCTAAGTTCAGGGCTGAACAACTGCAGAGCCTGGGCCGCTTCCTGCAGGACAATAGCAAACAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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| CDS CAA 72 bp | TCAGCCCTGAACTTAGCCGTCTTTGTCTTCCCTGTGTaGAAGGCCTCCTTCAGCCTCTGTAGCTTTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SALNLAVFVFPV*KASFSLCSFSS Trigger: TGAAGAAAAGCTACAGAGGCTGAAGGAGGCCTTCAACACAGGGAAGACAAAGACGGCTAAGTTCAGGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179433.8 ENSMUST00000189124.2 |
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