Pregenerated sensors for ALDH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029455Ensembl transcript IDs: ENSMUST00000031411.15, ENSMUST00000129753.8, ENSMUST00000152945.3, ENSMUST00000199369.5, ENSMUST00000200541.5
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTAACGGTGATGAAGCAGGCGCTGAGCAGTTGTTTATGCTCAGCCTaGGCTCTCACCGTCACAGCTCAGGAAGGGAGCCCATCACCCGCT | + |
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Preference number: 1 (lower is better) Translates to: LTVMKQALSSCLCSA*ALTVTAQEGSPSPA Trigger: AGCGGGTGATGGGCTCCCTTCCTGAGCTGTGACGGTGAGAGCCCAGGCTGAGCATAAACAACTGCTCAGCGCCTGCTTCATCACCGTTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
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| 3UTR TCA 90 bp | GCCTGTGATGGCAGCTTGCTCTCCACGCCTTGTTCACTCACTAGGTaGGTAAGATCTGTGACCTTCGCCCCTAAGCTTCCCAGCTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: ACDGSLLSTPCSLTR*VRSVTFAPKLPSSC Trigger: ACAGGAGCTGGGAAGCTTAGGGGCGAAGGTCACAGATCTTACTCACCTAGTGAGTGAACAAGGCGTGGAGAGCAAGCTGCCATCACAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR GCA 90 bp | GGTAGTTCGAGAGGCAGACCTTGCACTGTGCACATGACATGGCTCTaGTCTGCTCTGTGCCTCAAAGAGGCCGCAGAACAGATTGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: GSSRGRPCTVHMTWL*SALCLKEAAEQIGR Trigger: TCTCCCAATCTGTTCTGCGGCCTCTTTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCAAGGTCTGCCTCTCGAACTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR GCA 90 bp | TTCGAGAGGCAGACCTTGCACTGTGCACATGACATGGCTCTGCTCTaGTCTGTGCCTCAAAGAGGCCGCAGAACAGATTGGGAGAACAGA | + |
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Preference number: 1 (lower is better) Translates to: FERQTLHCAHDMALL*SVPQRGRRTDWENR Trigger: TCTGTTCTCCCAATCTGTTCTGCGGCCTCTTTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCAAGGTCTGCCTCTCGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR CCA 90 bp | GGTTCTGGTAGTTCGAGAGGCAGACCTTGCACTGTGCACATGACATaGCTCTGCTCTGCTCTGTGCCTCAAAGAGGCCGCAGAACAGATT | + |
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Preference number: 1 (lower is better) Translates to: GSGSSRGRPCTVHMT*LCSALCLKEAAEQI Trigger: AATCTGTTCTGCGGCCTCTTTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCAAGGTCTGCCTCTCGAACTACCAGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR GCA 90 bp | GCTACGAGCAACCATCTTGGCTCCTGGGCTTCCAGGATTGAGTATTaGAGCACCCATGCAGAGCTAACTCAACACCCCAAAACACAAGCG | + |
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Preference number: 1 (lower is better) Translates to: ATSNHLGSWASRIEY*STHAELTQHPKTQA Trigger: CGCTTGTGTTTTGGGGTGTTGAGTTAGCTCTGCATGGGTGCTGCAATACTCAATCCTGGAAGCCCAGGAGCCAAGATGGTTGCTCGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR TCA 90 bp | GACAACTTCAGGGCTTCATCAGCCTTCTACCCTCAGCTCTGCCTCTaGCTGGCTAGTTCTAAAGCTAAGCTCACCGTCCGTTTCTTGTGC | + |
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Preference number: 1 (lower is better) Translates to: DNFRASSAFYPQLCL*LASSKAKLTVRFLC Trigger: GCACAAGAAACGGACGGTGAGCTTAGCTTTAGAACTAGCCAGTCAGAGGCAGAGCTGAGGGTAGAAGGCTGATGAAGCCCTGAAGTTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR CCA 90 bp | ACTTCAGGGCTTCATCAGCCTTCTACCCTCAGCTCTGCCTCTGACTaGCTAGTTCTAAAGCTAAGCTCACCGTCCGTTTCTTGTGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: TSGLHQPSTLSSASD*LVLKLSSPSVSCAC Trigger: ACAGGCACAAGAAACGGACGGTGAGCTTAGCTTTAGAACTAGCCAGTCAGAGGCAGAGCTGAGGGTAGAAGGCTGATGAAGCCCTGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR GCA 90 bp | ATACCTCCAATCTCTCTTGGTTCTGGTAGTTCGAGAGGCAGACCTTaGACTGTGCACATGACATGGCTCTGCTCTGCTCTGTGCCTCAAA | + |
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Preference number: 1 (lower is better) Translates to: IPPISLGSGSSRGRP*TVHMTWLCSALCLK Trigger: TTTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCAAGGTCTGCCTCTCGAACTACCAGAACCAAGAGAGATTGGAGGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR GCA 90 bp | CTGTCTTTCAGCAATGTCATCACATCTGTCACACATCCAGGCATCTaGAGTGACCATAGCCTGAACCAGAGTCTGCATTGCAGCTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: LSFSNVITSVTHPGI*SDHSLNQSLHCSCQ Trigger: CTGGCAGCTGCAATGCAGACTCTGGTTCAGGCTATGGTCACTGCAGATGCCTGGATGTGTGACAGATGTGATGACATTGCTGAAAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR TCA 90 bp | CCCGTGTATCCAGGAATAGAGAGGGGTCCTGCCTTTCATGACTTCTaGCCAGTAAACACCAAGGCGCTAGTGTTCCACAGAGCTAATTCA | + |
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Preference number: 1 (lower is better) Translates to: PVYPGIERGPAFHDF*PVNTKALVFHRANS Trigger: TGAATTAGCTCTGTGGAACACTAGCGCCTTGGTGTTTACTGGTCAGAAGTCATGAAAGGCAGGACCCCTCTCTATTCCTGGATACACGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR-3UTR GCA 90 bp | ACCTTCTGGTACAAGAGGGAGAAAGCTCACGTAACTGGAGCCCTGCTCAAGAGCTGTTGGGTTTTCGGGTaGGGGCTGAGGAAGCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: TFWYKREKAHVTGALLKSCWVFG*GLRKQA Trigger: TGCCTGCTTCCTCAGCCCGCACCCGAAAACCCAACA...GCTCTTGAGCAGGGCTCCAGTTACGTGAGCTTTCTCCCTCTTGTACCAGAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR-3UTR GCA 90 bp | CAAGACACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTGTTGGGTTTTCGGGTaGGGGCTGAGGAAGCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: QDTLVKGFLFGGAVCVAVCWVFG*GLRKQA Trigger: TGCCTGCTTCCTCAGCCCGCACCCGAAAACCCAACA...AACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTGTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
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| 3UTR-3UTR TCA 90 bp | AGGCAGACCTTGCACTGTGCACATGACATGGCTCTGCTCTGCTCTGTGCCTCAAGGGTCCTGCCTTTCATaGCTTCTGACCAGTAAACAC | + |
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Preference number: 2 (lower is better) Translates to: RQTLHCAHDMALLCSVPQGSCLS*LLTSKH Trigger: GTGTTTACTGGTCAGAAGTCATGAAAGGCAGGACCC...TTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCAAGGTCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCTCTCTTGGCCTTCCACTGGGAGTGGGTCCCTCTGTCTTTCAGCAATGTGCCTTTCATGACTTCTaGCCAGTAAACACCAAGGCG | + |
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Preference number: 2 (lower is better) Translates to: KSSLGLPLGVGPSVFQQCAFHDF*PVNTKA Trigger: CGCCTTGGTGTTTACTGGTCAGAAGTCATGAAAGGC...ACATTGCTGAAAGACAGAGGGACCCACTCCCAGTGGAAGGCCAAGAGAGCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR-3UTR GCA 90 bp | GGACAGGGCAGGGTTGGGATAGTCACAGTAACCCCATTTATACACAGGGCAGAGCACATGACATGGCTCTaGTCTGCTCTGTGCCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: GQGRVGIVTVTPFIHRAEHMTWL*SALCLK Trigger: TTTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTG...CTCTGCCCTGTGTATAAATGGGGTTACTGTGACTATCCCAACCCTGCCCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR-3UTR TCA 90 bp | GGACAGGGCAGGGTTGGGATAGTCACAGTAACCCCATTTATACACAGGGCAGAGCATTCTCTTATTCCCTaGAAATCTACCTTCACGGGC | + |
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Preference number: 2 (lower is better) Translates to: GQGRVGIVTVTPFIHRAEHSLIP*KSTFTG Trigger: GCCCGTGAAGGTAGATTTTCAGGGAATAAGAGAATG...CTCTGCCCTGTGTATAAATGGGGTTACTGTGACTATCCCAACCCTGCCCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR-3UTR CCA 90 bp | ACCTTCTGGTACAAGAGGGAGAAAGCTCACGTAACTGGAGCCCTGCTCAAGAGCCTGGAAACTGTCTTTTaGCTGAATCGACTCCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: TFWYKREKAHVTGALLKSLETVF*LNRLQV Trigger: AACCTGGAGTCGATTCAGCCAAAAGACAGTTTCCAG...GCTCTTGAGCAGGGCTCCAGTTACGTGAGCTTTCTCCCTCTTGTACCAGAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR-3UTR CCA 90 bp | AACGGTGATGAAGCAGGCGCTGAGCAGTTGTTTATGCTCAGCCTGGGCTCTCACGGGGTTCGAGATATTTaGGGAGATATTTTACTGGGT | + |
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Preference number: 2 (lower is better) Translates to: NGDEAGAEQLFMLSLGSHGVRDI*GDILLG Trigger: ACCCAGTAAAATATCTCCCCAAATATCTCGAACCCC...GTGAGAGCCCAGGCTGAGCATAAACAACTGCTCAGCGCCTGCTTCATCACCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
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| 3UTR-3UTR TCA 90 bp | GAACAGATTGGGAGAACAGAGCCACTTCTGGAAACTGTCTTTTGGCTGAATCGATTAGGGACTGCAGGTTaGAGGCAGCATCCTGCACAT | + |
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Preference number: 2 (lower is better) Translates to: EQIGRTEPLLETVFWLNRLGTAG*RQHPAH Trigger: ATGTGCAGGATGCTGCCTTCAACCTGCAGTCCCTAA...TCGATTCAGCCAAAAGACAGTTTCCAGAAGTGGCTCTGTTCTCCCAATCTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGCTCTGTGCCTCAAAGAGGCCGCAGAACAGATTGGGAGAACAGAGCCACGTAATGAGATATACATaGTATCACCAAATAGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: ALLCASKRPQNRLGEQSHVMRYT*YHQIVG Trigger: CCCCACTATTTGGTGATATCATGTATATCTCATTAC...GTGGCTCTGTTCTCCCAATCTGTTCTGCGGCCTCTTTGAGGCACAGAGCAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR-3UTR CCA 90 bp | CCCCATTTATACACAGGGCAGAGGTCACAGGTAGCTAAAACCTCTAGGAATGGAAACCTGGCTCACCCTTaGAAAGGATCAAACGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: PHLYTGQRSQVAKTSRNGNLAHP*KGSNGC Trigger: ACACCCGTTTGATCCTTTCCAAGGGTGAGCCAGGTT...TCCATTCCTAGAGGTTTTAGCTACCTGTGACCTCTGCCCTGTGTATAAATGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR-3UTR GCA 90 bp | GGACAGGGCAGGGTTGGGATAGTCACAGTAACCCCATTTATACACAGGGCAGAGTTTTTATTGCTCATTTaGTGCTTAGGGACTGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: GQGRVGIVTVTPFIHRAEFLLLI*CLGTAG Trigger: ACCTGCAGTCCCTAAGCAGCAAATGAGCAATAAAAA...CTCTGCCCTGTGTATAAATGGGGTTACTGTGACTATCCCAACCCTGCCCTGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR-3UTR TCA 90 bp | CCCCATTTATACACAGGGCAGAGGTCACAGGTAGCTAAAACCTCTAGGAATGGAAAACTGTCTTTTGGCTaGATCGACTCCAGGTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: PHLYTGQRSQVAKTSRNGKLSFG*IDSRLV Trigger: AACTAACCTGGAGTCGATTCAGCCAAAAGACAGTTT...TCCATTCCTAGAGGTTTTAGCTACCTGTGACCTCTGCCCTGTGTATAAATGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR-3UTR TCA 90 bp | GAACAGATTGGGAGAACAGAGCCACTTCTGGAAACTGTCTTTTGGCTGAATCGAGTGGCTTTGATCTGCTaGTTTTTATTGCTCATTTGC | + |
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Preference number: 2 (lower is better) Translates to: EQIGRTEPLLETVFWLNRVALIC*FLLLIC Trigger: GCAAATGAGCAATAAAAATCAGCAGATCAAAGCCAC...TCGATTCAGCCAAAAGACAGTTTCCAGAAGTGGCTCTGTTCTCCCAATCTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR GCA 72 bp | TCGGTGCGGCCCTGTGCCCGATGTGAGCATCATGCCTaGAGCCGTTGTACCCACGTGGCATATTTGCCCACC | + |
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Preference number: 3 (lower is better) Translates to: SVRPCARCEHHA*SRCTHVAYLPT Trigger: GGTGGGCAAATATGCCACGTGGGTACAACGGCTGCAGGCATGATGCTCACATCGGGCACAGGGCCGCACCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR TCA 72 bp | GCCCCTAAGCTTCCCAGCTCCTGTGGACCTTGGACTTaGCCTGCTTATCCCTGCTCAGGGCAGGTACCAGGC | + |
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Preference number: 3 (lower is better) Translates to: APKLPSSCGPWT*PAYPCSGQVPG Trigger: GCCTGGTACCTGCCCTGAGCAGGGATAAGCAGGTCAAGTCCAAGGTCCACAGGAGCTGGGAAGCTTAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR CCA 72 bp | ATGAAGCAGGCGCTGAGCAGTTGTTTATGCTCAGCCTaGGCTCTCACCGTCACAGCTCAGGAAGGGAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: MKQALSSCLCSA*ALTVTAQEGSP Trigger: TGGGCTCCCTTCCTGAGCTGTGACGGTGAGAGCCCAGGCTGAGCATAAACAACTGCTCAGCGCCTGCTTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
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| 3UTR GCA 72 bp | AGAGGCAGACCTTGCACTGTGCACATGACATGGCTCTaGTCTGCTCTGTGCCTCAAAGAGGCCGCAGAACAG | + |
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Preference number: 3 (lower is better) Translates to: RGRPCTVHMTWL*SALCLKEAAEQ Trigger: CTGTTCTGCGGCCTCTTTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCAAGGTCTGCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR CCA 72 bp | AGTTCGAGAGGCAGACCTTGCACTGTGCACATGACATaGCTCTGCTCTGCTCTGTGCCTCAAAGAGGCCGCA | + |
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Preference number: 3 (lower is better) Translates to: SSRGRPCTVHMT*LCSALCLKEAA Trigger: TGCGGCCTCTTTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCAAGGTCTGCCTCTCGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR TCA 72 bp | CTGTCACACATCCAGGCATCTGCAGTGACCATAGCCTaGACCAGAGTCTGCATTGCAGCTGCCAGTCACTGC | + |
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Preference number: 3 (lower is better) Translates to: LSHIQASAVTIA*TRVCIAAASHC Trigger: GCAGTGACTGGCAGCTGCAATGCAGACTCTGGTTCAGGCTATGGTCACTGCAGATGCCTGGATGTGTGACAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR GCA 72 bp | CAGACCTTGCACTGTGCACATGACATGGCTCTGCTCTaGTCTGTGCCTCAAAGAGGCCGCAGAACAGATTGG | + |
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Preference number: 3 (lower is better) Translates to: QTLHCAHDMALL*SVPQRGRRTDW Trigger: CCAATCTGTTCTGCGGCCTCTTTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCAAGGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR-3UTR CAA 90 bp | ACCTTCTGGTACAAGAGGGAGAAAGCTCACGTAACTGGAGCCCTGCTCAAGAGCCGTGATCGGTCTGCATaGAGCTTCATCCCCTACCCA | + |
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Preference number: 3 (lower is better) Translates to: TFWYKREKAHVTGALLKSRDRSA*SFIPYP Trigger: TGGGTAGGGGATGAAGCTCAATGCAGACCGATCACG...GCTCTTGAGCAGGGCTCCAGTTACGTGAGCTTTCTCCCTCTTGTACCAGAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR-3UTR CAA 90 bp | CTTGGTTCTGGTAGTTCGAGAGGCAGACCTTGCACTGTGCACATGACATGGCTCCTTAGGGACTGCAGGTaGAAGGCAGCATCCTGCACA | + |
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Preference number: 3 (lower is better) Translates to: LGSGSSRGRPCTVHMTWLLRDCR*KAASCT Trigger: TGTGCAGGATGCTGCCTTCAACCTGCAGTCCCTAAG...GAGCCATGTCATGTGCACAGTGCAAGGTCTGCCTCTCGAACTACCAGAACCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR GCA 72 bp | TGCACTGTGCACATGACATGGCTCTGCTCTGCTCTGTaGCTCAAAGAGGCCGCAGAACAGATTGGGAGAACA | + |
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Preference number: 3 (lower is better) Translates to: CTVHMTWLCSAL*LKEAAEQIGRT Trigger: TGTTCTCCCAATCTGTTCTGCGGCCTCTTTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR CCA 72 bp | GAGGTCCCTTGGTTGAAACCTAACCTGGCTCACCCTTaGAAAGGATCAAACGGGTGTCACTACCTCCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: EVPWLKPNLAHP*KGSNGCHYLLW Trigger: CCAGAGGAGGTAGTGACACCCGTTTGATCCTTTCCAAGGGTGAGCCAGGTTAGGTTTCAACCAAGGGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR CCA 72 bp | CCCTGCTCAAGAGCTCTCTTGGCCTTCCACTGGGAGTaGGTCCCTCTGTCTTTCAGCAATGTCATCACATCT | + |
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Preference number: 3 (lower is better) Translates to: PCSRALLAFHWE*VPLSFSNVITS Trigger: AGATGTGATGACATTGCTGAAAGACAGAGGGACCCACTCCCAGTGGAAGGCCAAGAGAGCTCTTGAGCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR GCA 72 bp | ATCTCTCTTGGTTCTGGTAGTTCGAGAGGCAGACCTTaGACTGTGCACATGACATGGCTCTGCTCTGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: ISLGSGSSRGRP*TVHMTWLCSAL Trigger: CAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCAAGGTCTGCCTCTCGAACTACCAGAACCAAGAGAGAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR CCA 72 bp | AACCTTCTGGTACAAGAGGGAGAAAGCTCACGTAACTaGAGCCCTGCTCAAGAGCTCTCTTGGCCTTCCACT | + |
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Preference number: 3 (lower is better) Translates to: NLLVQEGESSRN*SPAQELSWPST Trigger: AGTGGAAGGCCAAGAGAGCTCTTGAGCAGGGCTCCAGTTACGTGAGCTTTCTCCCTCTTGTACCAGAAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR-3UTR CAA 90 bp | AGGCAGACCTTGCACTGTGCACATGACATGGCTCTGCTCTGCTCTGTGCCTCAATCTGGAAACTGTCTTTaGGCTGAATCGACTCCAGGT | + |
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Preference number: 3 (lower is better) Translates to: RQTLHCAHDMALLCSVPQSGNCL*AESTPG Trigger: ACCTGGAGTCGATTCAGCCAAAAGACAGTTTCCAGA...TTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCAAGGTCTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR TCA 72 bp | CCAGGAATAGAGAGGGGTCCTGCCTTTCATGACTTCTaGCCAGTAAACACCAAGGCGCTAGTGTTCCACAGA | + |
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Preference number: 3 (lower is better) Translates to: PGIERGPAFHDF*PVNTKALVFHR Trigger: TCTGTGGAACACTAGCGCCTTGGTGTTTACTGGTCAGAAGTCATGAAAGGCAGGACCCCTCTCTATTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR TCA 72 bp | TACGAGCAACCATCTTGGCTCCTGGGCTTCCAGGATTaGGTATTGCAGCACCCATGCAGAGCTAACTCAACA | + |
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Preference number: 3 (lower is better) Translates to: YEQPSWLLGFQD*VLQHPCRANST Trigger: TGTTGAGTTAGCTCTGCATGGGTGCTGCAATACTCAATCCTGGAAGCCCAGGAGCCAAGATGGTTGCTCGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR GCA 72 bp | ATCTGCAGTGACCATAGCCTGAACCAGAGTCTGCATTaGAGCTGCCAGTCACTGCCACATTCTCTTATTCCC | + |
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Preference number: 3 (lower is better) Translates to: ICSDHSLNQSLH*SCQSLPHSLIP Trigger: GGGAATAAGAGAATGTGGCAGTGACTGGCAGCTGCAATGCAGACTCTGGTTCAGGCTATGGTCACTGCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR CCA 72 bp | CTCTGCTCTGTGCCTCAAAGAGGCCGCAGAACAGATTaGGAGAACAGAGCCACTTCTGGAAACTGTCTTTTG | + |
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Preference number: 3 (lower is better) Translates to: LCSVPQRGRRTD*ENRATSGNCLL Trigger: CAAAAGACAGTTTCCAGAAGTGGCTCTGTTCTCCCAATCTGTTCTGCGGCCTCTTTGAGGCACAGAGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR-3UTR CAA 90 bp | GAACAGATTGGGAGAACAGAGCCACTTCTGGAAACTGTCTTTTGGCTGAATCGACGTGAGGTCCCTTGGTaGAAACCTAACCTGGCTCAC | + |
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Preference number: 3 (lower is better) Translates to: EQIGRTEPLLETVFWLNRREVPW*KPNLAH Trigger: GTGAGCCAGGTTAGGTTTCAACCAAGGGACCTCACG...TCGATTCAGCCAAAAGACAGTTTCCAGAAGTGGCTCTGTTCTCCCAATCTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR GCA 72 bp | CTGCTGATTTTTATTGCTCATTTGCTGCTTAGGGACTaGAGGTTGAAGGCAGCATCCTGCACATCTGGACGC | + |
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Preference number: 3 (lower is better) Translates to: LLIFIAHLLLRD*RLKAASCTSGR Trigger: GCGTCCAGATGTGCAGGATGCTGCCTTCAACCTGCAGTCCCTAAGCAGCAAATGAGCAATAAAAATCAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR TCA 72 bp | GGTACCAAGATGGGGATGAGGGTAATGAGATATACATaGTATCACCAAATAGTGGGGACATCCTGGCGTCCC | + |
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Preference number: 3 (lower is better) Translates to: GTKMGMRVMRYT*YHQIVGTSWRP Trigger: GGGACGCCAGGATGTCCCCACTATTTGGTGATATCATGTATATCTCATTACCCTCATCCCCATCTTGGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR TCA 72 bp | GGAGAACAGAGCCACTTCTGGAAACTGTCTTTTGGCTaGATCGACTCCAGGTTAGTTAGCAGCATGCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: GEQSHFWKLSFG*IDSRLVSSMQL Trigger: CAGTTGCATGCTGCTAACTAACCTGGAGTCGATTCAGCCAAAAGACAGTTTCCAGAAGTGGCTCTGTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| 3UTR GCA 72 bp | CGGCCTTGTCTCCTCCCAAAGCAGAGAGTTACGGAATaGAACAGAGATAAGACTCAGAATTTACGTCTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: RPCLLPKQRVTE*NRDKTQNLRLR Trigger: TCTAAGACGTAAATTCTGAGTCTTATCTCTGTTGCATTCCGTAACTCTCTGCTTTGGGAGGAGACAAGGCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR CCA 90 bp | TCACCGTCACAGCTCAGGAAGGGAGCCCATCACCCGCTTCGTGGGATCTGGAGGCCTCAGGCTGATGGTTaGGGGCTGGCACCGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSQLRKGAHHPLRGIWRPQADG*GLAPRW Trigger: CCAGCGCGGTGCCAGCCCCCAACCATCAGCCTGAGG...CCTCCAGATCCCACGAAGCGGGTGATGGGCTCCCTTCCTGAGCTGTGACGGTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGGCTCTCACCGTCACAGCTCAGGAAGGGAGCCCATCACCCGCTTCGTGCCACCACCCGAGACTTaGCCCGAGCCACGCTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLGSHRHSSGREPITRFVPPPET*PEPRCV Trigger: AACGCAGCGTGGCTCGGGCCAAGTCTCGGGTGGTGG...CACGAAGCGGGTGATGGGCTCCCTTCCTGAGCTGTGACGGTGAGAGCCCAGGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCACCGTCACAGCTCAGGAAGGGAGCCCATCACCCGCTTCGTGGGATCTGGGCCCAGCTGGAAGGCTaGACGAGCAGCCTTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPSQLRKGAHHPLRGIWAQLEG*TSSLHC Trigger: GCAGTGAAGGCTGCTCGTGCAGCCTTCCAGCTGGGC...CCAGATCCCACGAAGCGGGTGATGGGCTCCCTTCCTGAGCTGTGACGGTGAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCACCGTCACAGCTCAGGAAGGGAGCCCATCACCCGCTTCGTGGGATCTGGCCTCCGTGGAGCCTGTaGACGCCACTTTGTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LSPSQLRKGAHHPLRGIWPPWSL*TPLCPH Trigger: GTGTGGACAAAGTGGCGTTCACAGGCTCCACGGAGG...CCAGATCCCACGAAGCGGGTGATGGGCTCCCTTCCTGAGCTGTGACGGTGAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR CCA 90 bp | TTGCACTGTGCACATGACATGGCTCTGCTCTGCTCTGTGCCTCAAAGAGGCCGCCCTCAGGCTGATGGTTaGGGGCTGGCACCGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHCAHDMALLCSVPQRGRPQADG*GLAPRW Trigger: CCAGCGCGGTGCCAGCCCCCAACCATCAGCCTGAGG...GCGGCCTCTTTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR TCA 90 bp | TCACCGTCACAGCTCAGGAAGGGAGCCCATCACCCGCTTCGTGGGATCTGGAGGAGCACTGGCCCTGGTTaGAGAACAGGGCAAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSQLRKGAHHPLRGIWRSTGPG*RTGQSG Trigger: CCCACTTTGCCCTGTTCTTCAACCAGGGCCAGTGCT...CCTCCAGATCCCACGAAGCGGGTGATGGGCTCCCTTCCTGAGCTGTGACGGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR TCA 90 bp | TCACCGTCACAGCTCAGGAAGGGAGCCCATCACCCGCTTCGTGGGATCTGGAGGGGAAGTTCCACGGAATaGTCTGTCCACACACGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPSQLRKGAHHPLRGIWRGSSTE*SVHTRP Trigger: TGGGCGTGTGTGGACAGATCATTCCGTGGAACTTCC...CCTCCAGATCCCACGAAGCGGGTGATGGGCTCCCTTCCTGAGCTGTGACGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR TCA 90 bp | CAAGACACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTCCACGTAGAGCGCGGTaGGCGGTGTCTGCTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QDTLVKGFLFGGAVCVAVPRRAR*AVSARP Trigger: TGGCCGAGCAGACACCGCTCACCGCGCTCTACGTGG...AACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTGTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
||
| CDS-3UTR TCA 90 bp | GCTCTGCTCTGTGCCTCAAAGAGGCCGCAGAACAGATTGGGAGAACAGAGCCACCCAGGGTTACTCTCTTaGGGTTGCTGCTCCCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLCASKRPQNRLGEQSHPGLLS*GCCSRR Trigger: CCGCCGGGAGCAGCAACCTCAAGAGAGTAACCCTGG...GTGGCTCTGTTCTCCCAATCTGTTCTGCGGCCTCTTTGAGGCACAGAGCAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR CCA 90 bp | TGCAGCCCCATCCACGTTTGCTCTTTCTTTAATCCTAACGGTGATGAAGCAGGCGGGCTGGCACCGCGCTaGTGGCGGCGGCGGACAACA | + |
|
Preference number: 4 (lower is better) Translates to: CSPIHVCSFFNPNGDEAGGLAPR*WRRRTT Trigger: TGTTGTCCGCCGCCGCCACCAGCGCGGTGCCAGCCC...GCCTGCTTCATCACCGTTAGGATTAAAGAAAGAGCAAACGTGGATGGGGCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTGCTCTGTGCCTCAAAGAGGCCGCAGAACAGATTGGGAGAACAGAGCCACCCCGGTTGCCAGGGCTaGGCCCAGTTTCCATGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLCASKRPQNRLGEQSHPGCQG*AQFPCL Trigger: CAAGCATGGAAACTGGGCCCAGCCCTGGCAACCGGG...GTGGCTCTGTTCTCCCAATCTGTTCTGCGGCCTCTTTGAGGCACAGAGCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR TCA 90 bp | ACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTCCCACGTAGAGCGCGGTaGGCGGTGTCTGCTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLVKGFLFGGAVCVAVFLPRRAR*AVSARP Trigger: TGGCCGAGCAGACACCGCTCACCGCGCTCTACGTGG...GAGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
||
| CDS-3UTR TCA 90 bp | GCTCTGCTCTGTGCCTCAAAGAGGCCGCAGAACAGATTGGGAGAACAGAGCCACGCCACCTGGATTAGGTaGCCAACCTCCGTGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLCASKRPQNRLGEQSHATWIR*PTSVEP Trigger: AGGCTCCACGGAGGTTGGTCACCTAATCCAGGTGGC...GTGGCTCTGTTCTCCCAATCTGTTCTGCGGCCTCTTTGAGGCACAGAGCAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR TCA 90 bp | GTGATGAAGCAGGCGCTGAGCAGTTGTTTATGCTCAGCCTGGGCTCTCACCGTCGCCACCTGGATTAGGTaGCCAACCTCCGTGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VMKQALSSCLCSAWALTVATWIR*PTSVEP Trigger: AGGCTCCACGGAGGTTGGTCACCTAATCCAGGTGGC...GACGGTGAGAGCCCAGGCTGAGCATAAACAACTGCTCAGCGCCTGCTTCATCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTCAGCAGGGCGAGCCCAGCTaGAAGGCTGCACGAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FGEGVSLWRRSVCGGFSQQGEPS*KAARAA Trigger: GGCTGCTCGTGCAGCCTTCCAGCTGGGCTCGCCCTG...CTGAGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGGCTCTCACCGTCACAGCTCAGGAAGGGAGCCCATCACCCGCTTCGTGCGCCGTCGATGGGAATaGTTTTCCCATGGTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLGSHRHSSGREPITRFVRRRWE*FSHGTC Trigger: ACAAGTACCATGGGAAAACCATTCCCATCGACGGCG...CACGAAGCGGGTGATGGGCTCCCTTCCTGAGCTGTGACGGTGAGAGCCCAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR CCA 90 bp | CACCGTCACAGCTCAGGAAGGGAGCCCATCACCCGCTTCGTGGGATCTGGAGGGAGAAGTCGCCGTCGATaGGAATGGTTTTCCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: HRHSSGREPITRFVGSGGRSRRR*EWFSHG Trigger: ACCATGGGAAAACCATTCCCATCGACGGCGACTTCT...CCCTCCAGATCCCACGAAGCGGGTGATGGGCTCCCTTCCTGAGCTGTGACGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR CCA 90 bp | AACGGTGATGAAGCAGGCGCTGAGCAGTTGTTTATGCTCAGCCTGGGCTCTCACCCCGGTTGCCAGGGCTaGGCCCAGTTTCCATGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NGDEAGAEQLFMLSLGSHPGCQG*AQFPCL Trigger: CAAGCATGGAAACTGGGCCCAGCCCTGGCAACCGGG...GTGAGAGCCCAGGCTGAGCATAAACAACTGCTCAGCGCCTGCTTCATCACCGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTGCTCTGTGCCTCAAAGAGGCCGCAGAACAGATTGGGAGAACAGAGCCACAGCACTGGCCCTGGTTaGAGAACAGGGCAAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLCASKRPQNRLGEQSHSTGPG*RTGQSG Trigger: CCCACTTTGCCCTGTTCTTCAACCAGGGCCAGTGCT...GTGGCTCTGTTCTCCCAATCTGTTCTGCGGCCTCTTTGAGGCACAGAGCAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR GCA 90 bp | TCACCGTCACAGCTCAGGAAGGGAGCCCATCACCCGCTTCGTGGGATCTGGAGGCTGCTGACGGCGTCGTaGCACTCATTGTTAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPSQLRKGAHHPLRGIWRLLTAS*HSLLMK Trigger: CTTCATTAACAATGAGTGGCACGACGCCGTCAGCAG...CCTCCAGATCCCACGAAGCGGGTGATGGGCTCCCTTCCTGAGCTGTGACGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGTTCTGGTAGTTCGAGAGGCAGACCTTGCACTGTGCACATGACATGGCTCCACCACGTTCCCGGTTaGCAGGGCTGGGCCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGSGSSRGRPCTVHMTWLHHVPG*QGWAQF Trigger: AAACTGGGCCCAGCCCTGGCAACCGGGAACGTGGTG...GAGCCATGTCATGTGCACAGTGCAAGGTCTGCCTCTCGAACTACCAGAACCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR GCA 90 bp | CAAGACACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTGCGGTGAGCGGTGTCTaGTCGGCCACCTTCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: QDTLVKGFLFGGAVCVAVAVSGV*SATFIT Trigger: GGTGATGAAGGTGGCCGAGCAGACACCGCTCACCGC...AACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTGTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
||
| CDS-3UTR CCA 90 bp | CTTGTCTCCTCCCAAAGCAGAGAGTTACGGAATGCAACAGAGATAAGACTCAGAGGGCTGGCACCGCGCTaGTGGCGGCGGCGGACAACA | + |
|
Preference number: 4 (lower is better) Translates to: LVSSQSRELRNATEIRLRGLAPR*WRRRTT Trigger: TGTTGTCCGCCGCCGCCACCAGCGCGGTGCCAGCCC...TCTGAGTCTTATCTCTGTTGCATTCCGTAACTCTCTGCTTTGGGAGGAGACAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR TCA 90 bp | CACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTCAGAAGACCTCAGGCTaGTGGTTGGGGGCTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: HFGEGVSLWRRSVCGGFSQKTSG*WLGAGT Trigger: GGTGCCAGCCCCCAACCATCAGCCTGAGGTCTTCTG...AGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR GCA 90 bp | TTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTCAGGCCCAGCTGGAAGGCTaGACGAGCAGCCTTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FGEGVSLWRRSVCGGFSQAQLEG*TSSLHC Trigger: GCAGTGAAGGCTGCTCGTGCAGCCTTCCAGCTGGGC...CTGAGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR GCA 90 bp | ACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTCCACCACGTTCCCGGTTaGCAGGGCTGGGCCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLVKGFLFGGAVCVAVFLHHVPG*QGWAQF Trigger: AAACTGGGCCCAGCCCTGGCAACCGGGAACGTGGTG...GAGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
||
| CDS-3UTR GCA 90 bp | CACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTGCGGTGAGCGGTGTCTaGTCGGCCACCTTCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: HFGEGVSLWRRSVCGGFSAVSGV*SATFIT Trigger: GGTGATGAAGGTGGCCGAGCAGACACCGCTCACCGC...AGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGCTCTCTTGGCCTTCCACTGGGAGTGGGTCCCTCTGTCTTTCAGCAATGTTTCCCTTCGGCCACCTaGCAGATGACCTCCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSSLGLPLGVGPSVFQQCFPSAT*QMTSPV Trigger: CACAGGGGAGGTCATCTGCCAGGTGGCCGAAGGGAA...ACATTGCTGAAAGACAGAGGGACCCACTCCCAGTGGAAGGCCAAGAGAGCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTCCCCGGTTGCCAGGGCTaGGCCCAGTTTCCATGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLVKGFLFGGAVCVAVFLPGCQG*AQFPCL Trigger: CAAGCATGGAAACTGGGCCCAGCCCTGGCAACCGGG...GAGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
||
| CDS-3UTR GCA 90 bp | AGGCAGACCTTGCACTGTGCACATGACATGGCTCTGCTCTGCTCTGTGCCTCAATGGGCCCAGTTTCCATaGTTGCATCAGGAGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RQTLHCAHDMALLCSVPQWAQFP*LHQERE Trigger: TTCCCGCTCCTGATGCAAGCATGGAAACTGGGCCCA...TTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCAAGGTCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR GCA 90 bp | AGCCCCATCCACGTTTGCTCTTTCTTTAATCCTAACGGTGATGAAGCAGGCGCTCACCACGTTCCCGGTTaGCAGGGCTGGGCCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPIHVCSFFNPNGDEAGAHHVPG*QGWAQF Trigger: AAACTGGGCCCAGCCCTGGCAACCGGGAACGTGGTG...AGCGCCTGCTTCATCACCGTTAGGATTAAAGAAAGAGCAAACGTGGATGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTCAGGGCAAAGTGGGCCTaGTCCACAGCCCAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TLVKGFLFGGAVCVAVFLRAKWA*STAQSM Trigger: CATGGACTGGGCTGTGGAGCAGGCCCACTTTGCCCT...GAGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR TCA 90 bp | TCTTTAATCCTAACGGTGATGAAGCAGGCGCTGAGCAGTTGTTTATGCTCAGCCCAGAAGACCTCAGGCTaGTGGTTGGGGGCTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SLILTVMKQALSSCLCSAQKTSG*WLGAGT Trigger: GGTGCCAGCCCCCAACCATCAGCCTGAGGTCTTCTG...GGCTGAGCATAAACAACTGCTCAGCGCCTGCTTCATCACCGTTAGGATTAAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGTTCTGGTAGTTCGAGAGGCAGACCTTGCACTGTGCACATGACATGGCTCGGAAGTTCCACGGAATaGTCTGTCCACACACGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGSGSSRGRPCTVHMTWLGSSTE*SVHTRP Trigger: TGGGCGTGTGTGGACAGATCATTCCGTGGAACTTCC...GAGCCATGTCATGTGCACAGTGCAAGGTCTGCCTCTCGAACTACCAGAACCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR TCA 90 bp | TGCTCTTTCTTTAATCCTAACGGTGATGAAGCAGGCGCTGAGCAGTTGTTTATGCCACGTAGAGCGCGGTaGGCGGTGTCTGCTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSFFNPNGDEAGAEQLFMPRRAR*AVSARP Trigger: TGGCCGAGCAGACACCGCTCACCGCGCTCTACGTGG...CATAAACAACTGCTCAGCGCCTGCTTCATCACCGTTAGGATTAAAGAAAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR TCA 90 bp | CACGTTTGCTCTTTCTTTAATCCTAACGGTGATGAAGCAGGCGCTGAGCAGTTGCCAGGGTTACTCTCTTaGGGTTGCTGCTCCCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HVCSFFNPNGDEAGAEQLPGLLS*GCCSRR Trigger: CCGCCGGGAGCAGCAACCTCAAGAGAGTAACCCTGG...CAACTGCTCAGCGCCTGCTTCATCACCGTTAGGATTAAAGAAAGAGCAAACGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR GCA 90 bp | TTGCACTGTGCACATGACATGGCTCTGCTCTGCTCTGTGCCTCAAAGAGGCCGCCTGCTGACGGCGTCGTaGCACTCATTGTTAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHCAHDMALLCSVPQRGRLLTAS*HSLLMK Trigger: CTTCATTAACAATGAGTGGCACGACGCCGTCAGCAG...GCGGCCTCTTTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR GCA 90 bp | CAAGACACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTGGGCCCAGTTTCCATaGTTGCATCAGGAGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QDTLVKGFLFGGAVCVAVWAQFP*LHQERE Trigger: TTCCCGCTCCTGATGCAAGCATGGAAACTGGGCCCA...AACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTGTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
||
| CDS-3UTR GCA 90 bp | CACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTGCCAGGGGGAAAGCCTaGCTCCTTGATCAAGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HFGEGVSLWRRSVCGGFSARGKA*LLDQVG Trigger: GCCAACTTGATCAAGGAGGCAGGCTTTCCCCCTGGC...AGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR GCA 90 bp | AGCCCCATCCACGTTTGCTCTTTCTTTAATCCTAACGGTGATGAAGCAGGCGCTAGGGCAAAGTGGGCCTaGTCCACAGCCCAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SPIHVCSFFNPNGDEAGARAKWA*STAQSM Trigger: CATGGACTGGGCTGTGGAGCAGGCCCACTTTGCCCT...AGCGCCTGCTTCATCACCGTTAGGATTAAAGAAAGAGCAAACGTGGATGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGCTCTCACCGTCACAGCTCAGGAAGGGAGCCCATCACCCGCTTCGTGGTTGAATTTGAGGATTTaGATCACTGGTCCAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: AWALTVTAQEGSPSPASWLNLRI*ITGPKI Trigger: GATCTTTGGACCAGTGATGCAAATCCTCAAATTCAA...CCACGAAGCGGGTGATGGGCTCCCTTCCTGAGCTGTGACGGTGAGAGCCCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCTTTCTTTAATCCTAACGGTGATGAAGCAGGCGCTGAGCAGTTGTTTATGCAGGGCGAGCCCAGCTaGAAGGCTGCACGAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CSFFNPNGDEAGAEQLFMQGEPS*KAARAA Trigger: GGCTGCTCGTGCAGCCTTCCAGCTGGGCTCGCCCTG...CATAAACAACTGCTCAGCGCCTGCTTCATCACCGTTAGGATTAAAGAAAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR CCA 90 bp | TTGCACTGTGCACATGACATGGCTCTGCTCTGCTCTGTGCCTCAAAGAGGCCGCAGAAGTCGCCGTCGATaGGAATGGTTTTCCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LHCAHDMALLCSVPQRGRRSRRR*EWFSHG Trigger: ACCATGGGAAAACCATTCCCATCGACGGCGACTTCT...GCGGCCTCTTTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR CCA 90 bp | TTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTCAGAAGAACAGGGCAAAGTaGGCCTGCTCCACAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FGEGVSLWRRSVCGGFSQKNRAK*ACSTAQ Trigger: CTGGGCTGTGGAGCAGGCCCACTTTGCCCTGTTCTT...CTGAGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR CCA 90 bp | GAACAGATTGGGAGAACAGAGCCACTTCTGGAAACTGTCTTTTGGCTGAATCGACCACCACCCGAGACTTaGCCCGAGCCACGCTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: EQIGRTEPLLETVFWLNRPPPET*PEPRCV Trigger: AACGCAGCGTGGCTCGGGCCAAGTCTCGGGTGGTGG...TCGATTCAGCCAAAAGACAGTTTCCAGAAGTGGCTCTGTTCTCCCAATCTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR CCA 90 bp | AGGCAGACCTTGCACTGTGCACATGACATGGCTCTGCTCTGCTCTGTGCCTCAACTTATAGCCCCCAAATaGAGACTGGGCCCCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: RQTLHCAHDMALLCSVPQLIAPK*RLGPKH Trigger: GTGTTTGGGGCCCAGTCTCCATTTGGGGGCTATAAG...TTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCAAGGTCTGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR CAA 72 bp | AGCATGCAACTGATGCCGAGCCGTGAGGTCCCTTGGTaGAAACCTAACCTGGCTCACCCTTGGAAAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SMQLMPSREVPW*KPNLAHPWKGS Trigger: TGATCCTTTCCAAGGGTGAGCCAGGTTAGGTTTCAACCAAGGGACCTCACGGCTCGGCATCAGTTGCATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR TCA 90 bp | CTTGGTTCTGGTAGTTCGAGAGGCAGACCTTGCACTGTGCACATGACATGGCTCGAAATGTTTTCCTGCTaGCGGCGTCGTGCCACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGSGSSRGRPCTVHMTWLEMFSC*RRRATH Trigger: ATGAGTGGCACGACGCCGTCAGCAGGAAAACATTTC...GAGCCATGTCATGTGCACAGTGCAAGGTCTGCCTCTCGAACTACCAGAACCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR TCA 90 bp | ACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTCGGAAGTTCCACGGAATaGTCTGTCCACACACGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLVKGFLFGGAVCVAVFLGSSTE*SVHTRP Trigger: TGGGCGTGTGTGGACAGATCATTCCGTGGAACTTCC...GAGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
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| CDS-3UTR GCA 90 bp | AAGAGCTCTCTTGGCCTTCCACTGGGAGTGGGTCCCTCTGTCTTTCAGCAATGTTCATACACATTCTCCTaGACGAAGGTCCGGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSSLGLPLGVGPSVFQQCSYTFS*TKVREP Trigger: AGGCTCCCGGACCTTCGTGCAGGAGAATGTGTATGA...ACATTGCTGAAAGACAGAGGGACCCACTCCCAGTGGAAGGCCAAGAGAGCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR GCA 90 bp | GGGGACGGTGTCCTTCTCCGGCATAGGAGAACCAATTCTGGGGTTCGAGATATTTCATACACATTCTCCTaGACGAAGGTCCGGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GDGVLLRHRRTNSGVRDISYTFS*TKVREP Trigger: AGGCTCCCGGACCTTCGTGCAGGAGAATGTGTATGA...AATATCTCGAACCCCAGAATTGGTTCTCCTATGCCGGAGAAGGACACCGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
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| CDS-3UTR GCA 90 bp | GGACAGGGCAGGGTTGGGATAGTCACAGTAACCCCATTTATACACAGGGCAGAGCCTTGGCAATGGTCATaGCGTCTTTTACGTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GQGRVGIVTVTPFIHRAEPWQWS*RLLRPR Trigger: TCGGGGACGTAAAAGACGGCATGACCATTGCCAAGG...CTCTGCCCTGTGTATAAATGGGGTTACTGTGACTATCCCAACCCTGCCCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR CCA 90 bp | CACGTTTGCTCTTTCTTTAATCCTAACGGTGATGAAGCAGGCGCTGAGCAGTTGTTCCCTTCGGCCACCTaGCAGATGACCTCCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HVCSFFNPNGDEAGAEQLFPSAT*QMTSPV Trigger: CACAGGGGAGGTCATCTGCCAGGTGGCCGAAGGGAA...CAACTGCTCAGCGCCTGCTTCATCACCGTTAGGATTAAAGAAAGAGCAAACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
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| CDS-3UTR CCA 90 bp | TGCAGCCCCATCCACGTTTGCTCTTTCTTTAATCCTAACGGTGATGAAGCAGGCAAGAACAGGGCAAAGTaGGCCTGCTCCACAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSPIHVCSFFNPNGDEAGKNRAK*ACSTAQ Trigger: CTGGGCTGTGGAGCAGGCCCACTTTGCCCTGTTCTT...GCCTGCTTCATCACCGTTAGGATTAAAGAAAGAGCAAACGTGGATGGGGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
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| CDS-3UTR CCA 90 bp | GGTGATGAAGCAGGCGCTGAGCAGTTGTTTATGCTCAGCCTGGGCTCTCACCGTCAAAGATCTCCTCCTTaGCAATGGTCATGCCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GDEAGAEQLFMLSLGSHRQRSPP*QWSCRL Trigger: AAGACGGCATGACCATTGCCAAGGAGGAGATCTTTG...ACGGTGAGAGCCCAGGCTGAGCATAAACAACTGCTCAGCGCCTGCTTCATCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
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| CDS-3UTR TCA 90 bp | ACTTGTGAGAACCAAGATCCCAGGTACCAAGATGGGGATGAGGGTAATGAGATACCTCCGTGGAGCCTGTaGACGCCACTTTGTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: TCENQDPRYQDGDEGNEIPPWSL*TPLCPH Trigger: GTGTGGACAAAGTGGCGTTCACAGGCTCCACGGAGG...TATCTCATTACCCTCATCCCCATCTTGGTACCTGGGATCTTGGTTCTCACAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR GCA 90 bp | ACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTCCCCAGTTTCCATGCTTaGATCAGGAGCGGGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLVKGFLFGGAVCVAVFLPSFHA*IRSGKF Trigger: GAACTTCCCGCTCCTGATGCAAGCATGGAAACTGGG...GAGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
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| CDS-3UTR GCA 90 bp | AGCCCCATCCACGTTTGCTCTTTCTTTAATCCTAACGGTGATGAAGCAGGCGCTTGGGCCCAGTTTCCATaGTTGCATCAGGAGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPIHVCSFFNPNGDEAGAWAQFP*LHQERE Trigger: TTCCCGCTCCTGATGCAAGCATGGAAACTGGGCCCA...AGCGCCTGCTTCATCACCGTTAGGATTAAAGAAAGAGCAAACGTGGATGGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
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| CDS-3UTR GCA 90 bp | TCCACAGTAGCTGACTATTTTATTCCAACCAGTCAAGCAGAGGGTACTGATCTCGCGGTGAGCGGTGTCTaGTCGGCCACCTTCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: STVADYFIPTSQAEGTDLAVSGV*SATFIT Trigger: GGTGATGAAGGTGGCCGAGCAGACACCGCTCACCGC...GAGATCAGTACCCTCTGCTTGACTGGTTGGAATAAAATAGTCAGCTACTGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
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| CDS-3UTR CCA 90 bp | CAAGACACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTCGCCGTCGATGGGAATaGTTTTCCCATGGTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QDTLVKGFLFGGAVCVAVRRRWE*FSHGTC Trigger: ACAAGTACCATGGGAAAACCATTCCCATCGACGGCG...AACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTGTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
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| CDS-3UTR CCA 90 bp | AGGCAGACCTTGCACTGTGCACATGACATGGCTCTGCTCTGCTCTGTGCCTCAACAAAGATCTCCTCCTTaGCAATGGTCATGCCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RQTLHCAHDMALLCSVPQQRSPP*QWSCRL Trigger: AAGACGGCATGACCATTGCCAAGGAGGAGATCTTTG...TTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCAAGGTCTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR CCA 90 bp | ACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTCCTTATAGCCCCCAAATaGAGACTGGGCCCCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TLVKGFLFGGAVCVAVFLLIAPK*RLGPKH Trigger: GTGTTTGGGGCCCAGTCTCCATTTGGGGGCTATAAG...GAGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
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| CDS-3UTR TCA 90 bp | AGTCACTGCCACATTCTCTTATTCCCTGAAAATCTACCTTCACGGGCCATCACCCCCCTGTGGAAGGGTTaGCGGTGGGAAATGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHCHILLFPENLPSRAITPLWKG*RWEMFS Trigger: GGAAAACATTTCCCACCGTCAACCCTTCCACAGGGG...GGTGATGGCCCGTGAAGGTAGATTTTCAGGGAATAAGAGAATGTGGCAGTGACT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR GCA 90 bp | ACGTTTGCTCTTTCTTTAATCCTAACGGTGATGAAGCAGGCGCTGAGCAGTTGTGCCAGGGGGAAAGCCTaGCTCCTTGATCAAGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TFALSLILTVMKQALSSCARGKA*LLDQVG Trigger: GCCAACTTGATCAAGGAGGCAGGCTTTCCCCCTGGC...ACAACTGCTCAGCGCCTGCTTCATCACCGTTAGGATTAAAGAAAGAGCAAACGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
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| CDS-3UTR CCA 90 bp | CACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTCGCCGTCGATGGGAATaGTTTTCCCATGGTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HFGEGVSLWRRSVCGGFSRRRWE*FSHGTC Trigger: ACAAGTACCATGGGAAAACCATTCCCATCGACGGCG...AGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
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| CDS-3UTR CCA 90 bp | CACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTAGAAGTCGCCGTCGATaGGAATGGTTTTCCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: HFGEGVSLWRRSVCGGFSRSRRR*EWFSHG Trigger: ACCATGGGAAAACCATTCCCATCGACGGCGACTTCT...AGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
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| CDS-3UTR CCA 90 bp | AAGAGCTCTCTTGGCCTTCCACTGGGAGTGGGTCCCTCTGTCTTTCAGCAATGTTCTCCTCCTTGGCAATaGTCATGCCGTCTTTTACGT | + |
|
Preference number: 4 (lower is better) Translates to: KSSLGLPLGVGPSVFQQCSPPWQ*SCRLLR Trigger: ACGTAAAAGACGGCATGACCATTGCCAAGGAGGAGA...ACATTGCTGAAAGACAGAGGGACCCACTCCCAGTGGAAGGCCAAGAGAGCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR CCA 90 bp | AGGCAGACCTTGCACTGTGCACATGACATGGCTCTGCTCTGCTCTGTGCCTCAACTTGGGACAGGTAATTaGCTTTATCCAGGTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RQTLHCAHDMALLCSVPQLGTGN*LYPGPL Trigger: CAAAGGACCTGGATAAAGCCAATTACCTGTCCCAAG...TTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCAAGGTCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR CCA 90 bp | GCTCTGCTCTGTGCCTCAAAGAGGCCGCAGAACAGATTGGGAGAACAGAGCCACTTACGAGTTCTTCTGTaGCACTTTGACAGTAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLCASKRPQNRLGEQSHLRVLL*HFDSNR Trigger: ACGGTTACTGTCAAAGTGCCACAGAAGAACTCGTAA...GTGGCTCTGTTCTCCCAATCTGTTCTGCGGCCTCTTTGAGGCACAGAGCAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR CAA 72 bp | GCTCTGCTCTGTGCCTCAAAGAGGCCGCAGAACAGATaGGGAGAACAGAGCCACTTCTGGAAACTGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALLCASKRPQNR*GEQSHFWKLSF Trigger: AAAAGACAGTTTCCAGAAGTGGCTCTGTTCTCCCAATCTGTTCTGCGGCCTCTTTGAGGCACAGAGCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR CAA 72 bp | GCATATTTGCCCACCTATCAGCTACGAGCAACCATCTaGGCTCCTGGGCTTCCAGGATTGAGTATTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AYLPTYQLRATI*APGLPGLSIAA Trigger: TGCTGCAATACTCAATCCTGGAAGCCCAGGAGCCAAGATGGTTGCTCGTAGCTGATAGGTGGGCAAATATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR CCA 90 bp | CAAGACACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTGAGGATTTGCATCACTaGTCCAAAGATCTCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QDTLVKGFLFGGAVCVAVEDLHH*SKDLLL Trigger: AAGGAGGAGATCTTTGGACCAGTGATGCAAATCCTC...AACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTGTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR CCA 90 bp | CAAGACACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTCTTGGGACAGGTAATTaGCTTTATCCAGGTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QDTLVKGFLFGGAVCVAVLGTGN*LYPGPL Trigger: CAAAGGACCTGGATAAAGCCAATTACCTGTCCCAAG...AACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTGTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
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| 3UTR CAA 72 bp | CCCCGTGGCTTTGATCTGCTGATTTTTATTGCTCATTaGCTGCTTAGGGACTGCAGGTTGAAGGCAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PRGFDLLIFIAH*LLRDCRLKAAS Trigger: GGATGCTGCCTTCAACCTGCAGTCCCTAAGCAGCAAATGAGCAATAAAAATCAGCAGATCAAAGCCACGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| 3UTR CAA 72 bp | ATTTTTATTGCTCATTTGCTGCTTAGGGACTGCAGGTaGAAGGCAGCATCCTGCACATCTGGACGCGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: IFIAHLLLRDCR*KAASCTSGRVI Trigger: GATCACGCGTCCAGATGTGCAGGATGCTGCCTTCAACCTGCAGTCCCTAAGCAGCAAATGAGCAATAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR TCA 90 bp | TGCTCTTTCTTTAATCCTAACGGTGATGAAGCAGGCGCTGAGCAGTTGTTTATGGAAATGTTTTCCTGCTaGCGGCGTCGTGCCACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CSFFNPNGDEAGAEQLFMEMFSC*RRRATH Trigger: ATGAGTGGCACGACGCCGTCAGCAGGAAAACATTTC...CATAAACAACTGCTCAGCGCCTGCTTCATCACCGTTAGGATTAAAGAAAGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
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| CDS-3UTR GCA 90 bp | TCCACAGTAGCTGACTATTTTATTCCAACCAGTCAAGCAGAGGGTACTGATCTCCCTTGGCAATGGTCATaGCGTCTTTTACGTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: STVADYFIPTSQAEGTDLPWQWS*RLLRPR Trigger: TCGGGGACGTAAAAGACGGCATGACCATTGCCAAGG...GAGATCAGTACCCTCTGCTTGACTGGTTGGAATAAAATAGTCAGCTACTGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
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| CDS-3UTR CCA 90 bp | AGCCCCATCCACGTTTGCTCTTTCTTTAATCCTAACGGTGATGAAGCAGGCGCTCTTGGGACAGGTAATTaGCTTTATCCAGGTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPIHVCSFFNPNGDEAGALGTGN*LYPGPL Trigger: CAAAGGACCTGGATAAAGCCAATTACCTGTCCCAAG...AGCGCCTGCTTCATCACCGTTAGGATTAAAGAAAGAGCAAACGTGGATGGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
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| CDS-3UTR CCA 90 bp | CACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTTTACGAGTTCTTCTGTaGCACTTTGACAGTAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: HFGEGVSLWRRSVCGGFSLRVLL*HFDSNR Trigger: ACGGTTACTGTCAAAGTGCCACAGAAGAACTCGTAA...AGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
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| CDS-3UTR CCA 90 bp | TTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTCAGGAGGATTTGCATCACTaGTCCAAAGATCTCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FGEGVSLWRRSVCGGFSQEDLHH*SKDLLD Trigger: ATCAAGGAGATCTTTGGACCAGTGATGCAAATCCTC...CTGAGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199369.5 |
||
| CDS-3UTR CCA 90 bp | ACGTTTGCTCTTTCTTTAATCCTAACGGTGATGAAGCAGGCGCTGAGCAGTTGTTCTCCTCCTTGGCAATaGTCATGCCGTCTTTTACGT | + |
|
Preference number: 4 (lower is better) Translates to: TFALSLILTVMKQALSSCSPPWQ*SCRLLR Trigger: ACGTAAAAGACGGCATGACCATTGCCAAGGAGGAGA...ACAACTGCTCAGCGCCTGCTTCATCACCGTTAGGATTAAAGAAAGAGCAAACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTCTTGAATTTGAGGATTTaGATCACTGGTCCAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: TLVKGFLFGGAVCVAVFLLNLRI*ITGPKI Trigger: GATCTTTGGACCAGTGATGCAAATCCTCAAATTCAA...GAGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
||
| CDS-3UTR GCA 90 bp | CACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTTTGAATTTGAGGATTTaGATCACTGGTCCAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: HFGEGVSLWRRSVCGGFSLNLRI*ITGPKI Trigger: GATCTTTGGACCAGTGATGCAAATCCTCAAATTCAA...AGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
||
| CDS-3UTR CCA 90 bp | AGTCACTGCCACATTCTCTTATTCCCTGAAAATCTACCTTCACGGGCCATCACCTTGTTAATGAAGATCTaGTTGCAGAAGACCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SHCHILLFPENLPSRAITLLMKI*LQKTSG Trigger: GCCTGAGGTCTTCTGCAACCAGATCTTCATTAACAA...GGTGATGGCCCGTGAAGGTAGATTTTCAGGGAATAAGAGAATGTGGCAGTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR CCA 90 bp | TCCACAGTAGCTGACTATTTTATTCCAACCAGTCAAGCAGAGGGTACTGATCTCGAGGATTTGCATCACTaGTCCAAAGATCTCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: STVADYFIPTSQAEGTDLEDLHH*SKDLLL Trigger: AAGGAGGAGATCTTTGGACCAGTGATGCAAATCCTC...GAGATCAGTACCCTCTGCTTGACTGGTTGGAATAAAATAGTCAGCTACTGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS CCA 90 bp | TGCAGAAGACCTCAGGCTGATGGTTGGGGGCTGGCACCGCGCTGGTaGCGGCGGCGGACAACAGGCGGCTCAGGCGCGGTCCGCGGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: CRRPQADGWGLAPRW*RRRTTGGSGAVRGG Trigger: TCCGCCGCGGACCGCGCCTGAGCCGCCTGTTGTCCGCCGCCGCCACCAGCGCGGTGCCAGCCCCCAACCATCAGCCTGAGGTCTTCTGCA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000152945.3 |
||
| CDS CCA 90 bp | GGTTGCAGAAGACCTCAGGCTGATGGTTGGGGGCTGGCACCGCGCTaGTGGCGGCGGCGGACAACAGGCGGCTCAGGCGCGGTCCGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GCRRPQADGWGLAPR*WRRRTTGGSGAVRG Trigger: GCCGCGGACCGCGCCTGAGCCGCCTGTTGTCCGCCGCCGCCACCAGCGCGGTGCCAGCCCCCAACCATCAGCCTGAGGTCTTCTGCAACC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000152945.3 |
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| CDS CCA 90 bp | AATGAAGATCTGGTTGCAGAAGACCTCAGGCTGATGGTTGGGGGCTaGCACCGCGCTGGTGGCGGCGGCGGACAACAGGCGGCTCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: NEDLVAEDLRLMVGG*HRAGGGGGQQAAQA Trigger: CGCCTGAGCCGCCTGTTGTCCGCCGCCGCCACCAGCGCGGTGCCAGCCCCCAACCATCAGCCTGAGGTCTTCTGCAACCAGATCTTCATT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000152945.3 |
||
| CDS CCA 90 bp | CCAACCTCCGTGGAGCCTGTGAACGCCACTTTGTCCACACCCTCATaGGATGCGATGGCAGCCCCGGCGGTAGGGCCGAATCCGGGAACG | + |
|
Preference number: 5 (lower is better) Translates to: PTSVEPVNATLSTPS*DAMAAPAVGPNPGT Trigger: CGTTCCCGGATTCGGCCCTACCGCCGGGGCTGCCATCGCATCCCATGAGGGTGTGGACAAAGTGGCGTTCACAGGCTCCACGGAGGTTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGGGCTCTCACCGTCACAGCTCAGGAAGGGAGCCCATCACCCGCTTCGTGGGTTACTCTCTTGAGGTaGCTGCTCCCGGCGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: AWALTVTAQEGSPSPASWVTLLR*LLPAAT Trigger: GGTGGCCGCCGGGAGCAGCAACCTCAAGAGAGTAAC...CCACGAAGCGGGTGATGGGCTCCCTTCCTGAGCTGTGACGGTGAGAGCCCAGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS GCA 90 bp | GCGCCAGGGCGAGCCCAGCTGGAAGGCTGCACGAGCAGCCTTCACTaGCTTGTCTACGTCCTCCTTGTTCCCTTCGGCCACCTGGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: APGRAQLEGCTSSLH*LVYVLLVPFGHLAD Trigger: ATCTGCCAGGTGGCCGAAGGGAACAAGGAGGACGTAGACAAGGCAGTGAAGGCTGCTCGTGCAGCCTTCCAGCTGGGCTCGCCCTGGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 |
||
| CDS GCA 90 bp | CTCCGTGGAGCCTGTGAACGCCACTTTGTCCACACCCTCATGGGATaGGATGGCAGCCCCGGCGGTAGGGCCGAATCCGGGAACGATATT | + |
|
Preference number: 5 (lower is better) Translates to: LRGACERHFVHTLMG*DGSPGGRAESGNDI Trigger: AATATCGTTCCCGGATTCGGCCCTACCGCCGGGGCTGCCATCGCATCCCATGAGGGTGTGGACAAAGTGGCGTTCACAGGCTCCACGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 |
||
| CDS CCA 90 bp | CCTGCTCCGTCCGGCTGTCGAAGGGGTTCCCCACCACCCGAGACTTaGCCCGAGCCACGCTGCGTTCCACGAATTCGTCATACACATTCT | + |
|
Preference number: 5 (lower is better) Translates to: PAPSGCRRGSPPPET*PEPRCVPRIRHTHS Trigger: AGAATGTGTATGACGAATTCGTGGAACGCAGCGTGGCTCGGGCCAAGTCTCGGGTGGTGGGGAACCCCTTCGACAGCCGGACGGAGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 |
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| CDS GCA 90 bp | TGTCGAAGGGGTTCCCCACCACCCGAGACTTGGCCCGAGCCACGCTaGGTTCCACGAATTCGTCATACACATTCTCCTGCACGAAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CRRGSPPPETWPEPR*VPRIRHTHSPARRS Trigger: GGACCTTCGTGCAGGAGAATGTGTATGACGAATTCGTGGAACGCAGCGTGGCTCGGGCCAAGTCTCGGGTGGTGGGGAACCCCTTCGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 |
||
| CDS GCA 90 bp | TCTTCACTTCTGTGTACGCCTGCAGGCCATACTCGCCCAGCTCCCTaGCACTCCCTGACATCTTATAGCCCCCAAATGGAGACTGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLLCTPAGHTRPAP*HSLTSYSPQMETGP Trigger: GGGCCCAGTCTCCATTTGGGGGCTATAAGATGTCAGGGAGTGGCAGGGAGCTGGGCGAGTATGGCCTGCAGGCGTACACAGAAGTGAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 ENSMUST00000200541.5 |
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| CDS-3UTR CAA 90 bp | GTGATGAAGCAGGCGCTGAGCAGTTGTTTATGCTCAGCCTGGGCTCTCACCGTCTCCAGGGTTACTCTCTaGAGGTTGCTGCTCCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VMKQALSSCLCSAWALTVSRVTL*RLLLPA Trigger: CGCCGGGAGCAGCAACCTCAAGAGAGTAACCCTGGA...GACGGTGAGAGCCCAGGCTGAGCATAAACAACTGCTCAGCGCCTGCTTCATCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTAATCCTAACGGTGATGAAGCAGGCGCTGAGCAGTTGTTTATGCTCAGCCCCCACCACCCGAGACTaGGCCCGAGCCACGCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SLILTVMKQALSSCLCSAPTTRD*ARATLR Trigger: ACGCAGCGTGGCTCGGGCCAAGTCTCGGGTGGTGGG...GGCTGAGCATAAACAACTGCTCAGCGCCTGCTTCATCACCGTTAGGATTAAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
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| CDS-3UTR CAA 90 bp | GAACAGATTGGGAGAACAGAGCCACTTCTGGAAACTGTCTTTTGGCTGAATCGACCCACCACCCGAGACTaGGCCCGAGCCACGCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: EQIGRTEPLLETVFWLNRPTTRD*ARATLR Trigger: ACGCAGCGTGGCTCGGGCCAAGTCTCGGGTGGTGGG...TCGATTCAGCCAAAAGACAGTTTCCAGAAGTGGCTCTGTTCTCCCAATCTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS GCA 90 bp | GGACAGGTAATTGGCTTTATCCAGGTCCTTTGTGAAGACGGCGGCTaGCAGCCCATACTTAGAATCATTGGCCCGCCCCACAACCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GQVIGFIQVLCEDGG*QPILRIIGPPHNLL Trigger: GAGGAGGTTGTGGGGCGGGCCAATGATTCTAAGTATGGGCTGGCAGCCGCCGTCTTCACAAAGGACCTGGATAAAGCCAATTACCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000199369.5 ENSMUST00000200541.5 |
||
| CDS-3UTR CAA 90 bp | GTGATGAAGCAGGCGCTGAGCAGTTGTTTATGCTCAGCCTGGGCTCTCACCGTCTCCCCTGTGGAAGGGTaGACGGTGGGAAATGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VMKQALSSCLCSAWALTVSPVEG*TVGNVF Trigger: GAAAACATTTCCCACCGTCAACCCTTCCACAGGGGA...GACGGTGAGAGCCCAGGCTGAGCATAAACAACTGCTCAGCGCCTGCTTCATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAGACCTTGCACTGTGCACATGACATGGCTCTGCTCTGCTCTGTGCCTCAAGCCCAGTTTCCATGCTaGCATCAGGAGCGGGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RQTLHCAHDMALLCSVPQAQFPC*HQEREV Trigger: AACTTCCCGCTCCTGATGCAAGCATGGAAACTGGGC...TTGAGGCACAGAGCAGAGCAGAGCCATGTCATGTGCACAGTGCAAGGTCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR CAA 90 bp | TCACCGTCACAGCTCAGGAAGGGAGCCCATCACCCGCTTCGTGGGATCTGGAGGACCTCCTCGATGGTCTaGAATTTGAGGATTTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: SPSQLRKGAHHPLRGIWRTSSMV*NLRICI Trigger: GATGCAAATCCTCAAATTCAAGACCATCGAGGAGGT...CCTCCAGATCCCACGAAGCGGGTGATGGGCTCCCTTCCTGAGCTGTGACGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS TCA 90 bp | AGCGGAGACATTTCAGGACCATGTCCAAATCCACCAGGTACGAGATaGCATAAGGCTTGCCGTTGTCCAGGGTCTCCAAGGCCGCTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SGDISGPCPNPPGTR*HKACRCPGSPRPLG Trigger: ACCTAGCGGCCTTGGAGACCCTGGACAACGGCAAGCCTTATGTCATCTCGTACCTGGTGGATTTGGACATGGTCCTGAAATGTCTCCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000152945.3 ENSMUST00000199369.5 |
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| CDS GCA 90 bp | TTCTGTGGCACTTTGACAGTAACCGTCTTCACTTCTGTGTACGCCTaGAGGCCATACTCGCCCAGCTCCCTGCCACTCCCTGACATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: FCGTLTVTVFTSVYA*RPYSPSSLPLPDIL Trigger: TAAGATGTCAGGGAGTGGCAGGGAGCTGGGCGAGTATGGCCTGCAGGCGTACACAGAAGTGAAGACGGTTACTGTCAAAGTGCCACAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 ENSMUST00000200541.5 |
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| CDS-3UTR CAA 90 bp | CAAGACACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTAATCCGGGAACGATATaGACCACGCCAGGGGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QDTLVKGFLFGGAVCVAVNPGTI*TTPGGK Trigger: CTTTCCCCCTGGCGTGGTCAATATCGTTCCCGGATT...AACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTGTCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR CAA 90 bp | GGGGACGGTGTCCTTCTCCGGCATAGGAGAACCAATTCTGGGGTTCGAGATATTAATCCGGGAACGATATaGACCACGCCAGGGGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GDGVLLRHRRTNSGVRDINPGTI*TTPGGK Trigger: CTTTCCCCCTGGCGTGGTCAATATCGTTCCCGGATT...AATATCTCGAACCCCAGAATTGGTTCTCCTATGCCGGAGAAGGACACCGTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
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| CDS-3UTR CAA 90 bp | GGACAGGGCAGGGTTGGGATAGTCACAGTAACCCCATTTATACACAGGGCAGAGCCTGTGAACGCCACTTaGTCCACACCCTCATGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GQGRVGIVTVTPFIHRAEPVNAT*STPSWD Trigger: ATCCCATGAGGGTGTGGACAAAGTGGCGTTCACAGG...CTCTGCCCTGTGTATAAATGGGGTTACTGTGACTATCCCAACCCTGCCCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR CAA 90 bp | GGGGACGGTGTCCTTCTCCGGCATAGGAGAACCAATTCTGGGGTTCGAGATATTCCTGTGAACGCCACTTaGTCCACACCCTCATGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GDGVLLRHRRTNSGVRDIPVNAT*STPSWD Trigger: ATCCCATGAGGGTGTGGACAAAGTGGCGTTCACAGG...AATATCTCGAACCCCAGAATTGGTTCTCCTATGCCGGAGAAGGACACCGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR CAA 90 bp | CAAGACACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTCCCCTGTGGAAGGGTaGACGGTGGGAAATGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QDTLVKGFLFGGAVCVAVSPVEG*TVGNVF Trigger: GAAAACATTTCCCACCGTCAACCCTTCCACAGGGGA...AACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTGTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR CAA 90 bp | CACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTGCCCAGTTTCCATGCTaGCATCAGGAGCGGGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HFGEGVSLWRRSVCGGFSAQFPC*HQEREV Trigger: AACTTCCCGCTCCTGATGCAAGCATGGAAACTGGGC...AGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
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| CDS-3UTR CAA 90 bp | GAACAGATTGGGAGAACAGAGCCACTTCTGGAAACTGTCTTTTGGCTGAATCGAGTTACTCTCTTGAGGTaGCTGCTCCCGGCGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: EQIGRTEPLLETVFWLNRVTLLR*LLPAAT Trigger: GGTGGCCGCCGGGAGCAGCAACCTCAAGAGAGTAAC...TCGATTCAGCCAAAAGACAGTTTCCAGAAGTGGCTCTGTTCTCCCAATCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR CAA 90 bp | ACCTTCTGGTACAAGAGGGAGAAAGCTCACGTAACTGGAGCCCTGCTCAAGAGCCCAAAGATCTCCTCCTaGGCAATGGTCATGCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TFWYKREKAHVTGALLKSPKISS*AMVMPS Trigger: AGACGGCATGACCATTGCCAAGGAGGAGATCTTTGG...GCTCTTGAGCAGGGCTCCAGTTACGTGAGCTTTCTCCCTCTTGTACCAGAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR CAA 90 bp | CACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTGCCAGCCTGCAGAGCTaGGGACAGGTAATTGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HFGEGVSLWRRSVCGGFSASLQS*GQVIGF Trigger: AAAGCCAATTACCTGTCCCAAGCTCTGCAGGCTGGC...AGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
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| CDS GCA 90 bp | GTGGAAGGGTTGACGGTGGGAAATGTTTTCCTGCTGACGGCGTCGTaGCACTCATTGTTAATGAAGATCTGGTTGCAGAAGACCTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VEGLTVGNVFLLTAS*HSLLMKIWLQKTSG Trigger: GCCTGAGGTCTTCTGCAACCAGATCTTCATTAACAATGAGTGGCACGACGCCGTCAGCAGGAAAACATTTCCCACCGTCAACCCTTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000152945.3 |
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| CDS-3UTR CAA 90 bp | CCCCATTTATACACAGGGCAGAGGTCACAGGTAGCTAAAACCTCTAGGAATGGATTGTCTACGTCCTCCTaGTTCCCTTCGGCCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PHLYTGQRSQVAKTSRNGLSTSS*FPSATW Trigger: CCAGGTGGCCGAAGGGAACAAGGAGGACGTAGACAA...TCCATTCCTAGAGGTTTTAGCTACCTGTGACCTCTGCCCTGTGTATAAATGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR CAA 90 bp | ACTTGTGAGAACCAAGATCCCAGGTACCAAGATGGGGATGAGGGTAATGAGATATCCAGGGTTACTCTCTaGAGGTTGCTGCTCCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TCENQDPRYQDGDEGNEISRVTL*RLLLPA Trigger: CGCCGGGAGCAGCAACCTCAAGAGAGTAACCCTGGA...TATCTCATTACCCTCATCCCCATCTTGGTACCTGGGATCTTGGTTCTCACAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR CAA 90 bp | TGCAGCCCCATCCACGTTTGCTCTTTCTTTAATCCTAACGGTGATGAAGCAGGCGCCAGCCTGCAGAGCTaGGGACAGGTAATTGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CSPIHVCSFFNPNGDEAGASLQS*GQVIGF Trigger: AAAGCCAATTACCTGTCCCAAGCTCTGCAGGCTGGC...GCCTGCTTCATCACCGTTAGGATTAAAGAAAGAGCAAACGTGGATGGGGCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
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| CDS-3UTR CAA 90 bp | CCCCATTTATACACAGGGCAGAGGTCACAGGTAGCTAAAACCTCTAGGAATGGAGCCAGCCTGCAGAGCTaGGGACAGGTAATTGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PHLYTGQRSQVAKTSRNGASLQS*GQVIGF Trigger: AAAGCCAATTACCTGTCCCAAGCTCTGCAGGCTGGC...TCCATTCCTAGAGGTTTTAGCTACCTGTGACCTCTGCCCTGTGTATAAATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
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| CDS-3UTR CAA 90 bp | ACGTTTGCTCTTTCTTTAATCCTAACGGTGATGAAGCAGGCGCTGAGCAGTTGTGCCCAGTTTCCATGCTaGCATCAGGAGCGGGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TFALSLILTVMKQALSSCAQFPC*HQEREV Trigger: AACTTCCCGCTCCTGATGCAAGCATGGAAACTGGGC...ACAACTGCTCAGCGCCTGCTTCATCACCGTTAGGATTAAAGAAAGAGCAAACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTAATCCTAACGGTGATGAAGCAGGCGCTGAGCAGTTGTTTATGCTCAGCCCCAAAGATCTCCTCCTaGGCAATGGTCATGCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLILTVMKQALSSCLCSAPKISS*AMVMPS Trigger: AGACGGCATGACCATTGCCAAGGAGGAGATCTTTGG...GGCTGAGCATAAACAACTGCTCAGCGCCTGCTTCATCACCGTTAGGATTAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
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| CDS-3UTR CAA 90 bp | AGCCCCATCCACGTTTGCTCTTTCTTTAATCCTAACGGTGATGAAGCAGGCGCTGCGTCGTGCCACTCATaGTTAATGAAGATCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPIHVCSFFNPNGDEAGAASCHS*LMKIWL Trigger: CAACCAGATCTTCATTAACAATGAGTGGCACGACGC...AGCGCCTGCTTCATCACCGTTAGGATTAAAGAAAGAGCAAACGTGGATGGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGTTCTGGTAGTTCGAGAGGCAGACCTTGCACTGTGCACATGACATGGCTCTCGATGGTCTTGAATTaGAGGATTTGCATCACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LGSGSSRGRPCTVHMTWLSMVLN*RICITG Trigger: ACCAGTGATGCAAATCCTCAAATTCAAGACCATCGA...GAGCCATGTCATGTGCACAGTGCAAGGTCTGCCTCTCGAACTACCAGAACCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR CAA 90 bp | TTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTCAGACCTCCTCGATGGTCTaGAATTTGAGGATTTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: FGEGVSLWRRSVCGGFSQTSSMV*NLRICI Trigger: GATGCAAATCCTCAAATTCAAGACCATCGAGGAGGT...CTGAGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
||
| CDS-3UTR CAA 90 bp | CACTTTGGTGAAGGGGTTTCTCTTTGGAGGCGCAGTGTGTGTGGCGGTTTTTCTTCGATGGTCTTGAATTaGAGGATTTGCATCACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HFGEGVSLWRRSVCGGFSSMVLN*RICITG Trigger: ACCAGTGATGCAAATCCTCAAATTCAAGACCATCGA...AGAAAAACCGCCACACACACTGCGCCTCCAAAGAGAAACCCCTTCACCAAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 |
||
| CDS-3UTR CAA 90 bp | GAACAGATTGGGAGAACAGAGCCACTTCTGGAAACTGTCTTTTGGCTGAATCGAGCGTCGTGCCACTCATaGTTAATGAAGATCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EQIGRTEPLLETVFWLNRASCHS*LMKIWL Trigger: CAACCAGATCTTCATTAACAATGAGTGGCACGACGC...TCGATTCAGCCAAAAGACAGTTTCCAGAAGTGGCTCTGTTCTCCCAATCTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS-3UTR CAA 90 bp | TGCAGCCCCATCCACGTTTGCTCTTTCTTTAATCCTAACGGTGATGAAGCAGGCTCGATGGTCTTGAATTaGAGGATTTGCATCACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: CSPIHVCSFFNPNGDEAGSMVLN*RICITG Trigger: ACCAGTGATGCAAATCCTCAAATTCAAGACCATCGA...GCCTGCTTCATCACCGTTAGGATTAAAGAAAGAGCAAACGTGGATGGGGCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129753.8 |
||
| CDS-3UTR CAA 90 bp | AGTCACTGCCACATTCTCTTATTCCCTGAAAATCTACCTTCACGGGCCATCACCACCTCCTCGATGGTCTaGAATTTGAGGATTTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: SHCHILLFPENLPSRAITTSSMV*NLRICI Trigger: GATGCAAATCCTCAAATTCAAGACCATCGAGGAGGT...GGTGATGGCCCGTGAAGGTAGATTTTCAGGGAATAAGAGAATGTGGCAGTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031411.15 |
||
| CDS CCA 72 bp | AGACCTCAGGCTGATGGTTGGGGGCTGGCACCGCGCTaGTGGCGGCGGCGGACAACAGGCGGCTCAGGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: RPQADGWGLAPR*WRRRTTGGSGA Trigger: CGCGCCTGAGCCGCCTGTTGTCCGCCGCCGCCACCAGCGCGGTGCCAGCCCCCAACCATCAGCCTGAGGTCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000152945.3 |
||
| CDS CCA 72 bp | CTGGTTGCAGAAGACCTCAGGCTGATGGTTGGGGGCTaGCACCGCGCTGGTGGCGGCGGCGGACAACAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LVAEDLRLMVGG*HRAGGGGGQQA Trigger: CGCCTGTTGTCCGCCGCCGCCACCAGCGCGGTGCCAGCCCCCAACCATCAGCCTGAGGTCTTCTGCAACCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000152945.3 |
||
| CDS GCA 72 bp | GCCTGTGAACGCCACTTTGTCCACACCCTCATGGGATaGGATGGCAGCCCCGGCGGTAGGGCCGAATCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: ACERHFVHTLMG*DGSPGGRAESG Trigger: CCCGGATTCGGCCCTACCGCCGGGGCTGCCATCGCATCCCATGAGGGTGTGGACAAAGTGGCGTTCACAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 |
||
| CDS CAA 72 bp | GTCCGGCTGTCGAAGGGGTTCCCCACCACCCGAGACTaGGCCCGAGCCACGCTGCGTTCCACGAATTCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VRLSKGFPTTRD*ARATLRSTNSS Trigger: TGACGAATTCGTGGAACGCAGCGTGGCTCGGGCCAAGTCTCGGGTGGTGGGGAACCCCTTCGACAGCCGGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 |
||
| CDS CCA 72 bp | GTGGAGCCTGTGAACGCCACTTTGTCCACACCCTCATaGGATGCGATGGCAGCCCCGGCGGTAGGGCCGAAT | + |
|
Preference number: 6 (lower is better) Translates to: VEPVNATLSTPS*DAMAAPAVGPN Trigger: ATTCGGCCCTACCGCCGGGGCTGCCATCGCATCCCATGAGGGTGTGGACAAAGTGGCGTTCACAGGCTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 |
||
| CDS CCA 72 bp | TCCGGCTGTCGAAGGGGTTCCCCACCACCCGAGACTTaGCCCGAGCCACGCTGCGTTCCACGAATTCGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SGCRRGSPPPET*PEPRCVPRIRH Trigger: ATGACGAATTCGTGGAACGCAGCGTGGCTCGGGCCAAGTCTCGGGTGGTGGGGAACCCCTTCGACAGCCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 |
||
| CDS CAA 90 bp | CCCTGCTCCGTCCGGCTGTCGAAGGGGTTCCCCACCACCCGAGACTaGGCCCGAGCCACGCTGCGTTCCACGAATTCGTCATACACATTC | + |
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Preference number: 6 (lower is better) Translates to: PCSVRLSKGFPTTRD*ARATLRSTNSSYTF Trigger: GAATGTGTATGACGAATTCGTGGAACGCAGCGTGGCTCGGGCCAAGTCTCGGGTGGTGGGGAACCCCTTCGACAGCCGGACGGAGCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 |
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| CDS TCA 72 bp | TCTCCAAGGCCGCTAGGTAGGTCCGGTCCCGTTCAATaGGATCCGCCAATCGGTACAACAGCCGGCCCCGGT | + |
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Preference number: 6 (lower is better) Translates to: SPRPLGRSGPVQ*DPPIGTTAGPG Trigger: ACCGGGGCCGGCTGTTGTACCGATTGGCGGATCTCATTGAACGGGACCGGACCTACCTAGCGGCCTTGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000152945.3 ENSMUST00000199369.5 |
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| CDS GCA 72 bp | CGAGCCCAGCTGGAAGGCTGCACGAGCAGCCTTCACTaGCTTGTCTACGTCCTCCTTGTTCCCTTCGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: RAQLEGCTSSLH*LVYVLLVPFGH Trigger: GTGGCCGAAGGGAACAAGGAGGACGTAGACAAGGCAGTGAAGGCTGCTCGTGCAGCCTTCCAGCTGGGCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 |
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| CDS GCA 72 bp | CGAGCCCAGCTGGAAGGCTGCACGAGCAGCCTTCACTaGCTTGTCTACGTCCTTGTTCCCTTCGGCCACCTG | + |
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Preference number: 6 (lower is better) Translates to: RAQLEGCTSSLH*LVYVLVPFGHL Trigger: CAGGTGGCCGAAGGGAACAAGGACGTAGACAAGGCAGTGAAGGCTGCTCGTGCAGCCTTCCAGCTGGGCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152945.3 |
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| CDS CAA 72 bp | CCCAGCTGGAAGGCTGCACGAGCAGCCTTCACTGCCTaGTCTACGTCCTTGTTCCCTTCGGCCACCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PSWKAARAAFTA*STSLFPSATWQ Trigger: CTGCCAGGTGGCCGAAGGGAACAAGGACGTAGACAAGGCAGTGAAGGCTGCTCGTGCAGCCTTCCAGCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152945.3 |
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| CDS CCA 72 bp | CACCTTCATCACCACCACGTTCCCGGTTGCCAGGGCTaGGCCCAGTTTCCATGCTTGCATCAGGAGCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: HLHHHHVPGCQG*AQFPCLHQERE Trigger: TTCCCGCTCCTGATGCAAGCATGGAAACTGGGCCCAGCCCTGGCAACCGGGAACGTGGTGGTGATGAAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000199369.5 |
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| CDS GCA 72 bp | GGTTCCCCACCACCCGAGACTTGGCCCGAGCCACGCTaGGTTCCACGAATTCGTCATACACATTCTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GSPPPETWPEPR*VPRIRHTHSPA Trigger: TGCAGGAGAATGTGTATGACGAATTCGTGGAACGCAGCGTGGCTCGGGCCAAGTCTCGGGTGGTGGGGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 |
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| CDS GCA 72 bp | CTGTGTACGCCTGCAGGCCATACTCGCCCAGCTCCCTaGCACTCCCTGACATCTTATAGCCCCCAAATGGAG | + |
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Preference number: 6 (lower is better) Translates to: LCTPAGHTRPAP*HSLTSYSPQME Trigger: CTCCATTTGGGGGCTATAAGATGTCAGGGAGTGGCAGGGAGCTGGGCGAGTATGGCCTGCAGGCGTACACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 ENSMUST00000200541.5 |
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| CDS CAA 90 bp | ACGGTCCGCGGCAGCGCCCCCACCACACAGCAGCTTCGCCCCTTCTaGTTGTCCCGATTTGATGTAGCCGAGGATCTTCTTAAACTGAGT | + |
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Preference number: 6 (lower is better) Translates to: TVRGSAPTTQQLRPF*LSRFDVAEDLLKLS Trigger: ACTCAGTTTAAGAAGATCCTCGGCTACATCAAATCGGGACAACAAGAAGGGGCGAAGCTGCTGTGTGGTGGGGGCGCTGCCGCGGACCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000200541.5 |
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| CDS CAA 90 bp | GTCCGCGGCAGCGCCCCCACCACACAGCAGCTTCGCCCCTTCTTGTaGTCCCGATTTGATGTAGCCGAGGATCTTCTTAAACTGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: VRGSAPTTQQLRPFL*SRFDVAEDLLKLSF Trigger: GAAACTCAGTTTAAGAAGATCCTCGGCTACATCAAATCGGGACAACAAGAAGGGGCGAAGCTGCTGTGTGGTGGGGGCGCTGCCGCGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000200541.5 |
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| CDS TCA 72 bp | GTCCACACACGCCCACAGGCTCATGGCGGGTATAGCTaGAGAAGTCGCCGTCGATGGGAATGGTTTTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: VHTRPQAHGGYS*RSRRRWEWFSH Trigger: ATGGGAAAACCATTCCCATCGACGGCGACTTCTTCAGCTATACCCGCCATGAGCCTGTGGGCGTGTGTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000152945.3 ENSMUST00000199369.5 |
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| CDS GCA 72 bp | ACTTTGACAGTAACCGTCTTCACTTCTGTGTACGCCTaGAGGCCATACTCGCCCAGCTCCCTGCCACTCCCT | + |
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Preference number: 6 (lower is better) Translates to: TLTVTVFTSVYA*RPYSPSSLPLP Trigger: AGGGAGTGGCAGGGAGCTGGGCGAGTATGGCCTGCAGGCGTACACAGAAGTGAAGACGGTTACTGTCAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031411.15 ENSMUST00000199369.5 ENSMUST00000200541.5 |
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| CDS CAA 72 bp | GTGAAGACGGCGGCTGCCAGCCCATACTTAGAATCATaGGCCCGCCCCACAACCTCCTCGATGGTCTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: VKTAAASPYLES*ARPTTSSMVLN Trigger: ATTCAAGACCATCGAGGAGGTTGTGGGGCGGGCCAATGATTCTAAGTATGGGCTGGCAGCCGCCGTCTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000199369.5 ENSMUST00000200541.5 |
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| CDS GCA 72 bp | ATTGGCTTTATCCAGGTCCTTTGTGAAGACGGCGGCTaGCAGCCCATACTTAGAATCATTGGCCCGCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: IGFIQVLCEDGG*QPILRIIGPPH Trigger: GTGGGGCGGGCCAATGATTCTAAGTATGGGCTGGCAGCCGCCGTCTTCACAAAGGACCTGGATAAAGCCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000199369.5 ENSMUST00000200541.5 |
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| CDS GCA 72 bp | GAGTTTCATCCACCCGAGACTTGGCCCGAGCCACGCTaGGTTCCACGAATTCGTCATACACATTCTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: EFHPPETWPEPR*VPRIRHTHSPA Trigger: TGCAGGAGAATGTGTATGACGAATTCGTGGAACGCAGCGTGGCTCGGGCCAAGTCTCGGGTGGATGAAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200541.5 |
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| CDS CAA 72 bp | AGCGCCCCCACCACACAGCAGCTTCGCCCCTTCTTGTaGTCCCGATTTGATGTAGCCGAGGATCTTCTTAAA | + |
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Preference number: 6 (lower is better) Translates to: SAPTTQQLRPFL*SRFDVAEDLLK Trigger: TTTAAGAAGATCCTCGGCTACATCAAATCGGGACAACAAGAAGGGGCGAAGCTGCTGTGTGGTGGGGGCGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000200541.5 |
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| CDS CAA 90 bp | AGGTCCTTTGTGAAGACGGCGGCTGCCAGCCCATACTTAGAATCATaGGCCCGCCCCACAACCTCCTCGATGGTCTTGAATTTGAGGATT | + |
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Preference number: 6 (lower is better) Translates to: RSFVKTAAASPYLES*ARPTTSSMVLNLRI Trigger: AATCCTCAAATTCAAGACCATCGAGGAGGTTGTGGGGCGGGCCAATGATTCTAAGTATGGGCTGGCAGCCGCCGTCTTCACAAAGGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000199369.5 ENSMUST00000200541.5 |
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| CDS TCA 72 bp | ATTTCAGGACCATGTCCAAATCCACCAGGTACGAGATaGCATAAGGCTTGCCGTTGTCCAGGGTCTCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: ISGPCPNPPGTR*HKACRCPGSPR Trigger: CCTTGGAGACCCTGGACAACGGCAAGCCTTATGTCATCTCGTACCTGGTGGATTTGGACATGGTCCTGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000152945.3 ENSMUST00000199369.5 |
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| CDS CAA 72 bp | GAATCATTGGCCCGCCCCACAACCTCCTCGATGGTCTaGAATTTGAGGATTTGCATCACTGGTCCAAAGATC | + |
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Preference number: 6 (lower is better) Translates to: ESLARPTTSSMV*NLRICITGPKI Trigger: GATCTTTGGACCAGTGATGCAAATCCTCAAATTCAAGACCATCGAGGAGGTTGTGGGGCGGGCCAATGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000199369.5 ENSMUST00000200541.5 |
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| CDS GCA 72 bp | TTGACGGTGGGAAATGTTTTCCTGCTGACGGCGTCGTaGCACTCATTGTTAATGAAGATCTGGTTGCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LTVGNVFLLTAS*HSLLMKIWLQK Trigger: CTTCTGCAACCAGATCTTCATTAACAATGAGTGGCACGACGCCGTCAGCAGGAAAACATTTCCCACCGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031411.15 ENSMUST00000129753.8 ENSMUST00000152945.3 |
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| CDS CCA 72 bp | CTCCTCGATGGTCTTGAATTTGAGGATTTGCATCACTaGTCCAAAGATCTCCTTGATCAAGTTGGCCACGTA | + |
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Preference number: 6 (lower is better) Translates to: LLDGLEFEDLHH*SKDLLDQVGHV Trigger: TACGTGGCCAACTTGATCAAGGAGATCTTTGGACCAGTGATGCAAATCCTCAAATTCAAGACCATCGAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199369.5 |
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