Pregenerated sensors for ALDH3B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024885Ensembl transcript IDs: ENSMUST00000051803.8
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGAGGCAGAGGGCTCCACCAAGAAGGGCTGAGCAGACTGCTCTGTaGCCTTGGCCCTGGCAGGCCACTTCTCTGAAGCTGTGCCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: RRQRAPPRRAEQTAL*PWPWQATSLKLCPR Trigger: CCTGGGGCACAGCTTCAGAGAAGTGGCCTGCCAGGGCCAAGGCCACAGAGCAGTCTGCTCAGCCCTTCTTGGTGGAGCCCTCTGCCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| 3UTR GCA 90 bp | GAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTaGCGATTATCACTGCTCCCTTGCAACACTATCCACGAGAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: ESEKTQTGLVTEYDL*RLSLLPCNTIHERV Trigger: CACCCTCTCGTGGATAGTGTTGCAAGGGAGCAGTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| 3UTR GCA 90 bp | TGCTCCCTTGCAACACTATCCACGAGAGGGTGGGTAGTTCAGAAGTaGTCTGTTTTCTCGAAGATTCTATGGTCACTGCATCCCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: CSLATLSTRGWVVQK*SVFSKILWSLHPFL Trigger: CAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACTTCTGAACTACCCACCCTCTCGTGGATAGTGTTGCAAGGGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| 3UTR CCA 90 bp | CATTGTGCAGATAGAAAACTGAGAGTGAGAAGACCCAGACAGGCCTaGTCACAGAGTATGACCTGTGCCGATTATCACTGCTCCCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: HCADRKLRVRRPRQA*SQSMTCADYHCSLA Trigger: TGCAAGGGAGCAGTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAGTTTTCTATCTGCACAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACGAGCAGACTGCTCTGTaGCCTTGGCCCTGGCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: VRRPRQAWSQSMTCADYHEQTAL*PWPWQA Trigger: GGCCTGCCAGGGCCAAGGCCACAGAGCAGTCTGCTC...GTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| 3UTR-3UTR GCA 90 bp | GTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACACTTCTCTGAAGCTGTaGCCCAGGCAGGCTCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: VRRPRQAWSQSMTCADYHTSLKL*PRQAPV Trigger: TACAGGAGCCTGCCTGGGGCACAGCTTCAGAGAAGT...GTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| 3UTR-3UTR CAA 90 bp | ACTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGAGACTGCTCTGTGGCCTaGGCCCTGGCAGGCCACTTC | + |
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Preference number: 3 (lower is better) Translates to: TESEKTQTGLVTEYDLCRDCSVA*ALAGHF Trigger: GAAGTGGCCTGCCAGGGCCAAGGCCACAGAGCAGTC...TCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| 3UTR GCA 72 bp | AAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTaGCGATTATCACTGCTCCCTTGCAACACTATCCAC | + |
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Preference number: 3 (lower is better) Translates to: KTQTGLVTEYDL*RLSLLPCNTIH Trigger: GTGGATAGTGTTGCAAGGGAGCAGTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| 3UTR CCA 72 bp | GATAGAAAACTGAGAGTGAGAAGACCCAGACAGGCCTaGTCACAGAGTATGACCTGTGCCGATTATCACTGC | + |
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Preference number: 3 (lower is better) Translates to: DRKLRVRRPRQA*SQSMTCADYHC Trigger: GCAGTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAGTTTTCTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| 3UTR GCA 72 bp | AGAAGTGCTCTGTTTTCTCGAAGATTCTATGGTCACTaGATCCCTTCCTGCCTTCCTACCCTCAGCCTATCT | + |
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Preference number: 3 (lower is better) Translates to: RSALFSRRFYGH*IPSCLPTLSLS Trigger: AGATAGGCTGAGGGTAGGAAGGCAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| 3UTR GCA 72 bp | GCAACACTATCCACGAGAGGGTGGGTAGTTCAGAAGTaGTCTGTTTTCTCGAAGATTCTATGGTCACTGCAT | + |
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Preference number: 3 (lower is better) Translates to: ATLSTRGWVVQK*SVFSKILWSLH Trigger: ATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACTTCTGAACTACCCACCCTCTCGTGGATAGTGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR CCA 90 bp | CTGTGGCCTTGGCCCTGGCAGGCCACTTCTCTGAAGCTGTGCCCCAGGCAGGCTAGAATCCCCCGCTGCTaGTCCGGGCCAACACCTGTT | + |
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Preference number: 4 (lower is better) Translates to: LWPWPWQATSLKLCPRQARIPRC*SGPTPV Trigger: AACAGGTGTTGGCCCGGACCAGCAGCGGGGGATTCT...AGCCTGCCTGGGGCACAGCTTCAGAGAAGTGGCCTGCCAGGGCCAAGGCCACAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR GCA 90 bp | AGGGCTCCACCAAGAAGGGCTGAGCAGACTGCTCTGTGGCCTTGGCCCTGGCAGACAGCAGGGTGCAGCTaGAGCACCTCTCCTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: RAPPRRAEQTALWPWPWQTAGCS*STSPPW Trigger: CCATGGAGGAGAGGTGCTGCAGCTGCACCCTGCTGT...CTGCCAGGGCCAAGGCCACAGAGCAGTCTGCTCAGCCCTTCTTGGTGGAGCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR TCA 90 bp | AGGGCTCCACCAAGAAGGGCTGAGCAGACTGCTCTGTGGCCTTGGCCCTGGCAGCCACCAACAACACCCTaGGGTTGCGACTGGAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: RAPPRRAEQTALWPWPWQPPTTP*GCDWSR Trigger: CCTACTCCAGTCGCAACCTCAGGGTGTTGTTGGTGG...CTGCCAGGGCCAAGGCCACAGAGCAGTCTGCTCAGCCCTTCTTGGTGGAGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR TCA 90 bp | GGGCTCCACCAAGAAGGGCTGAGCAGACTGCTCTGTGGCCTTGGCCCTGGCAGGGGTAGCGCAAGTCATTaGTTTTCTCCATTCCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: GLHQEGLSRLLCGLGPGRGSASH*FSPFPG Trigger: GCCCGGGAATGGAGAAAATCAATGACTTGCGCTACC...CCTGCCAGGGCCAAGGCCACAGAGCAGTCTGCTCAGCCCTTCTTGGTGGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR GCA 90 bp | GGGCTCCACCAAGAAGGGCTGAGCAGACTGCTCTGTGGCCTTGGCCCTGGCAGGTGGGCCAACGCCTCCTaGAGCTGTTGTTTGTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GLHQEGLSRLLCGLGPGRWANAS*SCCLLS Trigger: AGACAACAAACAACAGCTGCAGGAGGCGTTGGCCCA...CCTGCCAGGGCCAAGGCCACAGAGCAGTCTGCTCAGCCCTTCTTGGTGGAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR TCA 90 bp | ACTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGACGCTCGGAACTCAGCTaGCCTCGTCCGCCCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: TESEKTQTGLVTEYDLCRRSELS*PRPPLL Trigger: AAGGAGGGGCGGACGAGGTCAGCTGAGTTCCGAGCG...TCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR TCA 90 bp | AAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACTGCTCAAGACCGCAGGTTCCTaGGGGCCAGGTCCACCTCGG | + |
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Preference number: 4 (lower is better) Translates to: KTQTGLVTEYDLCRLSLLKTAGS*GPGPPR Trigger: CCGAGGTGGACCTGGCCCTCAGGAACCTGCGGTCTT...GAGCAGTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR TCA 90 bp | AGGGCTCCACCAAGAAGGGCTGAGCAGACTGCTCTGTGGCCTTGGCCCTGGCAGCTCCATAGAAACGTGTaGTGGCATTCTGTAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RAPPRRAEQTALWPWPWQLHRNV*WHSVGQ Trigger: CTGCCCTACAGAATGCCATCACACGTTTCTATGGAG...CTGCCAGGGCCAAGGCCACAGAGCAGTCTGCTCAGCCCTTCTTGGTGGAGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR TCA 90 bp | AGAAAACTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTTCGTCCGCCCCTCCTTaGAGGCCTCCCGCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RKLRVRRPRQAWSQSMTCSSAPP*RPPAAA Trigger: AGCAGCTGCGGGAGGCCTTCAAGGAGGGGCGGACGA...ACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAGTTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR CCA 90 bp | CTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATGGCATACAGCGCCAGTaGCTTCTCCCGCCGGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: LRVRRPRQAWSQSMTCADGIQRQ*LLPPVH Trigger: ATGAACCGGCGGGAGAAGCCACTGGCGCTGTATGCC...ATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR TCA 90 bp | CTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATGGCCTTGCTGATCTCTaGGGGCTTGAGCACCACACA | + |
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Preference number: 4 (lower is better) Translates to: LRVRRPRQAWSQSMTCADGLADL*GLEHHT Trigger: TGTGTGGTGCTCAAGCCCTCAGAGATCAGCAAGGCC...ATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR GCA 90 bp | GTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACACTTGCCGTGGTACCTaGCCATCCCGCTGGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: VRRPRQAWSQSMTCADYHTCRGT*PSRWFP Trigger: TGGGAACCAGCGGGATGGGCAGGTACCACGGCAAGT...GTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR CCA 90 bp | GTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACGACTTGTGCAGGTCTTaGGCCAACGCCTCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VRRPRQAWSQSMTCADYHDLCRS*ANASCS Trigger: GCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAGTC...GTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR TCA 90 bp | GTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACGCCTCCCGCAGCTGCTaGAGCTTGTCTTCAAACGAG | + |
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Preference number: 4 (lower is better) Translates to: VRRPRQAWSQSMTCADYHASRSC*SLSSNE Trigger: CTCGTTTGAAGACAAGCTTCAGCAGCTGCGGGAGGC...GTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR TCA 90 bp | AAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACTGCTCCTTCCGGATGAAGGCTaGGTCCAGCTGTGTAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KTQTGLVTEYDLCRLSLLLPDEG*VQLCSQ Trigger: CTGGCTACACAGCTGGACTCAGCCTTCATCCGGAAG...GAGCAGTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR TCA 90 bp | AAGTGCTCTGTTTTCTCGAAGATTCTATGGTCACTGCATCCCTTCCTGCCTTCCAGCTGCCCGGTCTCCTaGCGCCCACCCAGTACCACA | + |
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Preference number: 4 (lower is better) Translates to: KCSVFSKILWSLHPFLPSSCPVS*RPPSTT Trigger: TGTGGTACTGGGTGGGCGTCAGGAGACCGGGCAGCT...GGAAGGCAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR GCA 90 bp | ACTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATGTCAAAGGAGAACTTaGCGTGGTACCTGCCCATCC | + |
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Preference number: 4 (lower is better) Translates to: TESEKTQTGLVTEYDLCRCQRRT*RGTCPS Trigger: GGATGGGCAGGTACCACGGCAAGTTCTCCTTTGACA...TCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR CCA 90 bp | AAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACTGCTCTTGTCTCGGAGGAAGTaGCTCAGGCCTTGCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KTQTGLVTEYDLCRLSLLLSRRK*LRPCSC Trigger: ACAGCTGCAAGGCCTGAGCCACTTCCTCCGAGACAA...GAGCAGTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR GCA 90 bp | AGTGCTCTGTTTTCTCGAAGATTCTATGGTCACTGCATCCCTTCCTGCCTTCCTAAGTGGCTCAGGCCTTaGAGCTGTGCCGCTCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: SALFSRRFYGHCIPSCLPKWLRP*SCAARN Trigger: GTTCCGAGCGGCACAGCTGCAAGGCCTGAGCCACTT...AGGAAGGCAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR GCA 90 bp | CCTTCCTGCCTTCCTACCCTCAGCCTATCTTATTCAAAGGTCCAAAAAGGGGAGCACCACACAATTCCCTaGAGCTATGGCCCCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: PSCLPTLSLSYSKVQKGEHHTIP*SYGPHQ Trigger: CTGGTGGGGGCCATAGCTGCAGGGAATTGTGTGGTG...CTCCCCTTTTTGGACCTTTGAATAAGATAGGCTGAGGGTAGGAAGGCAGGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR CCA 90 bp | AGTGCTCTGTTTTCTCGAAGATTCTATGGTCACTGCATCCCTTCCTGCCTTCCTAATTCCCTGCAGCTATaGCCCCCACCAGCGGCACGA | + |
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Preference number: 4 (lower is better) Translates to: SALFSRRFYGHCIPSCLPNSLQL*PPPAAR Trigger: TCGTGCCGCTGGTGGGGGCCATAGCTGCAGGGAATT...AGGAAGGCAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR TCA 90 bp | AAGTGCTCTGTTTTCTCGAAGATTCTATGGTCACTGCATCCCTTCCTGCCTTCCCCACCTCGGCCTGACTaGTGGCAATCTCAGACACCT | + |
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Preference number: 4 (lower is better) Translates to: KCSVFSKILWSLHPFLPSPPRPD*WQSQTP Trigger: AGGTGTCTGAGATTGCCATCAGTCAGGCCGAGGTGG...GGAAGGCAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR TCA 90 bp | AAGTGCTCTGTTTTCTCGAAGATTCTATGGTCACTGCATCCCTTCCTGCCTTCCAGGTCCACCTCGGCCTaGCTGATGGCAATCTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: KCSVFSKILWSLHPFLPSRSTSA*LMAISD Trigger: GTCTGAGATTGCCATCAGTCAGGCCGAGGTGGACCT...GGAAGGCAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR TCA 90 bp | AGAAAACTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTTCTCCCGCCGGTTCATaGACTCGATGGCTTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: RKLRVRRPRQAWSQSMTCSPAGS*TRWLHP Trigger: TGGATGAAGCCATCGAGTTCATGAACCGGCGGGAGA...ACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAGTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR TCA 90 bp | GTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACACAGGGTCATGTGCATaGAGCCATCATTCCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: VRRPRQAWSQSMTCADYHTGSCA*SHHSHR Trigger: TCTGTGGGAATGATGGCTTCATGCACATGACCCTGT...GTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR GCA 90 bp | AAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACTGCTCTGGAGTCGCTTGAAATaGTTCTGGTTGATGATTCTG | + |
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Preference number: 4 (lower is better) Translates to: KTQTGLVTEYDLCRLSLLWSRLK*FWLMIL Trigger: CAGAATCATCAACCAGAAGCATTTCAAGCGACTCCA...GAGCAGTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR GCA 90 bp | TTCAGAAGTGCTCTGTTTTCTCGAAGATTCTATGGTCACTGCATCCCTTCCTGCCTGGACAGGGTCATGTaGATGAAGCCATCATTCCCA | + |
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Preference number: 4 (lower is better) Translates to: FRSALFSRRFYGHCIPSCLDRVM*MKPSFP Trigger: TGGGAATGATGGCTTCATGCACATGACCCTGTCCAG...GCAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACTTCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR TCA 90 bp | AAGTGCTCTGTTTTCTCGAAGATTCTATGGTCACTGCATCCCTTCCTGCCTTCCCATAAGCATTCCCTGTaGAGAAGATGTAGTCGAACT | + |
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Preference number: 4 (lower is better) Translates to: KCSVFSKILWSLHPFLPSHKHSL*RRCSRT Trigger: AGTTCGACTACATCTTCTTCACAGGGAATGCTTATG...GGAAGGCAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR CAA 90 bp | GGGCTCCACCAAGAAGGGCTGAGCAGACTGCTCTGTGGCCTTGGCCCTGGCAGGCTCGTCCGCCCCTCCTaGAAGGCCTCCCGCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GLHQEGLSRLLCGLGPGRLVRPS*KASRSC Trigger: GCAGCTGCGGGAGGCCTTCAAGGAGGGGCGGACGAG...CCTGCCAGGGCCAAGGCCACAGAGCAGTCTGCTCAGCCCTTCTTGGTGGAGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR CAA 90 bp | CTGTGGCCTTGGCCCTGGCAGGCCACTTCTCTGAAGCTGTGCCCCAGGCAGGCTATGATTCTGCCCAGGTaGGGGGAGGTCTGTGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: LWPWPWQATSLKLCPRQAMILPR*GEVCGL Trigger: CAACCCACAGACCTCCCCCAACCTGGGCAGAATCAT...AGCCTGCCTGGGGCACAGCTTCAGAGAAGTGGCCTGCCAGGGCCAAGGCCACAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS TCA 90 bp | GCAGCTGTGCCGCTCGGAACTCAGCTGACCTCGTCCGCCCCTCCTTaGAGGCCTCCCGCAGCTGCTGAAGCTTGTCTTCAAACGAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: AAVPLGTQLTSSAPP*RPPAAAEACLQTSP Trigger: TGGACTCGTTTGAAGACAAGCTTCAGCAGCTGCGGGAGGCCTTCAAGGAGGGGCGGACGAGGTCAGCTGAGTTCCGAGCGGCACAGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS GCA 90 bp | TCCTGCAGCTGTTGTTTGTTGTCTCGGAGGAAGTGGCTCAGGCCTTaGAGCTGTGCCGCTCGGAACTCAGCTGACCTCGTCCGCCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SCSCCLLSRRKWLRP*SCAARNSADLVRPS Trigger: GGAGGGGCGGACGAGGTCAGCTGAGTTCCGAGCGGCACAGCTGCAAGGCCTGAGCCACTTCCTCCGAGACAACAAACAACAGCTGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS CCA 90 bp | TGGGCCAACGCCTCCTGCAGCTGTTGTTTGTTGTCTCGGAGGAAGTaGCTCAGGCCTTGCAGCTGTGCCGCTCGGAACTCAGCTGACCTC | + |
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Preference number: 5 (lower is better) Translates to: WANASCSCCLLSRRK*LRPCSCAARNSADL Trigger: GAGGTCAGCTGAGTTCCGAGCGGCACAGCTGCAAGGCCTGAGCCACTTCCTCCGAGACAACAAACAACAGCTGCAGGAGGCGTTGGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR CAA 90 bp | GGGCTCCACCAAGAAGGGCTGAGCAGACTGCTCTGTGGCCTTGGCCCTGGCAGGATAACCTGGCTTCTCTaGGAGAAGGCATACAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: GLHQEGLSRLLCGLGPGRITWLL*EKAYSA Trigger: GGCGCTGTATGCCTTCTCCAAGAGAAGCCAGGTTAT...CCTGCCAGGGCCAAGGCCACAGAGCAGTCTGCTCAGCCCTTCTTGGTGGAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS TCA 90 bp | TTCATCCAAGACCGCAGGTTCCTGAGGGCCAGGTCCACCTCGGCCTaGCTGATGGCAATCTCAGACACCTCGGCCTCGAAGGCTGACTTG | + |
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Preference number: 5 (lower is better) Translates to: FIQDRRFLRARSTSA*LMAISDTSASKADL Trigger: CAAGTCAGCCTTCGAGGCCGAGGTGTCTGAGATTGCCATCAGTCAGGCCGAGGTGGACCTGGCCCTCAGGAACCTGCGGTCTTGGATGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS GCA 90 bp | TCGGCCTCGAAGGCTGACTTGTGCAGGTCTTGGGCCAACGCCTCCTaGAGCTGTTGTTTGTTGTCTCGGAGGAAGTGGCTCAGGCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: SASKADLCRSWANAS*SCCLLSRRKWLRPC Trigger: GCAAGGCCTGAGCCACTTCCTCCGAGACAACAAACAACAGCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAGTCAGCCTTCGAGGCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS TCA 90 bp | CTCGGCCTGACTGATGGCAATCTCAGACACCTCGGCCTCGAAGGCTaGCTTGTGCAGGTCTTGGGCCAACGCCTCCTGCAGCTGTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: LGLTDGNLRHLGLEG*LVQVLGQRLLQLLF Trigger: AAACAACAGCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAGTCAGCCTTCGAGGCCGAGGTGTCTGAGATTGCCATCAGTCAGGCCGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS TCA 90 bp | TGGTTCCCACTCCTCCAAAAGGAAGGCTGGACAGGGTCATGTGCATaGAGCCATCATTCCCACAGAATCCCCCGCTGCTGGTCCGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: WFPLLQKEGWTGSCA*SHHSHRIPRCWSGP Trigger: TGGCCCGGACCAGCAGCGGGGGATTCTGTGGGAATGATGGCTTCATGCACATGACCCTGTCCAGCCTTCCTTTTGGAGGAGTGGGAACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS CCA 90 bp | CTCCATGGCCACCAACAACACCCTGAGGTTGCGACTGGAGTAGGGTaGGTAGCGCAAGTCATTGATTTTCTCCATTCCCGGGCTGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: LHGHQQHPEVATGVG*VAQVIDFLHSRAAQ Trigger: CTGCGCAGCCCGGGAATGGAGAAAATCAATGACTTGCGCTACCCACCCTACTCCAGTCGCAACCTCAGGGTGTTGTTGGTGGCCATGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR CAA 90 bp | GTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACGAAGTGGCTCAGGCCTaGCAGCTGTGCCGCTCGGAA | + |
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Preference number: 5 (lower is better) Translates to: VRRPRQAWSQSMTCADYHEVAQA*QLCRSE Trigger: TTCCGAGCGGCACAGCTGCAAGGCCTGAGCCACTTC...GTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR CAA 90 bp | ACTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGAATGGGTGTCAGGTGTTaGGCAGCAGCAGCCATGACG | + |
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Preference number: 5 (lower is better) Translates to: TESEKTQTGLVTEYDLCRMGVRC*AAAAMT Trigger: CGTCATGGCTGCTGCTGCCAAACACCTGACACCCAT...TCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR CAA 90 bp | CTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATCGCCTCCTGCAGCTGTaGTTTGTTGTCTCGGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: LRVRRPRQAWSQSMTCADRLLQL*FVVSEE Trigger: TTCCTCCGAGACAACAAACAACAGCTGCAGGAGGCG...ATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR CAA 90 bp | CTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATGTGTCAAAGGAGAACTaGCCGTGGTACCTGCCCATC | + |
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Preference number: 5 (lower is better) Translates to: LRVRRPRQAWSQSMTCADVSKEN*PWYLPI Trigger: GATGGGCAGGTACCACGGCAAGTTCTCCTTTGACAC...ATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR CAA 90 bp | GTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACCTGATCTCTGAGGGCTaGAGCACCACACAATTCCCT | + |
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Preference number: 5 (lower is better) Translates to: VRRPRQAWSQSMTCADYHLISEG*STTQFP Trigger: AGGGAATTGTGTGGTGCTCAAGCCCTCAGAGATCAG...GTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS TCA 90 bp | CACGATGATAAGCACCAGACCGAAGGGCTCCTTCCGGATGAAGGCTaGGTCCAGCTGTGTAGCCAGATTCTTGGACACTTTCTCATCCTT | + |
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Preference number: 5 (lower is better) Translates to: HDDKHQTEGLLPDEG*VQLCSQILGHFLIL Trigger: AAGGATGAGAAAGTGTCCAAGAATCTGGCTACACAGCTGGACTCAGCCTTCATCCGGAAGGAGCCCTTCGGTCTGGTGCTTATCATCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR CAA 90 bp | GTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACATCTTTTCAGTGGCCTaGCTGATCTCTGAGGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: VRRPRQAWSQSMTCADYHIFSVA*LISEGL Trigger: CAAGCCCTCAGAGATCAGCAAGGCCACTGAAAAGAT...GTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR CAA 90 bp | AGTGCTCTGTTTTCTCGAAGATTCTATGGTCACTGCATCCCTTCCTGCCTTCCTTCCTGCAGCTGTTGTTaGTTGTCTCGGAGGAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: SALFSRRFYGHCIPSCLPSCSCC*LSRRKW Trigger: CCACTTCCTCCGAGACAACAAACAACAGCTGCAGGA...AGGAAGGCAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR CAA 90 bp | AAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACTGCTCTGTGTAGCCAGATTCTaGGACACTTTCTCATCCTTC | + |
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Preference number: 5 (lower is better) Translates to: KTQTGLVTEYDLCRLSLLCVARF*DTFSSF Trigger: GAAGGATGAGAAAGTGTCCAAGAATCTGGCTACACA...GAGCAGTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS-3UTR CAA 90 bp | CCTTCCTGCCTTCCTACCCTCAGCCTATCTTATTCAAAGGTCCAAAAAGGGGAGTTGAAATGCTTCTGGTaGATGATTCTGCCCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: PSCLPTLSLSYSKVQKGELKCFW*MILPRL Trigger: CAACCTGGGCAGAATCATCAACCAGAAGCATTTCAA...CTCCCCTTTTTGGACCTTTGAATAAGATAGGCTGAGGGTAGGAAGGCAGGAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS TCA 72 bp | CCGCTCGGAACTCAGCTGACCTCGTCCGCCCCTCCTTaGAGGCCTCCCGCAGCTGCTGAAGCTTGTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: PLGTQLTSSAPP*RPPAAAEACLQ Trigger: TTGAAGACAAGCTTCAGCAGCTGCGGGAGGCCTTCAAGGAGGGGCGGACGAGGTCAGCTGAGTTCCGAGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS CAA 90 bp | GACTTGTGCAGGTCTTGGGCCAACGCCTCCTGCAGCTGTTGTTTGTaGTCTCGGAGGAAGTGGCTCAGGCCTTGCAGCTGTGCCGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: DLCRSWANASCSCCL*SRRKWLRPCSCAAR Trigger: CCGAGCGGCACAGCTGCAAGGCCTGAGCCACTTCCTCCGAGACAACAAACAACAGCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS CAA 90 bp | GCTGACTTGTGCAGGTCTTGGGCCAACGCCTCCTGCAGCTGTTGTTaGTTGTCTCGGAGGAAGTGGCTCAGGCCTTGCAGCTGTGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: ADLCRSWANASCSCC*LSRRKWLRPCSCAA Trigger: AGCGGCACAGCTGCAAGGCCTGAGCCACTTCCTCCGAGACAACAAACAACAGCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAGTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS GCA 72 bp | GCAATCTCAGACACCTCGGCCTCGAAGGCTGACTTGTaGAGGTCTTGGGCCAACGCCTCCTGCAGCTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: AISDTSASKADL*RSWANASCSCC Trigger: ACAACAGCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAGTCAGCCTTCGAGGCCGAGGTGTCTGAGATTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS CAA 72 bp | ATGGCAATCTCAGACACCTCGGCCTCGAAGGCTGACTaGTGCAGGTCTTGGGCCAACGCCTCCTGCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: MAISDTSASKAD*CRSWANASCSC Trigger: ACAGCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAGTCAGCCTTCGAGGCCGAGGTGTCTGAGATTGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS TCA 72 bp | GGTTGCGACTGGAGTAGGGTGGGTAGCGCAAGTCATTaGTTTTCTCCATTCCCGGGCTGCGCAGCAGACAGG | + |
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Preference number: 6 (lower is better) Translates to: GCDWSRVGSASH*FSPFPGCAADR Trigger: CCTGTCTGCTGCGCAGCCCGGGAATGGAGAAAATCAATGACTTGCGCTACCCACCCTACTCCAGTCGCAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS GCA 72 bp | TGTTGTTTGTTGTCTCGGAGGAAGTGGCTCAGGCCTTaGAGCTGTGCCGCTCGGAACTCAGCTGACCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: CCLLSRRKWLRP*SCAARNSADLV Trigger: GACGAGGTCAGCTGAGTTCCGAGCGGCACAGCTGCAAGGCCTGAGCCACTTCCTCCGAGACAACAAACAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS CCA 72 bp | GACACCTCGGCCTCGAAGGCTGACTTGTGCAGGTCTTaGGCCAACGCCTCCTGCAGCTGTTGTTTGTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: DTSASKADLCRS*ANASCSCCLLS Trigger: AGACAACAAACAACAGCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAGTCAGCCTTCGAGGCCGAGGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS CAA 72 bp | CTTGTGCAGGTCTTGGGCCAACGCCTCCTGCAGCTGTaGTTTGTTGTCTCGGAGGAAGTGGCTCAGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LVQVLGQRLLQL*FVVSEEVAQAL Trigger: CAAGGCCTGAGCCACTTCCTCCGAGACAACAAACAACAGCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS CAA 72 bp | GTCCGGGCCAACACCTGTTTGATAACCTGGCTTCTCTaGGAGAAGGCATACAGCGCCAGTGGCTTCTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: VRANTCLITWLL*EKAYSASGFSR Trigger: GCGGGAGAAGCCACTGGCGCTGTATGCCTTCTCCAAGAGAAGCCAGGTTATCAAACAGGTGTTGGCCCGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS TCA 72 bp | AGGCATACAGCGCCAGTGGCTTCTCCCGCCGGTTCATaGACTCGATGGCTTCATCCAGGCTTCTCACAGTCA | + |
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Preference number: 6 (lower is better) Translates to: RHTAPVASPAGS*TRWLHPGFSQS Trigger: TGACTGTGAGAAGCCTGGATGAAGCCATCGAGTTCATGAACCGGCGGGAGAAGCCACTGGCGCTGTATGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS TCA 72 bp | CTCCTCCAAAAGGAAGGCTGGACAGGGTCATGTGCATaGAGCCATCATTCCCACAGAATCCCCCGCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LLQKEGWTGSCA*SHHSHRIPRCW Trigger: CCAGCAGCGGGGGATTCTGTGGGAATGATGGCTTCATGCACATGACCCTGTCCAGCCTTCCTTTTGGAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS GCA 72 bp | AAGGCTGACTTGTGCAGGTCTTGGGCCAACGCCTCCTaGAGCTGTTGTTTGTTGTCTCGGAGGAAGTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: KADLCRSWANAS*SCCLLSRRKWL Trigger: GAGCCACTTCCTCCGAGACAACAAACAACAGCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAGTCAGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS TCA 72 bp | AAGCACCAGACCGAAGGGCTCCTTCCGGATGAAGGCTaGGTCCAGCTGTGTAGCCAGATTCTTGGACACTTT | + |
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Preference number: 6 (lower is better) Translates to: KHQTEGLLPDEG*VQLCSQILGHF Trigger: AAAGTGTCCAAGAATCTGGCTACACAGCTGGACTCAGCCTTCATCCGGAAGGAGCCCTTCGGTCTGGTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS CCA 72 bp | CACCAACAACACCCTGAGGTTGCGACTGGAGTAGGGTaGGTAGCGCAAGTCATTGATTTTCTCCATTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: HQQHPEVATGVG*VAQVIDFLHSR Trigger: CCGGGAATGGAGAAAATCAATGACTTGCGCTACCCACCCTACTCCAGTCGCAACCTCAGGGTGTTGTTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS CAA 72 bp | CGGATGAAGGCTGAGTCCAGCTGTGTAGCCAGATTCTaGGACACTTTCTCATCCTTCATCCAAGACCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RMKAESSCVARF*DTFSSFIQDRR Trigger: CCTGCGGTCTTGGATGAAGGATGAGAAAGTGTCCAAGAATCTGGCTACACAGCTGGACTCAGCCTTCATCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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| CDS TCA 72 bp | CTCAGCCAGTATCTTTTCAGTGGCCTTGCTGATCTCTaGGGGCTTGAGCACCACACAATTCCCTGCAGCTAT | + |
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Preference number: 6 (lower is better) Translates to: LSQYLFSGLADL*GLEHHTIPCSY Trigger: ATAGCTGCAGGGAATTGTGTGGTGCTCAAGCCCTCAGAGATCAGCAAGGCCACTGAAAAGATACTGGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051803.8 |
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