RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALDH3B1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024885

Ensembl transcript IDs: ENSMUST00000051803.8

Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGAGGCAGAGGGCTCCACCAAGAAGGGCTGAGCAGACTGCTCTGTaGCCTTGGCCCTGGCAGGCCACTTCTCTGAAGCTGTGCCCCAGG +
Preference number: 1 (lower is better)
Translates to: RRQRAPPRRAEQTAL*PWPWQATSLKLCPR
Trigger: CCTGGGGCACAGCTTCAGAGAAGTGGCCTGCCAGGGCCAAGGCCACAGAGCAGTCTGCTCAGCCCTTCTTGGTGGAGCCCTCTGCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
3UTR GCA 90 bp GAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTaGCGATTATCACTGCTCCCTTGCAACACTATCCACGAGAGGGTG +
Preference number: 1 (lower is better)
Translates to: ESEKTQTGLVTEYDL*RLSLLPCNTIHERV
Trigger: CACCCTCTCGTGGATAGTGTTGCAAGGGAGCAGTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
3UTR GCA 90 bp TGCTCCCTTGCAACACTATCCACGAGAGGGTGGGTAGTTCAGAAGTaGTCTGTTTTCTCGAAGATTCTATGGTCACTGCATCCCTTCCTG +
Preference number: 1 (lower is better)
Translates to: CSLATLSTRGWVVQK*SVFSKILWSLHPFL
Trigger: CAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACTTCTGAACTACCCACCCTCTCGTGGATAGTGTTGCAAGGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
3UTR CCA 90 bp CATTGTGCAGATAGAAAACTGAGAGTGAGAAGACCCAGACAGGCCTaGTCACAGAGTATGACCTGTGCCGATTATCACTGCTCCCTTGCA +
Preference number: 1 (lower is better)
Translates to: HCADRKLRVRRPRQA*SQSMTCADYHCSLA
Trigger: TGCAAGGGAGCAGTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAGTTTTCTATCTGCACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
3UTR-3UTR CCA 90 bp GTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACGAGCAGACTGCTCTGTaGCCTTGGCCCTGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: VRRPRQAWSQSMTCADYHEQTAL*PWPWQA
Trigger: GGCCTGCCAGGGCCAAGGCCACAGAGCAGTCTGCTC...GTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
3UTR-3UTR GCA 90 bp GTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACACTTCTCTGAAGCTGTaGCCCAGGCAGGCTCCTGTA +
Preference number: 2 (lower is better)
Translates to: VRRPRQAWSQSMTCADYHTSLKL*PRQAPV
Trigger: TACAGGAGCCTGCCTGGGGCACAGCTTCAGAGAAGT...GTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
3UTR-3UTR CAA 90 bp ACTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGAGACTGCTCTGTGGCCTaGGCCCTGGCAGGCCACTTC +
Preference number: 3 (lower is better)
Translates to: TESEKTQTGLVTEYDLCRDCSVA*ALAGHF
Trigger: GAAGTGGCCTGCCAGGGCCAAGGCCACAGAGCAGTC...TCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
3UTR GCA 72 bp AAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTaGCGATTATCACTGCTCCCTTGCAACACTATCCAC +
Preference number: 3 (lower is better)
Translates to: KTQTGLVTEYDL*RLSLLPCNTIH
Trigger: GTGGATAGTGTTGCAAGGGAGCAGTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
3UTR CCA 72 bp GATAGAAAACTGAGAGTGAGAAGACCCAGACAGGCCTaGTCACAGAGTATGACCTGTGCCGATTATCACTGC +
Preference number: 3 (lower is better)
Translates to: DRKLRVRRPRQA*SQSMTCADYHC
Trigger: GCAGTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAGTTTTCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
3UTR GCA 72 bp AGAAGTGCTCTGTTTTCTCGAAGATTCTATGGTCACTaGATCCCTTCCTGCCTTCCTACCCTCAGCCTATCT +
Preference number: 3 (lower is better)
Translates to: RSALFSRRFYGH*IPSCLPTLSLS
Trigger: AGATAGGCTGAGGGTAGGAAGGCAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
3UTR GCA 72 bp GCAACACTATCCACGAGAGGGTGGGTAGTTCAGAAGTaGTCTGTTTTCTCGAAGATTCTATGGTCACTGCAT +
Preference number: 3 (lower is better)
Translates to: ATLSTRGWVVQK*SVFSKILWSLH
Trigger: ATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACTTCTGAACTACCCACCCTCTCGTGGATAGTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR CCA 90 bp CTGTGGCCTTGGCCCTGGCAGGCCACTTCTCTGAAGCTGTGCCCCAGGCAGGCTAGAATCCCCCGCTGCTaGTCCGGGCCAACACCTGTT +
Preference number: 4 (lower is better)
Translates to: LWPWPWQATSLKLCPRQARIPRC*SGPTPV
Trigger: AACAGGTGTTGGCCCGGACCAGCAGCGGGGGATTCT...AGCCTGCCTGGGGCACAGCTTCAGAGAAGTGGCCTGCCAGGGCCAAGGCCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR GCA 90 bp AGGGCTCCACCAAGAAGGGCTGAGCAGACTGCTCTGTGGCCTTGGCCCTGGCAGACAGCAGGGTGCAGCTaGAGCACCTCTCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: RAPPRRAEQTALWPWPWQTAGCS*STSPPW
Trigger: CCATGGAGGAGAGGTGCTGCAGCTGCACCCTGCTGT...CTGCCAGGGCCAAGGCCACAGAGCAGTCTGCTCAGCCCTTCTTGGTGGAGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR TCA 90 bp AGGGCTCCACCAAGAAGGGCTGAGCAGACTGCTCTGTGGCCTTGGCCCTGGCAGCCACCAACAACACCCTaGGGTTGCGACTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: RAPPRRAEQTALWPWPWQPPTTP*GCDWSR
Trigger: CCTACTCCAGTCGCAACCTCAGGGTGTTGTTGGTGG...CTGCCAGGGCCAAGGCCACAGAGCAGTCTGCTCAGCCCTTCTTGGTGGAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR TCA 90 bp GGGCTCCACCAAGAAGGGCTGAGCAGACTGCTCTGTGGCCTTGGCCCTGGCAGGGGTAGCGCAAGTCATTaGTTTTCTCCATTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GLHQEGLSRLLCGLGPGRGSASH*FSPFPG
Trigger: GCCCGGGAATGGAGAAAATCAATGACTTGCGCTACC...CCTGCCAGGGCCAAGGCCACAGAGCAGTCTGCTCAGCCCTTCTTGGTGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR GCA 90 bp GGGCTCCACCAAGAAGGGCTGAGCAGACTGCTCTGTGGCCTTGGCCCTGGCAGGTGGGCCAACGCCTCCTaGAGCTGTTGTTTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: GLHQEGLSRLLCGLGPGRWANAS*SCCLLS
Trigger: AGACAACAAACAACAGCTGCAGGAGGCGTTGGCCCA...CCTGCCAGGGCCAAGGCCACAGAGCAGTCTGCTCAGCCCTTCTTGGTGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR TCA 90 bp ACTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGACGCTCGGAACTCAGCTaGCCTCGTCCGCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: TESEKTQTGLVTEYDLCRRSELS*PRPPLL
Trigger: AAGGAGGGGCGGACGAGGTCAGCTGAGTTCCGAGCG...TCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR TCA 90 bp AAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACTGCTCAAGACCGCAGGTTCCTaGGGGCCAGGTCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: KTQTGLVTEYDLCRLSLLKTAGS*GPGPPR
Trigger: CCGAGGTGGACCTGGCCCTCAGGAACCTGCGGTCTT...GAGCAGTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR TCA 90 bp AGGGCTCCACCAAGAAGGGCTGAGCAGACTGCTCTGTGGCCTTGGCCCTGGCAGCTCCATAGAAACGTGTaGTGGCATTCTGTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RAPPRRAEQTALWPWPWQLHRNV*WHSVGQ
Trigger: CTGCCCTACAGAATGCCATCACACGTTTCTATGGAG...CTGCCAGGGCCAAGGCCACAGAGCAGTCTGCTCAGCCCTTCTTGGTGGAGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR TCA 90 bp AGAAAACTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTTCGTCCGCCCCTCCTTaGAGGCCTCCCGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RKLRVRRPRQAWSQSMTCSSAPP*RPPAAA
Trigger: AGCAGCTGCGGGAGGCCTTCAAGGAGGGGCGGACGA...ACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAGTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR CCA 90 bp CTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATGGCATACAGCGCCAGTaGCTTCTCCCGCCGGTTCAT +
Preference number: 4 (lower is better)
Translates to: LRVRRPRQAWSQSMTCADGIQRQ*LLPPVH
Trigger: ATGAACCGGCGGGAGAAGCCACTGGCGCTGTATGCC...ATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR TCA 90 bp CTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATGGCCTTGCTGATCTCTaGGGGCTTGAGCACCACACA +
Preference number: 4 (lower is better)
Translates to: LRVRRPRQAWSQSMTCADGLADL*GLEHHT
Trigger: TGTGTGGTGCTCAAGCCCTCAGAGATCAGCAAGGCC...ATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR GCA 90 bp GTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACACTTGCCGTGGTACCTaGCCATCCCGCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: VRRPRQAWSQSMTCADYHTCRGT*PSRWFP
Trigger: TGGGAACCAGCGGGATGGGCAGGTACCACGGCAAGT...GTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR CCA 90 bp GTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACGACTTGTGCAGGTCTTaGGCCAACGCCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VRRPRQAWSQSMTCADYHDLCRS*ANASCS
Trigger: GCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAGTC...GTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR TCA 90 bp GTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACGCCTCCCGCAGCTGCTaGAGCTTGTCTTCAAACGAG +
Preference number: 4 (lower is better)
Translates to: VRRPRQAWSQSMTCADYHASRSC*SLSSNE
Trigger: CTCGTTTGAAGACAAGCTTCAGCAGCTGCGGGAGGC...GTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR TCA 90 bp AAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACTGCTCCTTCCGGATGAAGGCTaGGTCCAGCTGTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: KTQTGLVTEYDLCRLSLLLPDEG*VQLCSQ
Trigger: CTGGCTACACAGCTGGACTCAGCCTTCATCCGGAAG...GAGCAGTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR TCA 90 bp AAGTGCTCTGTTTTCTCGAAGATTCTATGGTCACTGCATCCCTTCCTGCCTTCCAGCTGCCCGGTCTCCTaGCGCCCACCCAGTACCACA +
Preference number: 4 (lower is better)
Translates to: KCSVFSKILWSLHPFLPSSCPVS*RPPSTT
Trigger: TGTGGTACTGGGTGGGCGTCAGGAGACCGGGCAGCT...GGAAGGCAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR GCA 90 bp ACTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATGTCAAAGGAGAACTTaGCGTGGTACCTGCCCATCC +
Preference number: 4 (lower is better)
Translates to: TESEKTQTGLVTEYDLCRCQRRT*RGTCPS
Trigger: GGATGGGCAGGTACCACGGCAAGTTCTCCTTTGACA...TCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR CCA 90 bp AAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACTGCTCTTGTCTCGGAGGAAGTaGCTCAGGCCTTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: KTQTGLVTEYDLCRLSLLLSRRK*LRPCSC
Trigger: ACAGCTGCAAGGCCTGAGCCACTTCCTCCGAGACAA...GAGCAGTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR GCA 90 bp AGTGCTCTGTTTTCTCGAAGATTCTATGGTCACTGCATCCCTTCCTGCCTTCCTAAGTGGCTCAGGCCTTaGAGCTGTGCCGCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: SALFSRRFYGHCIPSCLPKWLRP*SCAARN
Trigger: GTTCCGAGCGGCACAGCTGCAAGGCCTGAGCCACTT...AGGAAGGCAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR GCA 90 bp CCTTCCTGCCTTCCTACCCTCAGCCTATCTTATTCAAAGGTCCAAAAAGGGGAGCACCACACAATTCCCTaGAGCTATGGCCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: PSCLPTLSLSYSKVQKGEHHTIP*SYGPHQ
Trigger: CTGGTGGGGGCCATAGCTGCAGGGAATTGTGTGGTG...CTCCCCTTTTTGGACCTTTGAATAAGATAGGCTGAGGGTAGGAAGGCAGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR CCA 90 bp AGTGCTCTGTTTTCTCGAAGATTCTATGGTCACTGCATCCCTTCCTGCCTTCCTAATTCCCTGCAGCTATaGCCCCCACCAGCGGCACGA +
Preference number: 4 (lower is better)
Translates to: SALFSRRFYGHCIPSCLPNSLQL*PPPAAR
Trigger: TCGTGCCGCTGGTGGGGGCCATAGCTGCAGGGAATT...AGGAAGGCAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR TCA 90 bp AAGTGCTCTGTTTTCTCGAAGATTCTATGGTCACTGCATCCCTTCCTGCCTTCCCCACCTCGGCCTGACTaGTGGCAATCTCAGACACCT +
Preference number: 4 (lower is better)
Translates to: KCSVFSKILWSLHPFLPSPPRPD*WQSQTP
Trigger: AGGTGTCTGAGATTGCCATCAGTCAGGCCGAGGTGG...GGAAGGCAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR TCA 90 bp AAGTGCTCTGTTTTCTCGAAGATTCTATGGTCACTGCATCCCTTCCTGCCTTCCAGGTCCACCTCGGCCTaGCTGATGGCAATCTCAGAC +
Preference number: 4 (lower is better)
Translates to: KCSVFSKILWSLHPFLPSRSTSA*LMAISD
Trigger: GTCTGAGATTGCCATCAGTCAGGCCGAGGTGGACCT...GGAAGGCAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR TCA 90 bp AGAAAACTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTTCTCCCGCCGGTTCATaGACTCGATGGCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: RKLRVRRPRQAWSQSMTCSPAGS*TRWLHP
Trigger: TGGATGAAGCCATCGAGTTCATGAACCGGCGGGAGA...ACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAGTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR TCA 90 bp GTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACACAGGGTCATGTGCATaGAGCCATCATTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: VRRPRQAWSQSMTCADYHTGSCA*SHHSHR
Trigger: TCTGTGGGAATGATGGCTTCATGCACATGACCCTGT...GTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR GCA 90 bp AAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACTGCTCTGGAGTCGCTTGAAATaGTTCTGGTTGATGATTCTG +
Preference number: 4 (lower is better)
Translates to: KTQTGLVTEYDLCRLSLLWSRLK*FWLMIL
Trigger: CAGAATCATCAACCAGAAGCATTTCAAGCGACTCCA...GAGCAGTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR GCA 90 bp TTCAGAAGTGCTCTGTTTTCTCGAAGATTCTATGGTCACTGCATCCCTTCCTGCCTGGACAGGGTCATGTaGATGAAGCCATCATTCCCA +
Preference number: 4 (lower is better)
Translates to: FRSALFSRRFYGHCIPSCLDRVM*MKPSFP
Trigger: TGGGAATGATGGCTTCATGCACATGACCCTGTCCAG...GCAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACTTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR TCA 90 bp AAGTGCTCTGTTTTCTCGAAGATTCTATGGTCACTGCATCCCTTCCTGCCTTCCCATAAGCATTCCCTGTaGAGAAGATGTAGTCGAACT +
Preference number: 4 (lower is better)
Translates to: KCSVFSKILWSLHPFLPSHKHSL*RRCSRT
Trigger: AGTTCGACTACATCTTCTTCACAGGGAATGCTTATG...GGAAGGCAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR CAA 90 bp GGGCTCCACCAAGAAGGGCTGAGCAGACTGCTCTGTGGCCTTGGCCCTGGCAGGCTCGTCCGCCCCTCCTaGAAGGCCTCCCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GLHQEGLSRLLCGLGPGRLVRPS*KASRSC
Trigger: GCAGCTGCGGGAGGCCTTCAAGGAGGGGCGGACGAG...CCTGCCAGGGCCAAGGCCACAGAGCAGTCTGCTCAGCCCTTCTTGGTGGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR CAA 90 bp CTGTGGCCTTGGCCCTGGCAGGCCACTTCTCTGAAGCTGTGCCCCAGGCAGGCTATGATTCTGCCCAGGTaGGGGGAGGTCTGTGGGTTG +
Preference number: 5 (lower is better)
Translates to: LWPWPWQATSLKLCPRQAMILPR*GEVCGL
Trigger: CAACCCACAGACCTCCCCCAACCTGGGCAGAATCAT...AGCCTGCCTGGGGCACAGCTTCAGAGAAGTGGCCTGCCAGGGCCAAGGCCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS TCA 90 bp GCAGCTGTGCCGCTCGGAACTCAGCTGACCTCGTCCGCCCCTCCTTaGAGGCCTCCCGCAGCTGCTGAAGCTTGTCTTCAAACGAGTCCA +
Preference number: 5 (lower is better)
Translates to: AAVPLGTQLTSSAPP*RPPAAAEACLQTSP
Trigger: TGGACTCGTTTGAAGACAAGCTTCAGCAGCTGCGGGAGGCCTTCAAGGAGGGGCGGACGAGGTCAGCTGAGTTCCGAGCGGCACAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS GCA 90 bp TCCTGCAGCTGTTGTTTGTTGTCTCGGAGGAAGTGGCTCAGGCCTTaGAGCTGTGCCGCTCGGAACTCAGCTGACCTCGTCCGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: SCSCCLLSRRKWLRP*SCAARNSADLVRPS
Trigger: GGAGGGGCGGACGAGGTCAGCTGAGTTCCGAGCGGCACAGCTGCAAGGCCTGAGCCACTTCCTCCGAGACAACAAACAACAGCTGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS CCA 90 bp TGGGCCAACGCCTCCTGCAGCTGTTGTTTGTTGTCTCGGAGGAAGTaGCTCAGGCCTTGCAGCTGTGCCGCTCGGAACTCAGCTGACCTC +
Preference number: 5 (lower is better)
Translates to: WANASCSCCLLSRRK*LRPCSCAARNSADL
Trigger: GAGGTCAGCTGAGTTCCGAGCGGCACAGCTGCAAGGCCTGAGCCACTTCCTCCGAGACAACAAACAACAGCTGCAGGAGGCGTTGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR CAA 90 bp GGGCTCCACCAAGAAGGGCTGAGCAGACTGCTCTGTGGCCTTGGCCCTGGCAGGATAACCTGGCTTCTCTaGGAGAAGGCATACAGCGCC +
Preference number: 5 (lower is better)
Translates to: GLHQEGLSRLLCGLGPGRITWLL*EKAYSA
Trigger: GGCGCTGTATGCCTTCTCCAAGAGAAGCCAGGTTAT...CCTGCCAGGGCCAAGGCCACAGAGCAGTCTGCTCAGCCCTTCTTGGTGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS TCA 90 bp TTCATCCAAGACCGCAGGTTCCTGAGGGCCAGGTCCACCTCGGCCTaGCTGATGGCAATCTCAGACACCTCGGCCTCGAAGGCTGACTTG +
Preference number: 5 (lower is better)
Translates to: FIQDRRFLRARSTSA*LMAISDTSASKADL
Trigger: CAAGTCAGCCTTCGAGGCCGAGGTGTCTGAGATTGCCATCAGTCAGGCCGAGGTGGACCTGGCCCTCAGGAACCTGCGGTCTTGGATGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS GCA 90 bp TCGGCCTCGAAGGCTGACTTGTGCAGGTCTTGGGCCAACGCCTCCTaGAGCTGTTGTTTGTTGTCTCGGAGGAAGTGGCTCAGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: SASKADLCRSWANAS*SCCLLSRRKWLRPC
Trigger: GCAAGGCCTGAGCCACTTCCTCCGAGACAACAAACAACAGCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAGTCAGCCTTCGAGGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS TCA 90 bp CTCGGCCTGACTGATGGCAATCTCAGACACCTCGGCCTCGAAGGCTaGCTTGTGCAGGTCTTGGGCCAACGCCTCCTGCAGCTGTTGTTT +
Preference number: 5 (lower is better)
Translates to: LGLTDGNLRHLGLEG*LVQVLGQRLLQLLF
Trigger: AAACAACAGCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAGTCAGCCTTCGAGGCCGAGGTGTCTGAGATTGCCATCAGTCAGGCCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS TCA 90 bp TGGTTCCCACTCCTCCAAAAGGAAGGCTGGACAGGGTCATGTGCATaGAGCCATCATTCCCACAGAATCCCCCGCTGCTGGTCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: WFPLLQKEGWTGSCA*SHHSHRIPRCWSGP
Trigger: TGGCCCGGACCAGCAGCGGGGGATTCTGTGGGAATGATGGCTTCATGCACATGACCCTGTCCAGCCTTCCTTTTGGAGGAGTGGGAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS CCA 90 bp CTCCATGGCCACCAACAACACCCTGAGGTTGCGACTGGAGTAGGGTaGGTAGCGCAAGTCATTGATTTTCTCCATTCCCGGGCTGCGCAG +
Preference number: 5 (lower is better)
Translates to: LHGHQQHPEVATGVG*VAQVIDFLHSRAAQ
Trigger: CTGCGCAGCCCGGGAATGGAGAAAATCAATGACTTGCGCTACCCACCCTACTCCAGTCGCAACCTCAGGGTGTTGTTGGTGGCCATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR CAA 90 bp GTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACGAAGTGGCTCAGGCCTaGCAGCTGTGCCGCTCGGAA +
Preference number: 5 (lower is better)
Translates to: VRRPRQAWSQSMTCADYHEVAQA*QLCRSE
Trigger: TTCCGAGCGGCACAGCTGCAAGGCCTGAGCCACTTC...GTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR CAA 90 bp ACTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGAATGGGTGTCAGGTGTTaGGCAGCAGCAGCCATGACG +
Preference number: 5 (lower is better)
Translates to: TESEKTQTGLVTEYDLCRMGVRC*AAAAMT
Trigger: CGTCATGGCTGCTGCTGCCAAACACCTGACACCCAT...TCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR CAA 90 bp CTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATCGCCTCCTGCAGCTGTaGTTTGTTGTCTCGGAGGAA +
Preference number: 5 (lower is better)
Translates to: LRVRRPRQAWSQSMTCADRLLQL*FVVSEE
Trigger: TTCCTCCGAGACAACAAACAACAGCTGCAGGAGGCG...ATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR CAA 90 bp CTGAGAGTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATGTGTCAAAGGAGAACTaGCCGTGGTACCTGCCCATC +
Preference number: 5 (lower is better)
Translates to: LRVRRPRQAWSQSMTCADVSKEN*PWYLPI
Trigger: GATGGGCAGGTACCACGGCAAGTTCTCCTTTGACAC...ATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCACTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR CAA 90 bp GTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACCTGATCTCTGAGGGCTaGAGCACCACACAATTCCCT +
Preference number: 5 (lower is better)
Translates to: VRRPRQAWSQSMTCADYHLISEG*STTQFP
Trigger: AGGGAATTGTGTGGTGCTCAAGCCCTCAGAGATCAG...GTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS TCA 90 bp CACGATGATAAGCACCAGACCGAAGGGCTCCTTCCGGATGAAGGCTaGGTCCAGCTGTGTAGCCAGATTCTTGGACACTTTCTCATCCTT +
Preference number: 5 (lower is better)
Translates to: HDDKHQTEGLLPDEG*VQLCSQILGHFLIL
Trigger: AAGGATGAGAAAGTGTCCAAGAATCTGGCTACACAGCTGGACTCAGCCTTCATCCGGAAGGAGCCCTTCGGTCTGGTGCTTATCATCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR CAA 90 bp GTGAGAAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACATCTTTTCAGTGGCCTaGCTGATCTCTGAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: VRRPRQAWSQSMTCADYHIFSVA*LISEGL
Trigger: CAAGCCCTCAGAGATCAGCAAGGCCACTGAAAAGAT...GTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR CAA 90 bp AGTGCTCTGTTTTCTCGAAGATTCTATGGTCACTGCATCCCTTCCTGCCTTCCTTCCTGCAGCTGTTGTTaGTTGTCTCGGAGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SALFSRRFYGHCIPSCLPSCSCC*LSRRKW
Trigger: CCACTTCCTCCGAGACAACAAACAACAGCTGCAGGA...AGGAAGGCAGGAAGGGATGCAGTGACCATAGAATCTTCGAGAAAACAGAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR CAA 90 bp AAGACCCAGACAGGCCTGGTCACAGAGTATGACCTGTGCCGATTATCACTGCTCTGTGTAGCCAGATTCTaGGACACTTTCTCATCCTTC +
Preference number: 5 (lower is better)
Translates to: KTQTGLVTEYDLCRLSLLCVARF*DTFSSF
Trigger: GAAGGATGAGAAAGTGTCCAAGAATCTGGCTACACA...GAGCAGTGATAATCGGCACAGGTCATACTCTGTGACCAGGCCTGTCTGGGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS-3UTR CAA 90 bp CCTTCCTGCCTTCCTACCCTCAGCCTATCTTATTCAAAGGTCCAAAAAGGGGAGTTGAAATGCTTCTGGTaGATGATTCTGCCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: PSCLPTLSLSYSKVQKGELKCFW*MILPRL
Trigger: CAACCTGGGCAGAATCATCAACCAGAAGCATTTCAA...CTCCCCTTTTTGGACCTTTGAATAAGATAGGCTGAGGGTAGGAAGGCAGGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS TCA 72 bp CCGCTCGGAACTCAGCTGACCTCGTCCGCCCCTCCTTaGAGGCCTCCCGCAGCTGCTGAAGCTTGTCTTCAA +
Preference number: 6 (lower is better)
Translates to: PLGTQLTSSAPP*RPPAAAEACLQ
Trigger: TTGAAGACAAGCTTCAGCAGCTGCGGGAGGCCTTCAAGGAGGGGCGGACGAGGTCAGCTGAGTTCCGAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS CAA 90 bp GACTTGTGCAGGTCTTGGGCCAACGCCTCCTGCAGCTGTTGTTTGTaGTCTCGGAGGAAGTGGCTCAGGCCTTGCAGCTGTGCCGCTCGG +
Preference number: 6 (lower is better)
Translates to: DLCRSWANASCSCCL*SRRKWLRPCSCAAR
Trigger: CCGAGCGGCACAGCTGCAAGGCCTGAGCCACTTCCTCCGAGACAACAAACAACAGCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS CAA 90 bp GCTGACTTGTGCAGGTCTTGGGCCAACGCCTCCTGCAGCTGTTGTTaGTTGTCTCGGAGGAAGTGGCTCAGGCCTTGCAGCTGTGCCGCT +
Preference number: 6 (lower is better)
Translates to: ADLCRSWANASCSCC*LSRRKWLRPCSCAA
Trigger: AGCGGCACAGCTGCAAGGCCTGAGCCACTTCCTCCGAGACAACAAACAACAGCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS GCA 72 bp GCAATCTCAGACACCTCGGCCTCGAAGGCTGACTTGTaGAGGTCTTGGGCCAACGCCTCCTGCAGCTGTTGT +
Preference number: 6 (lower is better)
Translates to: AISDTSASKADL*RSWANASCSCC
Trigger: ACAACAGCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAGTCAGCCTTCGAGGCCGAGGTGTCTGAGATTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS CAA 72 bp ATGGCAATCTCAGACACCTCGGCCTCGAAGGCTGACTaGTGCAGGTCTTGGGCCAACGCCTCCTGCAGCTGT +
Preference number: 6 (lower is better)
Translates to: MAISDTSASKAD*CRSWANASCSC
Trigger: ACAGCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAGTCAGCCTTCGAGGCCGAGGTGTCTGAGATTGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS TCA 72 bp GGTTGCGACTGGAGTAGGGTGGGTAGCGCAAGTCATTaGTTTTCTCCATTCCCGGGCTGCGCAGCAGACAGG +
Preference number: 6 (lower is better)
Translates to: GCDWSRVGSASH*FSPFPGCAADR
Trigger: CCTGTCTGCTGCGCAGCCCGGGAATGGAGAAAATCAATGACTTGCGCTACCCACCCTACTCCAGTCGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS GCA 72 bp TGTTGTTTGTTGTCTCGGAGGAAGTGGCTCAGGCCTTaGAGCTGTGCCGCTCGGAACTCAGCTGACCTCGTC +
Preference number: 6 (lower is better)
Translates to: CCLLSRRKWLRP*SCAARNSADLV
Trigger: GACGAGGTCAGCTGAGTTCCGAGCGGCACAGCTGCAAGGCCTGAGCCACTTCCTCCGAGACAACAAACAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS CCA 72 bp GACACCTCGGCCTCGAAGGCTGACTTGTGCAGGTCTTaGGCCAACGCCTCCTGCAGCTGTTGTTTGTTGTCT +
Preference number: 6 (lower is better)
Translates to: DTSASKADLCRS*ANASCSCCLLS
Trigger: AGACAACAAACAACAGCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAGTCAGCCTTCGAGGCCGAGGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS CAA 72 bp CTTGTGCAGGTCTTGGGCCAACGCCTCCTGCAGCTGTaGTTTGTTGTCTCGGAGGAAGTGGCTCAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: LVQVLGQRLLQL*FVVSEEVAQAL
Trigger: CAAGGCCTGAGCCACTTCCTCCGAGACAACAAACAACAGCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS CAA 72 bp GTCCGGGCCAACACCTGTTTGATAACCTGGCTTCTCTaGGAGAAGGCATACAGCGCCAGTGGCTTCTCCCGC +
Preference number: 6 (lower is better)
Translates to: VRANTCLITWLL*EKAYSASGFSR
Trigger: GCGGGAGAAGCCACTGGCGCTGTATGCCTTCTCCAAGAGAAGCCAGGTTATCAAACAGGTGTTGGCCCGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS TCA 72 bp AGGCATACAGCGCCAGTGGCTTCTCCCGCCGGTTCATaGACTCGATGGCTTCATCCAGGCTTCTCACAGTCA +
Preference number: 6 (lower is better)
Translates to: RHTAPVASPAGS*TRWLHPGFSQS
Trigger: TGACTGTGAGAAGCCTGGATGAAGCCATCGAGTTCATGAACCGGCGGGAGAAGCCACTGGCGCTGTATGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS TCA 72 bp CTCCTCCAAAAGGAAGGCTGGACAGGGTCATGTGCATaGAGCCATCATTCCCACAGAATCCCCCGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: LLQKEGWTGSCA*SHHSHRIPRCW
Trigger: CCAGCAGCGGGGGATTCTGTGGGAATGATGGCTTCATGCACATGACCCTGTCCAGCCTTCCTTTTGGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS GCA 72 bp AAGGCTGACTTGTGCAGGTCTTGGGCCAACGCCTCCTaGAGCTGTTGTTTGTTGTCTCGGAGGAAGTGGCTC +
Preference number: 6 (lower is better)
Translates to: KADLCRSWANAS*SCCLLSRRKWL
Trigger: GAGCCACTTCCTCCGAGACAACAAACAACAGCTGCAGGAGGCGTTGGCCCAAGACCTGCACAAGTCAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS TCA 72 bp AAGCACCAGACCGAAGGGCTCCTTCCGGATGAAGGCTaGGTCCAGCTGTGTAGCCAGATTCTTGGACACTTT +
Preference number: 6 (lower is better)
Translates to: KHQTEGLLPDEG*VQLCSQILGHF
Trigger: AAAGTGTCCAAGAATCTGGCTACACAGCTGGACTCAGCCTTCATCCGGAAGGAGCCCTTCGGTCTGGTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS CCA 72 bp CACCAACAACACCCTGAGGTTGCGACTGGAGTAGGGTaGGTAGCGCAAGTCATTGATTTTCTCCATTCCCGG +
Preference number: 6 (lower is better)
Translates to: HQQHPEVATGVG*VAQVIDFLHSR
Trigger: CCGGGAATGGAGAAAATCAATGACTTGCGCTACCCACCCTACTCCAGTCGCAACCTCAGGGTGTTGTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS CAA 72 bp CGGATGAAGGCTGAGTCCAGCTGTGTAGCCAGATTCTaGGACACTTTCTCATCCTTCATCCAAGACCGCAGG +
Preference number: 6 (lower is better)
Translates to: RMKAESSCVARF*DTFSSFIQDRR
Trigger: CCTGCGGTCTTGGATGAAGGATGAGAAAGTGTCCAAGAATCTGGCTACACAGCTGGACTCAGCCTTCATCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8
CDS TCA 72 bp CTCAGCCAGTATCTTTTCAGTGGCCTTGCTGATCTCTaGGGGCTTGAGCACCACACAATTCCCTGCAGCTAT +
Preference number: 6 (lower is better)
Translates to: LSQYLFSGLADL*GLEHHTIPCSY
Trigger: ATAGCTGCAGGGAATTGTGTGGTGCTCAAGCCCTCAGAGATCAGCAAGGCCACTGAAAAGATACTGGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051803.8