Pregenerated sensors for ALDH3A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010025Ensembl transcript IDs: ENSMUST00000066277.10, ENSMUST00000074127.14, ENSMUST00000108715.3, ENSMUST00000208086.2
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACCTAGCCTCAGCTCTCAAGATAACAGAGGTCAGCTGGAAAGCCTaGGCGGTGTTTGACACTGGAGTGGGCAGAGCTATGGGCTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: DLASALKITEVSWKA*AVFDTGVGRAMGWR Trigger: CCTCCAGCCCATAGCTCTGCCCACTCCAGTGTCAAACACCGCCCAGGCTTTCCAGCTGACCTCTGTTATCTTGAGAGCTGAGGCTAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR TCA 90 bp | CACCTTGACATTCATTCCCACAGACTCCCTCCTTCACCCCAGGGATaGCAGCTGCCCAGAAAAGGAGGCTCTCACGAGGGCCTCTTTGCA | + |
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Preference number: 1 (lower is better) Translates to: HLDIHSHRLPPSPQG*QLPRKGGSHEGLFA Trigger: TGCAAAGAGGCCCTCGTGAGAGCCTCCTTTTCTGGGCAGCTGTCATCCCTGGGGTGAAGGAGGGAGTCTGTGGGAATGAATGTCAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
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| 3UTR CCA 90 bp | AGCTGGGAGGACCTAGCCTCAGCTCTCAAGATAACAGAGGTCAGCTaGAAAGCCTGGGCGGTGTTTGACACTGGAGTGGGCAGAGCTATG | + |
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Preference number: 1 (lower is better) Translates to: SWEDLASALKITEVS*KAWAVFDTGVGRAM Trigger: CATAGCTCTGCCCACTCCAGTGTCAAACACCGCCCAGGCTTTCCAGCTGACCTCTGTTATCTTGAGAGCTGAGGCTAGGTCCTCCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR GCA 90 bp | ACATTCATTCCCACAGACTCCCTCCTTCACCCCAGGGATGACAGCTaGCCAGAAAAGGAGGCTCTCACGAGGGCCTCTTTGCAATGTCAC | + |
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Preference number: 1 (lower is better) Translates to: TFIPTDSLLHPRDDS*PEKEALTRASLQCH Trigger: GTGACATTGCAAAGAGGCCCTCGTGAGAGCCTCCTTTTCTGGGCAGCTGTCATCCCTGGGGTGAAGGAGGGAGTCTGTGGGAATGAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
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| 3UTR GCA 90 bp | ATGAAACAAACATTAAACATGCAGATAGTGACTGTGGACTGGCGCTaGACGGTGCATCCTCCCGGACTGACGGAGGCAGCGGTGCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: MKQTLNMQIVTVDWR*TVHPPGLTEAAVQL Trigger: GAGCTGCACCGCTGCCTCCGTCAGTCCGGGAGGATGCACCGTGCAGCGCCAGTCCACAGTCACTATCTGCATGTTTAATGTTTGTTTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
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| 3UTR CCA 90 bp | ACCTCACTCTCAACAGACAGCTGGGGCCTGACCGTCAGTGCTTACTaGACCAGCGCCGTCTATGAACTATCAGAGAAGCCAACAGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: TSLSTDSWGLTVSAY*TSAVYELSEKPTGL Trigger: AAGCCCTGTTGGCTTCTCTGATAGTTCATAGACGGCGCTGGTCCAGTAAGCACTGACGGTCAGGCCCCAGCTGTCTGTTGAGAGTGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
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| 3UTR TCA 90 bp | CCCCAGTCATGGTCACTCCCAAGTTACTGTCTGTGGGGCAAAGCTTaGCTCAGCAGGCAACCTCTGTCTCAGTCACTCTGGCTGTCTTGT | + |
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Preference number: 1 (lower is better) Translates to: PQSWSLPSYCLWGKA*LSRQPLSQSLWLSC Trigger: ACAAGACAGCCAGAGTGACTGAGACAGAGGTTGCCTGCTGAGTCAAGCTTTGCCCCACAGACAGTAACTTGGGAGTGACCATGACTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
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| 3UTR GCA 90 bp | GGGATGACAGCTGCCCAGAAAAGGAGGCTCTCACGAGGGCCTCTTTaGAATGTCACCTCTGTGATGACCTGTGGCCCAAGACAAACTTTA | + |
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Preference number: 1 (lower is better) Translates to: GMTAAQKRRLSRGPL*NVTSVMTCGPRQTL Trigger: TAAAGTTTGTCTTGGGCCACAGGTCATCACAGAGGTGACATTGCAAAGAGGCCCTCGTGAGAGCCTCCTTTTCTGGGCAGCTGTCATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
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| 3UTR TCA 90 bp | GAAAATAGGAAACTCCTACCTCACTCTCAACAGACAGCTGGGGCCTaGCCGTCAGTGCTTACTGGACCAGCGCCGTCTATGAACTATCAG | + |
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Preference number: 1 (lower is better) Translates to: ENRKLLPHSQQTAGA*PSVLTGPAPSMNYQ Trigger: CTGATAGTTCATAGACGGCGCTGGTCCAGTAAGCACTGACGGTCAGGCCCCAGCTGTCTGTTGAGAGTGAGGTAGGAGTTTCCTATTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
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| 3UTR CCA 90 bp | GAGAGCGGACTCCTGAAGGCCGGTCTCAAGCCACAATGGATGAGATaGACATACCCACCTGCAGTTTTAGTACCTCAATGCCTAACAGTA | + |
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Preference number: 1 (lower is better) Translates to: ESGLLKAGLKPQWMR*TYPPAVLVPQCLTV Trigger: TACTGTTAGGCATTGAGGTACTAAAACTGCAGGTGGGTATGTCCATCTCATCCATTGTGGCTTGAGACCGGCCTTCAGGAGTCCGCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR GCA 90 bp | CCCCAGCCCAGTCTACATCCTCTCAGCACTTGCACTGCTCTCAATTaGGGAGATTTGGCTCAAACACTGAGTTTCATTAGTGGTTTGTGG | + |
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Preference number: 1 (lower is better) Translates to: PQPSLHPLSTCTALN*GDLAQTLSFISGLW Trigger: CCACAAACCACTAATGAAACTCAGTGTTTGAGCCAAATCTCCGCAATTGAGAGCAGTGCAAGTGCTGAGAGGATGTAGACTGGGCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR CCA 90 bp | GCTCTCACGAGGGCCTCTTTGCAATGTCACCTCTGTGATGACCTGTaGCCCAAGACAAACTTTATCTGGCAATCAGGGAAAGTATGCCTA | + |
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Preference number: 1 (lower is better) Translates to: ALTRASLQCHLCDDL*PKTNFIWQSGKVCL Trigger: TAGGCATACTTTCCCTGATTGCCAGATAAAGTTTGTCTTGGGCCACAGGTCATCACAGAGGTGACATTGCAAAGAGGCCCTCGTGAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
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| 3UTR CCA 90 bp | ACTGGGACAGTCCCCACAGACTGTCACAAACACACAGACTTTGGGTaGTGCGCTATGAATAAGAAAGGATGTTTAAATGGAGAGCGGACT | + |
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Preference number: 1 (lower is better) Translates to: TGTVPTDCHKHTDFG*CAMNKKGCLNGERT Trigger: AGTCCGCTCTCCATTTAAACATCCTTTCTTATTCATAGCGCACCACCCAAAGTCTGTGTGTTTGTGACAGTCTGTGGGGACTGTCCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR TCA 90 bp | TCAGCACTTGCACTGCTCTCAATTGCGGAGATTTGGCTCAAACACTaGGTTTCATTAGTGGTTTGTGGCAACAGCTTAGGTTTGATTGCA | + |
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Preference number: 1 (lower is better) Translates to: SALALLSIAEIWLKH*VSLVVCGNSLGLIA Trigger: TGCAATCAAACCTAAGCTGTTGCCACAAACCACTAATGAAACTCAGTGTTTGAGCCAAATCTCCGCAATTGAGAGCAGTGCAAGTGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR TCA 90 bp | GAAAACCCATTCTCAAGATGGTTCTATTGTACTTTGCATTCTCAATaGACAGAGCCCATCCTTAGACCTATTGCAAATCCCTCCTCCCTA | + |
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Preference number: 1 (lower is better) Translates to: ENPFSRWFYCTLHSQ*TEPILRPIANPSSL Trigger: TAGGGAGGAGGGATTTGCAATAGGTCTAAGGATGGGCTCTGTTCATTGAGAATGCAAAGTACAATAGAACCATCTTGAGAATGGGTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
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| 3UTR GCA 90 bp | TGTCTGTCAGTGAAAACCCATTCTCAAGATGGTTCTATTGTACTTTaGATTCTCAATGAACAGAGCCCATCCTTAGACCTATTGCAAATC | + |
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Preference number: 1 (lower is better) Translates to: CLSVKTHSQDGSIVL*ILNEQSPSLDLLQI Trigger: GATTTGCAATAGGTCTAAGGATGGGCTCTGTTCATTGAGAATGCAAAGTACAATAGAACCATCTTGAGAATGGGTTTTCACTGACAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
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| 3UTR TCA 90 bp | TTAGTGGTTTGTGGCAACAGCTTAGGTTTGATTGCAGTACATCTGTaGATTTCCTGGTTTGGGTACAATTTTAAAAGTATTGGTTTGTTA | + |
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Preference number: 1 (lower is better) Translates to: LVVCGNSLGLIAVHL*ISWFGYNFKSIGLL Trigger: TAACAAACCAATACTTTTAAAATTGTACCCAAACCAGGAAATTCACAGATGTACTGCAATCAAACCTAAGCTGTTGCCACAAACCACTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCCAGGCCCCAGCAGCAGGAAGCCAGATCCACACAGATCTCTCTGCCACATCGGATCTAAGGGAGAATaGTGCCCCGCTTGCTCGGGA | + |
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Preference number: 2 (lower is better) Translates to: QPGPSSRKPDPHRSLCHIGSKGE*CPACSG Trigger: TCCCGAGCAAGCGGGGCATCATTCTCCCTTAGATCC...GATGTGGCAGAGAGATCTGTGTGGATCTGGCTTCCTGCTGCTGGGGCCTGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCAGGAAGCCAGATCCACACAGATCTCTCTGCCACATCCCTGCTTAGCCACGGATCTAAGGGAGAATaGTGCCCCGCTTGCTCGGGA | + |
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Preference number: 2 (lower is better) Translates to: AAGSQIHTDLSATSLLSHGSKGE*CPACSG Trigger: TCCCGAGCAAGCGGGGCATCATTCTCCCTTAGATCC...GTGGCTAAGCAGGGATGTGGCAGAGAGATCTGTGTGGATCTGGCTTCCTGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCCAGGCCCCAGCAGCAGGAAGCCAGATCCACACAGATCTCTCTGCCACATCGCTGTGACTGCAAGATaGTCTGAGTGGCCTTCACAA | + |
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Preference number: 2 (lower is better) Translates to: QPGPSSRKPDPHRSLCHIAVTAR*SEWPSQ Trigger: TTGTGAAGGCCACTCAGAGCATCTTGCAGTCACAGC...GATGTGGCAGAGAGATCTGTGTGGATCTGGCTTCCTGCTGCTGGGGCCTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR CAA 90 bp | CCCCCAGTCATGGTCACTCCCAAGTTACTGTCTGTGGGGCAAAGCTaGACTCAGCAGGCAACCTCTGTCTCAGTCACTCTGGCTGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: PPVMVTPKLLSVGQS*TQQATSVSVTLAVL Trigger: CAAGACAGCCAGAGTGACTGAGACAGAGGTTGCCTGCTGAGTCAAGCTTTGCCCCACAGACAGTAACTTGGGAGTGACCATGACTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
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| 3UTR-3UTR TCA 90 bp | GACACTGGAGTGGGCAGAGCTATGGGCTGGAGGAAAATGAATGGCCAAGGAGCAGTTATCGAGTCTCCCTaGCTCATCATCGTGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: DTGVGRAMGWRKMNGQGAVIESP*LIIVDW Trigger: CCAGTCCACGATGATGAGTCAGGGAGACTCGATAAC...TGCTCCTTGGCCATTCATTTTCCTCCAGCCCATAGCTCTGCCCACTCCAGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCGGACTCCTGAAGGCCGGTCTCAAGCCACAATGGATGAGATGGACATACCCTGGGCTGGAGGAAAATaGATGGCCAAGGAGCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: ERTPEGRSQATMDEMDIPWAGGK*MAKEQL Trigger: TAACTGCTCCTTGGCCATTCATTTTCCTCCAGCCCA...GGGTATGTCCATCTCATCCATTGTGGCTTGAGACCGGCCTTCAGGAGTCCGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCCAGGCCCCAGCAGCAGGAAGCCAGATCCACACAGATCTCTCTGCCACATCCTGGAGGAAAATGAATaGCCAAGGAGCAGTTATCGA | + |
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Preference number: 2 (lower is better) Translates to: QPGPSSRKPDPHRSLCHILEENE*PRSSYR Trigger: TCGATAACTGCTCCTTGGCCATTCATTTTCCTCCAG...GATGTGGCAGAGAGATCTGTGTGGATCTGGCTTCCTGCTGCTGGGGCCTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCGGACTCCTGAAGGCCGGTCTCAAGCCACAATGGATGAGATGGACATACCCGGCAGAGCTATGGGCTaGAGGAAAATGAATGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: ERTPEGRSQATMDEMDIPGRAMG*RKMNGQ Trigger: TTGGCCATTCATTTTCCTCCAGCCCATAGCTCTGCC...GGGTATGTCCATCTCATCCATTGTGGCTTGAGACCGGCCTTCAGGAGTCCGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCAGGAAGCCAGATCCACACAGATCTCTCTGCCACATCCCTGCTTAGCCACATAACAGAGGTCAGCTaGAAAGCCTGGGCGGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: AAGSQIHTDLSATSLLSHITEVS*KAWAVF Trigger: AAACACCGCCCAGGCTTTCCAGCTGACCTCTGTTAT...GTGGCTAAGCAGGGATGTGGCAGAGAGATCTGTGTGGATCTGGCTTCCTGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCGGACTCCTGAAGGCCGGTCTCAAGCCACAATGGATGAGATGGACATACCCATAACAGAGGTCAGCTaGAAAGCCTGGGCGGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: ERTPEGRSQATMDEMDIPITEVS*KAWAVF Trigger: AAACACCGCCCAGGCTTTCCAGCTGACCTCTGTTAT...GGGTATGTCCATCTCATCCATTGTGGCTTGAGACCGGCCTTCAGGAGTCCGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR CAA 90 bp | AGGGATGACAGCTGCCCAGAAAAGGAGGCTCTCACGAGGGCCTCTTaGCAATGTCACCTCTGTGATGACCTGTGGCCCAAGACAAACTTT | + |
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Preference number: 2 (lower is better) Translates to: RDDSCPEKEALTRAS*QCHLCDDLWPKTNF Trigger: AAAGTTTGTCTTGGGCCACAGGTCATCACAGAGGTGACATTGCAAAGAGGCCCTCGTGAGAGCCTCCTTTTCTGGGCAGCTGTCATCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
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| 3UTR CAA 90 bp | CATGTCCTAGTTAGCTGTCTGAGGAAACCCTTTCCCCTCTCCACCTaGACATTCATTCCCACAGACTCCCTCCTTCACCCCAGGGATGAC | + |
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Preference number: 2 (lower is better) Translates to: HVLVSCLRKPFPLST*TFIPTDSLLHPRDD Trigger: GTCATCCCTGGGGTGAAGGAGGGAGTCTGTGGGAATGAATGTCAAGGTGGAGAGGGGAAAGGGTTTCCTCAGACAGCTAACTAGGACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCTTTGTTTCAACTCTGTAACCATGCGTGGAAGGCACAGCTCCCAGAAAGCTCTGTGGGGCAAAGCTTaGCTCAGCAGGCAACCTCTG | + |
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Preference number: 2 (lower is better) Translates to: LLCFNSVTMRGRHSSQKALWGKA*LSRQPL Trigger: CAGAGGTTGCCTGCTGAGTCAAGCTTTGCCCCACAG...AGCTTTCTGGGAGCTGTGCCTTCCACGCATGGTTACAGAGTTGAAACAAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
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| 3UTR-3UTR TCA 90 bp | GGTCATCACAAAGGCACTGGGACAGTCCCCACAGACTGTCACAAACACACAGACGTTATCGAGTCTCCCTaGCTCATCATCGTGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: GHHKGTGTVPTDCHKHTDVIESP*LIIVDW Trigger: CCAGTCCACGATGATGAGTCAGGGAGACTCGATAAC...GTCTGTGTGTTTGTGACAGTCTGTGGGGACTGTCCCAGTGCCTTTGTGATGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCTGAAGGCCGGTCTCAAGCCACAATGGATGAGATGGACATACCCACCTGCACATCCTCTCAGCACTTaGACTGCTCTCAATTGCGGA | + |
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Preference number: 2 (lower is better) Translates to: LLKAGLKPQWMRWTYPPAHPLST*TALNCG Trigger: TCCGCAATTGAGAGCAGTGCAAGTGCTGAGAGGATG...TGCAGGTGGGTATGTCCATCTCATCCATTGTGGCTTGAGACCGGCCTTCAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCAGGAAGCCAGATCCACACAGATCTCTCTGCCACATCCCTGCTTAGCCACTTGGCTTCAAAGTCCTaGGTTAGGGAATCTTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: AAGSQIHTDLSATSLLSHLASKS*VRESSG Trigger: GCCAGAAGATTCCCTAACCCAGGACTTTGAAGCCAA...GTGGCTAAGCAGGGATGTGGCAGAGAGATCTGTGTGGATCTGGCTTCCTGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR TCA 90 bp | AACAGTAGCTGGGAGGACCTAGCCTCAGCTCTCAAGATAACAGAGGTCAGCTGGTGGGCTGGAGGAAAATaGATGGCCAAGGAGCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: NSSWEDLASALKITEVSWWAGGK*MAKEQL Trigger: TAACTGCTCCTTGGCCATTCATTTTCCTCCAGCCCA...CCAGCTGACCTCTGTTATCTTGAGAGCTGAGGCTAGGTCCTCCCAGCTACTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGGGTGGTGCGCTATGAATAAGAAAGGATGTTTAAATGGAGAGCGGACTCCTTGGAGAGCGGACTCCTaGAGGCCGGTCTCAAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: FGWCAMNKKGCLNGERTPWRADS*RPVSSH Trigger: GTGGCTTGAGACCGGCCTTCAGGAGTCCGCTCTCCA...AGGAGTCCGCTCTCCATTTAAACATCCTTTCTTATTCATAGCGCACCACCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCAGGAAGCCAGATCCACACAGATCTCTCTGCCACATCCCTGCTTAGCCACTGCACTGCTCTCAATTaGGGAGATTTGGCTCAAACA | + |
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Preference number: 2 (lower is better) Translates to: AAGSQIHTDLSATSLLSHCTALN*GDLAQT Trigger: TGTTTGAGCCAAATCTCCGCAATTGAGAGCAGTGCA...GTGGCTAAGCAGGGATGTGGCAGAGAGATCTGTGTGGATCTGGCTTCCTGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCAAAGTCCTGGGTTAGGGAATCTTCTGGCCTCAGGCTCAGGAACAGCTGTGGGCAGAGCTATGGGCTaGAGGAAAATGAATGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: LQSPGLGNLLASGSGTAVGRAMG*RKMNGQ Trigger: TTGGCCATTCATTTTCCTCCAGCCCATAGCTCTGCC...CACAGCTGTTCCTGAGCCTGAGGCCAGAAGATTCCCTAACCCAGGACTTTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGCTTCAAAGTCCTGGGTTAGGGAATCTTCTGGCCTCAGGCTCAGGAACAGCGGAAGTCATTACAGCTaGTCCTCACTCTCAACAGAC | + |
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Preference number: 2 (lower is better) Translates to: LASKSWVRESSGLRLRNSGSHYS*SSLSTD Trigger: GTCTGTTGAGAGTGAGGATCAGCTGTAATGACTTCC...GCTGTTCCTGAGCCTGAGGCCAGAAGATTCCCTAACCCAGGACTTTGAAGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208086.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGCACTGGGACAGTCCCCACAGACTGTCACAAACACACAGACTTTGGGTGGTTGCACTGCTCTCAATTaGGGAGATTTGGCTCAAACA | + |
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Preference number: 2 (lower is better) Translates to: KALGQSPQTVTNTQTLGGCTALN*GDLAQT Trigger: TGTTTGAGCCAAATCTCCGCAATTGAGAGCAGTGCA...ACCACCCAAAGTCTGTGTGTTTGTGACAGTCTGTGGGGACTGTCCCAGTGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR CCA 90 bp | CTCGCCCCAGCCCAGTCTACATCCTCTCAGCACTTGCACTGCTCTCAATTGCGGTTCATTAGTGGTTTGTaGCAACAGCTTAGGTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: LAPAQSTSSQHLHCSQLRFISGL*QQLRFD Trigger: ATCAAACCTAAGCTGTTGCCACAAACCACTAATGAA...CCGCAATTGAGAGCAGTGCAAGTGCTGAGAGGATGTAGACTGGGCTGGGGCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR CCA 90 bp | TGCGCTATGAATAAGAAAGGATGTTTAAATGGAGAGCGGACTCCTGAAGGCCGGATGCCTAACAGTAGCTaGGAGGACCTAGCCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: CAMNKKGCLNGERTPEGRMPNSS*EDLASA Trigger: AGCTGAGGCTAGGTCCTCCCAGCTACTGTTAGGCAT...CCGGCCTTCAGGAGTCCGCTCTCCATTTAAACATCCTTTCTTATTCATAGCGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR CAA 90 bp | AGCTTGACTCAGCAGGCAACCTCTGTCTCAGTCACTCTGGCTGTCTaGTTACAGGACAGAAAGGAGGAGCTCACTCACTTTCTATTCACT | + |
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Preference number: 2 (lower is better) Translates to: SLTQQATSVSVTLAV*LQDRKEELTHFLFT Trigger: AGTGAATAGAAAGTGAGTGAGCTCCTCCTTTCTGTCCTGTAACAAGACAGCCAGAGTGACTGAGACAGAGGTTGCCTGCTGAGTCAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
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| 3UTR-3UTR TCA 90 bp | AAGCCTGGGCGGTGTTTGACACTGGAGTGGGCAGAGCTATGGGCTGGAGGAAAAATTTGGCTCAAACACTaGGTTTCATTAGTGGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: KPGRCLTLEWAELWAGGKIWLKH*VSLVVC Trigger: ACAAACCACTAATGAAACTCAGTGTTTGAGCCAAAT...TTTTCCTCCAGCCCATAGCTCTGCCCACTCCAGTGTCAAACACCGCCCAGGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGAAGGCCGGTCTCAAGCCACAATGGATGAGATGGACATACCCACCTGCATTCATTAGTGGTTTGTaGCAACAGCTTAGGTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: LLKAGLKPQWMRWTYPPAFISGL*QQLRFD Trigger: ATCAAACCTAAGCTGTTGCCACAAACCACTAATGAA...TGCAGGTGGGTATGTCCATCTCATCCATTGTGGCTTGAGACCGGCCTTCAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| 3UTR-3UTR CCA 90 bp | TGCGCTATGAATAAGAAAGGATGTTTAAATGGAGAGCGGACTCCTGAAGGCCGGCCACAATGGATGAGATaGACATACCCACCTGCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: CAMNKKGCLNGERTPEGRPQWMR*TYPPAV Trigger: AACTGCAGGTGGGTATGTCCATCTCATCCATTGTGG...CCGGCCTTCAGGAGTCCGCTCTCCATTTAAACATCCTTTCTTATTCATAGCGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAGATAGCCTCAACGGTGGGACAGGTTACTCAGCAAACACGGCTATACATTCATTGGCTTCAAAGTCCTaGGTTAGGGAATCTTCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: SDSLNGGTGYSANTAIHSLASKS*VRESSG Trigger: GCCAGAAGATTCCCTAACCCAGGACTTTGAAGCCAA...TGAATGTATAGCCGTGTTTGCTGAGTAACCTGTCCCACCGTTGAGGCTATCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR CAA 90 bp | GGACAGAAAGGAGGAGCTCACTCACTTTCTATTCACTTGTATTCGTaGGATGGAATGTTCCAGGCACAGGCACCAGAGATTGTGGTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GQKGGAHSLSIHLYS*DGMFQAQAPEIVVK Trigger: TTTCACCACAATCTCTGGTGCCTGTGCCTGGAACATTCCATCCAACGAATACAAGTGAATAGAAAGTGAGTGAGCTCCTCCTTTCTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR-3UTR TCA 90 bp | CAAAGGCACTGGGACAGTCCCCACAGACTGTCACAAACACACAGACTTTGGGTGATTTGGCTCAAACACTaGGTTTCATTAGTGGTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: QRHWDSPHRLSQTHRLWVIWLKH*VSLVVC Trigger: ACAAACCACTAATGAAACTCAGTGTTTGAGCCAAAT...CACCCAAAGTCTGTGTGTTTGTGACAGTCTGTGGGGACTGTCCCAGTGCCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR-3UTR GCA 90 bp | TATGAAACAAACATTAAACATGCAGATAGTGACTGTGGACTGGCGCTGCACGGTTCACGAGGGCCTCTTTaGAATGTCACCTCTGTGATG | + |
|
Preference number: 2 (lower is better) Translates to: YETNIKHADSDCGLALHGSRGPL*NVTSVM Trigger: CATCACAGAGGTGACATTGCAAAGAGGCCCTCGTGA...ACCGTGCAGCGCCAGTCCACAGTCACTATCTGCATGTTTAATGTTTGTTTCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGTTTCAACTCTGTAACCATGCGTGGAAGGCACAGCTCCCAGAAAGCTTTTCTTGTATTCGTTGGATaGAATGTTCCAGGCACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LCFNSVTMRGRHSSQKAFLVFVG*NVPGTG Trigger: GCCTGTGCCTGGAACATTCCATCCAACGAATACAAG...AAAAGCTTTCTGGGAGCTGTGCCTTCCACGCATGGTTACAGAGTTGAAACAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR-3UTR CCA 90 bp | GCCGTCTATGAACTATCAGAGAAGCCAACAGGGCTTTTCCCCTCGGCAGAGCTTAAGACAAACTTTATCTaGCAATCAGGGAAAGTATGC | + |
|
Preference number: 2 (lower is better) Translates to: AVYELSEKPTGLFPSAELKTNFI*QSGKVC Trigger: GCATACTTTCCCTGATTGCCAGATAAAGTTTGTCTT...AAGCTCTGCCGAGGGGAAAAGCCCTGTTGGCTTCTCTGATAGTTCATAGACGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| 3UTR CAA 90 bp | CTTGTTACAGGACAGAAAGGAGGAGCTCACTCACTTTCTATTCACTaGTATTCGTTGGATGGAATGTTCCAGGCACAGGCACCAGAGATT | + |
|
Preference number: 2 (lower is better) Translates to: LVTGQKGGAHSLSIH*YSLDGMFQAQAPEI Trigger: AATCTCTGGTGCCTGTGCCTGGAACATTCCATCCAACGAATACAAGTGAATAGAAAGTGAGTGAGCTCCTCCTTTCTGTCCTGTAACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR-3UTR GCA 90 bp | CTAGTTAGCTGTCTGAGGAAACCCTTTCCCCTCTCCACCTTGACATTCATTCCCCAATCAGGGAAAGTATaGCTAATAAGAACTACACCC | + |
|
Preference number: 2 (lower is better) Translates to: LVSCLRKPFPLSTLTFIPQSGKV*LIRTTP Trigger: GGGTGTAGTTCTTATTAGGCATACTTTCCCTGATTG...GGGAATGAATGTCAAGGTGGAGAGGGGAAAGGGTTTCCTCAGACAGCTAACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| 3UTR-3UTR CCA 90 bp | AACCCTGAGCATTGTCTAGACCCTAGTCATGAGCTTTGTCTGTCAGTGAAAACCTTCACTTGTATTCGTTaGATGGAATGTTCCAGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: NPEHCLDPSHELCLSVKTFTCIR*MECSRH Trigger: GTGCCTGGAACATTCCATCCAACGAATACAAGTGAA...GGTTTTCACTGACAGACAAAGCTCATGACTAGGGTCTAGACAATGCTCAGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR-3UTR GCA 90 bp | CACACACAGAAGGAAAATAGGAAACTCCTACCTCACTCTCAACAGACAGCTGGGCCAAATGATTTCAAATaGAGCTGTTATCACCAATCC | + |
|
Preference number: 2 (lower is better) Translates to: HTQKENRKLLPHSQQTAGPNDFK*SCYHQS Trigger: GGATTGGTGATAACAGCTGCATTTGAAATCATTTGG...CCCAGCTGTCTGTTGAGAGTGAGGTAGGAGTTTCCTATTTTCCTTCTGTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| 3UTR CAA 90 bp | CTCAATTGCGGAGATTTGGCTCAAACACTGAGTTTCATTAGTGGTTaGTGGCAACAGCTTAGGTTTGATTGCAGTACATCTGTGAATTTC | + |
|
Preference number: 2 (lower is better) Translates to: LNCGDLAQTLSFISG*WQQLRFDCSTSVNF Trigger: GAAATTCACAGATGTACTGCAATCAAACCTAAGCTGTTGCCACAAACCACTAATGAAACTCAGTGTTTGAGCCAAATCTCCGCAATTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTGCTGTGTAAATGTGTAATAAACTGCTTTCAGACTCTAGTGGTTTGGGGCCACACTATCTGTATTTaGTCAGCAGAGACTAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: CLLCKCVINCFQTLVVWGHTICI*SAETSF Trigger: GAAGCTAGTCTCTGCTGACCAAATACAGATAGTGTG...GCCCCAAACCACTAGAGTCTGAAAGCAGTTTATTACACATTTACACAGCAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR CAA 90 bp | AGCTCTGTTGTGATAATTGTCTTGTGGAAACCTTTCCCCAAATGTTaGCTGTGTAAATGTGTAATAAACTGCTTTCAGACTCTAGTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: SSVVIIVLWKPFPKC*LCKCVINCFQTLVV Trigger: AACCACTAGAGTCTGAAAGCAGTTTATTACACATTTACACAGCAAACATTTGGGGAAAGGTTTCCACAAGACAATTATCACAACAGAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR-3UTR TCA 90 bp | TGTGCTAGGAGAATAAGCAGAAGGCTTATCCTTGAAGATCTACAAAACATTCAACAGAAGGCTTATCCTTaGAGATCTACAAAACATTCA | + |
|
Preference number: 2 (lower is better) Translates to: CARRISRRLILEDLQNIQQKAYP*RSTKHS Trigger: TGAATGTTTTGTAGATCTTCAAGGATAAGCCTTCTG...TTGAATGTTTTGTAGATCTTCAAGGATAAGCCTTCTGCTTATTCTCCTAGCACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR GCA 72 bp | CCCACAGACTCCCTCCTTCACCCCAGGGATGACAGCTaGCCAGAAAAGGAGGCTCTCACGAGGGCCTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PTDSLLHPRDDS*PEKEALTRASL Trigger: CAAAGAGGCCCTCGTGAGAGCCTCCTTTTCTGGGCAGCTGTCATCCCTGGGGTGAAGGAGGGAGTCTGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTGAAGGCCGGTCTCAAGCCACAATGGATGAGATGGACATACCCACCTGCAAAGCCTGGGCGGTGTTaGACACTGGAGTGGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLKAGLKPQWMRWTYPPAKPGRC*TLEWAE Trigger: CTCTGCCCACTCCAGTGTCAAACACCGCCCAGGCTT...TGCAGGTGGGTATGTCCATCTCATCCATTGTGGCTTGAGACCGGCCTTCAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR TCA 72 bp | CATCCCTGCTTAGCCACACTAGGATCTAAGGGAGAATaGTGCCCCGCTTGCTCGGGAGCGCCTCTGACCATC | + |
|
Preference number: 3 (lower is better) Translates to: HPCLATLGSKGE*CPACSGAPLTI Trigger: GATGGTCAGAGGCGCTCCCGAGCAAGCGGGGCATCATTCTCCCTTAGATCCTAGTGTGGCTAAGCAGGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR TCA 72 bp | ATTCATTCCCACAGACTCCCTCCTTCACCCCAGGGATaGCAGCTGCCCAGAAAAGGAGGCTCTCACGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: IHSHRLPPSPQG*QLPRKGGSHEG Trigger: GCCCTCGTGAGAGCCTCCTTTTCTGGGCAGCTGTCATCCCTGGGGTGAAGGAGGGAGTCTGTGGGAATGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| 3UTR TCA 72 bp | GATAACAGAGGTCAGCTGGAAAGCCTGGGCGGTGTTTaGCACTGGAGTGGGCAGAGCTATGGGCTGGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: DNRGQLESLGGV*HWSGQSYGLEE Trigger: TTCCTCCAGCCCATAGCTCTGCCCACTCCAGTGTCAAACACCGCCCAGGCTTTCCAGCTGACCTCTGTTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR TCA 72 bp | AAACTCCTACCTCACTCTCAACAGACAGCTGGGGCCTaGCCGTCAGTGCTTACTGGACCAGCGCCGTCTATG | + |
|
Preference number: 3 (lower is better) Translates to: KLLPHSQQTAGA*PSVLTGPAPSM Trigger: CATAGACGGCGCTGGTCCAGTAAGCACTGACGGTCAGGCCCCAGCTGTCTGTTGAGAGTGAGGTAGGAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| 3UTR CCA 72 bp | TCAACAGACAGCTGGGGCCTGACCGTCAGTGCTTACTaGACCAGCGCCGTCTATGAACTATCAGAGAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: STDSWGLTVSAY*TSAVYELSEKP Trigger: TGGCTTCTCTGATAGTTCATAGACGGCGCTGGTCCAGTAAGCACTGACGGTCAGGCCCCAGCTGTCTGTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| 3UTR TCA 72 bp | TGGTCACTCCCAAGTTACTGTCTGTGGGGCAAAGCTTaGCTCAGCAGGCAACCTCTGTCTCAGTCACTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WSLPSYCLWGKA*LSRQPLSQSLW Trigger: CCAGAGTGACTGAGACAGAGGTTGCCTGCTGAGTCAAGCTTTGCCCCACAGACAGTAACTTGGGAGTGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR TCA 72 bp | ACACTGGAGTGGGCAGAGCTATGGGCTGGAGGAAAATaGATGGCCAAGGAGCAGTTATCGAGTCTCCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: TLEWAELWAGGK*MAKEQLSSLPD Trigger: GTCAGGGAGACTCGATAACTGCTCCTTGGCCATTCATTTTCCTCCAGCCCATAGCTCTGCCCACTCCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR GCA 72 bp | GCCCCAGCCCAGTCTACATCCTCTCAGCACTTGCACTaGTCTCAATTGCGGAGATTTGGCTCAAACACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: APAQSTSSQHLH*SQLRRFGSNTE Trigger: CTCAGTGTTTGAGCCAAATCTCCGCAATTGAGAGCAGTGCAAGTGCTGAGAGGATGTAGACTGGGCTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR CCA 72 bp | GTCCCCATCATGTTGCCTAGGTTGGCTTCAAAGTCCTaGGTTAGGGAATCTTCTGGCCTCAGGCTCAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: VPIMLPRLASKS*VRESSGLRLRN Trigger: GTTCCTGAGCCTGAGGCCAGAAGATTCCCTAACCCAGGACTTTGAAGCCAACCTAGGCAACATGATGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR GCA 72 bp | TTCTCGCCCCAGCCCAGTCTACATCCTCTCAGCACTTaGACTGCTCTCAATTGCGGAGATTTGGCTCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: FSPQPSLHPLST*TALNCGDLAQT Trigger: TGTTTGAGCCAAATCTCCGCAATTGAGAGCAGTGCAAGTGCTGAGAGGATGTAGACTGGGCTGGGGCGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR CCA 72 bp | TGGAGTGGGCAGAGCTATGGGCTGGAGGAAAATGAATaGCCAAGGAGCAGTTATCGAGTCTCCCTGACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: WSGQSYGLEENE*PRSSYRVSLTH Trigger: ATGAGTCAGGGAGACTCGATAACTGCTCCTTGGCCATTCATTTTCCTCCAGCCCATAGCTCTGCCCACTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR CCA 72 bp | AAACAAACATTAAACATGCAGATAGTGACTGTGGACTaGCGCTGCACGGTGCATCCTCCCGGACTGACGGAG | + |
|
Preference number: 3 (lower is better) Translates to: KQTLNMQIVTVD*RCTVHPPGLTE Trigger: CTCCGTCAGTCCGGGAGGATGCACCGTGCAGCGCCAGTCCACAGTCACTATCTGCATGTTTAATGTTTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGACCGTCAGTGCTTACTGGACCAGCGCCGTCTATGAACTATCAGAGAAGCCATTTCCCCTCTCCACCTaGACATTCATTCCCACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LTVSAYWTSAVYELSEKPFPLST*TFIPTD Trigger: GTCTGTGGGAATGAATGTCAAGGTGGAGAGGGGAAA...TGGCTTCTCTGATAGTTCATAGACGGCGCTGGTCCAGTAAGCACTGACGGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| 3UTR CCA 72 bp | CTCCTGAAGGCCGGTCTCAAGCCACAATGGATGAGATaGACATACCCACCTGCAGTTTTAGTACCTCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: LLKAGLKPQWMR*TYPPAVLVPQC Trigger: GCATTGAGGTACTAAAACTGCAGGTGGGTATGTCCATCTCATCCATTGTGGCTTGAGACCGGCCTTCAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTTTGTTTCAACTCTGTAACCATGCGTGGAAGGCACAGCTCCCAGAAAGCTGTCACTCTGGCTGTCTaGTTACAGGACAGAAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLCFNSVTMRGRHSSQKAVTLAV*LQDRKE Trigger: CTCCTTTCTGTCCTGTAACAAGACAGCCAGAGTGAC...AGCTTTCTGGGAGCTGTGCCTTCCACGCATGGTTACAGAGTTGAAACAAAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCTGGGCGGTGTTTGACACTGGAGTGGGCAGAGCTATGGGCTGGAGGAAAAAGTTTCATTAGTGGTTaGTGGCAACAGCTTAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: KPGRCLTLEWAELWAGGKSFISG*WQQLRF Trigger: AAACCTAAGCTGTTGCCACAAACCACTAATGAAACT...TTTTCCTCCAGCCCATAGCTCTGCCCACTCCAGTGTCAAACACCGCCCAGGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTATCGAGTCTCCCTGACTCATCATCGTGGACTGGGATCTAGTGTGACATGTACATCCTCTCAGCACTaGCACTGCTCTCAATTGCGG | + |
|
Preference number: 3 (lower is better) Translates to: SYRVSLTHHRGLGSSVTCTSSQH*HCSQLR Trigger: CCGCAATTGAGAGCAGTGCAAGTGCTGAGAGGATGT...ACATGTCACACTAGATCCCAGTCCACGATGATGAGTCAGGGAGACTCGATAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGCTTCAAAGTCCTGGGTTAGGGAATCTTCTGGCCTCAGGCTCAGGAACAGCAAAAAGCATTGCTTCTaGGCAAGAGACTCAGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LASKSWVRESSGLRLRNSKKHCF*ARDSVQ Trigger: CTGCACTGAGTCTCTTGCCAAGAAGCAATGCTTTTT...GCTGTTCCTGAGCCTGAGGCCAGAAGATTCCCTAACCCAGGACTTTGAAGCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR CCA 72 bp | ACCTGCAGTTTTAGTACCTCAATGCCTAACAGTAGCTaGGAGGACCTAGCCTCAGCTCTCAAGATAACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TCSFSTSMPNSS*EDLASALKITE Trigger: CTCTGTTATCTTGAGAGCTGAGGCTAGGTCCTCCCAGCTACTGTTAGGCATTGAGGTACTAAAACTGCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR CCA 72 bp | AGGGCCTCTTTGCAATGTCACCTCTGTGATGACCTGTaGCCCAAGACAAACTTTATCTGGCAATCAGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RASLQCHLCDDL*PKTNFIWQSGK Trigger: TTTCCCTGATTGCCAGATAAAGTTTGTCTTGGGCCACAGGTCATCACAGAGGTGACATTGCAAAGAGGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| 3UTR-3UTR CAA 90 bp | GGTCATCACAAAGGCACTGGGACAGTCCCCACAGACTGTCACAAACACACAGACAGTTTCATTAGTGGTTaGTGGCAACAGCTTAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GHHKGTGTVPTDCHKHTDSFISG*WQQLRF Trigger: AAACCTAAGCTGTTGCCACAAACCACTAATGAAACT...GTCTGTGTGTTTGTGACAGTCTGTGGGGACTGTCCCAGTGCCTTTGTGATGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCTGTTGTGATAATTGTCTTGTGGAAACCTTTCCCCAAATGTTTGCTGTGTTCTGTGGGGCAAAGCTaGACTCAGCAGGCAACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSVVIIVLWKPFPKCLLCSVGQS*TQQATS Trigger: AGAGGTTGCCTGCTGAGTCAAGCTTTGCCCCACAGA...ACACAGCAAACATTTGGGGAAAGGTTTCCACAAGACAATTATCACAACAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR GCA 72 bp | TCTCAAGCCACAATGGATGAGATGGACATACCCACCTaGAGTTTTAGTACCTCAATGCCTAACAGTAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SQATMDEMDIPT*SFSTSMPNSSW Trigger: CCAGCTACTGTTAGGCATTGAGGTACTAAAACTGCAGGTGGGTATGTCCATCTCATCCATTGTGGCTTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR CCA 72 bp | GAGGAGCTCACTCACTTTCTATTCACTTGTATTCGTTaGATGGAATGTTCCAGGCACAGGCACCAGAGATTG | + |
|
Preference number: 3 (lower is better) Translates to: EELTHFLFTCIR*MECSRHRHQRL Trigger: CAATCTCTGGTGCCTGTGCCTGGAACATTCCATCCAACGAATACAAGTGAATAGAAAGTGAGTGAGCTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR TCA 72 bp | ATGGAATGTTCCAGGCACAGGCACCAGAGATTGTGGTaGAAGAAAGAAGCCAGACGTCTTTCTTCTAATCAC | + |
|
Preference number: 3 (lower is better) Translates to: MECSRHRHQRLW*KKEARRLSSNH Trigger: GTGATTAGAAGAAAGACGTCTGGCTTCTTTCTTTCACCACAATCTCTGGTGCCTGTGCCTGGAACATTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR TCA 72 bp | GCACTGCTCTCAATTGCGGAGATTTGGCTCAAACACTaGGTTTCATTAGTGGTTTGTGGCAACAGCTTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: ALLSIAEIWLKH*VSLVVCGNSLG Trigger: ACCTAAGCTGTTGCCACAAACCACTAATGAAACTCAGTGTTTGAGCCAAATCTCCGCAATTGAGAGCAGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR CCA 72 bp | AGCTCACTCACTTTCTATTCACTTGTATTCGTTGGATaGAATGTTCCAGGCACAGGCACCAGAGATTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SSLTFYSLVFVG*NVPGTGTRDCG Trigger: ACCACAATCTCTGGTGCCTGTGCCTGGAACATTCCATCCAACGAATACAAGTGAATAGAAAGTGAGTGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR GCA 72 bp | AGTCTACATCCTCTCAGCACTTGCACTGCTCTCAATTaGGGAGATTTGGCTCAAACACTGAGTTTCATTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SLHPLSTCTALN*GDLAQTLSFIS Trigger: ACTAATGAAACTCAGTGTTTGAGCCAAATCTCCGCAATTGAGAGCAGTGCAAGTGCTGAGAGGATGTAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR GCA 72 bp | CCCACAGACTGTCACAAACACACAGACTTTGGGTGGTaGGCTATGAATAAGAAAGGATGTTTAAATGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PTDCHKHTDFGW*AMNKKGCLNGE Trigger: CTCTCCATTTAAACATCCTTTCTTATTCATAGCGCACCACCCAAAGTCTGTGTGTTTGTGACAGTCTGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR CCA 72 bp | GTCCCCACAGACTGTCACAAACACACAGACTTTGGGTaGTGCGCTATGAATAAGAAAGGATGTTTAAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: VPTDCHKHTDFG*CAMNKKGCLNG Trigger: TCCATTTAAACATCCTTTCTTATTCATAGCGCACCACCCAAAGTCTGTGTGTTTGTGACAGTCTGTGGGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR TCA 72 bp | CCTCGGCAGAGCTTGGTATTTCTGAGAAAACCCAAATaGTTTCAAATGCAGCTGTTATCACCAATCCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: PRQSLVFLRKPK*FQMQLLSPIHQ Trigger: CTGATGGATTGGTGATAACAGCTGCATTTGAAATCATTTGGGTTTTCTCAGAAATACCAAGCTCTGCCGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| 3UTR GCA 72 bp | ATCAGGGAAAGTATGCCTAATAAGAACTACACCCCTTaGCTATTTCTTTCCAGTACCACCATTCCGTATCAC | + |
|
Preference number: 3 (lower is better) Translates to: IRESMPNKNYTP*LFLSSTTIPYH Trigger: GTGATACGGAATGGTGGTACTGGAAAGAAATAGGCAAGGGGTGTAGTTCTTATTAGGCATACTTTCCCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| 3UTR CCA 72 bp | CTCTGTGATGACCTGTGGCCCAAGACAAACTTTATCTaGCAATCAGGGAAAGTATGCCTAATAAGAACTACA | + |
|
Preference number: 3 (lower is better) Translates to: LCDDLWPKTNFI*QSGKVCLIRTT Trigger: TGTAGTTCTTATTAGGCATACTTTCCCTGATTGCCAGATAAAGTTTGTCTTGGGCCACAGGTCATCACAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| 3UTR GCA 72 bp | GTGAAAACCCATTCTCAAGATGGTTCTATTGTACTTTaGATTCTCAATGAACAGAGCCCATCCTTAGACCTA | + |
|
Preference number: 3 (lower is better) Translates to: VKTHSQDGSIVL*ILNEQSPSLDL Trigger: TAGGTCTAAGGATGGGCTCTGTTCATTGAGAATGCAAAGTACAATAGAACCATCTTGAGAATGGGTTTTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR TCA 72 bp | TGTGGCAACAGCTTAGGTTTGATTGCAGTACATCTGTaGATTTCCTGGTTTGGGTACAATTTTAAAAGTATT | + |
|
Preference number: 3 (lower is better) Translates to: CGNSLGLIAVHL*ISWFGYNFKSI Trigger: AATACTTTTAAAATTGTACCCAAACCAGGAAATTCACAGATGTACTGCAATCAAACCTAAGCTGTTGCCACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| CDS-3UTR GCA 90 bp | CTCGCCCCAGCCCAGTCTACATCCTCTCAGCACTTGCACTGCTCTCAATTGCGGTCCTTCTCGCGCTCTTaGACCATCCTCCGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LAPAQSTSSQHLHCSQLRSFSRS*TILRRA Trigger: GGCCCTGCGGAGGATGGTGCAAGAGCGCGAGAAGGA...CCGCAATTGAGAGCAGTGCAAGTGCTGAGAGGATGTAGACTGGGCTGGGGCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074127.14 |
||
| CDS-3UTR GCA 90 bp | GCTCTCACGAGGGCCTCTTTGCAATGTCACCTCTGTGATGACCTGTGGCCCAAGTCCTTCTCGCGCTCTTaGACCATCCTCCGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALTRASLQCHLCDDLWPKSFSRS*TILRRA Trigger: GGCCCTGCGGAGGATGGTGCAAGAGCGCGAGAAGGA...CTTGGGCCACAGGTCATCACAGAGGTGACATTGCAAAGAGGCCCTCGTGAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| CDS-3UTR CCA 90 bp | ACTCTCAACAGACAGCTGGGGCCTGACCGTCAGTGCTTACTGGACCAGCGCCGTCATTTCCTGCAGCAATaGCTCCCACCAGCGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLNRQLGPDRQCLLDQRRHFLQQ*LPPAVA Trigger: TGCAACCGCTGGTGGGAGCCATTGCTGCAGGAAATG...ACGGCGCTGGTCCAGTAAGCACTGACGGTCAGGCCCCAGCTGTCTGTTGAGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| CDS-3UTR CCA 90 bp | CAGCCAGGCCCCAGCAGCAGGAAGCCAGATCCACACAGATCTCTCTGCCACATCGGGCTAAGTAGCGTGTaGCCTCATCCATCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QPGPSSRKPDPHRSLCHIGLSSV*PHPSLH Trigger: GTGGAGAGATGGATGAGGCCACACGCTACTTAGCCC...GATGTGGCAGAGAGATCTGTGTGGATCTGGCTTCCTGCTGCTGGGGCCTGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074127.14 |
||
| CDS-3UTR CCA 90 bp | GCAGCAGGAAGCCAGATCCACACAGATCTCTCTGCCACATCCCTGCTTAGCCACACGCCCCCATTCCACTaGCACCCACACCTCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAGSQIHTDLSATSLLSHTPPFH*HPHLQR Trigger: CCTTTGGAGGTGTGGGTGCCAGTGGAATGGGGGCGT...GTGGCTAAGCAGGGATGTGGCAGAGAGATCTGTGTGGATCTGGCTTCCTGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| 3UTR CAA 72 bp | AGCTGCCCAGAAAAGGAGGCTCTCACGAGGGCCTCTTaGCAATGTCACCTCTGTGATGACCTGTGGCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCPEKEALTRAS*QCHLCDDLWPK Trigger: CTTGGGCCACAGGTCATCACAGAGGTGACATTGCAAAGAGGCCCTCGTGAGAGCCTCCTTTTCTGGGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| CDS-3UTR CCA 90 bp | GGGCAAAGCTTGACTCAGCAGGCAACCTCTGTCTCAGTCACTCTGGCTGTCTTGGGGCTAAGTAGCGTGTaGCCTCATCCATCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GQSLTQQATSVSVTLAVLGLSSV*PHPSLH Trigger: GTGGAGAGATGGATGAGGCCACACGCTACTTAGCCC...CAAGACAGCCAGAGTGACTGAGACAGAGGTTGCCTGCTGAGTCAAGCTTTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS-3UTR TCA 90 bp | GCCCCAGCAGCAGGAAGCCAGATCCACACAGATCTCTCTGCCACATCCCTGCTTTGGCAGCAGCTTCCATaGCAATTTTTCCAACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: APAAGSQIHTDLSATSLLWQQLP*QFFQLQ Trigger: CTGCAGTTGGAAAAATTGTCATGGAAGCTGCTGCCA...AAGCAGGGATGTGGCAGAGAGATCTGTGTGGATCTGGCTTCCTGCTGCTGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074127.14 |
||
| CDS-3UTR GCA 90 bp | GCTCTCACGAGGGCCTCTTTGCAATGTCACCTCTGTGATGACCTGTGGCCCAAGCTTGACAATCACAGCTaGAACAGCAACCAGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: ALTRASLQCHLCDDLWPKLDNHS*NSNQAH Trigger: GTGTGCCTGGTTGCTGTTGCAGCTGTGATTGTCAAG...CTTGGGCCACAGGTCATCACAGAGGTGACATTGCAAAGAGGCCCTCGTGAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| CDS-3UTR CCA 90 bp | AAGGCACTGGGACAGTCCCCACAGACTGTCACAAACACACAGACTTTGGGTGGTCATTTCCTGCAGCAATaGCTCCCACCAGCGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KALGQSPQTVTNTQTLGGHFLQQ*LPPAVA Trigger: TGCAACCGCTGGTGGGAGCCATTGCTGCAGGAAATG...ACCACCCAAAGTCTGTGTGTTTGTGACAGTCTGTGGGGACTGTCCCAGTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074127.14 |
||
| CDS-3UTR GCA 90 bp | CTCTCAACAGACAGCTGGGGCCTGACCGTCAGTGCTTACTGGACCAGCGCCGTCGAATTAACAGTGAAGTaGATGATGACATCATTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSTDSWGLTVSAYWTSAVELTVK*MMTSLP Trigger: CGGCAATGATGTCATCATGCACTTCACTGTTAATTC...GACGGCGCTGGTCCAGTAAGCACTGACGGTCAGGCCCCAGCTGTCTGTTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| CDS-3UTR GCA 90 bp | AGCTGGAAAGCCTGGGCGGTGTTTGACACTGGAGTGGGCAGAGCTATGGGCTGGCTTCCTTTGTTGAACTaGTTCAGCAGGAAGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SWKAWAVFDTGVGRAMGWLPLLN*FSRKNL Trigger: CAAGTTCTTCCTGCTGAAGCAGTTCAACAAAGGAAG...CCAGCCCATAGCTCTGCCCACTCCAGTGTCAAACACCGCCCAGGCTTTCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| CDS-3UTR TCA 90 bp | TTGGCTTCAAAGTCCTGGGTTAGGGAATCTTCTGGCCTCAGGCTCAGGAACAGCCCAGCCTTCCTTTGTTaGACTGCTTCAGCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LASKSWVRESSGLRLRNSPAFLC*TASAGR Trigger: TCTTCCTGCTGAAGCAGTTCAACAAAGGAAGGCTGG...GCTGTTCCTGAGCCTGAGGCCAGAAGATTCCCTAACCCAGGACTTTGAAGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| CDS-3UTR TCA 90 bp | CTGACCGTCAGTGCTTACTGGACCAGCGCCGTCTATGAACTATCAGAGAAGCCACCAGCCTTCCTTTGTTaGACTGCTTCAGCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTVSAYWTSAVYELSEKPPAFLC*TASAGR Trigger: TCTTCCTGCTGAAGCAGTTCAACAAAGGAAGGCTGG...TGGCTTCTCTGATAGTTCATAGACGGCGCTGGTCCAGTAAGCACTGACGGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| CDS-3UTR GCA 90 bp | GGCACCAGAGATTGTGGTGAAAGAAAGAAGCCAGACGTCTTTCTTCTAATCACATCCTTCTCGCGCTCTTaGACCATCCTCCGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTRDCGERKKPDVFLLITSFSRS*TILRRA Trigger: GGCCCTGCGGAGGATGGTGCAAGAGCGCGAGAAGGA...TGTGATTAGAAGAAAGACGTCTGGCTTCTTTCTTTCACCACAATCTCTGGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS-3UTR GCA 90 bp | CAGCCAGGCCCCAGCAGCAGGAAGCCAGATCCACACAGATCTCTCTGCCACATCGACAATTTTTCCAACTaGAGTGTTCCCTGTATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QPGPSSRKPDPHRSLCHIDNFSN*SVPCIE Trigger: CTCTATACAGGGAACACTGCAGTTGGAAAAATTGTC...GATGTGGCAGAGAGATCTGTGTGGATCTGGCTTCCTGCTGCTGGGGCCTGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074127.14 |
||
| CDS-3UTR GCA 90 bp | CAAAGGCACTGGGACAGTCCCCACAGACTGTCACAAACACACAGACTTTGGGTGCTTGACAATCACAGCTaGAACAGCAACCAGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: QRHWDSPHRLSQTHRLWVLDNHS*NSNQAH Trigger: GTGTGCCTGGTTGCTGTTGCAGCTGTGATTGTCAAG...CACCCAAAGTCTGTGTGTTTGTGACAGTCTGTGGGGACTGTCCCAGTGCCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTCTCAGTCACTCTGGCTGTCTTGTTACAGGACAGAAAGGAGGAGCTCACTCATTTCCTGCAGCAATaGCTCCCACCAGCGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVSVTLAVLLQDRKEELTHFLQQ*LPPAVA Trigger: TGCAACCGCTGGTGGGAGCCATTGCTGCAGGAAATG...AGTGAGCTCCTCCTTTCTGTCCTGTAACAAGACAGCCAGAGTGACTGAGACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGCCACAATGGATGAGATGGACATACCCACCTGCAGTTTTAGTACCTCAACGCCCCCATTCCACTaGCACCCACACCTCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQATMDEMDIPTCSFSTSTPPFH*HPHLQR Trigger: CCTTTGGAGGTGTGGGTGCCAGTGGAATGGGGGCGT...TGAGGTACTAAAACTGCAGGTGGGTATGTCCATCTCATCCATTGTGGCTTGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGCCAGATCCACACAGATCTCTCTGCCACATCCCTGCTTAGCCACACTAGGCCCCTCGGCAGAGCTTaGTATTTCTTGACAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: GSQIHTDLSATSLLSHTRPLGRA*YFLTIT Trigger: TGTGATTGTCAAGAAATACCAAGCTCTGCCGAGGGG...CCTAGTGTGGCTAAGCAGGGATGTGGCAGAGAGATCTGTGTGGATCTGGCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208086.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCTGGAAAGCCTGGGCGGTGTTTGACACTGGAGTGGGCAGAGCTATGGGCTGAATTAACAGTGAAGTaGATGATGACATCATTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SAGKPGRCLTLEWAELWAELTVK*MMTSLP Trigger: CGGCAATGATGTCATCATGCACTTCACTGTTAATTC...AGCCCATAGCTCTGCCCACTCCAGTGTCAAACACCGCCCAGGCTTTCCAGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| CDS-3UTR GCA 90 bp | GGACCAGCGCCGTCTATGAACTATCAGAGAAGCCAACAGGGCTTTTCCCCTCGGCTTCCTTTGTTGAACTaGTTCAGCAGGAAGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPAPSMNYQRSQQGFSPRLPLLN*FSRKNL Trigger: CAAGTTCTTCCTGCTGAAGCAGTTCAACAAAGGAAG...CCGAGGGGAAAAGCCCTGTTGGCTTCTCTGATAGTTCATAGACGGCGCTGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| CDS-3UTR CCA 90 bp | TTTAATCAGGACGCAGGCTTTGCCAGACTCAGCCTAGACACTACTCTTATACATACGCCCCCATTCCACTaGCACCCACACCTCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FNQDAGFARLSLDTTLIHTPPFH*HPHLQR Trigger: CCTTTGGAGGTGTGGGTGCCAGTGGAATGGGGGCGT...ATGTATAAGAGTAGTGTCTAGGCTGAGTCTGGCAAAGCCTGCGTCCTGATTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| 3UTR CAA 72 bp | CAGCAGGCAACCTCTGTCTCAGTCACTCTGGCTGTCTaGTTACAGGACAGAAAGGAGGAGCTCACTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQATSVSVTLAV*LQDRKEELTHF Trigger: AAAGTGAGTGAGCTCCTCCTTTCTGTCCTGTAACAAGACAGCCAGAGTGACTGAGACAGAGGTTGCCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS-3UTR TCA 90 bp | CTGACCGTCAGTGCTTACTGGACCAGCGCCGTCTATGAACTATCAGAGAAGCCAGTTCCAGAACAAACTTaGCAATCACAGCTGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LTVSAYWTSAVYELSEKPVPEQT*QSQLQQ Trigger: CTGTTGCAGCTGTGATTGTCAAGTTTGTTCTGGAAC...TGGCTTCTCTGATAGTTCATAGACGGCGCTGGTCCAGTAAGCACTGACGGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| CDS-3UTR TCA 90 bp | TTGGCTTCAAAGTCCTGGGTTAGGGAATCTTCTGGCCTCAGGCTCAGGAACAGCGAGCTTGGTATTTCTTaGCAATCACAGCTGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LASKSWVRESSGLRLRNSELGIS*QSQLQQ Trigger: CTGTTGCAGCTGTGATTGTCAAGAAATACCAAGCTC...GCTGTTCCTGAGCCTGAGGCCAGAAGATTCCCTAACCCAGGACTTTGAAGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208086.2 |
||
| CDS-3UTR GCA 90 bp | AGTTATCGAGTCTCCCTGACTCATCATCGTGGACTGGGATCTAGTGTGACATGTAATGGCAGCATTTCCTaGAGCAATGGCTCCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SYRVSLTHHRGLGSSVTCNGSIS*SNGSHQ Trigger: CTGGTGGGAGCCATTGCTGCAGGAAATGCTGCCATT...ACATGTCACACTAGATCCCAGTCCACGATGATGAGTCAGGGAGACTCGATAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074127.14 |
||
| CDS-3UTR GCA 90 bp | CCTACCTCACTCTCAACAGACAGCTGGGGCCTGACCGTCAGTGCTTACTGGACCCCAAAAATTTCTTCTTaGATCACCTTGGAGTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PTSLSTDSWGLTVSAYWTPKISS*ITLELG Trigger: TCCTAACTCCAAGGTGATGCAAGAAGAAATTTTTGG...GGTCCAGTAAGCACTGACGGTCAGGCCCCAGCTGTCTGTTGAGAGTGAGGTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| CDS-3UTR CCA 90 bp | CTCTGGCTGTCTTGTTACAGGACAGAAAGGAGGAGCTCACTCACTTTCTATTCATGCTGGCGGTTAAGTTaGCAGGAGACTCCGGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LWLSCYRTERRSSLTFYSCWRLS*QETPVS Trigger: TGACACCGGAGTCTCCTGCCAACTTAACCGCCAGCA...TGAATAGAAAGTGAGTGAGCTCCTCCTTTCTGTCCTGTAACAAGACAGCCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS-3UTR GCA 90 bp | GACACTGGAGTGGGCAGAGCTATGGGCTGGAGGAAAATGAATGGCCAAGGAGCAGAATTAACAGTGAAGTaGATGATGACATCATTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: DTGVGRAMGWRKMNGQGAELTVK*MMTSLP Trigger: CGGCAATGATGTCATCATGCACTTCACTGTTAATTC...TGCTCCTTGGCCATTCATTTTCCTCCAGCCCATAGCTCTGCCCACTCCAGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| CDS-3UTR GCA 90 bp | TGCGCTATGAATAAGAAAGGATGTTTAAATGGAGAGCGGACTCCTGAAGGCCGGCTTGACAATCACAGCTaGAACAGCAACCAGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: CAMNKKGCLNGERTPEGRLDNHS*NSNQAH Trigger: GTGTGCCTGGTTGCTGTTGCAGCTGTGATTGTCAAG...CCGGCCTTCAGGAGTCCGCTCTCCATTTAAACATCCTTTCTTATTCATAGCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGGCTGTCTTGTTACAGGACAGAAAGGAGGAGCTCACTCACTTTCTATTCACTGGAGCGGACAGGATaGTTGACAATCACAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LWLSCYRTERRSSLTFYSLERTG*LTITAA Trigger: TGCAGCTGTGATTGTCAAGCATCCTGTCCGCTCCAG...TGAATAGAAAGTGAGTGAGCTCCTCCTTTCTGTCCTGTAACAAGACAGCCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS-3UTR CCA 90 bp | TGTTTGCTGTGTAAATGTGTAATAAACTGCTTTCAGACTCTAGTGGTTTGGGGCACGCCCCCATTCCACTaGCACCCACACCTCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLLCKCVINCFQTLVVWGTPPFH*HPHLQR Trigger: CCTTTGGAGGTGTGGGTGCCAGTGGAATGGGGGCGT...GCCCCAAACCACTAGAGTCTGAAAGCAGTTTATTACACATTTACACAGCAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS-3UTR TCA 90 bp | GGAAGCCAGATCCACACAGATCTCTCTGCCACATCCCTGCTTAGCCACACTAGGTGTAACCTCTTAAAGTaGCGAAGATTGATGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSQIHTDLSATSLLSHTRCNLLK*RRLMIL Trigger: AAGGATCATCAATCTTCGTCACTTTAAGAGGTTACA...CCTAGTGTGGCTAAGCAGGGATGTGGCAGAGAGATCTGTGTGGATCTGGCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074127.14 |
||
| CDS-3UTR TCA 90 bp | GATACTTCAGGAGAGGCAACAAGGAAGTCATTACAGCTGATCCTCACTCTCAACCCAGCCTTCCTTTGTTaGACTGCTTCAGCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DTSGEATRKSLQLILTLNPAFLC*TASAGR Trigger: TCTTCCTGCTGAAGCAGTTCAACAAAGGAAGGCTGG...GTTGAGAGTGAGGATCAGCTGTAATGACTTCCTTGTTGCCTCTCCTGAAGTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208086.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGGCTGTCTTGTTACAGGACAGAAAGGAGGAGCTCACTCACTTTCTATTCACTTGACAATCACAGCTaGAACAGCAACCAGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LWLSCYRTERRSSLTFYSLDNHS*NSNQAH Trigger: GTGTGCCTGGTTGCTGTTGCAGCTGTGATTGTCAAG...TGAATAGAAAGTGAGTGAGCTCCTCCTTTCTGTCCTGTAACAAGACAGCCAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS-3UTR GCA 90 bp | AACAGTAGCTGGGAGGACCTAGCCTCAGCTCTCAAGATAACAGAGGTCAGCTGGCCAAAAATTTCTTCTTaGATCACCTTGGAGTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NSSWEDLASALKITEVSWPKISS*ITLELG Trigger: TCCTAACTCCAAGGTGATGCAAGAAGAAATTTTTGG...CCAGCTGACCTCTGTTATCTTGAGAGCTGAGGCTAGGTCCTCCCAGCTACTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074127.14 |
||
| CDS-3UTR GCA 90 bp | CTGCTTTGTTTCAACTCTGTAACCATGCGTGGAAGGCACAGCTCCCAGAAAGCTCTTCCTTTGTTGAACTaGTTCAGCAGGAAGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLCFNSVTMRGRHSSQKALPLLN*FSRKNL Trigger: CAAGTTCTTCCTGCTGAAGCAGTTCAACAAAGGAAG...AGCTTTCTGGGAGCTGTGCCTTCCACGCATGGTTACAGAGTTGAAACAAAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR CAA 72 bp | GGAGGAGCTCACTCACTTTCTATTCACTTGTATTCGTaGGATGGAATGTTCCAGGCACAGGCACCAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: GGAHSLSIHLYS*DGMFQAQAPEI Trigger: AATCTCTGGTGCCTGTGCCTGGAACATTCCATCCAACGAATACAAGTGAATAGAAAGTGAGTGAGCTCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR CAA 72 bp | GGACAGAAAGGAGGAGCTCACTCACTTTCTATTCACTaGTATTCGTTGGATGGAATGTTCCAGGCACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQKGGAHSLSIH*YSLDGMFQAQA Trigger: TGCCTGTGCCTGGAACATTCCATCCAACGAATACAAGTGAATAGAAAGTGAGTGAGCTCCTCCTTTCTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR CAA 72 bp | CCTCTCAGCACTTGCACTGCTCTCAATTGCGGAGATTaGGCTCAAACACTGAGTTTCATTAGTGGTTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSTCTALNCGD*AQTLSFISGLW Trigger: CCACAAACCACTAATGAAACTCAGTGTTTGAGCCAAATCTCCGCAATTGAGAGCAGTGCAAGTGCTGAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCTGTTGTGATAATTGTCTTGTGGAAACCTTTCCCCAAATGTTTGCTGTGTAGCGGACAGGATGCTTaGCAATCACAGCTGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSVVIIVLWKPFPKCLLCSGQDA*QSQLQQ Trigger: CTGTTGCAGCTGTGATTGTCAAGCATCCTGTCCGCT...ACACAGCAAACATTTGGGGAAAGGTTTCCACAAGACAATTATCACAACAGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS-3UTR GCA 90 bp | TGCGCTATGAATAAGAAAGGATGTTTAAATGGAGAGCGGACTCCTGAAGGCCGGCTTCCTTTGTTGAACTaGTTCAGCAGGAAGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CAMNKKGCLNGERTPEGRLPLLN*FSRKNL Trigger: CAAGTTCTTCCTGCTGAAGCAGTTCAACAAAGGAAG...CCGGCCTTCAGGAGTCCGCTCTCCATTTAAACATCCTTTCTTATTCATAGCGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| CDS-3UTR TCA 90 bp | AACCCTGAGCATTGTCTAGACCCTAGTCATGAGCTTTGTCTGTCAGTGAAAACCCATGACTGTATGCATTaGGTTCACTTTTGCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NPEHCLDPSHELCLSVKTHDCMH*VHFCSG Trigger: ACCTGAGCAAAAGTGAACTCAATGCATACAGTCATG...GGTTTTCACTGACAGACAAAGCTCATGACTAGGGTCTAGACAATGCTCAGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS-3UTR TCA 90 bp | GATGGTTCTATTGTACTTTGCATTCTCAATGAACAGAGCCCATCCTTAGACCTACCAGCCTTCCTTTGTTaGACTGCTTCAGCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DGSIVLCILNEQSPSLDLPAFLC*TASAGR Trigger: TCTTCCTGCTGAAGCAGTTCAACAAAGGAAGGCTGG...TAGGTCTAAGGATGGGCTCTGTTCATTGAGAATGCAAAGTACAATAGAACCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS-3UTR GCA 90 bp | TCTCAAGATGGTTCTATTGTACTTTGCATTCTCAATGAACAGAGCCCATCCTTAAATGGCAGCATTTCCTaGAGCAATGGCTCCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQDGSIVLCILNEQSPSLNGSIS*SNGSHQ Trigger: CTGGTGGGAGCCATTGCTGCAGGAAATGCTGCCATT...TAAGGATGGGCTCTGTTCATTGAGAATGCAAAGTACAATAGAACCATCTTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS-3UTR GCA 90 bp | GGCACAGGCACCAGAGATTGTGGTGAAAGAAAGAAGCCAGACGTCTTTCTTCTAGAATTAACAGTGAAGTaGATGATGACATCATTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GTGTRDCGERKKPDVFLLELTVK*MMTSLP Trigger: CGGCAATGATGTCATCATGCACTTCACTGTTAATTC...TAGAAGAAAGACGTCTGGCTTCTTTCTTTCACCACAATCTCTGGTGCCTGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS-3UTR TCA 90 bp | TTTGGGTGGTGCGCTATGAATAAGAAAGGATGTTTAAATGGAGAGCGGACTCCTCATGACTGTATGCATTaGGTTCACTTTTGCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FGWCAMNKKGCLNGERTPHDCMH*VHFCSG Trigger: ACCTGAGCAAAAGTGAACTCAATGCATACAGTCATG...AGGAGTCCGCTCTCCATTTAAACATCCTTTCTTATTCATAGCGCACCACCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074127.14 |
||
| CDS-3UTR TCA 90 bp | AGCTCTGTTGTGATAATTGTCTTGTGGAAACCTTTCCCCAAATGTTTGCTGTGTTGGCAGCAGCTTCCATaGCAATTTTTCCAACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSVVIIVLWKPFPKCLLCWQQLP*QFFQLQ Trigger: CTGCAGTTGGAAAAATTGTCATGGAAGCTGCTGCCA...ACACAGCAAACATTTGGGGAAAGGTTTCCACAAGACAATTATCACAACAGAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS-3UTR TCA 90 bp | TGCAATGTCACCTCTGTGATGACCTGTGGCCCAAGACAAACTTTATCTGGCAATTGTAACCTCTTAAAGTaGCGAAGATTGATGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CNVTSVMTCGPRQTLSGNCNLLK*RRLMIL Trigger: AAGGATCATCAATCTTCGTCACTTTAAGAGGTTACA...ATTGCCAGATAAAGTTTGTCTTGGGCCACAGGTCATCACAGAGGTGACATTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| CDS-3UTR GCA 90 bp | TTTAATCAGGACGCAGGCTTTGCCAGACTCAGCCTAGACACTACTCTTATACATGACAATTTTTCCAACTaGAGTGTTCCCTGTATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FNQDAGFARLSLDTTLIHDNFSN*SVPCIE Trigger: CTCTATACAGGGAACACTGCAGTTGGAAAAATTGTC...ATGTATAAGAGTAGTGTCTAGGCTGAGTCTGGCAAAGCCTGCGTCCTGATTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| CDS-3UTR GCA 90 bp | CCTGAGCATTGTCTAGACCCTAGTCATGAGCTTTGTCTGTCAGTGAAAACCCATCCAAAAATTTCTTCTTaGATCACCTTGGAGTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PEHCLDPSHELCLSVKTHPKISS*ITLELG Trigger: TCCTAACTCCAAGGTGATGCAAGAAGAAATTTTTGG...ATGGGTTTTCACTGACAGACAAAGCTCATGACTAGGGTCTAGACAATGCTCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR CAA 72 bp | GGAGATTTGGCTCAAACACTGAGTTTCATTAGTGGTTaGTGGCAACAGCTTAGGTTTGATTGCAGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: GDLAQTLSFISG*WQQLRFDCSTS Trigger: AGATGTACTGCAATCAAACCTAAGCTGTTGCCACAAACCACTAATGAAACTCAGTGTTTGAGCCAAATCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| CDS-3UTR TCA 90 bp | CTTATACATTTCTCTCAGATTACCAGGACCCATCCATGTCCCTTTAAAATGATGCATGACTGTATGCATTaGGTTCACTTTTGCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LIHFSQITRTHPCPFKMMHDCMH*VHFCSG Trigger: ACCTGAGCAAAAGTGAACTCAATGCATACAGTCATG...CATCATTTTAAAGGGACATGGATGGGTCCTGGTAATCTGAGAGAAATGTATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| CDS-3UTR GCA 90 bp | AGCTCTGTTGTGATAATTGTCTTGTGGAAACCTTTCCCCAAATGTTTGCTGTGTGACAATTTTTCCAACTaGAGTGTTCCCTGTATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSVVIIVLWKPFPKCLLCDNFSN*SVPCIE Trigger: CTCTATACAGGGAACACTGCAGTTGGAAAAATTGTC...ACACAGCAAACATTTGGGGAAAGGTTTCCACAAGACAATTATCACAACAGAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR CAA 72 bp | ATAACAACCCATTCTTACTCAATAAAGACTCGTCCTTaGCAAAGGAGTTTCCATGTAGCCACATCTAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITTHSYSIKTRP*QRSFHVATSKA Trigger: AGCTTTAGATGTGGCTACATGGAAACTCCTTTGCAAAGGACGAGTCTTTATTGAGTAAGAATGGGTTGTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS-3UTR TCA 90 bp | AAGAAAGAAGCCAGACGTCTTTCTTCTAATCACACTATCTGTATTTGGTCAGCATGTAACCTCTTAAAGTaGCGAAGATTGATGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KKEARRLSSNHTICIWSACNLLK*RRLMIL Trigger: AAGGATCATCAATCTTCGTCACTTTAAGAGGTTACA...TGCTGACCAAATACAGATAGTGTGATTAGAAGAAAGACGTCTGGCTTCTTTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| 3UTR CAA 72 bp | GTGATAATTGTCTTGTGGAAACCTTTCCCCAAATGTTaGCTGTGTAAATGTGTAATAAACTGCTTTCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VIIVLWKPFPKC*LCKCVINCFQT Trigger: AGTCTGAAAGCAGTTTATTACACATTTACACAGCAAACATTTGGGGAAAGGTTTCCACAAGACAATTATCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS GCA 90 bp | TCCTTCTCGCGCTCTTGCACCATCCTCCGCAGGGCCTCAAGCTGCTaGAATCGGAAGCGCAGCGGCCGAGATCGGCCGGACCGGAACGCC | + |
|
Preference number: 5 (lower is better) Translates to: SFSRSCTILRRASSC*NRKRSGRDRPDRNA Trigger: GGCGTTCCGGTCCGGCCGATCTCGGCCGCTGCGCTTCCGATTGCAGCAGCTTGAGGCCCTGCGGAGGATGGTGCAAGAGCGCGAGAAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
||
| CDS GCA 90 bp | ATTTCCTTCTCGCGCTCTTGCACCATCCTCCGCAGGGCCTCAAGCTaGTGCAATCGGAAGCGCAGCGGCCGAGATCGGCCGGACCGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISFSRSCTILRRASS*CNRKRSGRDRPDRN Trigger: GTTCCGGTCCGGCCGATCTCGGCCGCTGCGCTTCCGATTGCAGCAGCTTGAGGCCCTGCGGAGGATGGTGCAAGAGCGCGAGAAGGAAAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
||
| CDS GCA 90 bp | CTCAGGTCTGCCGCGATGGCTGCTAAGATTTCCTTCTCGCGCTCTTaGACCATCCTCCGCAGGGCCTCAAGCTGCTGCAATCGGAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRSAAMAAKISFSRS*TILRRASSCCNRKR Trigger: GCGCTTCCGATTGCAGCAGCTTGAGGCCCTGCGGAGGATGGTGCAAGAGCGCGAGAAGGAAATCTTAGCAGCCATCGCGGCAGACCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
||
| CDS-3UTR CAA 90 bp | TTAGGTCATCACAAAGGCACTGGGACAGTCCCCACAGACTGTCACAAACACACATTCCTTCTCGCGCTCTaGCACCATCCTCCGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGHHKGTGTVPTDCHKHTFLLAL*HHPPQG Trigger: GCCCTGCGGAGGATGGTGCAAGAGCGCGAGAAGGAA...TGTGTGTTTGTGACAGTCTGTGGGGACTGTCCCAGTGCCTTTGTGATGACCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074127.14 |
||
| CDS-3UTR CAA 90 bp | CTGACTCATCATCGTGGACTGGGATCTAGTGTGACATGTTCTCGCCCCAGCCCATTCAGCAGGAAGAACTaGGCCCAGCTGACCTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LTHHRGLGSSVTCSRPSPFSRKN*AQLTLD Trigger: GTCCAAGGTCAGCTGGGCCAAGTTCTTCCTGCTGAA...TGGGCTGGGGCGAGAACATGTCACACTAGATCCCAGTCCACGATGATGAGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCAACAGACAGCTGGGGCCTGACCGTCAGTGCTTACTGGACCAGCGCCGTCTCTTCTTGCATCACCTaGGAGTTAGGATCAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: LSTDSWGLTVSAYWTSAVSSCIT*ELGSTS Trigger: AGATGTTGATCCTAACTCCAAGGTGATGCAAGAAGA...GACGGCGCTGGTCCAGTAAGCACTGACGGTCAGGCCCCAGCTGTCTGTTGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| CDS-3UTR CAA 90 bp | CTTCAAAGTCCTGGGTTAGGGAATCTTCTGGCCTCAGGCTCAGGAACAGCTGTGTTCAGCAGGAAGAACTaGGCCCAGCTGACCTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LQSPGLGNLLASGSGTAVFSRKN*AQLTLD Trigger: GTCCAAGGTCAGCTGGGCCAAGTTCTTCCTGCTGAA...CACAGCTGTTCCTGAGCCTGAGGCCAGAAGATTCCCTAACCCAGGACTTTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074127.14 ENSMUST00000208086.2 |
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| CDS GCA 90 bp | CCACTGGCACCCACACCTCCAAAGGGCAGAGAATTAACAGTGAAGTaGATGATGACATCATTGCCGGTGACTCCACCACTGGAGGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PLAPTPPKGRELTVK*MMTSLPVTPPLEVS Trigger: TGAGACCTCCAGTGGTGGAGTCACCGGCAATGATGTCATCATGCACTTCACTGTTAATTCTCTGCCCTTTGGAGGTGTGGGTGCCAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
||
| CDS-3UTR CAA 90 bp | CTTTGTTTCAACTCTGTAACCATGCGTGGAAGGCACAGCTCCCAGAAAGCTTTTTTCCTTCTCGCGCTCTaGCACCATCCTCCGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LCFNSVTMRGRHSSQKAFFLLAL*HHPPQG Trigger: GCCCTGCGGAGGATGGTGCAAGAGCGCGAGAAGGAA...AAAAGCTTTCTGGGAGCTGTGCCTTCCACGCATGGTTACAGAGTTGAAACAAAG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
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| CDS-3UTR CAA 90 bp | CGTCAGCTAATAGAAACAACTAAAACCAAACAGAACCTAGCCTGGCCCACCTCATTCCTTCTCGCGCTCTaGCACCATCCTCCGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RQLIETTKTKQNLAWPTSFLLAL*HHPPQG Trigger: GCCCTGCGGAGGATGGTGCAAGAGCGCGAGAAGGAA...TGAGGTGGGCCAGGCTAGGTTCTGTTTGGTTTTAGTTGTTTCTATTAGCTGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| CDS-3UTR CAA 90 bp | AGCTGGAAAGCCTGGGCGGTGTTTGACACTGGAGTGGGCAGAGCTATGGGCTGGTCTTCTTGCATCACCTaGGAGTTAGGATCAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: SWKAWAVFDTGVGRAMGWSSCIT*ELGSTS Trigger: AGATGTTGATCCTAACTCCAAGGTGATGCAAGAAGA...CCAGCCCATAGCTCTGCCCACTCCAGTGTCAAACACCGCCCAGGCTTTCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074127.14 |
||
| CDS TCA 90 bp | AGGGAGGAGTTCAGCCAAGATCTTGGCCGTGTTTTCACTGAGTTCTaGGGGCTTAACAATGGCAGCATTTCCTGCAGCAATGGCTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: REEFSQDLGRVFTEF*GLNNGSISCSNGSH Trigger: GTGGGAGCCATTGCTGCAGGAAATGCTGCCATTGTTAAGCCCTCAGAACTCAGTGAAAACACGGCCAAGATCTTGGCTGAACTCCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
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| CDS-3UTR CAA 90 bp | TCTCAGTCACTCTGGCTGTCTTGTTACAGGACAGAAAGGAGGAGCTCACTCACTTTCAGCAGGAAGAACTaGGCCCAGCTGACCTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SQSLWLSCYRTERRSSLTFSRKN*AQLTLD Trigger: GTCCAAGGTCAGCTGGGCCAAGTTCTTCCTGCTGAA...AGTGAGTGAGCTCCTCCTTTCTGTCCTGTAACAAGACAGCCAGAGTGACTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS TCA 90 bp | GAGAAGCCAACAGGGCTTTTCCCCTCGGCAGAGCTTGGTATTTCTTaGCAATCACAGCTGCAACAGCAACCAGGCACACAAACAACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EKPTGLFPSAELGIS*QSQLQQQPGTQTTA Trigger: TGCTGTTGTTTGTGTGCCTGGTTGCTGTTGCAGCTGTGATTGTCAAGAAATACCAAGCTCTGCCGAGGGGAAAAGCCCTGTTGGCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208086.2 |
||
| CDS-3UTR CAA 90 bp | CACACACAGAAGGAAAATAGGAAACTCCTACCTCACTCTCAACAGACAGCTGGGTTCAGCAGGAAGAACTaGGCCCAGCTGACCTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HTQKENRKLLPHSQQTAGFSRKN*AQLTLD Trigger: GTCCAAGGTCAGCTGGGCCAAGTTCTTCCTGCTGAA...CCCAGCTGTCTGTTGAGAGTGAGGTAGGAGTTTCCTATTTTCCTTCTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| CDS TCA 90 bp | GGGATACCGCCATTAACAATCGCATACAGGTCCTGGTCTAAGTACTaGGGGAGGAGTTCAGCCAAGATCTTGGCCGTGTTTTCACTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GIPPLTIAYRSWSKY*GRSSAKILAVFSLS Trigger: ACTCAGTGAAAACACGGCCAAGATCTTGGCTGAACTCCTCCCTCAGTACTTAGACCAGGACCTGTATGCGATTGTTAATGGCGGTATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
||
| CDS GCA 90 bp | TGCAGGTTTGACCACAATTCATGTACTTTCCCCAGGCTATGCGTCTaGAAGCCACGTCCAGATCACAGTCTCTGTCAATGTAACAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CRFDHNSCTFPRLCV*KPRPDHSLCQCNKG Trigger: GCCCTTGTTACATTGACAGAGACTGTGATCTGGACGTGGCTTGCAGACGCATAGCCTGGGGAAAGTACATGAATTGTGGTCAAACCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
||
| CDS GCA 90 bp | GAGCAATGCAGGTTTGACCACAATTCATGTACTTTCCCCAGGCTATaGGTCTGCAAGCCACGTCCAGATCACAGTCTCTGTCAATGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: EQCRFDHNSCTFPRL*VCKPRPDHSLCQCN Trigger: GTTACATTGACAGAGACTGTGATCTGGACGTGGCTTGCAGACGCATAGCCTGGGGAAAGTACATGAATTGTGGTCAAACCTGCATTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
||
| CDS-3UTR CAA 90 bp | TTGGCTTCAAAGTCCTGGGTTAGGGAATCTTCTGGCCTCAGGCTCAGGAACAGCAGGAGCAATGCAGGTTaGACCACAATTCATGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: LASKSWVRESSGLRLRNSRSNAG*TTIHVL Trigger: AAGTACATGAATTGTGGTCAAACCTGCATTGCTCCT...GCTGTTCCTGAGCCTGAGGCCAGAAGATTCCCTAACCCAGGACTTTGAAGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074127.14 |
||
| CDS-3UTR CAA 90 bp | TGCAATGTCACCTCTGTGATGACCTGTGGCCCAAGACAAACTTTATCTGGCAATCGTTCCAGAACAAACTaGACAATCACAGCTGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: CNVTSVMTCGPRQTLSGNRSRTN*TITAAT Trigger: TGTTGCAGCTGTGATTGTCAAGTTTGTTCTGGAACG...ATTGCCAGATAAAGTTTGTCTTGGGCCACAGGTCATCACAGAGGTGACATTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108715.3 |
||
| CDS-3UTR CAA 90 bp | AGAAAGAAGCCAGACGTCTTTCTTCTAATCACACTATCTGTATTTGGTCAGCAGAGGAGCAATGCAGGTTaGACCACAATTCATGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: RKKPDVFLLITLSVFGQQRSNAG*TTIHVL Trigger: AAGTACATGAATTGTGGTCAAACCTGCATTGCTCCT...CTGCTGACCAAATACAGATAGTGTGATTAGAAGAAAGACGTCTGGCTTCTTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS-3UTR CAA 90 bp | TGTTTGCTGTGTAAATGTGTAATAAACTGCTTTCAGACTCTAGTGGTTTGGGGCTCTTCTTGCATCACCTaGGAGTTAGGATCAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: CLLCKCVINCFQTLVVWGSSCIT*ELGSTS Trigger: AGATGTTGATCCTAACTCCAAGGTGATGCAAGAAGA...GCCCCAAACCACTAGAGTCTGAAAGCAGTTTATTACACATTTACACAGCAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS GCA 72 bp | TCGCGCTCTTGCACCATCCTCCGCAGGGCCTCAAGCTaGTGCAATCGGAAGCGCAGCGGCCGAGATCGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SRSCTILRRASS*CNRKRSGRDRP Trigger: CGGCCGATCTCGGCCGCTGCGCTTCCGATTGCAGCAGCTTGAGGCCCTGCGGAGGATGGTGCAAGAGCGCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
||
| CDS CAA 90 bp | AGCATCCCCAGCCTTCCTTTGTTGAACTGCTTCAGCAGGAAGAACTaGGCCCAGCTGACCTTGGACTCGCTGTTGGGCGGGTACCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SIPSLPLLNCFSRKN*AQLTLDSLLGGYLS Trigger: GCTCAGGTACCCGCCCAACAGCGAGTCCAAGGTCAGCTGGGCCAAGTTCTTCCTGCTGAAGCAGTTCAACAAAGGAAGGCTGGGGATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 ENSMUST00000208086.2 |
||
| CDS CAA 72 bp | AACTGCTTCAGCAGGAAGAACTTGGCCCAGCTGACCTaGGACTCGCTGTTGGGCGGGTACCTGAGCTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: NCFSRKNLAQLT*DSLLGGYLSLL Trigger: CAACAAGCTCAGGTACCCGCCCAACAGCGAGTCCAAGGTCAGCTGGGCCAAGTTCTTCCTGCTGAAGCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 ENSMUST00000208086.2 |
||
| CDS CAA 72 bp | AGCCTTCCTTTGTTGAACTGCTTCAGCAGGAAGAACTaGGCCCAGCTGACCTTGGACTCGCTGTTGGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLPLLNCFSRKN*AQLTLDSLLGG Trigger: CCCGCCCAACAGCGAGTCCAAGGTCAGCTGGGCCAAGTTCTTCCTGCTGAAGCAGTTCAACAAAGGAAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 ENSMUST00000208086.2 |
||
| CDS CAA 90 bp | CCTTTGTTGAACTGCTTCAGCAGGAAGAACTTGGCCCAGCTGACCTaGGACTCGCTGTTGGGCGGGTACCTGAGCTTGTTGACGCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLLNCFSRKNLAQLT*DSLLGGYLSLLTLS Trigger: GGAAAGCGTCAACAAGCTCAGGTACCCGCCCAACAGCGAGTCCAAGGTCAGCTGGGCCAAGTTCTTCCTGCTGAAGCAGTTCAACAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 ENSMUST00000208086.2 |
||
| CDS TCA 72 bp | GGACAGAGTCTGGGTTCCTGGAGCGGACAGGATGCTTaGCAATCACAGCTGCAACAGCAACCAGGCACACAA | + |
|
Preference number: 6 (lower is better) Translates to: GQSLGSWSGQDA*QSQLQQQPGTQ Trigger: TTGTGTGCCTGGTTGCTGTTGCAGCTGTGATTGTCAAGCATCCTGTCCGCTCCAGGAACCCAGACTCTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
||
| CDS CAA 72 bp | TGGACAGAGTCTGGGTTCCTGGAGCGGACAGGATGCTaGACAATCACAGCTGCAACAGCAACCAGGCACACA | + |
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Preference number: 6 (lower is better) Translates to: WTESGFLERTGC*TITAATATRHT Trigger: TGTGTGCCTGGTTGCTGTTGCAGCTGTGATTGTCAAGCATCCTGTCCGCTCCAGGAACCCAGACTCTGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066277.10 |
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| CDS CAA 72 bp | GGCAGCATTTCCTGCAGCAATGGCTCCCACCAGCGGTaGCATGGTAAGAACGAAAGGGTAATTCCAAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GSISCSNGSHQR*HGKNERVIPSS Trigger: GGAGCTTGGAATTACCCTTTCGTTCTTACCATGCAACCGCTGGTGGGAGCCATTGCTGCAGGAAATGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
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| CDS CAA 72 bp | AGGCACACAAACAACAGCATCCCCAGCCTTCCTTTGTaGAACTGCTTCAGCAGGAAGAACTTGGCCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: RHTNNSIPSLPL*NCFSRKNLAQL Trigger: CAGCTGGGCCAAGTTCTTCCTGCTGAAGCAGTTCAACAAAGGAAGGCTGGGGATGCTGTTGTTTGTGTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 ENSMUST00000208086.2 |
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| CDS CAA 72 bp | ACCAGGCACACAAACAACAGCATCCCCAGCCTTCCTTaGTTGAACTGCTTCAGCAGGAAGAACTTGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: TRHTNNSIPSLP*LNCFSRKNLAQ Trigger: CTGGGCCAAGTTCTTCCTGCTGAAGCAGTTCAACAAAGGAAGGCTGGGGATGCTGTTGTTTGTGTGCCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 ENSMUST00000208086.2 |
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| CDS CAA 90 bp | CTGGAGGGAGGCTTCGCACAGGATATAGTCAGGAGCAATGCAGGTTaGACCACAATTCATGTACTTTCCCCAGGCTATGCGTCTGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: LEGGFAQDIVRSNAG*TTIHVLSPGYASAS Trigger: GCTTGCAGACGCATAGCCTGGGGAAAGTACATGAATTGTGGTCAAACCTGCATTGCTCCTGACTATATCCTGTGCGAAGCCTCCCTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
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| CDS CAA 90 bp | AGAGAAGCCAACAGGGCTTTTCCCCTCGGCAGAGCTTGGTATTTCTaGACAATCACAGCTGCAACAGCAACCAGGCACACAAACAACAGC | + |
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Preference number: 6 (lower is better) Translates to: REANRAFPLGRAWYF*TITAATATRHTNNS Trigger: GCTGTTGTTTGTGTGCCTGGTTGCTGTTGCAGCTGTGATTGTCAAGAAATACCAAGCTCTGCCGAGGGGAAAAGCCCTGTTGGCTTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208086.2 |
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| CDS TCA 72 bp | ACAGGGCTTTTCCCCTCGGCAGAGCTTGGTATTTCTTaGCAATCACAGCTGCAACAGCAACCAGGCACACAA | + |
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Preference number: 6 (lower is better) Translates to: TGLFPSAELGIS*QSQLQQQPGTQ Trigger: TTGTGTGCCTGGTTGCTGTTGCAGCTGTGATTGTCAAGAAATACCAAGCTCTGCCGAGGGGAAAAGCCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208086.2 |
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| CDS GCA 72 bp | GGAGGGAGGCTTCGCACAGGATATAGTCAGGAGCAATaGAGGTTTGACCACAATTCATGTACTTTCCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GGRLRTGYSQEQ*RFDHNSCTFPR Trigger: CCTGGGGAAAGTACATGAATTGTGGTCAAACCTGCATTGCTCCTGACTATATCCTGTGCGAAGCCTCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
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| CDS GCA 72 bp | ACAAACAACAGCATCCCCAGCCTTCCTTTGTTGAACTaGTTCAGCAGGAAGAACTTGGCCCAGCTGACCTTG | + |
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Preference number: 6 (lower is better) Translates to: TNNSIPSLPLLN*FSRKNLAQLTL Trigger: CAAGGTCAGCTGGGCCAAGTTCTTCCTGCTGAAGCAGTTCAACAAAGGAAGGCTGGGGATGCTGTTGTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 ENSMUST00000208086.2 |
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| CDS CCA 72 bp | AGAGAAGCCAACAGGGCTTTTCCCCTCGGCAGAGCTTaGTATTTCTTGACAATCACAGCTGCAACAGCAACC | + |
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Preference number: 6 (lower is better) Translates to: REANRAFPLGRA*YFLTITAATAT Trigger: GGTTGCTGTTGCAGCTGTGATTGTCAAGAAATACCAAGCTCTGCCGAGGGGAAAAGCCCTGTTGGCTTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208086.2 |
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| CDS CAA 72 bp | AACAGGGCTTTTCCCCTCGGCAGAGCTTGGTATTTCTaGACAATCACAGCTGCAACAGCAACCAGGCACACA | + |
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Preference number: 6 (lower is better) Translates to: NRAFPLGRAWYF*TITAATATRHT Trigger: TGTGTGCCTGGTTGCTGTTGCAGCTGTGATTGTCAAGAAATACCAAGCTCTGCCGAGGGGAAAAGCCCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208086.2 |
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| CDS CAA 90 bp | ATGAACTATCAGAGAAGCCAACAGGGCTTTTCCCCTCGGCAGAGCTaGGTATTTCTTGACAATCACAGCTGCAACAGCAACCAGGCACAC | + |
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Preference number: 6 (lower is better) Translates to: MNYQRSQQGFSPRQS*VFLDNHSCNSNQAH Trigger: GTGTGCCTGGTTGCTGTTGCAGCTGTGATTGTCAAGAAATACCAAGCTCTGCCGAGGGGAAAAGCCCTGTTGGCTTCTCTGATAGTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208086.2 |
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| CDS GCA 72 bp | GACCACAATTCATGTACTTTCCCCAGGCTATGCGTCTaGAAGCCACGTCCAGATCACAGTCTCTGTCAATGT | + |
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Preference number: 6 (lower is better) Translates to: DHNSCTFPRLCV*KPRPDHSLCQC Trigger: ACATTGACAGAGACTGTGATCTGGACGTGGCTTGCAGACGCATAGCCTGGGGAAAGTACATGAATTGTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
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| CDS GCA 72 bp | AGGTTTGACCACAATTCATGTACTTTCCCCAGGCTATaGGTCTGCAAGCCACGTCCAGATCACAGTCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: RFDHNSCTFPRL*VCKPRPDHSLC Trigger: ACAGAGACTGTGATCTGGACGTGGCTTGCAGACGCATAGCCTGGGGAAAGTACATGAATTGTGGTCAAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
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| CDS CAA 72 bp | GGCTTCGCACAGGATATAGTCAGGAGCAATGCAGGTTaGACCACAATTCATGTACTTTCCCCAGGCTATGCG | + |
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Preference number: 6 (lower is better) Translates to: GFAQDIVRSNAG*TTIHVLSPGYA Trigger: CGCATAGCCTGGGGAAAGTACATGAATTGTGGTCAAACCTGCATTGCTCCTGACTATATCCTGTGCGAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
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| CDS TCA 72 bp | CCATTAACAATCGCATACAGGTCCTGGTCTAAGTACTaGGGGAGGAGTTCAGCCAAGATCTTGGCCGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: PLTIAYRSWSKY*GRSSAKILAVF Trigger: AAACACGGCCAAGATCTTGGCTGAACTCCTCCCTCAGTACTTAGACCAGGACCTGTATGCGATTGTTAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
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| CDS CAA 90 bp | CTTAACAATGGCAGCATTTCCTGCAGCAATGGCTCCCACCAGCGGTaGCATGGTAAGAACGAAAGGGTAATTCCAAGCTCCAATAATCAG | + |
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Preference number: 6 (lower is better) Translates to: LNNGSISCSNGSHQR*HGKNERVIPSSNNQ Trigger: CTGATTATTGGAGCTTGGAATTACCCTTTCGTTCTTACCATGCAACCGCTGGTGGGAGCCATTGCTGCAGGAAATGCTGCCATTGTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
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| CDS TCA 72 bp | TTCAGCCAAGATCTTGGCCGTGTTTTCACTGAGTTCTaGGGGCTTAACAATGGCAGCATTTCCTGCAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: FSQDLGRVFTEF*GLNNGSISCSN Trigger: ATTGCTGCAGGAAATGCTGCCATTGTTAAGCCCTCAGAACTCAGTGAAAACACGGCCAAGATCTTGGCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
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| CDS CAA 90 bp | TTCCCCATAAAAGTCCTTCACCGTTTCCTTAATCTTCTGTACGATTaGATTCTGGAGGGAGGCTTCGCACAGGATATAGTCAGGAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: FPIKVLHRFLNLLYD*ILEGGFAQDIVRSN Trigger: ATTGCTCCTGACTATATCCTGTGCGAAGCCTCCCTCCAGAATCAAATCGTACAGAAGATTAAGGAAACGGTGAAGGACTTTTATGGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
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| CDS GCA 72 bp | AATCTCTCCAAGGATGGTAATGACTTCATGACTGTATaGATTGAGTTCACTTTTGCTCAGGTCTGCCGCGAT | + |
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Preference number: 6 (lower is better) Translates to: NLSKDGNDFMTV*IEFTFAQVCRD Trigger: ATCGCGGCAGACCTGAGCAAAAGTGAACTCAATGCATACAGTCATGAAGTCATTACCATCCTTGGAGAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
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| CDS TCA 72 bp | ATAAAATCAATCTCTCCAAGGATGGTAATGACTTCATaGCTGTATGCATTGAGTTCACTTTTGCTCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: IKSISPRMVMTS*LYALSSLLLRS Trigger: AGACCTGAGCAAAAGTGAACTCAATGCATACAGTCATGAAGTCATTACCATCCTTGGAGAGATTGATTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066277.10 ENSMUST00000074127.14 ENSMUST00000108715.3 |
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