Pregenerated sensors for ALDH3A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019102Ensembl transcript IDs: ENSMUST00000019246.4, ENSMUST00000108716.8, ENSMUST00000147792.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GGGGGAGGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGCATGGTAGGCCCCCATaGCGCTGTTCCCCACACCCC | + |
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Preference number: 4 (lower is better) Translates to: GGGESLRVVEHAWGSRWEHGRPP*RCSPHP Trigger: GGGGTGTGGGGAACAGCGGCATGGGGGCCTACCATG...CTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACCTCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR GCA 90 bp | GGGGGAGGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGCCAAAGATCTCCTCCTaGATCACCGGGGACTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: GGGESLRVVEHAWGSRWEPKISS*ITGDWG Trigger: CCCCCAGTCCCCGGTGATGCAGGAGGAGATCTTTGG...CTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACCTCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR TCA 90 bp | GGGGGAGGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGGCACCCACCATGGGCTaGATGGTGAGGTTGAATGGG | + |
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Preference number: 4 (lower is better) Translates to: GGGESLRVVEHAWGSRWEAPTMG*MVRLNG Trigger: CCCATTCAACCTCACCATTCAGCCCATGGTGGGTGC...CTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACCTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR TCA 90 bp | GGGGGAGGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGAGCAGGTCTGCCATGTaGTCACTCACTTCCGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GGGESLRVVEHAWGSRWESRSAM*SLTSEG Trigger: GCCCTCGGAAGTGAGTGATCACATGGCAGACCTGCT...CTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACCTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR TCA 90 bp | GGGGGAGGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGCTCCAAGCTCCAAGGTaGCAGGGGTCAGATGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GGGESLRVVEHAWGSRWELQAPR*QGSDAW Trigger: CCAAGCATCTGACCCCTGTCACCTTGGAGCTTGGAG...CTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACCTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR TCA 90 bp | GGGGGAGGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGGGGAGCTATGTATCGTaGAGGCTGATCCCAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: GGGESLRVVEHAWGSRWEGSYVS*RLIPGA Trigger: GGCACCTGGGATCAGCCTTCACGATACATAGCTCCC...CTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACCTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR TCA 90 bp | GGGGGAGGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGCAGGGACACCCCCTTTaGTCACTGGGTACAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGGESLRVVEHAWGSRWEQGHPL*SLGTDP Trigger: AGGATCTGTACCCAGTGATCAAAGGGGGTGTCCCTG...CTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACCTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR GCA 90 bp | GGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGAGAAGCCCAAAGATCTCCTCCTaGATCACCGGGGACTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GESLRVVEHAWGSRWERSPKISS*ITGDWG Trigger: CCCCCAGTCCCCGGTGATGCAGGAGGAGATCTTTGG...GCTTCTCTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR GCA 90 bp | GCAGCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACCATGGTAGGCCCCCATaGCGCTGTTCCCCACACCCC | + |
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Preference number: 4 (lower is better) Translates to: AAGGREARMRLREQFFKDHGRPP*RCSPHP Trigger: GGGGTGTGGGGAACAGCGGCATGGGGGCCTACCATG...GTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGAGAAGCTGCATCACCGGGGACTaGGGGTCCACATCCACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GESLRVVEHAWGSRWERSCITGD*GSTSTR Trigger: CCTAGTGGATGTGGACCCCCAGTCCCCGGTGATGCA...GCTTCTCTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGAGAAGCAATGCCGGGGCATCTTaGCTGGGCTTGGGGGATACC | + |
|
Preference number: 4 (lower is better) Translates to: GESLRVVEHAWGSRWERSNAGAS*LGLGDT Trigger: GGTATCCCCCAAGCCCAGCCAAGATGCCCCGGCATT...GCTTCTCTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR GCA 90 bp | GGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGAGAAGCGGAGAACACATAGAGTaGCAGGGGCTTCTCGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GESLRVVEHAWGSRWERSGEHIE*QGLLAL Trigger: CAGCGCGAGAAGCCCCTGGCACTCTATGTGTTCTCC...GCTTCTCTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR GCA 90 bp | GGGGGAGGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGTCTCGAAGCTTTTCTTaGCATGGTAGGCCCCCATGC | + |
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Preference number: 4 (lower is better) Translates to: GGGESLRVVEHAWGSRWESRSFS*HGRPPC Trigger: GCATGGGGGCCTACCATGGCAAGAAAAGCTTCGAGA...CTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGTCCCAGGTGCCTCCATaGGCTACTTTCTTGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGGESLRVVEHAWGSRWESQVPP*ATFLLS Trigger: TGACAGCAAGAAAGTAGCCCATGGAGGCACCTGGGA...CTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR TCA 90 bp | GGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGAGAAGCTCACTTCCGAGGGCTTaGGGACCACAGCATTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GESLRVVEHAWGSRWERSSLPRA*GPQHFL Trigger: CAGGAAATGCTGTGGTCCTCAAGCCCTCGGAAGTGA...GCTTCTCTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR TCA 90 bp | GGGGGAGGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGGGTCAAACTTCTCTTTaGGCAGCTCCGTGGTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGGESLRVVEHAWGSRWEGQTSL*AAPWFQ Trigger: CTGAAACCACGGAGCTGCTCAAAGAGAAGTTTGACC...CTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACCTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR GCA 90 bp | GCAGCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACTGCAACGCCTCCAGCTaGTCAACCCGGAACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAGGREARMRLREQFFKDCNASS*STRNCS Trigger: GCTGCAGTTCCGGGTTGAGCAGCTGGAGGCGTTGCA...GTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGGGGGCCACACAGGTCTaGCCACTGTTCATAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: GGGESLRVVEHAWGSRWEGATQV*PLFINF Trigger: AAAGTTTATGAACAGTGGCCAGACCTGTGTGGCCCC...CTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACCTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGCCACATCCACTAGGATaGTGGGAGCTATGTATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGGESLRVVEHAWGSRWEPHPLG*WELCIV Trigger: CACGATACATAGCTCCCACCATCCTAGTGGATGTGG...CTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACCTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGAGAAGCAGGCAAGAGCGGCGGTaGGAAAAGGTCTCGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GESLRVVEHAWGSRWERSRQERR*EKVSKL Trigger: AAGCTTCGAGACCTTTTCCCACCGCCGCTCTTGCCT...GCTTCTCTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGAGAAGCCATCTTGGCTGGGCTTaGGGGATACCTGGCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GESLRVVEHAWGSRWERSHLGWA*GIPGLV Trigger: AACAAGGCCAGGTATCCCCCAAGCCCAGCCAAGATG...GCTTCTCTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GCAGCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAATGCCGGGGCATCTTaGCTGGGCTTGGGGGATACC | + |
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Preference number: 4 (lower is better) Translates to: AAGGREARMRLREQFFKDNAGAS*LGLGDT Trigger: GGTATCCCCCAAGCCCAGCCAAGATGCCCCGGCATT...GTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR TCA 90 bp | GCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGGGGAGCTATGTATCGTaGAGGCTGATCCCAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGGREARMRLREQFFKDRGSYVS*RLIPGA Trigger: GGCACCTGGGATCAGCCTTCACGATACATAGCTCCC...CCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGAGAAGCTCCCAGGTGCCTCCATaGGCTACTTTCTTGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: GESLRVVEHAWGSRWERSSQVPP*ATFLLS Trigger: TGACAGCAAGAAAGTAGCCCATGGAGGCACCTGGGA...GCTTCTCTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGACATGCATCACCGGGGACTaGGGGTCCACATCCACTAGG | + |
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Preference number: 4 (lower is better) Translates to: GGREARMRLREQFFKDRTCITGD*GSTSTR Trigger: CCTAGTGGATGTGGACCCCCAGTCCCCGGTGATGCA...TGTCCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR TCA 90 bp | GGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGACAAGCAGGTCTGCCATGTaGTCACTCACTTCCGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GGREARMRLREQFFKDRTSRSAM*SLTSEG Trigger: GCCCTCGGAAGTGAGTGATCACATGGCAGACCTGCT...TGTCCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR TCA 90 bp | GGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGACACTCCAAGCTCCAAGGTaGCAGGGGTCAGATGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GGREARMRLREQFFKDRTLQAPR*QGSDAW Trigger: CCAAGCATCTGACCCCTGTCACCTTGGAGCTTGGAG...TGTCCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR TCA 90 bp | GGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGAGAAGCTGTCAATCAGATTTATaGCCCGCTGGAAGTGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: GESLRVVEHAWGSRWERSCQSDL*PAGSAG Trigger: ACCGGCACTTCCAGCGGGTCATAAATCTGATTGACA...GCTTCTCTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR GCA 90 bp | GCAGCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACTCGTTGATCATGCGCTaGAACGCCTCCAGCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: AAGGREARMRLREQFFKDSLIMR*NASSCS Trigger: TGAGCAGCTGGAGGCGTTGCAGCGCATGATCAACGA...GTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR GCA 90 bp | GGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGACAGGAGAACACATAGAGTaGCAGGGGCTTCTCGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: GGREARMRLREQFFKDRTGEHIE*QGLLAL Trigger: CAGCGCGAGAAGCCCCTGGCACTCTATGTGTTCTCC...TGTCCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGCATTTCCTGCAGCGATaGCACCCACCATGGGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: AGGREARMRLREQFFKDRHFLQR*HPPWAE Trigger: TTCAGCCCATGGTGGGTGCCATCGCTGCAGGAAATG...CCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGAGAAGCGGGGCCACACAGGTCTaGCCACTGTTCATAAACTTT | + |
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Preference number: 4 (lower is better) Translates to: GESLRVVEHAWGSRWERSGATQV*PLFINF Trigger: AAAGTTTATGAACAGTGGCCAGACCTGTGTGGCCCC...GCTTCTCTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GCAGCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACCATCTTGGCTGGGCTTaGGGGATACCTGGCCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: AAGGREARMRLREQFFKDHLGWA*GIPGLV Trigger: AACAAGGCCAGGTATCCCCCAAGCCCAGCCAAGATG...GTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR TCA 90 bp | GGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGAGAAGCTCCACAATTTCATTCTaGATGGAGGGGTCACAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GESLRVVEHAWGSRWERSSTISF*MEGSQR Trigger: CCTCTGTGACCCCTCCATTCAGAATGAAATTGTGGA...GCTTCTCTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR GCA 90 bp | GGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGACATCGTTGATCATGCGCTaGAACGCCTCCAGCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: GGREARMRLREQFFKDRTSLIMR*NASSCS Trigger: TGAGCAGCTGGAGGCGTTGCAGCGCATGATCAACGA...TGTCCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR GCA 90 bp | GCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGTCTCGAAGCTTTTCTTaGCATGGTAGGCCCCCATGC | + |
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Preference number: 4 (lower is better) Translates to: AGGREARMRLREQFFKDRSRSFS*HGRPPC Trigger: GCATGGGGGCCTACCATGGCAAGAAAAGCTTCGAGA...CCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGACACATTTCCTGCAGCGATaGCACCCACCATGGGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: GGREARMRLREQFFKDRTHFLQR*HPPWAE Trigger: TTCAGCCCATGGTGGGTGCCATCGCTGCAGGAAATG...TGTCCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGACAAGGCAAGAGCGGCGGTaGGAAAAGGTCTCGAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: GGREARMRLREQFFKDRTRQERR*EKVSKL Trigger: AAGCTTCGAGACCTTTTCCCACCGCCGCTCTTGCCT...TGTCCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR TCA 90 bp | GCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGGGTCAAACTTCTCTTTaGGCAGCTCCGTGGTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: AGGREARMRLREQFFKDRGQTSL*AAPWFQ Trigger: CTGAAACCACGGAGCTGCTCAAAGAGAAGTTTGACC...CCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR TCA 90 bp | GCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGTCCACAATTTCATTCTaGATGGAGGGGTCACAGAGG | + |
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Preference number: 4 (lower is better) Translates to: AGGREARMRLREQFFKDRSTISF*MEGSQR Trigger: CCTCTGTGACCCCTCCATTCAGAATGAAATTGTGGA...CCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR TCA 90 bp | GGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGACATGTCAATCAGATTTATaGCCCGCTGGAAGTGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: GGREARMRLREQFFKDRTCQSDL*PAGSAG Trigger: ACCGGCACTTCCAGCGGGTCATAAATCTGATTGACA...TGTCCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR TCA 90 bp | GGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGAGAAGCCTGCGATCATTTTCTTaGTCACCTTGTCATTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: GESLRVVEHAWGSRWERSLRSFS*SPCHCW Trigger: CCAACAATGACAAGGTGATCAAGAAAATGATCGCAG...GCTTCTCTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGACCCCCTTTGATCACTaGGTACAGATCCTTGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: AGGREARMRLREQFFKDRTPFDH*VQILVH Trigger: ATGGACAAGGATCTGTACCCAGTGATCAAAGGGGGT...CCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GCAGCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACACCCCCTTTGATCACTaGGTACAGATCCTTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AAGGREARMRLREQFFKDTPFDH*VQILVH Trigger: ATGGACAAGGATCTGTACCCAGTGATCAAAGGGGGT...GTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGACACCACATCCACTAGGATaGTGGGAGCTATGTATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGREARMRLREQFFKDRTPHPLG*WELCIV Trigger: CACGATACATAGCTCCCACCATCCTAGTGGATGTGG...TGTCCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
||
| CDS-3UTR CCA 90 bp | GGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGAGAAGCTCACCTTGTCATTGTTaGAGAACACATAGAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GESLRVVEHAWGSRWERSSPCHC*RTHRVP Trigger: TGGCACTCTATGTGTTCTCCAACAATGACAAGGTGA...GCTTCTCTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGACAAGGGGCTTCTCGCGCTaGTTGATAAATTTAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGREARMRLREQFFKDRTRGFSR*LINLMA Trigger: GGCCATTAAATTTATCAACCAGCGCGAGAAGCCCCT...TGTCCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR TCA 90 bp | GCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGCTGCGATCATTTTCTTaGTCACCTTGTCATTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGGREARMRLREQFFKDRLRSFS*SPCHCW Trigger: CCAACAATGACAAGGTGATCAAGAAAATGATCGCAG...CCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGAATGGTGAGGTTGAATaGGTAGTTCCAAGCACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: AGGREARMRLREQFFKDRNGEVE*VVPSTY Trigger: ATAGGTGCTTGGAACTACCCATTCAACCTCACCATT...CCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CCA 90 bp | GCAGCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACTCACCTTGTCATTGTTaGAGAACACATAGAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AAGGREARMRLREQFFKDSPCHC*RTHRVP Trigger: TGGCACTCTATGTGTTCTCCAACAATGACAAGGTGA...GTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CAA 90 bp | GGGGGAGGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGCAATGCCGGGGCATCTaGGCTGGGCTTGGGGGATAC | + |
|
Preference number: 5 (lower is better) Translates to: GGGESLRVVEHAWGSRWEQCRGI*AGLGGY Trigger: GTATCCCCCAAGCCCAGCCAAGATGCCCCGGCATTG...CTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACCTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS GCA 90 bp | TCGTTGATCATGCGCTGCAACGCCTCCAGCTGCTCAACCCGGAACTaGAGCGGTCGAGTCTTGCCTGAGTTAAAGGCATCACGGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SLIMRCNASSCSTRN*SGRVLPELKASRAR Trigger: CCGGGCCCGTGATGCCTTTAACTCAGGCAAGACTCGACCGCTGCAGTTCCGGGTTGAGCAGCTGGAGGCGTTGCAGCGCATGATCAACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS CCA 90 bp | CCTCCTGCATCACCGGGGACTGGGGGTCCACATCCACTAGGATGGTaGGAGCTATGTATCGTGAAGGCTGATCCCAGGTGCCTCCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPASPGTGGPHPLGW*ELCIVKADPRCLHG Trigger: CCCATGGAGGCACCTGGGATCAGCCTTCACGATACATAGCTCCCACCATCCTAGTGGATGTGGACCCCCAGTCCCCGGTGATGCAGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGAGGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGTCAGGGACACCCCCTTaGATCACTGGGTACAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: GGGESLRVVEHAWGSRWESGTPP*ITGYRS Trigger: GGATCTGTACCCAGTGATCAAAGGGGGTGTCCCTGA...CTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACCTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
||
| CDS GCA 90 bp | GCCAGCGCCTTGGAGATGCCTTTCAAGTTCTCGTTGATCATGCGCTaGAACGCCTCCAGCTGCTCAACCCGGAACTGCAGCGGTCGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASALEMPFKFSLIMR*NASSCSTRNCSGRV Trigger: GACTCGACCGCTGCAGTTCCGGGTTGAGCAGCTGGAGGCGTTGCAGCGCATGATCAACGAGAACTTGAAAGGCATCTCCAAGGCGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGAGGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGTTAGAGGCCAGCGCCTaGGAGATGCCTTTCAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGGESLRVVEHAWGSRWELEASA*EMPFKF Trigger: GAACTTGAAAGGCATCTCCAAGGCGCTGGCCTCTAA...CTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CAA 90 bp | GCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGCAATGCCGGGGCATCTaGGCTGGGCTTGGGGGATAC | + |
|
Preference number: 5 (lower is better) Translates to: AGGREARMRLREQFFKDRQCRGI*AGLGGY Trigger: GTATCCCCCAAGCCCAGCCAAGATGCCCCGGCATTG...CCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
||
| CDS CCA 90 bp | TCTCCTCCTGCATCACCGGGGACTGGGGGTCCACATCCACTAGGATaGTGGGAGCTATGTATCGTGAAGGCTGATCCCAGGTGCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPPASPGTGGPHPLG*WELCIVKADPRCLH Trigger: ATGGAGGCACCTGGGATCAGCCTTCACGATACATAGCTCCCACCATCCTAGTGGATGTGGACCCCCAGTCCCCGGTGATGCAGGAGGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS TCA 90 bp | CGCCTCCAGCTGCTCAACCCGGAACTGCAGCGGTCGAGTCTTGCCTaGGTTAAAGGCATCACGGGCCCGGTTCACGATGCTACTGATATT | + |
|
Preference number: 5 (lower is better) Translates to: RLQLLNPELQRSSLA*VKGITGPVHDATDI Trigger: AATATCAGTAGCATCGTGAACCGGGCCCGTGATGCCTTTAACTCAGGCAAGACTCGACCGCTGCAGTTCCGGGTTGAGCAGCTGGAGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 ENSMUST00000147792.2 |
||
| CDS-3UTR CAA 90 bp | GGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGAGAAGCTTAGAGGCCAGCGCCTaGGAGATGCCTTTCAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GESLRVVEHAWGSRWERSLEASA*EMPFKF Trigger: GAACTTGAAAGGCATCTCCAAGGCGCTGGCCTCTAA...GCTTCTCTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CAA 90 bp | GGGGGAGGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGTGGTCAAACTTCTCTTaGAGCAGCTCCGTGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GGGESLRVVEHAWGSRWEWSNFS*SSSVVS Trigger: TGAAACCACGGAGCTGCTCAAAGAGAAGTTTGACCA...CTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACCTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS GCA 90 bp | CTCCGAGTGGATGTAGAGGTCATCTTCCTGGGTCTGACGAGTCTTTaGCACAGGCTCGTCCTCAGCCCAATCGGAGAGCCCCTTAATCGT | + |
|
Preference number: 5 (lower is better) Translates to: LRVDVEVIFLGLTSL*HRLVLSPIGEPLNR Trigger: ACGATTAAGGGGCTCTCCGATTGGGCTGAGGACGAGCCTGTGGCAAAGACTCGTCAGACCCAGGAAGATGACCTCTACATCCACTCGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS TCA 90 bp | CCGCTGTTCCCCACACCCCCAAAGGGCAAAGTGGGCACAGTGATGTaGACAATGACGTCATTGGCTGTCACTCCACCGCTTGATGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PLFPTPPKGKVGTVM*TMTSLAVTPPLDVS Trigger: AGAGACATCAAGCGGTGGAGTGACAGCCAATGACGTCATTGTTCACATCACTGTGCCCACTTTGCCCTTTGGGGGTGTGGGGAACAGCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CAA 90 bp | GGGGGAGGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGCCATGGGCTACTTTCTaGCTGTCAATCAGATTTATG | + |
|
Preference number: 5 (lower is better) Translates to: GGGESLRVVEHAWGSRWEPWATF*LSIRFM Trigger: CATAAATCTGATTGACAGCAAGAAAGTAGCCCATGG...CTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACCTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS GCA 90 bp | ATGCCTTTCAAGTTCTCGTTGATCATGCGCTGCAACGCCTCCAGCTaGTCAACCCGGAACTGCAGCGGTCGAGTCTTGCCTGAGTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: MPFKFSLIMRCNASS*STRNCSGRVLPELK Trigger: CTTTAACTCAGGCAAGACTCGACCGCTGCAGTTCCGGGTTGAGCAGCTGGAGGCGTTGCAGCGCATGATCAACGAGAACTTGAAAGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CAA 90 bp | GCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGCTGTCACTCCACCGCTaGATGTCTCTGCGATCATTT | + |
|
Preference number: 5 (lower is better) Translates to: AGGREARMRLREQFFKDRLSLHR*MSLRSF Trigger: AAATGATCGCAGAGACATCAAGCGGTGGAGTGACAG...CCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS TCA 90 bp | GGGTCCACATCCACTAGGATGGTGGGAGCTATGTATCGTGAAGGCTaGTCCCAGGTGCCTCCATGGGCTACTTTCTTGCTGTCAATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSTSTRMVGAMYREG*SQVPPWATFLLSIR Trigger: TCTGATTGACAGCAAGAAAGTAGCCCATGGAGGCACCTGGGATCAGCCTTCACGATACATAGCTCCCACCATCCTAGTGGATGTGGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CAA 90 bp | GCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGTGGTCAAACTTCTCTTaGAGCAGCTCCGTGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGGREARMRLREQFFKDRWSNFS*SSSVVS Trigger: TGAAACCACGGAGCTGCTCAAAGAGAAGTTTGACCA...CCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CAA 90 bp | GGGGGAGGTGAGAGCCTTCGGGTAGTTGAGCATGCATGGGGCAGCAGGTGGGAGATTTTCTTGATCACCTaGTCATTGTTGGAGAACACA | + |
|
Preference number: 5 (lower is better) Translates to: GGGESLRVVEHAWGSRWEIFLIT*SLLENT Trigger: TGTGTTCTCCAACAATGACAAGGTGATCAAGAAAAT...CTCCCACCTGCTGCCCCATGCATGCTCAACTACCCGAAGGCTCTCACCTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CAA 90 bp | GGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGACACTGTCACTCCACCGCTaGATGTCTCTGCGATCATTT | + |
|
Preference number: 5 (lower is better) Translates to: GGREARMRLREQFFKDRTLSLHR*MSLRSF Trigger: AAATGATCGCAGAGACATCAAGCGGTGGAGTGACAG...TGTCCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CAA 90 bp | GGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGACACCATGGGCTACTTTCTaGCTGTCAATCAGATTTATG | + |
|
Preference number: 5 (lower is better) Translates to: GGREARMRLREQFFKDRTPWATF*LSIRFM Trigger: CATAAATCTGATTGACAGCAAGAAAGTAGCCCATGG...TGTCCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CAA 90 bp | GCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGTCTGCGATCATTTTCTaGATCACCTTGTCATTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGGREARMRLREQFFKDRSAIIF*ITLSLL Trigger: CAACAATGACAAGGTGATCAAGAAAATGATCGCAGA...CCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CAA 90 bp | GCAGCAGGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACTCTGCGATCATTTTCTaGATCACCTTGTCATTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AAGGREARMRLREQFFKDSAIIF*ITLSLL Trigger: CAACAATGACAAGGTGATCAAGAAAATGATCGCAGA...GTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACCTGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS TCA 90 bp | GATCACTGGGTACAGATCCTTGTCCATATACTGAGGGATAAGTGTTaGAAGCAGGTCTGCCATGTGATCACTCACTTCCGAGGGCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: DHWVQILVHILRDKC*KQVCHVITHFRGLE Trigger: CTCAAGCCCTCGGAAGTGAGTGATCACATGGCAGACCTGCTTTCAACACTTATCCCTCAGTATATGGACAAGGATCTGTACCCAGTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS-3UTR CAA 90 bp | GGTGGGAGAGAAGCCAGGATGAGGCTCCGTGAGCAATTCTTCAAGGACAGGACAATTTTCTTGATCACCTaGTCATTGTTGGAGAACACA | + |
|
Preference number: 5 (lower is better) Translates to: GGREARMRLREQFFKDRTIFLIT*SLLENT Trigger: TGTGTTCTCCAACAATGACAAGGTGATCAAGAAAAT...TGTCCTGTCCTTGAAGAATTGCTCACGGAGCCTCATCCTGGCTTCTCTCCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS TCA 90 bp | CACAGTGATGTGAACAATGACGTCATTGGCTGTCACTCCACCGCTTaGTGTCTCTGCGATCATTTTCTTGATCACCTTGTCATTGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: HSDVNNDVIGCHSTA*CLCDHFLDHLVIVG Trigger: TCCAACAATGACAAGGTGATCAAGAAAATGATCGCAGAGACATCAAGCGGTGGAGTGACAGCCAATGACGTCATTGTTCACATCACTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS CAA 72 bp | TCCAGCTGCTCAACCCGGAACTGCAGCGGTCGAGTCTaGCCTGAGTTAAAGGCATCACGGGCCCGGTTCACG | + |
|
Preference number: 6 (lower is better) Translates to: SSCSTRNCSGRV*PELKASRARFT Trigger: CGTGAACCGGGCCCGTGATGCCTTTAACTCAGGCAAGACTCGACCGCTGCAGTTCCGGGTTGAGCAGCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 ENSMUST00000147792.2 |
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| CDS CAA 90 bp | TGCAACGCCTCCAGCTGCTCAACCCGGAACTGCAGCGGTCGAGTCTaGCCTGAGTTAAAGGCATCACGGGCCCGGTTCACGATGCTACTG | + |
|
Preference number: 6 (lower is better) Translates to: CNASSCSTRNCSGRV*PELKASRARFTMLL Trigger: CAGTAGCATCGTGAACCGGGCCCGTGATGCCTTTAACTCAGGCAAGACTCGACCGCTGCAGTTCCGGGTTGAGCAGCTGGAGGCGTTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 ENSMUST00000147792.2 |
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| CDS TCA 72 bp | CTGCTCAACCCGGAACTGCAGCGGTCGAGTCTTGCCTaGGTTAAAGGCATCACGGGCCCGGTTCACGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLNPELQRSSLA*VKGITGPVHDA Trigger: AGCATCGTGAACCGGGCCCGTGATGCCTTTAACTCAGGCAAGACTCGACCGCTGCAGTTCCGGGTTGAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 ENSMUST00000147792.2 |
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| CDS CCA 72 bp | TCACCGGGGACTGGGGGTCCACATCCACTAGGATGGTaGGAGCTATGTATCGTGAAGGCTGATCCCAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPGTGGPHPLGW*ELCIVKADPRC Trigger: GCACCTGGGATCAGCCTTCACGATACATAGCTCCCACCATCCTAGTGGATGTGGACCCCCAGTCCCCGGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS CCA 72 bp | GCATCACCGGGGACTGGGGGTCCACATCCACTAGGATaGTGGGAGCTATGTATCGTGAAGGCTGATCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ASPGTGGPHPLG*WELCIVKADPR Trigger: CCTGGGATCAGCCTTCACGATACATAGCTCCCACCATCCTAGTGGATGTGGACCCCCAGTCCCCGGTGATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
||
| CDS CAA 90 bp | CGCAGGTTAGAGGCCAGCGCCTTGGAGATGCCTTTCAAGTTCTCGTaGATCATGCGCTGCAACGCCTCCAGCTGCTCAACCCGGAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRLEASALEMPFKFS*IMRCNASSCSTRNC Trigger: GCAGTTCCGGGTTGAGCAGCTGGAGGCGTTGCAGCGCATGATCAACGAGAACTTGAAAGGCATCTCCAAGGCGCTGGCCTCTAACCTGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
||
| CDS TCA 72 bp | AGGCCAGCGCCTTGGAGATGCCTTTCAAGTTCTCGTTaGTCATGCGCTGCAACGCCTCCAGCTGCTCAACCC | + |
|
Preference number: 6 (lower is better) Translates to: RPAPWRCLSSSR*SCAATPPAAQP Trigger: GGGTTGAGCAGCTGGAGGCGTTGCAGCGCATGATCAACGAGAACTTGAAAGGCATCTCCAAGGCGCTGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
||
| CDS GCA 72 bp | ATGCGCTGCAACGCCTCCAGCTGCTCAACCCGGAACTaGAGCGGTCGAGTCTTGCCTGAGTTAAAGGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: MRCNASSCSTRN*SGRVLPELKAS Trigger: TGATGCCTTTAACTCAGGCAAGACTCGACCGCTGCAGTTCCGGGTTGAGCAGCTGGAGGCGTTGCAGCGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
||
| CDS GCA 72 bp | AAGTTCTCGTTGATCATGCGCTGCAACGCCTCCAGCTaGTCAACCCGGAACTGCAGCGGTCGAGTCTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: KFSLIMRCNASS*STRNCSGRVLP Trigger: AGGCAAGACTCGACCGCTGCAGTTCCGGGTTGAGCAGCTGGAGGCGTTGCAGCGCATGATCAACGAGAACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
||
| CDS CAA 72 bp | GAGGCCAGCGCCTTGGAGATGCCTTTCAAGTTCTCGTaGATCATGCGCTGCAACGCCTCCAGCTGCTCAACC | + |
|
Preference number: 6 (lower is better) Translates to: EASALEMPFKFS*IMRCNASSCST Trigger: GGTTGAGCAGCTGGAGGCGTTGCAGCGCATGATCAACGAGAACTTGAAAGGCATCTCCAAGGCGCTGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
||
| CDS TCA 72 bp | CCCACACCCCCAAAGGGCAAAGTGGGCACAGTGATGTaGACAATGACGTCATTGGCTGTCACTCCACCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PTPPKGKVGTVM*TMTSLAVTPPL Trigger: AAGCGGTGGAGTGACAGCCAATGACGTCATTGTTCACATCACTGTGCCCACTTTGCCCTTTGGGGGTGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
||
| CDS GCA 72 bp | TTGGAGATGCCTTTCAAGTTCTCGTTGATCATGCGCTaGAACGCCTCCAGCTGCTCAACCCGGAACTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LEMPFKFSLIMR*NASSCSTRNCS Trigger: GCTGCAGTTCCGGGTTGAGCAGCTGGAGGCGTTGCAGCGCATGATCAACGAGAACTTGAAAGGCATCTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS TCA 72 bp | TCCACTAGGATGGTGGGAGCTATGTATCGTGAAGGCTaGTCCCAGGTGCCTCCATGGGCTACTTTCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: STRMVGAMYREG*SQVPPWATFLL Trigger: CAGCAAGAAAGTAGCCCATGGAGGCACCTGGGATCAGCCTTCACGATACATAGCTCCCACCATCCTAGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS CAA 72 bp | GTGCTCCCTGTGTACATGATGTGGTCAAACTTCTCTTaGAGCAGCTCCGTGGTTTCAGGGACACCCCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: VLPVYMMWSNFS*SSSVVSGTPPL Trigger: CAAAGGGGGTGTCCCTGAAACCACGGAGCTGCTCAAAGAGAAGTTTGACCACATCATGTACACAGGGAGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS GCA 72 bp | TGGTGGGAGCTATGTATCGTGAAGGCTGATCCCAGGTaGCTCCATGGGCTACTTTCTTGCTGTCAATCAGAT | + |
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Preference number: 6 (lower is better) Translates to: WWELCIVKADPR*LHGLLSCCQSD Trigger: ATCTGATTGACAGCAAGAAAGTAGCCCATGGAGGCACCTGGGATCAGCCTTCACGATACATAGCTCCCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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| CDS CCA 72 bp | CAGCTCCGTGGTTTCAGGGACACCCCCTTTGATCACTaGGTACAGATCCTTGTCCATATACTGAGGGATAAG | + |
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Preference number: 6 (lower is better) Translates to: QLRGFRDTPFDH*VQILVHILRDK Trigger: CTTATCCCTCAGTATATGGACAAGGATCTGTACCCAGTGATCAAAGGGGGTGTCCCTGAAACCACGGAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019246.4 ENSMUST00000108716.8 |
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