Pregenerated sensors for ALDH1L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020256Ensembl transcript IDs: ENSMUST00000020497.14, ENSMUST00000146640.8
Found 277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GGGTGTGCGCCAGGGCTTTGTGTACCTGTCATCCTCAGAGGAGACTaGCTGGTTCTCACTGAGCCTTTCCTTTATTGGCCAATGTATGCG | + |
Preference number: 1 (lower is better) Translates to: GCAPGLCVPVILRGD*LVLTEPFLYWPMYA Trigger: CGCATACATTGGCCAATAAAGGAAAGGCTCAGTGAGAACCAGCCAGTCTCCTCTGAGGATGACAGGTACACAAAGCCCTGGCGCACACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR CCA 90 bp | GTGCGCCAGGGCTTTGTGTACCTGTCATCCTCAGAGGAGACTGGCTaGTTCTCACTGAGCCTTTCCTTTATTGGCCAATGTATGCGTGTA | + |
Preference number: 1 (lower is better) Translates to: VRQGFVYLSSSEETG*FSLSLSFIGQCMRV Trigger: TACACGCATACATTGGCCAATAAAGGAAAGGCTCAGTGAGAACCAGCCAGTCTCCTCTGAGGATGACAGGTACACAAAGCCCTGGCGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR TCA 90 bp | ATGTCAGTGGTGATAATCAAACTTGAGTCACAGTGGGAAACCTTGTaGGCACCGCACAGGATCAGTGGCCATCCTGAAGAGGCACGATGC | + |
Preference number: 1 (lower is better) Translates to: MSVVIIKLESQWETL*APHRISGHPEEARC Trigger: GCATCGTGCCTCTTCAGGATGGCCACTGATCCTGTGCGGTGCTCACAAGGTTTCCCACTGTGACTCAAGTTTGATTATCACCACTGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR CCA 90 bp | AGTCACAGAGCTTACCATCATCTTCCATGTAACAAATGGAGACTTTaGAGACAGGAGGTCACTGACTCCCCTGACCACACACAGCCAGTG | + |
Preference number: 1 (lower is better) Translates to: SHRAYHHLPCNKWRL*RQEVTDSPDHTQPV Trigger: CACTGGCTGTGTGTGGTCAGGGGAGTCAGTGACCTCCTGTCTCCAAAGTCTCCATTTGTTACATGGAAGATGATGGTAAGCTCTGTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR CCA 90 bp | GTACATTGCTGTGTATCTGCTGCTCTGTGTGAGGCCCTCAGTGCCTaGCACATGGCCTTACTTGGGATGGAATATATAGCGTCAATAAAC | + |
Preference number: 1 (lower is better) Translates to: VHCCVSAALCEALSA*HMALLGMEYIASIN Trigger: GTTTATTGACGCTATATATTCCATCCCAAGTAAGGCCATGTGCCAGGCACTGAGGGCCTCACACAGAGCAGCAGATACACAGCAATGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR CCA 90 bp | CACCAAGTAAGTCACAGAGCTTACCATCATCTTCCATGTAACAAATaGAGACTTTGGAGACAGGAGGTCACTGACTCCCCTGACCACACA | + |
Preference number: 1 (lower is better) Translates to: HQVSHRAYHHLPCNK*RLWRQEVTDSPDHT Trigger: TGTGTGGTCAGGGGAGTCAGTGACCTCCTGTCTCCAAAGTCTCCATTTGTTACATGGAAGATGATGGTAAGCTCTGTGACTTACTTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR GCA 90 bp | TTGCTGCACATCAGTTCTGTGCTCAGGAATTCCCCTTTGTCTGGTTaGATGTCAGTGGTGATAATCAAACTTGAGTCACAGTGGGAAACC | + |
Preference number: 1 (lower is better) Translates to: LLHISSVLRNSPLSG*MSVVIIKLESQWET Trigger: GGTTTCCCACTGTGACTCAAGTTTGATTATCACCACTGACATGCAACCAGACAAAGGGGAATTCCTGAGCACAGAACTGATGTGCAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR CCA 90 bp | AGCTCAGACAAGTTGGGTAGTTTTCCCCCAACTCACACAGTAAGCTaGTATAATATGACCACGACTGACCATCACAGGCACTTTACTAGG | + |
Preference number: 1 (lower is better) Translates to: SSDKLGSFPPTHTVS*YNMTTTDHHRHFTR Trigger: CCTAGTAAAGTGCCTGTGATGGTCAGTCGTGGTCATATTATACCAGCTTACTGTGTGAGTTGGGGGAAAACTACCCAACTTGTCTGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR CCA 90 bp | AGACACAGAGAGACTGAGCACACAAGAAAGAGCAAAGCATCACTGTaGCCCTCCACACATTACTTTGACTCATGTACTATGGCAGAGTAC | + |
Preference number: 1 (lower is better) Translates to: RHRETEHTRKSKASL*PSTHYFDSCTMAEY Trigger: GTACTCTGCCATAGTACATGAGTCAAAGTAATGTGTGGAGGGCCACAGTGATGCTTTGCTCTTTCTTGTGTGCTCAGTCTCTCTGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR GCA 90 bp | TTTGGGGACTATCTCCCTAGTCATCACAAGAAATTAATGGATTGCTaGACATCAGTTCTGTGCTCAGGAATTCCCCTTTGTCTGGTTGCA | + |
Preference number: 1 (lower is better) Translates to: FGDYLPSHHKKLMDC*TSVLCSGIPLCLVA Trigger: TGCAACCAGACAAAGGGGAATTCCTGAGCACAGAACTGATGTGCAGCAATCCATTAATTTCTTGTGATGACTAGGGAGATAGTCCCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR GCA 90 bp | CTTCCTTCTCATAGGAGAAAGGAAGAAGACAGGTGTCACATTCTCTaGAGGATAAACTGGTGTTTGAATGCACAGCTAAGAAAGGGTTGT | + |
Preference number: 1 (lower is better) Translates to: LPSHRRKEEDRCHIL*RINWCLNAQLRKGC Trigger: ACAACCCTTTCTTAGCTGTGCATTCAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTCCTATGAGAAGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR TCA 90 bp | CTGTGTTATGCACTGTGTAAGAAGAATGGGCAGGGAAGAGTAATCTaGGCCTTGATTATTGAGAAGTATAGGAAGTTCATTTCATCCATC | + |
Preference number: 1 (lower is better) Translates to: LCYALCKKNGQGRVI*ALIIEKYRKFISSI Trigger: GATGGATGAAATGAACTTCCTATACTTCTCAATAATCAAGGCTCAGATTACTCTTCCCTGCCCATTCTTCTTACACAGTGCATAACACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR TCA 90 bp | AAAGTTCTTGGGCTTAAGTATCAGTTGATTCCTGATCCGTGGTTCTaGAGAAAACAGAATGTGTTTCTAGCAAATTCTAACCTGTGGACT | + |
Preference number: 1 (lower is better) Translates to: KVLGLKYQLIPDPWF*RKQNVFLANSNLWT Trigger: AGTCCACAGGTTAGAATTTGCTAGAAACACATTCTGTTTTCTTCAGAACCACGGATCAGGAATCAACTGATACTTAAGCCCAAGAACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR TCA 90 bp | AGACAGGAGGTCACTGACTCCCCTGACCACACACAGCCAGTGAGCAGCAGAGCCTGCCCTGCCCTGGCCTaGGTCTGGGGTTGCAGGCAT | + |
Preference number: 2 (lower is better) Translates to: RQEVTDSPDHTQPVSSRACPALA*VWGCRH Trigger: ATGCCTGCAACCCCAGACTCAGGCCAGGGCAGGGCA...GGCTCTGCTGCTCACTGGCTGTGTGTGGTCAGGGGAGTCAGTGACCTCCTGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR GCA 90 bp | AGACAGGAGGTCACTGACTCCCCTGACCACACACAGCCAGTGAGCAGCAGAGCCATAAGGACCCTGCCCTaGCCTGGCCTGAGTCTGGGG | + |
Preference number: 2 (lower is better) Translates to: RQEVTDSPDHTQPVSSRAIRTLP*PGLSLG Trigger: CCCCAGACTCAGGCCAGGGCAGGGCAGGGTCCTTAT...GGCTCTGCTGCTCACTGGCTGTGTGTGGTCAGGGGAGTCAGTGACCTCCTGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR GCA 90 bp | CATAGCCTGGTTGACCTCAGGTCAGCAATAAGGACCCTGCCCTGCCCTGGCCTGGAAAGGCTCAGAAGCTaGCTGTCTGTCACAGTGGGT | + |
Preference number: 2 (lower is better) Translates to: HSLVDLRSAIRTLPCPGLERLRS*LSVTVG Trigger: ACCCACTGTGACAGACAGGCAGCTTCTGAGCCTTTC...CAGGCCAGGGCAGGGCAGGGTCCTTATTGCTGACCTGAGGTCAACCAGGCTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR-3UTR CCA 90 bp | AGACAGGAGGTCACTGACTCCCCTGACCACACACAGCCAGTGAGCAGCAGAGCCTCACTGCACGGCAGTTaGCAGCATCCTGCTGTGTTA | + |
Preference number: 2 (lower is better) Translates to: RQEVTDSPDHTQPVSSRASLHGS*QHPAVL Trigger: TAACACAGCAGGATGCTGCCAACTGCCGTGCAGTGA...GGCTCTGCTGCTCACTGGCTGTGTGTGGTCAGGGGAGTCAGTGACCTCCTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR CCA 90 bp | GCTTGTGTATTGCAGTACATTGCTGTGTATCTGCTGCTCTGTGTGAGGCCCTCAGACCCTGCCCTGCCCTaGCCTGAGTCTGGGGTTGCA | + |
Preference number: 2 (lower is better) Translates to: ACVLQYIAVYLLLCVRPSDPALP*PESGVA Trigger: TGCAACCCCAGACTCAGGCCAGGGCAGGGCAGGGTC...TGAGGGCCTCACACAGAGCAGCAGATACACAGCAATGTACTGCAATACACAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR CCA 90 bp | AGACAGGAGGTCACTGACTCCCCTGACCACACACAGCCAGTGAGCAGCAGAGCCAGAGCTCAGACAAGTTaGGTAGTTTTCCCCCAACTC | + |
Preference number: 2 (lower is better) Translates to: RQEVTDSPDHTQPVSSRARAQTS*VVFPQL Trigger: GAGTTGGGGGAAAACTACCCAACTTGTCTGAGCTCT...GGCTCTGCTGCTCACTGGCTGTGTGTGGTCAGGGGAGTCAGTGACCTCCTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR TCA 90 bp | CCTGGAGACAGCAAAGTAAGCATCCAAGGACAAGGTGACCCTTTTCCTGGTGCCAGGGTCTTCAGCTCCTaGAGCATTGAAGTGGGCTGT | + |
Preference number: 2 (lower is better) Translates to: PGDSKVSIQGQGDPFPGARVFSS*SIEVGC Trigger: ACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCT...GGCACCAGGAAAAGGGTCACCTTGTCCTTGGATGCTTACTTTGCTGTCTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR CCA 90 bp | CATAGCCTGGTTGACCTCAGGTCAGCAATAAGGACCCTGCCCTGCCCTGGCCTGCTCTGCAGGATAAACTaGTGTTTGAATGCACAGCTA | + |
Preference number: 2 (lower is better) Translates to: HSLVDLRSAIRTLPCPGLLCRIN*CLNAQL Trigger: TAGCTGTGCATTCAAACACCAGTTTATCCTGCAGAG...CAGGCCAGGGCAGGGCAGGGTCCTTATTGCTGACCTGAGGTCAACCAGGCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR-3UTR GCA 90 bp | CATAGCCTGGTTGACCTCAGGTCAGCAATAAGGACCCTGCCCTGCCCTGGCCTGAAACTGGTGTTTGAATaGACAGCTAAGAAAGGGTTG | + |
Preference number: 2 (lower is better) Translates to: HSLVDLRSAIRTLPCPGLKLVFE*TAKKGL Trigger: CAACCCTTTCTTAGCTGTGCATTCAAACACCAGTTT...CAGGCCAGGGCAGGGCAGGGTCCTTATTGCTGACCTGAGGTCAACCAGGCTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR-3UTR TCA 90 bp | AACCCTCTTCTTGGTTCTAGTATCTACTTTGTGGCTTCCAGACGGCCCCTCCTTAGGGTCTTCAGCTCCTaGAGCATTGAAGTGGGCTGT | + |
Preference number: 2 (lower is better) Translates to: NPLLGSSIYFVASRRPLLRVFSS*SIEVGC Trigger: ACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCT...AAGGAGGGGCCGTCTGGAAGCCACAAAGTAGATACTAGAACCAAGAAGAGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR-3UTR TCA 90 bp | CCAGCAGATACAGTCGTGAGAAGCAACATGTCCTGGAGACAGCAAAGTAAGCATGAAGGTCTCTTAGTGTaGCCCAGGCTGGCATCACAC | + |
Preference number: 2 (lower is better) Translates to: PADTVVRSNMSWRQQSKHEGLLV*PRLASH Trigger: GTGTGATGCCAGCCTGGGTCACACTAAGAGACCTTC...ATGCTTACTTTGCTGTCTCCAGGACATGTTGCTTCTCACGACTGTATCTGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR GCA 90 bp | CCTGGAGACAGCAAAGTAAGCATCCAAGGACAAGGTGACCCTTTTCCTGGTGCCTGGCATCACACTTTCTaGATAGCCTGGTTGACCTCA | + |
Preference number: 2 (lower is better) Translates to: PGDSKVSIQGQGDPFPGAWHHTF*IAWLTS Trigger: TGAGGTCAACCAGGCTATGCAGAAAGTGTGATGCCA...GGCACCAGGAAAAGGGTCACCTTGTCCTTGGATGCTTACTTTGCTGTCTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR TCA 90 bp | ATCAGTTCTGTGCTCAGGAATTCCCCTTTGTCTGGTTGCATGTCAGTGGTGATACAGTGGGAAACCTTGTaGGCACCGCACAGGATCAGT | + |
Preference number: 2 (lower is better) Translates to: ISSVLRNSPLSGCMSVVIQWETL*APHRIS Trigger: ACTGATCCTGTGCGGTGCTCACAAGGTTTCCCACTG...TATCACCACTGACATGCAACCAGACAAAGGGGAATTCCTGAGCACAGAACTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR CAA 90 bp | CTGCTACTCCTGTTTAACACGGGAGGAGGCCAGAGCTCAGACAAGTaGGGTAGTTTTCCCCCAACTCACACAGTAAGCTGGTATAATATG | + |
Preference number: 2 (lower is better) Translates to: LLLLFNTGGGQSSDK*GSFPPTHTVSWYNM Trigger: CATATTATACCAGCTTACTGTGTGAGTTGGGGGAAAACTACCCAACTTGTCTGAGCTCTGGCCTCCTCCCGTGTTAAACAGGAGTAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR-3UTR TCA 90 bp | AACCCTCTTCTTGGTTCTAGTATCTACTTTGTGGCTTCCAGACGGCCCCTCCTTCAGCTCCTGAAGCATTaGAGTGGGCTGTCTATCAAA | + |
Preference number: 2 (lower is better) Translates to: NPLLGSSIYFVASRRPLLQLLKH*SGLSIK Trigger: TTTGATAGACAGCCCACTTCAATGCTTCAGGAGCTG...AAGGAGGGGCCGTCTGGAAGCCACAAAGTAGATACTAGAACCAAGAAGAGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR-3UTR TCA 90 bp | ATCTCAAGTCAGTGTAAAATGAGTCAAGATGTCAGGACAGGCTACTTCTACAAAATCTGCTGCTCTGTGTaGGGCCCTCAGTGCCTGGCA | + |
Preference number: 2 (lower is better) Translates to: ISSQCKMSQDVRTGYFYKICCSV*GPQCLA Trigger: TGCCAGGCACTGAGGGCCTCACACAGAGCAGCAGAT...TTTGTAGAAGTAGCCTGTCCTGACATCTTGACTCATTTTACACTGACTTGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR CAA 90 bp | AAAGATGACGCCAATAAGAGGGTCTCCTCCGAACTTTACAGTACTTaGTCCCAAGTATGTAAATGTGGAAGAAAGGCTCAGAAGCTGCCT | + |
Preference number: 2 (lower is better) Translates to: KDDANKRVSSELYST*SQVCKCGRKAQKLP Trigger: AGGCAGCTTCTGAGCCTTTCTTCCACATTTACATACTTGGGACAAAGTACTGTAAAGTTCGGAGGAGACCCTCTTATTGGCGTCATCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR-3UTR TCA 90 bp | AGGAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGTGTACTGGAATTTCTTaGGGCCCTCAGTCAGGTAAA | + |
Preference number: 2 (lower is better) Translates to: RRKEEDRCHILCRINWCLCTGIS*GPQSGK Trigger: TTTACCTGACTGAGGGCCTCAAGAAATTCCAGTACA...CAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR-3UTR TCA 90 bp | TATAGCGTCAATAAACTCTTTCCTCTCAGCTTTGTGTCAGTAAAGTTCTTGGGCCATGAGTACTGCCTCTaGCACTCTCTAGACCCCATT | + |
Preference number: 2 (lower is better) Translates to: YSVNKLFPLSFVSVKFLGHEYCL*HSLDPI Trigger: AATGGGGTCTAGAGAGTGTCAGAGGCAGTACTCATG...GCCCAAGAACTTTACTGACACAAAGCTGAGAGGAAAGAGTTTATTGACGCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR CCA 90 bp | CTCAGAAGCTGCCTGTCTGTCACAGTGGGTTACAAAATAGTCAAAGGCACAAAGCTCTGCAGGATAAACTaGTGTTTGAATGCACAGCTA | + |
Preference number: 2 (lower is better) Translates to: LRSCLSVTVGYKIVKGTKLCRIN*CLNAQL Trigger: TAGCTGTGCATTCAAACACCAGTTTATCCTGCAGAG...CTTTGTGCCTTTGACTATTTTGTAACCCACTGTGACAGACAGGCAGCTTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR-3UTR CCA 90 bp | ATCAGTTCTGTGCTCAGGAATTCCCCTTTGTCTGGTTGCATGTCAGTGGTGATACTTCCATGTAACAAATaGAGACTTTGGAGACAGGAG | + |
Preference number: 2 (lower is better) Translates to: ISSVLRNSPLSGCMSVVILPCNK*RLWRQE Trigger: CTCCTGTCTCCAAAGTCTCCATTTGTTACATGGAAG...TATCACCACTGACATGCAACCAGACAAAGGGGAATTCCTGAGCACAGAACTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR TCA 90 bp | TATAGCGTCAATAAACTCTTTCCTCTCAGCTTTGTGTCAGTAAAGTTCTTGGGCCAGCTCCTGAAGCATTaGAGTGGGCTGTCTATCAAA | + |
Preference number: 2 (lower is better) Translates to: YSVNKLFPLSFVSVKFLGQLLKH*SGLSIK Trigger: TTTGATAGACAGCCCACTTCAATGCTTCAGGAGCTG...GCCCAAGAACTTTACTGACACAAAGCTGAGAGGAAAGAGTTTATTGACGCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR TCA 90 bp | TTCCGATGCTCACAACATGCAAACCCTTATCAAATTGTAAACTTCATATTTGTGCATCCAAGGACAAGGTaGCCCTTTTCCTGGTGCCAC | + |
Preference number: 2 (lower is better) Translates to: FRCSQHANPYQIVNFIFVHPRTR*PFSWCH Trigger: GTGGCACCAGGAAAAGGGTCACCTTGTCCTTGGATG...CACAAATATGAAGTTTACAATTTGATAAGGGTTTGCATGTTGTGAGCATCGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR CAA 90 bp | ACACAAGAAAGAGCAAAGCATCACTGTGGCCCTCCACACATTACTTaGACTCATGTACTATGGCAGAGTACATTTCCATGTTGTTGGATA | + |
Preference number: 2 (lower is better) Translates to: TQERAKHHCGPPHIT*THVLWQSTFPCCWI Trigger: TATCCAACAACATGGAAATGTACTCTGCCATAGTACATGAGTCAAAGTAATGTGTGGAGGGCCACAGTGATGCTTTGCTCTTTCTTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR TCA 90 bp | GAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGAACCTGGGAGGGAGCTTTaGTACTTTAGAAAAACATAC | + |
Preference number: 2 (lower is better) Translates to: EKGRRQVSHSLQDKLVFEPGREL*YFRKTY Trigger: GTATGTTTTTCTAAAGTATCAAAGCTCCCTCCCAGG...TTCAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR-3UTR TCA 90 bp | GGCCTTACTTGGGATGGAATATATAGCGTCAATAAACTCTTTCCTCTCAGCTTTGGCTTAAGTATCAGTTaGTTCCTGATCCGTGGTTCT | + |
Preference number: 2 (lower is better) Translates to: GLTWDGIYSVNKLFPLSFGLSIS*FLIRGS Trigger: AGAACCACGGATCAGGAATCAACTGATACTTAAGCC...AAAGCTGAGAGGAAAGAGTTTATTGACGCTATATATTCCATCCCAAGTAAGGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR CCA 90 bp | AGGAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGAAATGCTCATACAAGTaGTCTAACCCTCTTCTTGGT | + |
Preference number: 2 (lower is better) Translates to: RRKEEDRCHILCRINWCLKCSYK*SNPLLG Trigger: ACCAAGAAGAGGGTTAGACCACTTGTATGAGCATTT...CAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR-3UTR TCA 90 bp | GGCCTTACTTGGGATGGAATATATAGCGTCAATAAACTCTTTCCTCTCAGCTTTCCTGGGAGGGAGCTTTaGTACTTTAGAAAAACATAC | + |
Preference number: 2 (lower is better) Translates to: GLTWDGIYSVNKLFPLSFPGREL*YFRKTY Trigger: GTATGTTTTTCTAAAGTATCAAAGCTCCCTCCCAGG...AAAGCTGAGAGGAAAGAGTTTATTGACGCTATATATTCCATCCCAAGTAAGGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR TCA 90 bp | AAACAGAATGTGTTTCTAGCAAATTCTAACCTGTGGACTTACCACCATTCTTGTGAGACACAGAGAGACTaGGCACACAAGAAAGAGCAA | + |
Preference number: 2 (lower is better) Translates to: KQNVFLANSNLWTYHHSCETQRD*AHKKEQ Trigger: TTGCTCTTTCTTGTGTGCTCAGTCTCTCTGTGTCTC...ACAAGAATGGTGGTAAGTCCACAGGTTAGAATTTGCTAGAAACACATTCTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR TCA 90 bp | GTCAATAAACTCTTTCCTCTCAGCTTTGTGTCAGTAAAGTTCTTGGGCTTAAGTCTCCACACATTACTTTaGCTCATGTACTATGGCAGA | + |
Preference number: 2 (lower is better) Translates to: VNKLFPLSFVSVKFLGLSLHTLL*LMYYGR Trigger: TCTGCCATAGTACATGAGTCAAAGTAATGTGTGGAG...ACTTAAGCCCAAGAACTTTACTGACACAAAGCTGAGAGGAAAGAGTTTATTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR TCA 90 bp | ATCTCAAGTCAGTGTAAAATGAGTCAAGATGTCAGGACAGGCTACTTCTACAAACCTGATCCGTGGTTCTaGAGAAAACAGAATGTGTTT | + |
Preference number: 2 (lower is better) Translates to: ISSQCKMSQDVRTGYFYKPDPWF*RKQNVF Trigger: AAACACATTCTGTTTTCTTCAGAACCACGGATCAGG...TTTGTAGAAGTAGCCTGTCCTGACATCTTGACTCATTTTACACTGACTTGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR CCA 90 bp | ATCTCAAGTCAGTGTAAAATGAGTCAAGATGTCAGGACAGGCTACTTCTACAAAAAATGCTCATACAAGTaGTCTAACCCTCTTCTTGGT | + |
Preference number: 2 (lower is better) Translates to: ISSQCKMSQDVRTGYFYKKCSYK*SNPLLG Trigger: ACCAAGAAGAGGGTTAGACCACTTGTATGAGCATTT...TTTGTAGAAGTAGCCTGTCCTGACATCTTGACTCATTTTACACTGACTTGAGAT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR GCA 90 bp | TTCCGATGCTCACAACATGCAAACCCTTATCAAATTGTAAACTTCATATTTGTGAGGTGTCACATTCTCTaGAGGATAAACTGGTGTTTG | + |
Preference number: 2 (lower is better) Translates to: FRCSQHANPYQIVNFIFVRCHIL*RINWCL Trigger: CAAACACCAGTTTATCCTGCAGAGAATGTGACACCT...CACAAATATGAAGTTTACAATTTGATAAGGGTTTGCATGTTGTGAGCATCGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR-3UTR GCA 90 bp | ATCTCAAGTCAGTGTAAAATGAGTCAAGATGTCAGGACAGGCTACTTCTACAAATTATTGGCCAATGTATaGGTGTACTCATGTATGTAC | + |
Preference number: 2 (lower is better) Translates to: ISSQCKMSQDVRTGYFYKLLANV*VYSCMY Trigger: GTACATACATGAGTACACGCATACATTGGCCAATAA...TTTGTAGAAGTAGCCTGTCCTGACATCTTGACTCATTTTACACTGACTTGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
||
3UTR GCA 72 bp | GGCAACCAGCAGATACGGGAGGGGCATTGGTGGGTGTaGGCCAGGGCTTTGTGTACCTGTCATCCTCAGAGG | + |
Preference number: 3 (lower is better) Translates to: GNQQIREGHWWV*ARALCTCHPQR Trigger: CCTCTGAGGATGACAGGTACACAAAGCCCTGGCGCACACCCACCAATGCCCCTCCCGTATCTGCTGGTTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
||
3UTR TCA 72 bp | AACCTTGTGAGCACCGCACAGGATCAGTGGCCATCCTaGAGAGGCACGATGCAGCTCCCTGGGAGCGCATTC | + |
Preference number: 3 (lower is better) Translates to: NLVSTAQDQWPS*RGTMQLPGSAF Trigger: GAATGCGCTCCCAGGGAGCTGCATCGTGCCTCTTCAGGATGGCCACTGATCCTGTGCGGTGCTCACAAGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
||
3UTR CCA 72 bp | AAATATCAAGGCAACCAGCAGATACGGGAGGGGCATTaGTGGGTGTGCGCCAGGGCTTTGTGTACCTGTCAT | + |
Preference number: 3 (lower is better) Translates to: KYQGNQQIREGH*WVCARALCTCH Trigger: ATGACAGGTACACAAAGCCCTGGCGCACACCCACCAATGCCCCTCCCGTATCTGCTGGTTGCCTTGATATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
||
3UTR TCA 72 bp | TATTGCAGTACATTGCTGTGTATCTGCTGCTCTGTGTaGGGCCCTCAGTGCCTGGCACATGGCCTTACTTGG | + |
Preference number: 3 (lower is better) Translates to: YCSTLLCICCSV*GPQCLAHGLTW Trigger: CCAAGTAAGGCCATGTGCCAGGCACTGAGGGCCTCACACAGAGCAGCAGATACACAGCAATGTACTGCAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
||
3UTR CCA 72 bp | TGTGTATCTGCTGCTCTGTGTGAGGCCCTCAGTGCCTaGCACATGGCCTTACTTGGGATGGAATATATAGCG | + |
Preference number: 3 (lower is better) Translates to: CVSAALCEALSA*HMALLGMEYIA Trigger: CGCTATATATTCCATCCCAAGTAAGGCCATGTGCCAGGCACTGAGGGCCTCACACAGAGCAGCAGATACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
||
3UTR-3UTR CAA 90 bp | AGACAGGAGGTCACTGACTCCCCTGACCACACACAGCCAGTGAGCAGCAGAGCCAGGATAAACTGGTGTTaGAATGCACAGCTAAGAAAG | + |
Preference number: 3 (lower is better) Translates to: RQEVTDSPDHTQPVSSRARINWC*NAQLRK Trigger: CTTTCTTAGCTGTGCATTCAAACACCAGTTTATCCT...GGCTCTGCTGCTCACTGGCTGTGTGTGGTCAGGGGAGTCAGTGACCTCCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
||
3UTR TCA 72 bp | GTGATAATCAAACTTGAGTCACAGTGGGAAACCTTGTaGGCACCGCACAGGATCAGTGGCCATCCTGAAGAG | + |
Preference number: 3 (lower is better) Translates to: VIIKLESQWETL*APHRISGHPEE Trigger: CTCTTCAGGATGGCCACTGATCCTGTGCGGTGCTCACAAGGTTTCCCACTGTGACTCAAGTTTGATTATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
||
3UTR CCA 72 bp | GGCTTTGTGTACCTGTCATCCTCAGAGGAGACTGGCTaGTTCTCACTGAGCCTTTCCTTTATTGGCCAATGT | + |
Preference number: 3 (lower is better) Translates to: GFVYLSSSEETG*FSLSLSFIGQC Trigger: ACATTGGCCAATAAAGGAAAGGCTCAGTGAGAACCAGCCAGTCTCCTCTGAGGATGACAGGTACACAAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
||
3UTR-3UTR CAA 90 bp | TATAGCGTCAATAAACTCTTTCCTCTCAGCTTTGTGTCAGTAAAGTTCTTGGGCTTCACTGCACGGCAGTaGGCAGCATCCTGCTGTGTT | + |
Preference number: 3 (lower is better) Translates to: YSVNKLFPLSFVSVKFLGFTARQ*AASCCV Trigger: AACACAGCAGGATGCTGCCAACTGCCGTGCAGTGAA...GCCCAAGAACTTTACTGACACAAAGCTGAGAGGAAAGAGTTTATTGACGCTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
||
3UTR TCA 72 bp | TTTGTCTGGTTGCATGTCAGTGGTGATAATCAAACTTaGGTCACAGTGGGAAACCTTGTGAGCACCGCACAG | + |
Preference number: 3 (lower is better) Translates to: FVWLHVSGDNQT*VTVGNLVSTAQ Trigger: CTGTGCGGTGCTCACAAGGTTTCCCACTGTGACTCAAGTTTGATTATCACCACTGACATGCAACCAGACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
||
3UTR GCA 72 bp | CTGGTGATTATAACCAGCTTGTGTATTGCAGTACATTaGTGTGTATCTGCTGCTCTGTGTGAGGCCCTCAGT | + |
Preference number: 3 (lower is better) Translates to: LVIITSLCIAVH*CVSAALCEALS Trigger: ACTGAGGGCCTCACACAGAGCAGCAGATACACAGCAATGTACTGCAATACACAAGCTGGTTATAATCACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR CCA 72 bp | AGTCACAGAGCTTACCATCATCTTCCATGTAACAAATaGAGACTTTGGAGACAGGAGGTCACTGACTCCCCT | + |
Preference number: 3 (lower is better) Translates to: SHRAYHHLPCNK*RLWRQEVTDSP Trigger: AGGGGAGTCAGTGACCTCCTGTCTCCAAAGTCTCCATTTGTTACATGGAAGATGATGGTAAGCTCTGTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
||
3UTR TCA 72 bp | TTTGTTTTTCTGGTTTTGATAGAAGGTCTCTTAGTGTaGCCCAGGCTGGCATCACACTTTCTGCATAGCCTG | + |
Preference number: 3 (lower is better) Translates to: FVFLVLIEGLLV*PRLASHFLHSL Trigger: CAGGCTATGCAGAAAGTGTGATGCCAGCCTGGGTCACACTAAGAGACCTTCTATCAAAACCAGAAAAACAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
||
3UTR TCA 72 bp | GAGCAAAGCATCACTGTGGCCCTCCACACATTACTTTaGCTCATGTACTATGGCAGAGTACATTTCCATGTT | + |
Preference number: 3 (lower is better) Translates to: EQSITVALHTLL*LMYYGRVHFHV Trigger: AACATGGAAATGTACTCTGCCATAGTACATGAGTCAAAGTAATGTGTGGAGGGCCACAGTGATGCTTTGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
||
3UTR GCA 72 bp | CACAAGAAATTAATGGATTGCTGCACATCAGTTCTGTaGTCAGGAATTCCCCTTTGTCTGGTTGCATGTCAG | + |
Preference number: 3 (lower is better) Translates to: HKKLMDCCTSVL*SGIPLCLVACQ Trigger: CTGACATGCAACCAGACAAAGGGGAATTCCTGAGCACAGAACTGATGTGCAGCAATCCATTAATTTCTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR CCA 72 bp | GAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTaGTGTTTGAATGCACAGCTAAGAAAGGGTTGTCAG | + |
Preference number: 3 (lower is better) Translates to: EEDRCHILCRIN*CLNAQLRKGCQ Trigger: CTGACAACCCTTTCTTAGCTGTGCATTCAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR CCA 72 bp | GGAGACTGGCTGGTTCTCACTGAGCCTTTCCTTTATTaGCCAATGTATGCGTGTACTCATGTATGTACTTAT | + |
Preference number: 3 (lower is better) Translates to: GDWLVLTEPFLY*PMYACTHVCTY Trigger: ATAAGTACATACATGAGTACACGCATACATTGGCCAATAAAGGAAAGGCTCAGTGAGAACCAGCCAGTCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR GCA 72 bp | GACTATCTCCCTAGTCATCACAAGAAATTAATGGATTaGTGCACATCAGTTCTGTGCTCAGGAATTCCCCTT | + |
Preference number: 3 (lower is better) Translates to: DYLPSHHKKLMD*CTSVLCSGIPL Trigger: AAGGGGAATTCCTGAGCACAGAACTGATGTGCAGCAATCCATTAATTTCTTGTGATGACTAGGGAGATAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR GCA 72 bp | GTGTCACATTCTCTGCAGGATAAACTGGTGTTTGAATaGACAGCTAAGAAAGGGTTGTCAGTGTTCAGTATA | + |
Preference number: 3 (lower is better) Translates to: VSHSLQDKLVFE*TAKKGLSVFSI Trigger: TATACTGAACACTGACAACCCTTTCTTAGCTGTGCATTCAAACACCAGTTTATCCTGCAGAGAATGTGACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR GCA 72 bp | TATCTCCCTAGTCATCACAAGAAATTAATGGATTGCTaGACATCAGTTCTGTGCTCAGGAATTCCCCTTTGT | + |
Preference number: 3 (lower is better) Translates to: YLPSHHKKLMDC*TSVLCSGIPLC Trigger: ACAAAGGGGAATTCCTGAGCACAGAACTGATGTGCAGCAATCCATTAATTTCTTGTGATGACTAGGGAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
||
3UTR TCA 72 bp | GCACTGTGTAAGAAGAATGGGCAGGGAAGAGTAATCTaGGCCTTGATTATTGAGAAGTATAGGAAGTTCATT | + |
Preference number: 3 (lower is better) Translates to: ALCKKNGQGRVI*ALIIEKYRKFI Trigger: AATGAACTTCCTATACTTCTCAATAATCAAGGCTCAGATTACTCTTCCCTGCCCATTCTTCTTACACAGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR TCA 72 bp | GGGCTTAAGTATCAGTTGATTCCTGATCCGTGGTTCTaGAGAAAACAGAATGTGTTTCTAGCAAATTCTAAC | + |
Preference number: 3 (lower is better) Translates to: GLKYQLIPDPWF*RKQNVFLANSN Trigger: GTTAGAATTTGCTAGAAACACATTCTGTTTTCTTCAGAACCACGGATCAGGAATCAACTGATACTTAAGCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR TCA 72 bp | TACTCATGTATGTACTTATGTATGTATGTAACCTGTTaGGTTCAATTAGTGCTTCCGATGCTCACAACATGC | + |
Preference number: 3 (lower is better) Translates to: YSCMYLCMYVTC*VQLVLPMLTTC Trigger: GCATGTTGTGAGCATCGGAAGCACTAATTGAACTCAACAGGTTACATACATACATAAGTACATACATGAGTA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR TCA 90 bp | CGCGGAAGGCACTGCTACTCCTGTTTAACACGGGAGGAGGCCAGAGCTCAGACACGGATGTCAGGGTGCTaGGAGAGCCTCTGTCCTGCG | + |
Preference number: 4 (lower is better) Translates to: RGRHCYSCLTREEARAQTRMSGC*ESLCPA Trigger: CGCAGGACAGAGGCTCTCTCAGCACCCTGACATCCG...TGTCTGAGCTCTGGCCTCCTCCCGTGTTAAACAGGAGTAGCAGTGCCTTCCGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | TACTTTGTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGTGTTGCCCCCTCTTCTaGCTGGGGAGTGCGAGGCGC | + |
Preference number: 4 (lower is better) Translates to: YFVASRRPLLPHLRQGLQCCPLF*LGSARR Trigger: GCGCCTCGCACTCCCCAGCCAGAAGAGGGGGCAACA...CTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCACAAAGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | GTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGGATCTGTTTGCCCACTaGGGTGGATCCAGTGAAGCC | + |
Preference number: 4 (lower is better) Translates to: VASRRPLLPHLRQGLQLLDLFAH*GGSSEA Trigger: GGCTTCACTGGATCCACCTCAGTGGGCAAACAGATC...CAGGAGCTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | CGCGGAAGGCACTGCTACTCCTGTTTAACACGGGAGGAGGCCAGAGCTCAGACAAGTGTGGCCCCCTCCTaGACCCCAGTCTCACAGTAC | + |
Preference number: 4 (lower is better) Translates to: RGRHCYSCLTREEARAQTSVAPS*TPVSQY Trigger: GTACTGTGAGACTGGGGTGCAGGAGGGGGCCACACT...TGTCTGAGCTCTGGCCTCCTCCCGTGTTAAACAGGAGTAGCAGTGCCTTCCGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | GTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGGGCACAGGCACCAAGTaGCTCCTTCTTGGTGAAGGT | + |
Preference number: 4 (lower is better) Translates to: VASRRPLLPHLRQGLQLLGTGTK*LLLGEG Trigger: ACCTTCACCAAGAAGGAGCCACTTGGTGCCTGTGCC...CAGGAGCTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR CAA 72 bp | ATACGGGAGGGGCATTGGTGGGTGTGCGCCAGGGCTTaGTGTACCTGTCATCCTCAGAGGAGACTGGCTGGT | + |
Preference number: 4 (lower is better) Translates to: IREGHWWVCARA*CTCHPQRRLAG Trigger: ACCAGCCAGTCTCCTCTGAGGATGACAGGTACACAAAGCCCTGGCGCACACCCACCAATGCCCCTCCCGTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR TCA 90 bp | GTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGCCAGGGACCTTGTCATaGCCTCGAATCCAGTTATGC | + |
Preference number: 4 (lower is better) Translates to: VASRRPLLPHLRQGLQLLPGTLS*PRIQLC Trigger: GCATAACTGGATTCGAGGTCATGACAAGGTCCCTGG...CAGGAGCTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | CATAGCCTGGTTGACCTCAGGTCAGCAATAAGGACCCTGCCCTGCCCTGGCCTGCTCCGCAACTCTGTCTaGTCTCTTCCACCAGCCTCA | + |
Preference number: 4 (lower is better) Translates to: HSLVDLRSAIRTLPCPGLLRNSV*SLPPAS Trigger: TGAGGCTGGTGGAAGAGATCAGACAGAGTTGCGGAG...CAGGCCAGGGCAGGGCAGGGTCCTTATTGCTGACCTGAGGTCAACCAGGCTATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | GTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGTCCTGCGACACCCCCTaGGCCTGGAATGATGTTAAT | + |
Preference number: 4 (lower is better) Translates to: VASRRPLLPHLRQGLQLLSCDTP*AWNDVN Trigger: ATTAACATCATTCCAGGCTCAGGGGGTGTCGCAGGA...CAGGAGCTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | CATAGCCTGGTTGACCTCAGGTCAGCAATAAGGACCCTGCCCTGCCCTGGCCTGACACAGTGGGTTCCATaGAGAAGCCTGGCCTCTGCA | + |
Preference number: 4 (lower is better) Translates to: HSLVDLRSAIRTLPCPGLTQWVP*RSLASA Trigger: TGCAGAGGCCAGGCTTCTTCATGGAACCCACTGTGT...CAGGCCAGGGCAGGGCAGGGTCCTTATTGCTGACCTGAGGTCAACCAGGCTATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | CATAGCCTGGTTGACCTCAGGTCAGCAATAAGGACCCTGCCCTGCCCTGGCCTGGATGCCTTCATATGTTaGCCCCTCTTCTGGCTGGGG | + |
Preference number: 4 (lower is better) Translates to: HSLVDLRSAIRTLPCPGLDAFIC*PLFWLG Trigger: CCCCAGCCAGAAGAGGGGGCAACATATGAAGGCATC...CAGGCCAGGGCAGGGCAGGGTCCTTATTGCTGACCTGAGGTCAACCAGGCTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | CCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGAAGCATTGAAGTGGGCTGTCCTCCATACACCAGTGTaGCCCCCTCCTGCACCCCAG | + |
Preference number: 4 (lower is better) Translates to: PSSSPSGSSAPEALKWAVLHTPV*PPPAPQ Trigger: CTGGGGTGCAGGAGGGGGCCACACTGGTGTATGGAG...GACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCTGACGGAGATGAGGAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | TACTTTGTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGGTGAGGGGTGGTAGATaGTGGAGCCATGCTTTGGGC | + |
Preference number: 4 (lower is better) Translates to: YFVASRRPLLPHLRQGLQVRGGR*WSHALG Trigger: GCCCAAAGCATGGCTCCATCATCTACCACCCCTCAC...CTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCACAAAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | AGACAGGAGGTCACTGACTCCCCTGACCACACACAGCCAGTGAGCAGCAGAGCCCCAGGGACCTTGTCATaGCCTCGAATCCAGTTATGC | + |
Preference number: 4 (lower is better) Translates to: RQEVTDSPDHTQPVSSRAPGTLS*PRIQLC Trigger: GCATAACTGGATTCGAGGTCATGACAAGGTCCCTGG...GGCTCTGCTGCTCACTGGCTGTGTGTGGTCAGGGGAGTCAGTGACCTCCTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR TCA 90 bp | GTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGGTGGCTCCTTCTTGGTaGAGGTCAGGTTGTAATTCG | + |
Preference number: 4 (lower is better) Translates to: VASRRPLLPHLRQGLQLLVAPSW*RSGCNS Trigger: CGAATTACAACCTGACCTTCACCAAGAAGGAGCCAC...CAGGAGCTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | CGCGGAAGGCACTGCTACTCCTGTTTAACACGGGAGGAGGCCAGAGCTCAGACAACACAGTGGGTTCCATaGAGAAGCCTGGCCTCTGCA | + |
Preference number: 4 (lower is better) Translates to: RGRHCYSCLTREEARAQTTQWVP*RSLASA Trigger: TGCAGAGGCCAGGCTTCTTCATGGAACCCACTGTGT...TGTCTGAGCTCTGGCCTCCTCCCGTGTTAAACAGGAGTAGCAGTGCCTTCCGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | CATAGCCTGGTTGACCTCAGGTCAGCAATAAGGACCCTGCCCTGCCCTGGCCTGATCCACCACCATCTCTaGCTCTTCGTCCTCTCCTCT | + |
Preference number: 4 (lower is better) Translates to: HSLVDLRSAIRTLPCPGLIHHHL*LFVLSS Trigger: AGAGGAGAGGACGAAGAGGCAGAGATGGTGGTGGAT...CAGGCCAGGGCAGGGCAGGGTCCTTATTGCTGACCTGAGGTCAACCAGGCTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | CATAGCCTGGTTGACCTCAGGTCAGCAATAAGGACCCTGCCCTGCCCTGGCCTGCTTCTACCATGGCCTTaGTCCCCTCAGGAAAAAGGA | + |
Preference number: 4 (lower is better) Translates to: HSLVDLRSAIRTLPCPGLLLPWP*SPQEKG Trigger: TCCTTTTTCCTGAGGGGATCAAGGCCATGGTAGAAG...CAGGCCAGGGCAGGGCAGGGTCCTTATTGCTGACCTGAGGTCAACCAGGCTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | TACTTTGTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGTCACCATCTGTCCATTaGTCTCTGCCCAGGCTCCAG | + |
Preference number: 4 (lower is better) Translates to: YFVASRRPLLPHLRQGLQSPSVH*SLPRLQ Trigger: CTGGAGCCTGGGCAGAGATCAATGGACAGATGGTGA...CTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCACAAAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | CATAGCCTGGTTGACCTCAGGTCAGCAATAAGGACCCTGCCCTGCCCTGGCCTGACAGACATTCCAATGTaGGTCTTCAGAGCCAGGGTG | + |
Preference number: 4 (lower is better) Translates to: HSLVDLRSAIRTLPCPGLTDIPM*VFRARV Trigger: CACCCTGGCTCTGAAGACTCACATTGGAATGTCTGT...CAGGCCAGGGCAGGGCAGGGTCCTTATTGCTGACCTGAGGTCAACCAGGCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
||
CDS-3UTR TCA 90 bp | CGCGGAAGGCACTGCTACTCCTGTTTAACACGGGAGGAGGCCAGAGCTCAGACATCCTGCGACACCCCCTaGGCCTGGAATGATGTTAAT | + |
Preference number: 4 (lower is better) Translates to: RGRHCYSCLTREEARAQTSCDTP*AWNDVN Trigger: ATTAACATCATTCCAGGCTCAGGGGGTGTCGCAGGA...TGTCTGAGCTCTGGCCTCCTCCCGTGTTAAACAGGAGTAGCAGTGCCTTCCGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
||
CDS-3UTR TCA 90 bp | AGACAGGAGGTCACTGACTCCCCTGACCACACACAGCCAGTGAGCAGCAGAGCCTTGGCAAGGTACATGTaGTCTTCCACGCCTGTGAAC | + |
Preference number: 4 (lower is better) Translates to: RQEVTDSPDHTQPVSSRALARYM*SSTPVN Trigger: GTTCACAGGCGTGGAAGATCACATGTACCTTGCCAA...GGCTCTGCTGCTCACTGGCTGTGTGTGGTCAGGGGAGTCAGTGACCTCCTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR GCA 90 bp | CATAGCCTGGTTGACCTCAGGTCAGCAATAAGGACCCTGCCCTGCCCTGGCCTGCCTCGAATCCAGTTATaGAAACCTTCAGCAGGCTGG | + |
Preference number: 4 (lower is better) Translates to: HSLVDLRSAIRTLPCPGLPRIQL*KPSAGW Trigger: CCAGCCTGCTGAAGGTTTGCATAACTGGATTCGAGG...CAGGCCAGGGCAGGGCAGGGTCCTTATTGCTGACCTGAGGTCAACCAGGCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | GTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGTTTCACGGTCAGCTCTaGAAACTTCAGAGCCGTCAA | + |
Preference number: 4 (lower is better) Translates to: VASRRPLLPHLRQGLQLLFHGQL*KLQSRQ Trigger: TTGACGGCTCTGAAGTTTGCAGAGCTGACCGTGAAA...CAGGAGCTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
||
CDS-3UTR GCA 90 bp | CATAGCCTGGTTGACCTCAGGTCAGCAATAAGGACCCTGCCCTGCCCTGGCCTGCCAGTCTCACAGTACTaGAGCAGCTTTTCCAAGTGC | + |
Preference number: 4 (lower is better) Translates to: HSLVDLRSAIRTLPCPGLPVSQY*SSFSKC Trigger: GCACTTGGAAAAGCTGCTGCAGTACTGTGAGACTGG...CAGGCCAGGGCAGGGCAGGGTCCTTATTGCTGACCTGAGGTCAACCAGGCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | GTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGGCGTTCTCCTTCTTCTaGATGCCTTCATATGTTGCC | + |
Preference number: 4 (lower is better) Translates to: VASRRPLLPHLRQGLQLLAFSFF*MPSYVA Trigger: GGCAACATATGAAGGCATCCAGAAGAAGGAGAACGC...CAGGAGCTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | GTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGTCTCTTCCACCACTCTaGTTACGAATTCGTCGTGGA | + |
Preference number: 4 (lower is better) Translates to: VASRRPLLPHLRQGLQLLSLPPL*LRIRRG Trigger: TCCACGACGAATTCGTAACCAGAGTGGTGGAAGAGA...CAGGAGCTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | AGACAGGAGGTCACTGACTCCCCTGACCACACACAGCCAGTGAGCAGCAGAGCCCTTCATTCCACCAAATaGGGCTGCCACGTCTGTCTT | + |
Preference number: 4 (lower is better) Translates to: RQEVTDSPDHTQPVSSRALHSTK*GCHVCL Trigger: AAGACAGACGTGGCAGCCCCATTTGGTGGAATGAAG...GGCTCTGCTGCTCACTGGCTGTGTGTGGTCAGGGGAGTCAGTGACCTCCTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR TCA 90 bp | GTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGGCACAACCTTTTGGATaGAATCTCCAAACTTGGTGG | + |
Preference number: 4 (lower is better) Translates to: VASRRPLLPHLRQGLQLLAQPFG*NLQTWW Trigger: CCACCAAGTTTGGAGATTTCATCCAAAAGGTTGTGC...CAGGAGCTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | CCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGAAGCATTGAAGTGGGCTGTCGACCTTAATGGTCTCTaGCACCTTCAGCTCCTCGGC | + |
Preference number: 4 (lower is better) Translates to: PSSSPSGSSAPEALKWAVDLNGL*HLQLLG Trigger: GCCGAGGAGCTGAAGGTGGCAGAGACCATTAAGGTC...GACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCTGACGGAGATGAGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | AGACAGGAGGTCACTGACTCCCCTGACCACACACAGCCAGTGAGCAGCAGAGCCTTTGTCACACCAGCCTaGGAAGTATCTGAACGTCTG | + |
Preference number: 4 (lower is better) Translates to: RQEVTDSPDHTQPVSSRAFVTPA*EVSERL Trigger: CAGACGTTCAGATACTTCGCAGGCTGGTGTGACAAA...GGCTCTGCTGCTCACTGGCTGTGTGTGGTCAGGGGAGTCAGTGACCTCCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR GCA 90 bp | GTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGTTATCAGTGGGGATTTaGCACCAAGCTCAAGGGAAA | + |
Preference number: 4 (lower is better) Translates to: VASRRPLLPHLRQGLQLLLSVGI*HQAQGK Trigger: TTTCCCTTGAGCTTGGTGGCAAATCCCCACTGATAA...CAGGAGCTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | CCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGAAGCATTGAAGTGGGCTGTCAATAAACCCGGCTGGTaGAGAAGTGCCGTAGCGCCT | + |
Preference number: 4 (lower is better) Translates to: PSSSPSGSSAPEALKWAVNKPGW*RSAVAP Trigger: AGGCGCTACGGCACTTCTCCACCAGCCGGGTTTATT...GACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCTGACGGAGATGAGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR CCA 90 bp | TACTTTGTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGCCATCAGCTATGAGTTaGACGGCTTCTACCATGGCC | + |
Preference number: 4 (lower is better) Translates to: YFVASRRPLLPHLRQGLQPSAMS*TASTMA Trigger: GGCCATGGTAGAAGCCGTCCAACTCATAGCTGATGG...CTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCACAAAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | CATAGCCTGGTTGACCTCAGGTCAGCAATAAGGACCCTGCCCTGCCCTGGCCTGGCGTTCTCCTTCTTCTaGATGCCTTCATATGTTGCC | + |
Preference number: 4 (lower is better) Translates to: HSLVDLRSAIRTLPCPGLAFSFF*MPSYVA Trigger: GGCAACATATGAAGGCATCCAGAAGAAGGAGAACGC...CAGGCCAGGGCAGGGCAGGGTCCTTATTGCTGACCTGAGGTCAACCAGGCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | CATAGCCTGGTTGACCTCAGGTCAGCAATAAGGACCCTGCCCTGCCCTGGCCTGCCGGGCCTGGTTGATTaGAATTGTAGAACCCTGAAT | + |
Preference number: 4 (lower is better) Translates to: HSLVDLRSAIRTLPCPGLPGLVD*NCRTLN Trigger: ATTCAGGGTTCTACAATTCCAATCAACCAGGCCCGG...CAGGCCAGGGCAGGGCAGGGTCCTTATTGCTGACCTGAGGTCAACCAGGCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | CCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGAAGCATTGAAGTGGGCTGTCGGCACAGGCACCAAGTaGCTCCTTCTTGGTGAAGGT | + |
Preference number: 4 (lower is better) Translates to: PSSSPSGSSAPEALKWAVGTGTK*LLLGEG Trigger: ACCTTCACCAAGAAGGAGCCACTTGGTGCCTGTGCC...GACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCTGACGGAGATGAGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | TACTTTGTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGCGAATTCGTCGTGGATaGCCTCTTCCACAAACAGCC | + |
Preference number: 4 (lower is better) Translates to: YFVASRRPLLPHLRQGLQRIRRG*PLPQTA Trigger: GGCTGTTTGTGGAAGAGGCCATCCACGACGAATTCG...CTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCACAAAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | TACTTTGTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGAGTCCCATCTTTCTCTaGAGCCAAAGCCAGTGGATC | + |
Preference number: 4 (lower is better) Translates to: YFVASRRPLLPHLRQGLQSPIFL*SQSQWI Trigger: GATCCACTGGCTTTGGCTGCAGAGAAAGATGGGACT...CTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCACAAAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR GCA 90 bp | CCTGGAGACAGCAAAGTAAGCATCCAAGGACAAGGTGACCCTTTTCCTGGTGCCCTGTCCATTGATCTCTaGCCAGGCTCCAGGGACCTT | + |
Preference number: 4 (lower is better) Translates to: PGDSKVSIQGQGDPFPGALSIDL*PGSRDL Trigger: AAGGTCCCTGGAGCCTGGGCAGAGATCAATGGACAG...GGCACCAGGAAAAGGGTCACCTTGTCCTTGGATGCTTACTTTGCTGTCTCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR GCA 90 bp | CATAGCCTGGTTGACCTCAGGTCAGCAATAAGGACCCTGCCCTGCCCTGGCCTGCAATCACAGGGGTGTTaGTTAAAATTCGAGCCCAGA | + |
Preference number: 4 (lower is better) Translates to: HSLVDLRSAIRTLPCPGLQSQGC*LKFEPR Trigger: TCTGGGCTCGAATTTTAAGCAACACCCCTGTGATTG...CAGGCCAGGGCAGGGCAGGGTCCTTATTGCTGACCTGAGGTCAACCAGGCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | TACTTTGTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGAAACAGCCGCCCAGCTaGAATGCAGTTCTCTCCTTT | + |
Preference number: 4 (lower is better) Translates to: YFVASRRPLLPHLRQGLQKQPPS*NAVLSF Trigger: AAAGGAGAGAACTGCATTGCAGCTGGGCGGCTGTTT...CTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCACAAAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | CCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGAAGCATTGAAGTGGGCTGTCAAGAAGCCTGGCCTCTaGACCTGTCTTCCTCCATAC | + |
Preference number: 4 (lower is better) Translates to: PSSSPSGSSAPEALKWAVKKPGL*TCLPPY Trigger: GTATGGAGGAAGACAGGTGCAGAGGCCAGGCTTCTT...GACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCTGACGGAGATGAGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | CTCAGAAGCTGCCTGTCTGTCACAGTGGGTTACAAAATAGTCAAAGGCACAAAGTGTTGCCCCCTCTTCTaGCTGGGGAGTGCGAGGCGC | + |
Preference number: 4 (lower is better) Translates to: LRSCLSVTVGYKIVKGTKCCPLF*LGSARR Trigger: GCGCCTCGCACTCCCCAGCCAGAAGAGGGGGCAACA...CTTTGTGCCTTTGACTATTTTGTAACCCACTGTGACAGACAGGCAGCTTCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | CGCGGAAGGCACTGCTACTCCTGTTTAACACGGGAGGAGGCCAGAGCTCAGACACCCGCAGAAAAGTACTaGGAGGCTGGAATCATCTTT | + |
Preference number: 4 (lower is better) Translates to: RGRHCYSCLTREEARAQTPAEKY*EAGIIF Trigger: AAAGATGATTCCAGCCTCCCAGTACTTTTCTGCGGG...TGTCTGAGCTCTGGCCTCCTCCCGTGTTAAACAGGAGTAGCAGTGCCTTCCGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | CGCGGAAGGCACTGCTACTCCTGTTTAACACGGGAGGAGGCCAGAGCTCAGACACCGGGCCTGGTTGATTaGAATTGTAGAACCCTGAAT | + |
Preference number: 4 (lower is better) Translates to: RGRHCYSCLTREEARAQTPGLVD*NCRTLN Trigger: ATTCAGGGTTCTACAATTCCAATCAACCAGGCCCGG...TGTCTGAGCTCTGGCCTCCTCCCGTGTTAAACAGGAGTAGCAGTGCCTTCCGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | CCAGCAGATACAGTCGTGAGAAGCAACATGTCCTGGAGACAGCAAAGTAAGCATCTCCATACACCAGTGTaGCCCCCTCCTGCACCCCAG | + |
Preference number: 4 (lower is better) Translates to: PADTVVRSNMSWRQQSKHLHTPV*PPPAPQ Trigger: CTGGGGTGCAGGAGGGGGCCACACTGGTGTATGGAG...ATGCTTACTTTGCTGTCTCCAGGACATGTTGCTTCTCACGACTGTATCTGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR TCA 90 bp | TACTTTGTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGCTTTTCCATCAGCTATaGGTTGGACGGCTTCTACCA | + |
Preference number: 4 (lower is better) Translates to: YFVASRRPLLPHLRQGLQLFHQL*VGRLLP Trigger: TGGTAGAAGCCGTCCAACTCATAGCTGATGGAAAAG...CTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCACAAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | CCTGGAGACAGCAAAGTAAGCATCCAAGGACAAGGTGACCCTTTTCCTGGTGCCTTCCATCTGTGGGGTTaGCAGTGGCGTAAGTCTCTC | + |
Preference number: 4 (lower is better) Translates to: PGDSKVSIQGQGDPFPGAFHLWG*QWRKSL Trigger: GAGAGACTTACGCCACTGTCAACCCCACAGATGGAA...GGCACCAGGAAAAGGGTCACCTTGTCCTTGGATGCTTACTTTGCTGTCTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR TCA 90 bp | CCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGAAGCATTGAAGTGGGCTGTCACAGACATTCCAATGTaGGTCTTCAGAGCCAGGGTG | + |
Preference number: 4 (lower is better) Translates to: PSSSPSGSSAPEALKWAVTDIPM*VFRARV Trigger: CACCCTGGCTCTGAAGACTCACATTGGAATGTCTGT...GACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCTGACGGAGATGAGGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | CTCAGAAGCTGCCTGTCTGTCACAGTGGGTTACAAAATAGTCAAAGGCACAAAGCGGATGTCAGGGTGCTaGGAGAGCCTCTGTCCTGCG | + |
Preference number: 4 (lower is better) Translates to: LRSCLSVTVGYKIVKGTKRMSGC*ESLCPA Trigger: CGCAGGACAGAGGCTCTCTCAGCACCCTGACATCCG...CTTTGTGCCTTTGACTATTTTGTAACCCACTGTGACAGACAGGCAGCTTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | TACTTTGTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGTTTGTCACACCAGCCTaGGAAGTATCTGAACGTCTG | + |
Preference number: 4 (lower is better) Translates to: YFVASRRPLLPHLRQGLQFVTPA*EVSERL Trigger: CAGACGTTCAGATACTTCGCAGGCTGGTGTGACAAA...CTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCACAAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | TACTTTGTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGGTGTTATTTGCTCTCTaGAACACCCCATCGATGTCC | + |
Preference number: 4 (lower is better) Translates to: YFVASRRPLLPHLRQGLQVLFAL*NTPSMS Trigger: GGACATCGATGGGGTGTTGCAGAGAGCAAATAACAC...CTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCACAAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | GTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGATATTCAGTGTTATTTaGTCTCTGCAACACCCCATC | + |
Preference number: 4 (lower is better) Translates to: VASRRPLLPHLRQGLQLLIFSVI*SLQHPI Trigger: GATGGGGTGTTGCAGAGAGCAAATAACACTGAATAT...CAGGAGCTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | GCTTGTGTATTGCAGTACATTGCTGTGTATCTGCTGCTCTGTGTGAGGCCCTCAACTCCCACTACTCGGTaGCCCTCTTTCAGGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: ACVLQYIAVYLLLCVRPSTPTTR*PSFRSW Trigger: CCAGCTCCTGAAAGAGGGCCACCGAGTAGTGGGAGT...TGAGGGCCTCACACAGAGCAGCAGATACACAGCAATGTACTGCAATACACAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR CCA 90 bp | CCTGGAGACAGCAAAGTAAGCATCCAAGGACAAGGTGACCCTTTTCCTGGTGCCCCATCAGCTATGAGTTaGACGGCTTCTACCATGGCC | + |
Preference number: 4 (lower is better) Translates to: PGDSKVSIQGQGDPFPGAPSAMS*TASTMA Trigger: GGCCATGGTAGAAGCCGTCCAACTCATAGCTGATGG...GGCACCAGGAAAAGGGTCACCTTGTCCTTGGATGCTTACTTTGCTGTCTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR CAA 72 bp | CTGTTTAACACGGGAGGAGGCCAGAGCTCAGACAAGTaGGGTAGTTTTCCCCCAACTCACACAGTAAGCTGG | + |
Preference number: 4 (lower is better) Translates to: LFNTGGGQSSDK*GSFPPTHTVSW Trigger: CCAGCTTACTGTGTGAGTTGGGGGAAAACTACCCAACTTGTCTGAGCTCTGGCCTCCTCCCGTGTTAAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR CAA 72 bp | ACCACTGTGCCTAGCCCGTTTTTCACTGCACGGCAGTaGGCAGCATCCTGCTGTGTTATGCACTGTGTAAGA | + |
Preference number: 4 (lower is better) Translates to: TTVPSPFFTARQ*AASCCVMHCVR Trigger: TCTTACACAGTGCATAACACAGCAGGATGCTGCCAACTGCCGTGCAGTGAAAAACGGGCTAGGCACAGTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | CCAGCAGATACAGTCGTGAGAAGCAACATGTCCTGGAGACAGCAAAGTAAGCATGTGAGGGGTGGTAGATaGTGGAGCCATGCTTTGGGC | + |
Preference number: 4 (lower is better) Translates to: PADTVVRSNMSWRQQSKHVRGGR*WSHALG Trigger: GCCCAAAGCATGGCTCCATCATCTACCACCCCTCAC...ATGCTTACTTTGCTGTCTCCAGGACATGTTGCTTCTCACGACTGTATCTGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR TCA 90 bp | CCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGAAGCATTGAAGTGGGCTGTCCTTTTCCATCAGCTATaGGTTGGACGGCTTCTACCA | + |
Preference number: 4 (lower is better) Translates to: PSSSPSGSSAPEALKWAVLFHQL*VGRLLP Trigger: TGGTAGAAGCCGTCCAACTCATAGCTGATGGAAAAG...GACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCTGACGGAGATGAGGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | AACCCTCTTCTTGGTTCTAGTATCTACTTTGTGGCTTCCAGACGGCCCCTCCTTTCACCATCTGTCCATTaGTCTCTGCCCAGGCTCCAG | + |
Preference number: 4 (lower is better) Translates to: NPLLGSSIYFVASRRPLLSPSVH*SLPRLQ Trigger: CTGGAGCCTGGGCAGAGATCAATGGACAGATGGTGA...AAGGAGGGGCCGTCTGGAAGCCACAAAGTAGATACTAGAACCAAGAAGAGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | CATAGCCTGGTTGACCTCAGGTCAGCAATAAGGACCCTGCCCTGCCCTGGCCTGCAAACTGTCCATTTATaGAACACTGGTAGGGGATTT | + |
Preference number: 4 (lower is better) Translates to: HSLVDLRSAIRTLPCPGLQTVHL*NTGRGF Trigger: AAATCCCCTACCAGTGTTTCATAAATGGACAGTTTG...CAGGCCAGGGCAGGGCAGGGTCCTTATTGCTGACCTGAGGTCAACCAGGCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | CGCGGAAGGCACTGCTACTCCTGTTTAACACGGGAGGAGGCCAGAGCTCAGACAGCTCTGGCCAATAAGTaGCAACTTCAGCTTGTTTTT | + |
Preference number: 4 (lower is better) Translates to: RGRHCYSCLTREEARAQTALANK*QLQLVF Trigger: AAAAACAAGCTGAAGTTGGCACTTATTGGCCAGAGC...TGTCTGAGCTCTGGCCTCCTCCCGTGTTAAACAGGAGTAGCAGTGCCTTCCGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR GCA 90 bp | CCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGAAGCATTGAAGTGGGCTGTCTCTCCTTCTTCTGGATaGCTTCATATGTTGCCCCCT | + |
Preference number: 4 (lower is better) Translates to: PSSSPSGSSAPEALKWAVSPSSG*LHMLPP Trigger: AGGGGGCAACATATGAAGGCATCCAGAAGAAGGAGA...GACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCTGACGGAGATGAGGAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | CCTGGAGACAGCAAAGTAAGCATCCAAGGACAAGGTGACCCTTTTCCTGGTGCCCCAGTCTCACAGTACTaGAGCAGCTTTTCCAAGTGC | + |
Preference number: 4 (lower is better) Translates to: PGDSKVSIQGQGDPFPGAPVSQY*SSFSKC Trigger: GCACTTGGAAAAGCTGCTGCAGTACTGTGAGACTGG...GGCACCAGGAAAAGGGTCACCTTGTCCTTGGATGCTTACTTTGCTGTCTCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR GCA 90 bp | ATCAGTTCTGTGCTCAGGAATTCCCCTTTGTCTGGTTGCATGTCAGTGGTGATAAGTGTGGCCCCCTCCTaGACCCCAGTCTCACAGTAC | + |
Preference number: 4 (lower is better) Translates to: ISSVLRNSPLSGCMSVVISVAPS*TPVSQY Trigger: GTACTGTGAGACTGGGGTGCAGGAGGGGGCCACACT...TATCACCACTGACATGCAACCAGACAAAGGGGAATTCCTGAGCACAGAACTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR TCA 90 bp | AACCCTCTTCTTGGTTCTAGTATCTACTTTGTGGCTTCCAGACGGCCCCTCCTTCAAGGCCATTTTTGGTaGCAAGACCGGGCTTCTTGG | + |
Preference number: 4 (lower is better) Translates to: NPLLGSSIYFVASRRPLLQGHFW*QDRASW Trigger: CCAAGAAGCCCGGTCTTGTCACCAAAAATGGCCTTG...AAGGAGGGGCCGTCTGGAAGCCACAAAGTAGATACTAGAACCAAGAAGAGGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | CGCGGAAGGCACTGCTACTCCTGTTTAACACGGGAGGAGGCCAGAGCTCAGACAGTTTCTCACCATCAGTaGTTTTCCATCATTCCCAAA | + |
Preference number: 4 (lower is better) Translates to: RGRHCYSCLTREEARAQTVSHHQ*FSIIPK Trigger: TTTGGGAATGATGGAAAAGCACTGATGGTGAGAAAC...TGTCTGAGCTCTGGCCTCCTCCCGTGTTAAACAGGAGTAGCAGTGCCTTCCGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | CCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGAAGCATTGAAGTGGGCTGTCTTTCCGTCCTCAAACTaGAGGTTTCTCACCATCAGT | + |
Preference number: 4 (lower is better) Translates to: PSSSPSGSSAPEALKWAVFPSSN*RFLTIS Trigger: ACTGATGGTGAGAAACCTGCAGTTTGAGGACGGAAA...GACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCTGACGGAGATGAGGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | TACTTTGTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGACTGAATATTATCAGTaGGGATTTGCCACCAAGCTC | + |
Preference number: 4 (lower is better) Translates to: YFVASRRPLLPHLRQGLQTEYYQ*GFATKL Trigger: GAGCTTGGTGGCAAATCCCCACTGATAATATTCAGT...CTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCACAAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | AACCCTCTTCTTGGTTCTAGTATCTACTTTGTGGCTTCCAGACGGCCCCTCCTTACGTCACACGATCTCTaGAGAAGGATGGGTCCTGTA | + |
Preference number: 4 (lower is better) Translates to: NPLLGSSIYFVASRRPLLTSHDL*RRMGPV Trigger: TACAGGACCCATCCTTCTTCAGAGATCGTGTGACGT...AAGGAGGGGCCGTCTGGAAGCCACAAAGTAGATACTAGAACCAAGAAGAGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | CCTGGAGACAGCAAAGTAAGCATCCAAGGACAAGGTGACCCTTTTCCTGGTGCCGCACAACCTTTTGGATaGAATCTCCAAACTTGGTGG | + |
Preference number: 4 (lower is better) Translates to: PGDSKVSIQGQGDPFPGAAQPFG*NLQTWW Trigger: CCACCAAGTTTGGAGATTTCATCCAAAAGGTTGTGC...GGCACCAGGAAAAGGGTCACCTTGTCCTTGGATGCTTACTTTGCTGTCTCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR TCA 90 bp | CTCAGAAGCTGCCTGTCTGTCACAGTGGGTTACAAAATAGTCAAAGGCACAAAGCTGAGGTGGATCCAGTaGAGCCAAGCTTGCGGATGT | + |
Preference number: 4 (lower is better) Translates to: LRSCLSVTVGYKIVKGTKLRWIQ*SQACGC Trigger: ACATCCGCAAGCTTGGCTTCACTGGATCCACCTCAG...CTTTGTGCCTTTGACTATTTTGTAACCCACTGTGACAGACAGGCAGCTTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | CTCAGAAGCTGCCTGTCTGTCACAGTGGGTTACAAAATAGTCAAAGGCACAAAGGATCTGTTTGCCCACTaGGGTGGATCCAGTGAAGCC | + |
Preference number: 4 (lower is better) Translates to: LRSCLSVTVGYKIVKGTKDLFAH*GGSSEA Trigger: GGCTTCACTGGATCCACCTCAGTGGGCAAACAGATC...CTTTGTGCCTTTGACTATTTTGTAACCCACTGTGACAGACAGGCAGCTTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | AACCCTCTTCTTGGTTCTAGTATCTACTTTGTGGCTTCCAGACGGCCCCTCCTTTTGGCAAGGTACATGTaGTCTTCCACGCCTGTGAAC | + |
Preference number: 4 (lower is better) Translates to: NPLLGSSIYFVASRRPLLLARYM*SSTPVN Trigger: GTTCACAGGCGTGGAAGATCACATGTACCTTGCCAA...AAGGAGGGGCCGTCTGGAAGCCACAAAGTAGATACTAGAACCAAGAAGAGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | CCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGAAGCATTGAAGTGGGCTGTCATCCAAACCATCATCTaGCCAGAAAACAGAAAACCC | + |
Preference number: 4 (lower is better) Translates to: PSSSPSGSSAPEALKWAVIQTII*PENRKP Trigger: GGGTTTTCTGTTTTCTGGGCAGATGATGGTTTGGAT...GACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCTGACGGAGATGAGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | AACCCTCTTCTTGGTTCTAGTATCTACTTTGTGGCTTCCAGACGGCCCCTCCTTCCTCGAATCCAGTTATaGAAACCTTCAGCAGGCTGG | + |
Preference number: 4 (lower is better) Translates to: NPLLGSSIYFVASRRPLLPRIQL*KPSAGW Trigger: CCAGCCTGCTGAAGGTTTGCATAACTGGATTCGAGG...AAGGAGGGGCCGTCTGGAAGCCACAAAGTAGATACTAGAACCAAGAAGAGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | CTCAGAAGCTGCCTGTCTGTCACAGTGGGTTACAAAATAGTCAAAGGCACAAAGGACCTTAATGGTCTCTaGCACCTTCAGCTCCTCGGC | + |
Preference number: 4 (lower is better) Translates to: LRSCLSVTVGYKIVKGTKDLNGL*HLQLLG Trigger: GCCGAGGAGCTGAAGGTGGCAGAGACCATTAAGGTC...CTTTGTGCCTTTGACTATTTTGTAACCCACTGTGACAGACAGGCAGCTTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | AACCCTCTTCTTGGTTCTAGTATCTACTTTGTGGCTTCCAGACGGCCCCTCCTTAAACAGCCGCCCAGCTaGAATGCAGTTCTCTCCTTT | + |
Preference number: 4 (lower is better) Translates to: NPLLGSSIYFVASRRPLLKQPPS*NAVLSF Trigger: AAAGGAGAGAACTGCATTGCAGCTGGGCGGCTGTTT...AAGGAGGGGCCGTCTGGAAGCCACAAAGTAGATACTAGAACCAAGAAGAGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | AACCCTCTTCTTGGTTCTAGTATCTACTTTGTGGCTTCCAGACGGCCCCTCCTTTCCACCAAATGGGGCTaGCACGTCTGTCTTGTTGTA | + |
Preference number: 4 (lower is better) Translates to: NPLLGSSIYFVASRRPLLSTKWG*HVCLVV Trigger: TACAACAAGACAGACGTGGCAGCCCCATTTGGTGGA...AAGGAGGGGCCGTCTGGAAGCCACAAAGTAGATACTAGAACCAAGAAGAGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | CCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGAAGCATTGAAGTGGGCTGTCTTTCCAAAGCCAGATTaGTTCATTCCACCAAATGGG | + |
Preference number: 4 (lower is better) Translates to: PSSSPSGSSAPEALKWAVFPKPD*FIPPNG Trigger: CCCATTTGGTGGAATGAAGCAATCTGGCTTTGGAAA...GACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCTGACGGAGATGAGGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | CCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGAAGCATTGAAGTGGGCTGTCCTCCGCACAACCTTTTaGATGAAATCTCCAAACTTG | + |
Preference number: 4 (lower is better) Translates to: PSSSPSGSSAPEALKWAVLRTTF*MKSPNL Trigger: CAAGTTTGGAGATTTCATCCAAAAGGTTGTGCGGAG...GACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCTGACGGAGATGAGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | AACCCTCTTCTTGGTTCTAGTATCTACTTTGTGGCTTCCAGACGGCCCCTCCTTCTTCATTCCACCAAATaGGGCTGCCACGTCTGTCTT | + |
Preference number: 4 (lower is better) Translates to: NPLLGSSIYFVASRRPLLLHSTK*GCHVCL Trigger: AAGACAGACGTGGCAGCCCCATTTGGTGGAATGAAG...AAGGAGGGGCCGTCTGGAAGCCACAAAGTAGATACTAGAACCAAGAAGAGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | AGGAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGCTCCGCAACTCTGTCTaGTCTCTTCCACCAGCCTCA | + |
Preference number: 4 (lower is better) Translates to: RRKEEDRCHILCRINWCLLRNSV*SLPPAS Trigger: TGAGGCTGGTGGAAGAGATCAGACAGAGTTGCGGAG...CAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | CTCAGAAGCTGCCTGTCTGTCACAGTGGGTTACAAAATAGTCAAAGGCACAAAGTTCCATCTGTGGGGTTaGCAGTGGCGTAAGTCTCTC | + |
Preference number: 4 (lower is better) Translates to: LRSCLSVTVGYKIVKGTKFHLWG*QWRKSL Trigger: GAGAGACTTACGCCACTGTCAACCCCACAGATGGAA...CTTTGTGCCTTTGACTATTTTGTAACCCACTGTGACAGACAGGCAGCTTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | TACTTTGTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGCGAGTGTCACTGTTTTaGTTTTCAGGTATTCATTCA | + |
Preference number: 4 (lower is better) Translates to: YFVASRRPLLPHLRQGLQRVSLF*FSGIHS Trigger: TGAATGAATACCTGAAAATCAAAACAGTGACACTCG...CTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCACAAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | GCTTGTGTATTGCAGTACATTGCTGTGTATCTGCTGCTCTGTGTGAGGCCCTCATCTCCTTCTTCTGGATaGCTTCATATGTTGCCCCCT | + |
Preference number: 4 (lower is better) Translates to: ACVLQYIAVYLLLCVRPSSPSSG*LHMLPP Trigger: AGGGGGCAACATATGAAGGCATCCAGAAGAAGGAGA...TGAGGGCCTCACACAGAGCAGCAGATACACAGCAATGTACTGCAATACACAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR GCA 90 bp | AGGAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGCTGTCCATTGATCTCTaGCCAGGCTCCAGGGACCTT | + |
Preference number: 4 (lower is better) Translates to: RRKEEDRCHILCRINWCLLSIDL*PGSRDL Trigger: AAGGTCCCTGGAGCCTGGGCAGAGATCAATGGACAG...CAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | AGGAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGAAAGGCGTCCTTGGCTaGGGCTACTGCTCTGTCAAC | + |
Preference number: 4 (lower is better) Translates to: RRKEEDRCHILCRINWCLKGVLG*GYCSVN Trigger: GTTGACAGAGCAGTAGCCGCAGCCAAGGACGCCTTT...CAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | AACCCTCTTCTTGGTTCTAGTATCTACTTTGTGGCTTCCAGACGGCCCCTCCTTAAAGTACTGGGAGGCTaGAATCATCTTTCCGTCCTC | + |
Preference number: 4 (lower is better) Translates to: NPLLGSSIYFVASRRPLLKVLGG*NHLSVL Trigger: GAGGACGGAAAGATGATTCCAGCCTCCCAGTACTTT...AAGGAGGGGCCGTCTGGAAGCCACAAAGTAGATACTAGAACCAAGAAGAGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | AACCCTCTTCTTGGTTCTAGTATCTACTTTGTGGCTTCCAGACGGCCCCTCCTTCAATCACAGGGGTGTTaGTTAAAATTCGAGCCCAGA | + |
Preference number: 4 (lower is better) Translates to: NPLLGSSIYFVASRRPLLQSQGC*LKFEPR Trigger: TCTGGGCTCGAATTTTAAGCAACACCCCTGTGATTG...AAGGAGGGGCCGTCTGGAAGCCACAAAGTAGATACTAGAACCAAGAAGAGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | GCTTGTGTATTGCAGTACATTGCTGTGTATCTGCTGCTCTGTGTGAGGCCCTCATTTATTGAAAAACACTaGGCCCATGCCCATCCGTAC | + |
Preference number: 4 (lower is better) Translates to: ACVLQYIAVYLLLCVRPSFIEKH*AHAHPY Trigger: GTACGGATGGGCATGGGCGCAGTGTTTTTCAATAAA...TGAGGGCCTCACACAGAGCAGCAGATACACAGCAATGTACTGCAATACACAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR GCA 90 bp | AACCCTCTTCTTGGTTCTAGTATCTACTTTGTGGCTTCCAGACGGCCCCTCCTTTTTATTGAAAAACACTaGGCCCATGCCCATCCGTAC | + |
Preference number: 4 (lower is better) Translates to: NPLLGSSIYFVASRRPLLFIEKH*AHAHPY Trigger: GTACGGATGGGCATGGGCGCAGTGTTTTTCAATAAA...AAGGAGGGGCCGTCTGGAAGCCACAAAGTAGATACTAGAACCAAGAAGAGGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | GAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGAAAGCAGCTTTTCCAAGTaGGCTCTGTGGTTCTGGGGC | + |
Preference number: 4 (lower is better) Translates to: EKGRRQVSHSLQDKLVFESSFSK*ALWFWG Trigger: GCCCCAGAACCACAGAGCGCACTTGGAAAAGCTGCT...TTCAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | CTCAGAAGCTGCCTGTCTGTCACAGTGGGTTACAAAATAGTCAAAGGCACAAAGTGTCCGAACAGGCTCTaGCCAATAAGTGCCAACTTC | + |
Preference number: 4 (lower is better) Translates to: LRSCLSVTVGYKIVKGTKCPNRL*PISANF Trigger: GAAGTTGGCACTTATTGGCCAGAGCCTGTTCGGACA...CTTTGTGCCTTTGACTATTTTGTAACCCACTGTGACAGACAGGCAGCTTCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR CCA 90 bp | AGGAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGCGAATTCGTCGTGGATaGCCTCTTCCACAAACAGCC | + |
Preference number: 4 (lower is better) Translates to: RRKEEDRCHILCRINWCLRIRRG*PLPQTA Trigger: GGCTGTTTGTGGAAGAGGCCATCCACGACGAATTCG...CAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | CTTGGGATGGAATATATAGCGTCAATAAACTCTTTCCTCTCAGCTTTGTGTCAGCCTTGTCTGGCACTGTaGACACTCCCACTACTCGGT | + |
Preference number: 4 (lower is better) Translates to: LGMEYIASINSFLSALCQPCLAL*TLPLLG Trigger: ACCGAGTAGTGGGAGTGTTCACAGTGCCAGACAAGG...CTGACACAAAGCTGAGAGGAAAGAGTTTATTGACGCTATATATTCCATCCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR TCA 90 bp | ATCAGTTCTGTGCTCAGGAATTCCCCTTTGTCTGGTTGCATGTCAGTGGTGATACGTAAGTTCTACCACTaGTGTCTCACCCGCAGAAAA | + |
Preference number: 4 (lower is better) Translates to: ISSVLRNSPLSGCMSVVIRKFYH*CLTRRK Trigger: TTTTCTGCGGGTGAGACATCAGTGGTAGAACTTACG...TATCACCACTGACATGCAACCAGACAAAGGGGAATTCCTGAGCACAGAACTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR TCA 90 bp | AGGAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGGTGGCTCCTTCTTGGTaGAGGTCAGGTTGTAATTCG | + |
Preference number: 4 (lower is better) Translates to: RRKEEDRCHILCRINWCLVAPSW*RSGCNS Trigger: CGAATTACAACCTGACCTTCACCAAGAAGGAGCCAC...CAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | GGCCTTACTTGGGATGGAATATATAGCGTCAATAAACTCTTTCCTCTCAGCTTTCTGAGGTGGATCCAGTaGAGCCAAGCTTGCGGATGT | + |
Preference number: 4 (lower is better) Translates to: GLTWDGIYSVNKLFPLSFLRWIQ*SQACGC Trigger: ACATCCGCAAGCTTGGCTTCACTGGATCCACCTCAG...AAAGCTGAGAGGAAAGAGTTTATTGACGCTATATATTCCATCCCAAGTAAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR TCA 90 bp | AGGAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGCAGCACAGCTTTTCATaGTCTGTTTGCCCACTGAGG | + |
Preference number: 4 (lower is better) Translates to: RRKEEDRCHILCRINWCLQHSFS*SVCPLR Trigger: CCTCAGTGGGCAAACAGATCATGAAAAGCTGTGCTG...CAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | GGCCTTACTTGGGATGGAATATATAGCGTCAATAAACTCTTTCCTCTCAGCTTTGATGCCTTCATATGTTaGCCCCTCTTCTGGCTGGGG | + |
Preference number: 4 (lower is better) Translates to: GLTWDGIYSVNKLFPLSFDAFIC*PLFWLG Trigger: CCCCAGCCAGAAGAGGGGGCAACATATGAAGGCATC...AAAGCTGAGAGGAAAGAGTTTATTGACGCTATATATTCCATCCCAAGTAAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR GCA 90 bp | CCAGCAGATACAGTCGTGAGAAGCAACATGTCCTGGAGACAGCAAAGTAAGCATTTTCCGTCCTCAAACTaGAGGTTTCTCACCATCAGT | + |
Preference number: 4 (lower is better) Translates to: PADTVVRSNMSWRQQSKHFPSSN*RFLTIS Trigger: ACTGATGGTGAGAAACCTGCAGTTTGAGGACGGAAA...ATGCTTACTTTGCTGTCTCCAGGACATGTTGCTTCTCACGACTGTATCTGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR CCA 90 bp | CTCAGAAGCTGCCTGTCTGTCACAGTGGGTTACAAAATAGTCAAAGGCACAAAGAAAGTACTGGGAGGCTaGAATCATCTTTCCGTCCTC | + |
Preference number: 4 (lower is better) Translates to: LRSCLSVTVGYKIVKGTKKVLGG*NHLSVL Trigger: GAGGACGGAAAGATGATTCCAGCCTCCCAGTACTTT...CTTTGTGCCTTTGACTATTTTGTAACCCACTGTGACAGACAGGCAGCTTCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | ATCAGTTCTGTGCTCAGGAATTCCCCTTTGTCTGGTTGCATGTCAGTGGTGATACCCGCAGAAAAGTACTaGGAGGCTGGAATCATCTTT | + |
Preference number: 4 (lower is better) Translates to: ISSVLRNSPLSGCMSVVIPAEKY*EAGIIF Trigger: AAAGATGATTCCAGCCTCCCAGTACTTTTCTGCGGG...TATCACCACTGACATGCAACCAGACAAAGGGGAATTCCTGAGCACAGAACTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR CCA 90 bp | AGGAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGCCAGCGCTTCTATGGTaGCCAGCTCTTCTTGGTTTT | + |
Preference number: 4 (lower is better) Translates to: RRKEEDRCHILCRINWCLPALLW*PALLGF Trigger: AAAACCAAGAAGAGCTGGCCACCATAGAAGCGCTGG...CAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | CTTGGGATGGAATATATAGCGTCAATAAACTCTTTCCTCTCAGCTTTGTGTCAGCAAGGCCATTTTTGGTaGCAAGACCGGGCTTCTTGG | + |
Preference number: 4 (lower is better) Translates to: LGMEYIASINSFLSALCQQGHFW*QDRASW Trigger: CCAAGAAGCCCGGTCTTGTCACCAAAAATGGCCTTG...CTGACACAAAGCTGAGAGGAAAGAGTTTATTGACGCTATATATTCCATCCCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR TCA 90 bp | CTCAGAAGCTGCCTGTCTGTCACAGTGGGTTACAAAATAGTCAAAGGCACAAAGCCTCACAACATCCATTaGGCTCGCTCCAGATTTAAA | + |
Preference number: 4 (lower is better) Translates to: LRSCLSVTVGYKIVKGTKPHNIH*ARSRFK Trigger: TTTAAATCTGGAGCGAGCTCAATGGATGTTGTGAGG...CTTTGTGCCTTTGACTATTTTGTAACCCACTGTGACAGACAGGCAGCTTCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | CTCAGAAGCTGCCTGTCTGTCACAGTGGGTTACAAAATAGTCAAAGGCACAAAGAGTTCTCTCCTTTATTaGAAAACACTGCGCCCATGC | + |
Preference number: 4 (lower is better) Translates to: LRSCLSVTVGYKIVKGTKSSLLY*KTLRPC Trigger: GCATGGGCGCAGTGTTTTTCAATAAAGGAGAGAACT...CTTTGTGCCTTTGACTATTTTGTAACCCACTGTGACAGACAGGCAGCTTCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | TATAGCGTCAATAAACTCTTTCCTCTCAGCTTTGTGTCAGTAAAGTTCTTGGGCATCCACCACCATCTCTaGCTCTTCGTCCTCTCCTCT | + |
Preference number: 4 (lower is better) Translates to: YSVNKLFPLSFVSVKFLGIHHHL*LFVLSS Trigger: AGAGGAGAGGACGAAGAGGCAGAGATGGTGGTGGAT...GCCCAAGAACTTTACTGACACAAAGCTGAGAGGAAAGAGTTTATTGACGCTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR GCA 90 bp | GTCAATAAACTCTTTCCTCTCAGCTTTGTGTCAGTAAAGTTCTTGGGCTTAAGTAAAGGCGTCCTTGGCTaGGGCTACTGCTCTGTCAAC | + |
Preference number: 4 (lower is better) Translates to: VNKLFPLSFVSVKFLGLSKGVLG*GYCSVN Trigger: GTTGACAGAGCAGTAGCCGCAGCCAAGGACGCCTTT...ACTTAAGCCCAAGAACTTTACTGACACAAAGCTGAGAGGAAAGAGTTTATTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR GCA 90 bp | CTCAGAAGCTGCCTGTCTGTCACAGTGGGTTACAAAATAGTCAAAGGCACAAAGTTATCAGTGGGGATTTaGCACCAAGCTCAAGGGAAA | + |
Preference number: 4 (lower is better) Translates to: LRSCLSVTVGYKIVKGTKLSVGI*HQAQGK Trigger: TTTCCCTTGAGCTTGGTGGCAAATCCCCACTGATAA...CTTTGTGCCTTTGACTATTTTGTAACCCACTGTGACAGACAGGCAGCTTCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR GCA 90 bp | TATAGCGTCAATAAACTCTTTCCTCTCAGCTTTGTGTCAGTAAAGTTCTTGGGCAAGAAGCCTGGCCTCTaGACCTGTCTTCCTCCATAC | + |
Preference number: 4 (lower is better) Translates to: YSVNKLFPLSFVSVKFLGKKPGL*TCLPPY Trigger: GTATGGAGGAAGACAGGTGCAGAGGCCAGGCTTCTT...GCCCAAGAACTTTACTGACACAAAGCTGAGAGGAAAGAGTTTATTGACGCTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR GCA 90 bp | AACCCTCTTCTTGGTTCTAGTATCTACTTTGTGGCTTCCAGACGGCCCCTCCTTATATTCAGTGTTATTTaGTCTCTGCAACACCCCATC | + |
Preference number: 4 (lower is better) Translates to: NPLLGSSIYFVASRRPLLIFSVI*SLQHPI Trigger: GATGGGGTGTTGCAGAGAGCAAATAACACTGAATAT...AAGGAGGGGCCGTCTGGAAGCCACAAAGTAGATACTAGAACCAAGAAGAGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | GAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGAACCAGCGCTTCTATGGTaGCCAGCTCTTCTTGGTTTT | + |
Preference number: 4 (lower is better) Translates to: EKGRRQVSHSLQDKLVFEPALLW*PALLGF Trigger: AAAACCAAGAAGAGCTGGCCACCATAGAAGCGCTGG...TTCAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | AGGAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGACTTCAGCTTGTTTTTaGAATAAACCCGGCTGGTGG | + |
Preference number: 4 (lower is better) Translates to: RRKEEDRCHILCRINWCLTSACF*NKPGWW Trigger: CCACCAGCCGGGTTTATTTCAAAAACAAGCTGAAGT...CAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR TCA 90 bp | GAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGAACGTAAGTTCTACCACTaGTGTCTCACCCGCAGAAAA | + |
Preference number: 4 (lower is better) Translates to: EKGRRQVSHSLQDKLVFERKFYH*CLTRRK Trigger: TTTTCTGCGGGTGAGACATCAGTGGTAGAACTTACG...TTCAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR TCA 90 bp | GGCCTTACTTGGGATGGAATATATAGCGTCAATAAACTCTTTCCTCTCAGCTTTCAGCACAGCTTTTCATaGTCTGTTTGCCCACTGAGG | + |
Preference number: 4 (lower is better) Translates to: GLTWDGIYSVNKLFPLSFQHSFS*SVCPLR Trigger: CCTCAGTGGGCAAACAGATCATGAAAAGCTGTGCTG...AAAGCTGAGAGGAAAGAGTTTATTGACGCTATATATTCCATCCCAAGTAAGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR GCA 90 bp | AAACAGAATGTGTTTCTAGCAAATTCTAACCTGTGGACTTACCACCATTCTTGTAGCAGCTTTTCCAAGTaGGCTCTGTGGTTCTGGGGC | + |
Preference number: 4 (lower is better) Translates to: KQNVFLANSNLWTYHHSCSSFSK*ALWFWG Trigger: GCCCCAGAACCACAGAGCGCACTTGGAAAAGCTGCT...ACAAGAATGGTGGTAAGTCCACAGGTTAGAATTTGCTAGAAACACATTCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR GCA 90 bp | GGCCTTACTTGGGATGGAATATATAGCGTCAATAAACTCTTTCCTCTCAGCTTTTCCACCAAATGGGGCTaGCACGTCTGTCTTGTTGTA | + |
Preference number: 4 (lower is better) Translates to: GLTWDGIYSVNKLFPLSFSTKWG*HVCLVV Trigger: TACAACAAGACAGACGTGGCAGCCCCATTTGGTGGA...AAAGCTGAGAGGAAAGAGTTTATTGACGCTATATATTCCATCCCAAGTAAGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR CCA 90 bp | GAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGAAACCTCTAATGTCCAGTaGTTCTCCAGAAGGCACAGA | + |
Preference number: 4 (lower is better) Translates to: EKGRRQVSHSLQDKLVFETSNVQ*FSRRHR Trigger: TCTGTGCCTTCTGGAGAACCACTGGACATTAGAGGT...TTCAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR CAA 72 bp | GACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTaGAATGCACAGCTAAGAAAGGGTTGTCAGTGTTCA | + |
Preference number: 4 (lower is better) Translates to: DRCHILCRINWC*NAQLRKGCQCS Trigger: TGAACACTGACAACCCTTTCTTAGCTGTGCATTCAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR CAA 72 bp | GCCAATAAGAGGGTCTCCTCCGAACTTTACAGTACTTaGTCCCAAGTATGTAAATGTGGAAGAAAGGCTCAG | + |
Preference number: 4 (lower is better) Translates to: ANKRVSSELYST*SQVCKCGRKAQ Trigger: CTGAGCCTTTCTTCCACATTTACATACTTGGGACAAAGTACTGTAAAGTTCGGAGGAGACCCTCTTATTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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3UTR CAA 72 bp | TTGCTGCACATCAGTTCTGTGCTCAGGAATTCCCCTTaGTCTGGTTGCATGTCAGTGGTGATAATCAAACTT | + |
Preference number: 4 (lower is better) Translates to: LLHISSVLRNSP*SGCMSVVIIKL Trigger: AAGTTTGATTATCACCACTGACATGCAACCAGACAAAGGGGAATTCCTGAGCACAGAACTGATGTGCAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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3UTR CAA 72 bp | AGAGCAAAGCATCACTGTGGCCCTCCACACATTACTTaGACTCATGTACTATGGCAGAGTACATTTCCATGT | + |
Preference number: 4 (lower is better) Translates to: RAKHHCGPPHIT*THVLWQSTFPC Trigger: ACATGGAAATGTACTCTGCCATAGTACATGAGTCAAAGTAATGTGTGGAGGGCCACAGTGATGCTTTGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR GCA 90 bp | ATCAGTTCTGTGCTCAGGAATTCCCCTTTGTCTGGTTGCATGTCAGTGGTGATAGTTTCTCACCATCAGTaGTTTTCCATCATTCCCAAA | + |
Preference number: 4 (lower is better) Translates to: ISSVLRNSPLSGCMSVVIVSHHQ*FSIIPK Trigger: TTTGGGAATGATGGAAAAGCACTGATGGTGAGAAAC...TATCACCACTGACATGCAACCAGACAAAGGGGAATTCCTGAGCACAGAACTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR GCA 90 bp | GGCCTTACTTGGGATGGAATATATAGCGTCAATAAACTCTTTCCTCTCAGCTTTTTTCACGGTCAGCTCTaGAAACTTCAGAGCCGTCAA | + |
Preference number: 4 (lower is better) Translates to: GLTWDGIYSVNKLFPLSFFHGQL*KLQSRQ Trigger: TTGACGGCTCTGAAGTTTGCAGAGCTGACCGTGAAA...AAAGCTGAGAGGAAAGAGTTTATTGACGCTATATATTCCATCCCAAGTAAGGCC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR GCA 90 bp | TATAGCGTCAATAAACTCTTTCCTCTCAGCTTTGTGTCAGTAAAGTTCTTGGGCGTGTTATTTGCTCTCTaGAACACCCCATCGATGTCC | + |
Preference number: 4 (lower is better) Translates to: YSVNKLFPLSFVSVKFLGVLFAL*NTPSMS Trigger: GGACATCGATGGGGTGTTGCAGAGAGCAAATAACAC...GCCCAAGAACTTTACTGACACAAAGCTGAGAGGAAAGAGTTTATTGACGCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR CCA 90 bp | GGCCTTACTTGGGATGGAATATATAGCGTCAATAAACTCTTTCCTCTCAGCTTTACCTCTAATGTCCAGTaGTTCTCCAGAAGGCACAGA | + |
Preference number: 4 (lower is better) Translates to: GLTWDGIYSVNKLFPLSFTSNVQ*FSRRHR Trigger: TCTGTGCCTTCTGGAGAACCACTGGACATTAGAGGT...AAAGCTGAGAGGAAAGAGTTTATTGACGCTATATATTCCATCCCAAGTAAGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR TCA 90 bp | AAACAGAATGTGTTTCTAGCAAATTCTAACCTGTGGACTTACCACCATTCTTGTCTTCTACCATGGCCTTaGTCCCCTCAGGAAAAAGGA | + |
Preference number: 4 (lower is better) Translates to: KQNVFLANSNLWTYHHSCLLPWP*SPQEKG Trigger: TCCTTTTTCCTGAGGGGATCAAGGCCATGGTAGAAG...ACAAGAATGGTGGTAAGTCCACAGGTTAGAATTTGCTAGAAACACATTCTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR TCA 90 bp | CTCAGAAGCTGCCTGTCTGTCACAGTGGGTTACAAAATAGTCAAAGGCACAAAGCGAGTGTCACTGTTTTaGTTTTCAGGTATTCATTCA | + |
Preference number: 4 (lower is better) Translates to: LRSCLSVTVGYKIVKGTKRVSLF*FSGIHS Trigger: TGAATGAATACCTGAAAATCAAAACAGTGACACTCG...CTTTGTGCCTTTGACTATTTTGTAACCCACTGTGACAGACAGGCAGCTTCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | GAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGAACTCCGCACAACCTTTTaGATGAAATCTCCAAACTTG | + |
Preference number: 4 (lower is better) Translates to: EKGRRQVSHSLQDKLVFELRTTF*MKSPNL Trigger: CAAGTTTGGAGATTTCATCCAAAAGGTTGTGCGGAG...TTCAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CCA 90 bp | GTCAATAAACTCTTTCCTCTCAGCTTTGTGTCAGTAAAGTTCTTGGGCTTAAGTTCTCTTCCACCACTCTaGTTACGAATTCGTCGTGGA | + |
Preference number: 4 (lower is better) Translates to: VNKLFPLSFVSVKFLGLSSLPPL*LRIRRG Trigger: TCCACGACGAATTCGTAACCAGAGTGGTGGAAGAGA...ACTTAAGCCCAAGAACTTTACTGACACAAAGCTGAGAGGAAAGAGTTTATTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR GCA 90 bp | GTCAATAAACTCTTTCCTCTCAGCTTTGTGTCAGTAAAGTTCTTGGGCTTAAGTTTTCCAAAGCCAGATTaGTTCATTCCACCAAATGGG | + |
Preference number: 4 (lower is better) Translates to: VNKLFPLSFVSVKFLGLSFPKPD*FIPPNG Trigger: CCCATTTGGTGGAATGAAGCAATCTGGCTTTGGAAA...ACTTAAGCCCAAGAACTTTACTGACACAAAGCTGAGAGGAAAGAGTTTATTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR CCA 90 bp | GTCAATAAACTCTTTCCTCTCAGCTTTGTGTCAGTAAAGTTCTTGGGCTTAAGTACTGAATATTATCAGTaGGGATTTGCCACCAAGCTC | + |
Preference number: 4 (lower is better) Translates to: VNKLFPLSFVSVKFLGLSTEYYQ*GFATKL Trigger: GAGCTTGGTGGCAAATCCCCACTGATAATATTCAGT...ACTTAAGCCCAAGAACTTTACTGACACAAAGCTGAGAGGAAAGAGTTTATTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR TCA 90 bp | ATCTCAAGTCAGTGTAAAATGAGTCAAGATGTCAGGACAGGCTACTTCTACAAACAAACTGTCCATTTATaGAACACTGGTAGGGGATTT | + |
Preference number: 4 (lower is better) Translates to: ISSQCKMSQDVRTGYFYKQTVHL*NTGRGF Trigger: AAATCCCCTACCAGTGTTTCATAAATGGACAGTTTG...TTTGTAGAAGTAGCCTGTCCTGACATCTTGACTCATTTTACACTGACTTGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR CAA 90 bp | CGCGGAAGGCACTGCTACTCCTGTTTAACACGGGAGGAGGCCAGAGCTCAGACATTGAGCACCAGGGTGTaGCCTGCCGCCAGGCACGCT | + |
Preference number: 5 (lower is better) Translates to: RGRHCYSCLTREEARAQTLSTRV*PAARHA Trigger: AGCGTGCCTGGCGGCAGGCAACACCCTGGTGCTCAA...TGTCTGAGCTCTGGCCTCCTCCCGTGTTAAACAGGAGTAGCAGTGCCTTCCGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS GCA 90 bp | TCCACGCCTGTGAACACAGTGGGTTCCATGAAGAAGCCTGGCCTCTaGACCTGTCTTCCTCCATACACCAGTGTGGCCCCCTCCTGCACC | + |
Preference number: 5 (lower is better) Translates to: STPVNTVGSMKKPGL*TCLPPYTSVAPSCT Trigger: GGTGCAGGAGGGGGCCACACTGGTGTATGGAGGAAGACAGGTGCAGAGGCCAGGCTTCTTCATGGAACCCACTGTGTTCACAGGCGTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | CATAGCCTGGTTGACCTCAGGTCAGCAATAAGGACCCTGCCCTGCCCTGGCCTGTTCGGCCGGGCCTGGTaGATTGGAATTGTAGAACCC | + |
Preference number: 5 (lower is better) Translates to: HSLVDLRSAIRTLPCPGLFGRAW*IGIVEP Trigger: GGGTTCTACAATTCCAATCAACCAGGCCCGGCCGAA...CAGGCCAGGGCAGGGCAGGGTCCTTATTGCTGACCTGAGGTCAACCAGGCTATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | CCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGAAGCATTGAAGTGGGCTGTCGGATGCCTTCATATGTaGCCCCCTCTTCTGGCTGGG | + |
Preference number: 5 (lower is better) Translates to: PSSSPSGSSAPEALKWAVGCLHM*PPLLAG Trigger: CCCAGCCAGAAGAGGGGGCAACATATGAAGGCATCC...GACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCTGACGGAGATGAGGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | CCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGAAGCATTGAAGTGGGCTGTCTTCTCAAAGGCGTCCTaGGCTGCGGCTACTGCTCTG | + |
Preference number: 5 (lower is better) Translates to: PSSSPSGSSAPEALKWAVFSKAS*AAATAL Trigger: CAGAGCAGTAGCCGCAGCCAAGGACGCCTTTGAGAA...GACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCTGACGGAGATGAGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | GTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGATTATCAGTGGGGATTaGCCACCAAGCTCAAGGGAA | + |
Preference number: 5 (lower is better) Translates to: VASRRPLLPHLRQGLQLLIISGD*PPSSRE Trigger: TTCCCTTGAGCTTGGTGGCAAATCCCCACTGATAAT...CAGGAGCTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS GCA 90 bp | GAAGGGGAGCACGTTGAGCTCGGCTCCCACCGACTGGTAAGCTTCTaGTACCTCCTTGATGGTTTTACCCTTGAGTCTCCATCGAGGGAA | + |
Preference number: 5 (lower is better) Translates to: EGEHVELGSHRLVSF*YLLDGFTLESPSRE Trigger: TTCCCTCGATGGAGACTCAAGGGTAAAACCATCAAGGAGGTAGCAGAAGCTTACCAGTCGGTGGGAGCCGAGCTCAACGTGCTCCCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR CAA 90 bp | CATAGCCTGGTTGACCTCAGGTCAGCAATAAGGACCCTGCCCTGCCCTGGCCTGATGATTAGTGTCCAGTaGATGGCAGAAGCTCCTCTG | + |
Preference number: 5 (lower is better) Translates to: HSLVDLRSAIRTLPCPGLMISVQ*MAEAPL Trigger: CAGAGGAGCTTCTGCCATCAACTGGACACTAATCAT...CAGGCCAGGGCAGGGCAGGGTCCTTATTGCTGACCTGAGGTCAACCAGGCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | GTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGGAAACTTTCTTCAGGTaGCTCACAGCACAGCTTTTC | + |
Preference number: 5 (lower is better) Translates to: VASRRPLLPHLRQGLQLLETFFR*LTAQLF Trigger: GAAAAGCTGTGCTGTGAGCAACCTGAAGAAAGTTTC...CAGGAGCTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CCA 90 bp | TCAGAGCCAGGGTGTAGACAGCCCCGGAATCCAGCGCTTCTATGGTaGCCAGCTCTTCTTGGTTTTCTTCCATTAGGTCAGCGAGTCTGT | + |
Preference number: 5 (lower is better) Translates to: SEPGCRQPRNPALLW*PALLGFLPLGQRVC Trigger: ACAGACTCGCTGACCTAATGGAAGAAAACCAAGAAGAGCTGGCCACCATAGAAGCGCTGGATTCCGGGGCTGTCTACACCCTGGCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | TACTTTGTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGATGTTAATCACCCCCTaGGGAAAGCCAGCTTTCACG | + |
Preference number: 5 (lower is better) Translates to: YFVASRRPLLPHLRQGLQMLITP*GKPAFT Trigger: CGTGAAAGCTGGCTTTCCCAAGGGGGTGATTAACAT...CTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCACAAAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | AGACAGGAGGTCACTGACTCCCCTGACCACACACAGCCAGTGAGCAGCAGAGCCCAGTTCTCTCCTTTATaGAAAAACACTGCGCCCATG | + |
Preference number: 5 (lower is better) Translates to: RQEVTDSPDHTQPVSSRAQFSPL*KNTAPM Trigger: CATGGGCGCAGTGTTTTTCAATAAAGGAGAGAACTG...GGCTCTGCTGCTCACTGGCTGTGTGTGGTCAGGGGAGTCAGTGACCTCCTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR CAA 90 bp | GTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGCATATTCAGTGTTATTaGCTCTCTGCAACACCCCAT | + |
Preference number: 5 (lower is better) Translates to: VASRRPLLPHLRQGLQLLHIQCY*LSATPH Trigger: ATGGGGTGTTGCAGAGAGCAAATAACACTGAATATG...CAGGAGCTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS TCA 90 bp | TGTAGACGTCTTCATTCTGCAGCTGAAGCCCTCCGCAACTCTGTCTaGTCTCTTCCACCAGCCTCACAACATCCATTGAGCTCGCTCCAG | + |
Preference number: 5 (lower is better) Translates to: CRRLHSAAEALRNSV*SLPPASQHPLSSLQ Trigger: CTGGAGCGAGCTCAATGGATGTTGTGAGGCTGGTGGAAGAGATCAGACAGAGTTGCGGAGGGCTTCAGCTGCAGAATGAAGACGTCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | TACTTTGTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGTCAATCACAGGGGTGTaGCTTAAAATTCGAGCCCAG | + |
Preference number: 5 (lower is better) Translates to: YFVASRRPLLPHLRQGLQSITGV*LKIRAQ Trigger: CTGGGCTCGAATTTTAAGCAACACCCCTGTGATTGA...CTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCACAAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | TACTTTGTGGCTTCCAGACGGCCCCTCCTTCCTCATCTCCGTCAGGGTCTTCAGATTATCAGTGGGGATTaGCCACCAAGCTCAAGGGAA | + |
Preference number: 5 (lower is better) Translates to: YFVASRRPLLPHLRQGLQIISGD*PPSSRE Trigger: TTCCCTTGAGCTTGGTGGCAAATCCCCACTGATAAT...CTGAAGACCCTGACGGAGATGAGGAAGGAGGGGCCGTCTGGAAGCCACAAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS TCA 90 bp | CCAGCTCTTCTTGGTTTTCTTCCATTAGGTCAGCGAGTCTGTACATaGGTCTTCCTCTGTCTCTGGCGTTCATCCTCCCCCATTCGCCGT | + |
Preference number: 5 (lower is better) Translates to: PALLGFLPLGQRVCT*VFLCLWRSSSPIRR Trigger: ACGGCGAATGGGGGAGGATGAACGCCAGAGACAGAGGAAGACTCATGTACAGACTCGCTGACCTAATGGAAGAAAACCAAGAAGAGCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | CCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGAAGCATTGAAGTGGGCTGTCCTTTTCATGATCTGTTaGCCCACTGAGGTGGATCCA | + |
Preference number: 5 (lower is better) Translates to: PSSSPSGSSAPEALKWAVLFMIC*PTEVDP Trigger: TGGATCCACCTCAGTGGGCAAACAGATCATGAAAAG...GACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCTGACGGAGATGAGGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | CCTGGAGACAGCAAAGTAAGCATCCAAGGACAAGGTGACCCTTTTCCTGGTGCCATGATTAGTGTCCAGTaGATGGCAGAAGCTCCTCTG | + |
Preference number: 5 (lower is better) Translates to: PGDSKVSIQGQGDPFPGAMISVQ*MAEAPL Trigger: CAGAGGAGCTTCTGCCATCAACTGGACACTAATCAT...GGCACCAGGAAAAGGGTCACCTTGTCCTTGGATGCTTACTTTGCTGTCTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR CAA 90 bp | CCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGAAGCATTGAAGTGGGCTGTCGAAACTTTCTTCAGGTaGCTCACAGCACAGCTTTTC | + |
Preference number: 5 (lower is better) Translates to: PSSSPSGSSAPEALKWAVETFFR*LTAQLF Trigger: GAAAAGCTGTGCTGTGAGCAACCTGAAGAAAGTTTC...GACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCTGACGGAGATGAGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS TCA 90 bp | TCCGCAACTCTGTCTGATCTCTTCCACCAGCCTCACAACATCCATTaGGCTCGCTCCAGATTTAAAGAAGTCCGTGGAGTCCTCAATCAC | + |
Preference number: 5 (lower is better) Translates to: SATLSDLFHQPHNIH*ARSRFKEVRGVLNH Trigger: GTGATTGAGGACTCCACGGACTTCTTTAAATCTGGAGCGAGCTCAATGGATGTTGTGAGGCTGGTGGAAGAGATCAGACAGAGTTGCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS TCA 90 bp | CTGCCTCTTCGTCCTCTCCTCTCAGTCTCCGCACAACCTTTTGGATaGAATCTCCAAACTTGGTGGCCATGTAGACGTCTTCATTCTGCA | + |
Preference number: 5 (lower is better) Translates to: LPLRPLLSVSAQPFG*NLQTWWPCRRLHSA Trigger: TGCAGAATGAAGACGTCTACATGGCCACCAAGTTTGGAGATTTCATCCAAAAGGTTGTGCGGAGACTGAGAGGAGAGGACGAAGAGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | CCTTCCTCATCTCCGTCAGGGTCTTCAGCTCCTGAAGCATTGAAGTGGGCTGTCTCTCCGCACAACCTTTaGGATGAAATCTCCAAACTT | + |
Preference number: 5 (lower is better) Translates to: PSSSPSGSSAPEALKWAVSPHNL*DEISKL Trigger: AAGTTTGGAGATTTCATCCAAAAGGTTGTGCGGAGA...GACAGCCCACTTCAATGCTTCAGGAGCTGAAGACCCTGACGGAGATGAGGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | AGGAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGTTCTCAAAGGCGTCCTaGGCTGCGGCTACTGCTCTG | + |
Preference number: 5 (lower is better) Translates to: RRKEEDRCHILCRINWCLFSKAS*AAATAL Trigger: CAGAGCAGTAGCCGCAGCCAAGGACGCCTTTGAGAA...CAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | CGCGGAAGGCACTGCTACTCCTGTTTAACACGGGAGGAGGCCAGAGCTCAGACATCGAGTGTCACTGTTTaGATTTTCAGGTATTCATTC | + |
Preference number: 5 (lower is better) Translates to: RGRHCYSCLTREEARAQTSSVTV*IFRYSF Trigger: GAATGAATACCTGAAAATCAAAACAGTGACACTCGA...TGTCTGAGCTCTGGCCTCCTCCCGTGTTAAACAGGAGTAGCAGTGCCTTCCGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS TCA 90 bp | CTGCGCCCATGCCCATCCGTACAGCCTTTTCAAGGTCACAATCACTaGATATTATCAGTGGGGATTTGCCACCAAGCTCAAGGGAAACTT | + |
Preference number: 5 (lower is better) Translates to: LRPCPSVQPFQGHNH*ILSVGICHQAQGKL Trigger: AAGTTTCCCTTGAGCTTGGTGGCAAATCCCCACTGATAATATTCAGTGATTGTGACCTTGAAAAGGCTGTACGGATGGGCATGGGCGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
||
CDS CCA 90 bp | TTCATCTTTTTAATCTCTTCCACCACTCTGGTTACGAATTCGTCGTaGATGGCCTCTTCCACAAACAGCCGCCCAGCTGCAATGCAGTTC | + |
Preference number: 5 (lower is better) Translates to: FIFLISSTTLVTNSS*MASSTNSRPAAMQF Trigger: GAACTGCATTGCAGCTGGGCGGCTGTTTGTGGAAGAGGCCATCCACGACGAATTCGTAACCAGAGTGGTGGAAGAGATTAAAAAGATGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | AGGAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGTTCGGCCGGGCCTGGTaGATTGGAATTGTAGAACCC | + |
Preference number: 5 (lower is better) Translates to: RRKEEDRCHILCRINWCLFGRAW*IGIVEP Trigger: GGGTTCTACAATTCCAATCAACCAGGCCCGGCCGAA...CAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
||
CDS-3UTR CAA 90 bp | CCAGCAGATACAGTCGTGAGAAGCAACATGTCCTGGAGACAGCAAAGTAAGCATATGTTAATCACCCCCTaGGGAAAGCCAGCTTTCACG | + |
Preference number: 5 (lower is better) Translates to: PADTVVRSNMSWRQQSKHMLITP*GKPAFT Trigger: CGTGAAAGCTGGCTTTCCCAAGGGGGTGATTAACAT...ATGCTTACTTTGCTGTCTCCAGGACATGTTGCTTCTCACGACTGTATCTGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS TCA 90 bp | GAAAAAGGAACCGGTTATAAAGCGAGTCCACTGTGTCATTGGGCTTaGCGTCACACGATCTCTGAAGAAGGATGGGTCCTGTATCCAAAC | + |
Preference number: 5 (lower is better) Translates to: EKGTGYKASPLCHWA*RHTISEEGWVLYPN Trigger: GTTTGGATACAGGACCCATCCTTCTTCAGAGATCGTGTGACGTCAAGCCCAATGACACAGTGGACTCGCTTTATAACCGGTTCCTTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
||
CDS-3UTR CAA 90 bp | TTCCGATGCTCACAACATGCAAACCCTTATCAAATTGTAAACTTCATATTTGTGTTGAGCACCAGGGTGTaGCCTGCCGCCAGGCACGCT | + |
Preference number: 5 (lower is better) Translates to: FRCSQHANPYQIVNFIFVLSTRV*PAARHA Trigger: AGCGTGCCTGGCGGCAGGCAACACCCTGGTGCTCAA...CACAAATATGAAGTTTACAATTTGATAAGGGTTTGCATGTTGTGAGCATCGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
||
CDS-3UTR CAA 90 bp | ATCAGTTCTGTGCTCAGGAATTCCCCTTTGTCTGGTTGCATGTCAGTGGTGATATCAATCACAGGGGTGTaGCTTAAAATTCGAGCCCAG | + |
Preference number: 5 (lower is better) Translates to: ISSVLRNSPLSGCMSVVISITGV*LKIRAQ Trigger: CTGGGCTCGAATTTTAAGCAACACCCCTGTGATTGA...TATCACCACTGACATGCAACCAGACAAAGGGGAATTCCTGAGCACAGAACTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR CAA 90 bp | GTCAATAAACTCTTTCCTCTCAGCTTTGTGTCAGTAAAGTTCTTGGGCTTAAGTGTCACCATCTGTCCATaGATCTCTGCCCAGGCTCCA | + |
Preference number: 5 (lower is better) Translates to: VNKLFPLSFVSVKFLGLSVTICP*ISAQAP Trigger: TGGAGCCTGGGCAGAGATCAATGGACAGATGGTGAC...ACTTAAGCCCAAGAACTTTACTGACACAAAGCTGAGAGGAAAGAGTTTATTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR CAA 90 bp | CTCAGAAGCTGCCTGTCTGTCACAGTGGGTTACAAAATAGTCAAAGGCACAAAGCAGTTCTCTCCTTTATaGAAAAACACTGCGCCCATG | + |
Preference number: 5 (lower is better) Translates to: LRSCLSVTVGYKIVKGTKQFSPL*KNTAPM Trigger: CATGGGCGCAGTGTTTTTCAATAAAGGAGAGAACTG...CTTTGTGCCTTTGACTATTTTGTAACCCACTGTGACAGACAGGCAGCTTCTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CCA 90 bp | CATCCGTACAGCCTTTTCAAGGTCACAATCACTGAATATTATCAGTaGGGATTTGCCACCAAGCTCAAGGGAAACTTTCTTCAGGTTGCT | + |
Preference number: 5 (lower is better) Translates to: HPYSLFKVTITEYYQ*GFATKLKGNFLQVA Trigger: AGCAACCTGAAGAAAGTTTCCCTTGAGCTTGGTGGCAAATCCCCACTGATAATATTCAGTGATTGTGACCTTGAAAAGGCTGTACGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | CTCAGAAGCTGCCTGTCTGTCACAGTGGGTTACAAAATAGTCAAAGGCACAAAGTCTCCGCACAACCTTTaGGATGAAATCTCCAAACTT | + |
Preference number: 5 (lower is better) Translates to: LRSCLSVTVGYKIVKGTKSPHNL*DEISKL Trigger: AAGTTTGGAGATTTCATCCAAAAGGTTGTGCGGAGA...CTTTGTGCCTTTGACTATTTTGTAACCCACTGTGACAGACAGGCAGCTTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | AACCCTCTTCTTGGTTCTAGTATCTACTTTGTGGCTTCCAGACGGCCCCTCCTTATCGATGTCCCCATTTaGGAATTTAGAAATGACCAT | + |
Preference number: 5 (lower is better) Translates to: NPLLGSSIYFVASRRPLLIDVPI*EFRNDH Trigger: ATGGTCATTTCTAAATTCCAAAATGGGGACATCGAT...AAGGAGGGGCCGTCTGGAAGCCACAAAGTAGATACTAGAACCAAGAAGAGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | CTCAGAAGCTGCCTGTCTGTCACAGTGGGTTACAAAATAGTCAAAGGCACAAAGTTTTCCAAAGCCAGATaGCTTCATTCCACCAAATGG | + |
Preference number: 5 (lower is better) Translates to: LRSCLSVTVGYKIVKGTKFSKAR*LHSTKW Trigger: CCATTTGGTGGAATGAAGCAATCTGGCTTTGGAAAA...CTTTGTGCCTTTGACTATTTTGTAACCCACTGTGACAGACAGGCAGCTTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | GAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGAATTTTCCAAAGCCAGATaGCTTCATTCCACCAAATGG | + |
Preference number: 5 (lower is better) Translates to: EKGRRQVSHSLQDKLVFEFSKAR*LHSTKW Trigger: CCATTTGGTGGAATGAAGCAATCTGGCTTTGGAAAA...TTCAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | AAACAGAATGTGTTTCTAGCAAATTCTAACCTGTGGACTTACCACCATTCTTGTCTTTTCATGATCTGTTaGCCCACTGAGGTGGATCCA | + |
Preference number: 5 (lower is better) Translates to: KQNVFLANSNLWTYHHSCLFMIC*PTEVDP Trigger: TGGATCCACCTCAGTGGGCAAACAGATCATGAAAAG...ACAAGAATGGTGGTAAGTCCACAGGTTAGAATTTGCTAGAAACACATTCTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR CAA 90 bp | AGGAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGATCGATGTCCCCATTTaGGAATTTAGAAATGACCAT | + |
Preference number: 5 (lower is better) Translates to: RRKEEDRCHILCRINWCLIDVPI*EFRNDH Trigger: ATGGTCATTTCTAAATTCCAAAATGGGGACATCGAT...CAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | AGGAGAAAGGAAGAAGACAGGTGTCACATTCTCTGCAGGATAAACTGGTGTTTGTCGAGTGTCACTGTTTaGATTTTCAGGTATTCATTC | + |
Preference number: 5 (lower is better) Translates to: RRKEEDRCHILCRINWCLSSVTV*IFRYSF Trigger: GAATGAATACCTGAAAATCAAAACAGTGACACTCGA...CAAACACCAGTTTATCCTGCAGAGAATGTGACACCTGTCTTCTTCCTTTCTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS-3UTR CAA 90 bp | TTCCGATGCTCACAACATGCAAACCCTTATCAAATTGTAAACTTCATATTTGTGGCTTCTGCTACCTCCTaGATGGTTTTACCCTTGAGT | + |
Preference number: 5 (lower is better) Translates to: FRCSQHANPYQIVNFIFVASATS*MVLPLS Trigger: ACTCAAGGGTAAAACCATCAAGGAGGTAGCAGAAGC...CACAAATATGAAGTTTACAATTTGATAAGGGTTTGCATGTTGTGAGCATCGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS-3UTR CAA 90 bp | TTCCGATGCTCACAACATGCAAACCCTTATCAAATTGTAAACTTCATATTTGTGCATATTCAGTGTTATTaGCTCTCTGCAACACCCCAT | + |
Preference number: 5 (lower is better) Translates to: FRCSQHANPYQIVNFIFVHIQCY*LSATPH Trigger: ATGGGGTGTTGCAGAGAGCAAATAACACTGAATATG...CACAAATATGAAGTTTACAATTTGATAAGGGTTTGCATGTTGTGAGCATCGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020497.14 |
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CDS CAA 72 bp | AAGGGTGTGACCTGTGCAGGCTTGAGCACCAGGGTGTaGCCTGCCGCCAGGCACGCTGCGCTCTTCCAGGCC | + |
Preference number: 6 (lower is better) Translates to: KGVTCAGLSTRV*PAARHAALFQA Trigger: GGCCTGGAAGAGCGCAGCGTGCCTGGCGGCAGGCAACACCCTGGTGCTCAAGCCTGCACAGGTCACACCCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CAA 90 bp | AGAGCCGTCAAGGGTGTGACCTGTGCAGGCTTGAGCACCAGGGTGTaGCCTGCCGCCAGGCACGCTGCGCTCTTCCAGGCCAGCATCATC | + |
Preference number: 6 (lower is better) Translates to: RAVKGVTCAGLSTRV*PAARHAALFQASII Trigger: GATGATGCTGGCCTGGAAGAGCGCAGCGTGCCTGGCGGCAGGCAACACCCTGGTGCTCAAGCCTGCACAGGTCACACCCTTGACGGCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CAA 90 bp | AGCTCTGCAAACTTCAGAGCCGTCAAGGGTGTGACCTGTGCAGGCTaGAGCACCAGGGTGTTGCCTGCCGCCAGGCACGCTGCGCTCTTC | + |
Preference number: 6 (lower is better) Translates to: SSANFRAVKGVTCAG*STRVLPAARHAALF Trigger: GAAGAGCGCAGCGTGCCTGGCGGCAGGCAACACCCTGGTGCTCAAGCCTGCACAGGTCACACCCTTGACGGCTCTGAAGTTTGCAGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS GCA 72 bp | GTGAACACAGTGGGTTCCATGAAGAAGCCTGGCCTCTaGACCTGTCTTCCTCCATACACCAGTGTGGCCCCC | + |
Preference number: 6 (lower is better) Translates to: VNTVGSMKKPGL*TCLPPYTSVAP Trigger: GGGGGCCACACTGGTGTATGGAGGAAGACAGGTGCAGAGGCCAGGCTTCTTCATGGAACCCACTGTGTTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS TCA 72 bp | TGCCACCTTCAGCTCCTCGGCCGTAAGTTCTACCACTaGTGTCTCACCCGCAGAAAAGTACTGGGAGGCTGG | + |
Preference number: 6 (lower is better) Translates to: CHLQLLGRKFYH*CLTRRKVLGGW Trigger: CCAGCCTCCCAGTACTTTTCTGCGGGTGAGACATCAGTGGTAGAACTTACGGCCGAGGAGCTGAAGGTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CCA 72 bp | TACTGCAGCAGCTTTTCCAAGTGCGCTCTGTGGTTCTaGGGCCCATGGTCCGTAGATCTGTCCAGGGGATCT | + |
Preference number: 6 (lower is better) Translates to: YCSSFSKCALWF*GPWSVDLSRGS Trigger: AGATCCCCTGGACAGATCTACGGACCATGGGCCCCAGAACCACAGAGCGCACTTGGAAAAGCTGCTGCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CCA 72 bp | TCACAGTACTGCAGCAGCTTTTCCAAGTGCGCTCTGTaGTTCTGGGGCCCATGGTCCGTAGATCTGTCCAGG | + |
Preference number: 6 (lower is better) Translates to: SQYCSSFSKCAL*FWGPWSVDLSR Trigger: CCTGGACAGATCTACGGACCATGGGCCCCAGAACCACAGAGCGCACTTGGAAAAGCTGCTGCAGTACTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CCA 72 bp | TCTCTTCCACCACTCTGGTTACGAATTCGTCGTGGATaGCCTCTTCCACAAACAGCCGCCCAGCTGCAATGC | + |
Preference number: 6 (lower is better) Translates to: SLPPLWLRIRRG*PLPQTAAQLQC Trigger: GCATTGCAGCTGGGCGGCTGTTTGTGGAAGAGGCCATCCACGACGAATTCGTAACCAGAGTGGTGGAAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CCA 72 bp | CACGCCTGTGAACACAGTGGGTTCCATGAAGAAGCCTaGCCTCTGCACCTGTCTTCCTCCATACACCAGTGT | + |
Preference number: 6 (lower is better) Translates to: HACEHSGFHEEA*PLHLSSSIHQC Trigger: ACACTGGTGTATGGAGGAAGACAGGTGCAGAGGCCAGGCTTCTTCATGGAACCCACTGTGTTCACAGGCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CCA 72 bp | TTCTGGATGCCTTCATATGTTGCCCCCTCTTCTGGCTaGGGAGTGCGAGGCGCTTTTCCATCAGCTATGAGT | + |
Preference number: 6 (lower is better) Translates to: FWMPSYVAPSSG*GVRGAFPSAMS Trigger: ACTCATAGCTGATGGAAAAGCGCCTCGCACTCCCCAGCCAGAAGAGGGGGCAACATATGAAGGCATCCAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CCA 72 bp | GGGTGTAGACAGCCCCGGAATCCAGCGCTTCTATGGTaGCCAGCTCTTCTTGGTTTTCTTCCATTAGGTCAG | + |
Preference number: 6 (lower is better) Translates to: GCRQPRNPALLW*PALLGFLPLGQ Trigger: CTGACCTAATGGAAGAAAACCAAGAAGAGCTGGCCACCATAGAAGCGCTGGATTCCGGGGCTGTCTACACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CAA 72 bp | AGGACAAGGCCATTTTTGGTGACAAGACCGGGCTTCTaGGCACCTCTAATGTCCAGTGGTTCTCCAGAAGGC | + |
Preference number: 6 (lower is better) Translates to: RTRPFLVTRPGF*APLMSSGSPEG Trigger: GCCTTCTGGAGAACCACTGGACATTAGAGGTGCCAAGAAGCCCGGTCTTGTCACCAAAAATGGCCTTGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS TCA 72 bp | ACCGGTTATAAAGCGAGTCCACTGTGTCATTGGGCTTaGCGTCACACGATCTCTGAAGAAGGATGGGTCCTG | + |
Preference number: 6 (lower is better) Translates to: TGYKASPLCHWA*RHTISEEGWVL Trigger: CAGGACCCATCCTTCTTCAGAGATCGTGTGACGTCAAGCCCAATGACACAGTGGACTCGCTTTATAACCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS TCA 72 bp | CTTGGTTTTCTTCCATTAGGTCAGCGAGTCTGTACATaGGTCTTCCTCTGTCTCTGGCGTTCATCCTCCCCC | + |
Preference number: 6 (lower is better) Translates to: LGFLPLGQRVCT*VFLCLWRSSSP Trigger: GGGGGAGGATGAACGCCAGAGACAGAGGAAGACTCATGTACAGACTCGCTGACCTAATGGAAGAAAACCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CCA 72 bp | GGTAGGGGATTTTCACTGTCATCCCGTTCACCTCCTTaGAAACGTAATCCACCACCATCTCTGCCTCTTCGT | + |
Preference number: 6 (lower is better) Translates to: GRGFSLSSRSPP*KRNPPPSLPLR Trigger: ACGAAGAGGCAGAGATGGTGGTGGATTACGTTTCCAAGGAGGTGAACGGGATGACAGTGAAAATCCCCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS TCA 72 bp | CTGTCTGATCTCTTCCACCAGCCTCACAACATCCATTaGGCTCGCTCCAGATTTAAAGAAGTCCGTGGAGTC | + |
Preference number: 6 (lower is better) Translates to: LSDLFHQPHNIH*ARSRFKEVRGV Trigger: GACTCCACGGACTTCTTTAAATCTGGAGCGAGCTCAATGGATGTTGTGAGGCTGGTGGAAGAGATCAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS TCA 72 bp | CGTCCTCTCCTCTCAGTCTCCGCACAACCTTTTGGATaGAATCTCCAAACTTGGTGGCCATGTAGACGTCTT | + |
Preference number: 6 (lower is better) Translates to: RPLLSVSAQPFG*NLQTWWPCRRL Trigger: AAGACGTCTACATGGCCACCAAGTTTGGAGATTTCATCCAAAAGGTTGTGCGGAGACTGAGAGGAGAGGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CAA 90 bp | TTCCCAAAAAGGACAAGGCCATTTTTGGTGACAAGACCGGGCTTCTaGGCACCTCTAATGTCCAGTGGTTCTCCAGAAGGCACAGAACTA | + |
Preference number: 6 (lower is better) Translates to: FPKRTRPFLVTRPGF*APLMSSGSPEGTEL Trigger: TAGTTCTGTGCCTTCTGGAGAACCACTGGACATTAGAGGTGCCAAGAAGCCCGGTCTTGTCACCAAAAATGGCCTTGTCCTTTTTGGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CAA 90 bp | GCTCCAGATTTAAAGAAGTCCGTGGAGTCCTCAATCACAGGGGTGTaGCTTAAAATTCGAGCCCAGATGACCTTAATGGTCTCTGCCACC | + |
Preference number: 6 (lower is better) Translates to: APDLKKSVESSITGV*LKIRAQMTLMVSAT Trigger: GGTGGCAGAGACCATTAAGGTCATCTGGGCTCGAATTTTAAGCAACACCCCTGTGATTGAGGACTCCACGGACTTCTTTAAATCTGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CAA 90 bp | CATCTCTGCCTCTTCGTCCTCTCCTCTCAGTCTCCGCACAACCTTTaGGATGAAATCTCCAAACTTGGTGGCCATGTAGACGTCTTCATT | + |
Preference number: 6 (lower is better) Translates to: HLCLFVLSSQSPHNL*DEISKLGGHVDVFI Trigger: AATGAAGACGTCTACATGGCCACCAAGTTTGGAGATTTCATCCAAAAGGTTGTGCGGAGACTGAGAGGAGAGGACGAAGAGGCAGAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CAA 90 bp | ATCAGTGGGGATTTGCCACCAAGCTCAAGGGAAACTTTCTTCAGGTaGCTCACAGCACAGCTTTTCATGATCTGTTTGCCCACTGAGGTG | + |
Preference number: 6 (lower is better) Translates to: ISGDLPPSSRETFFR*LTAQLFMICLPTEV Trigger: CACCTCAGTGGGCAAACAGATCATGAAAAGCTGTGCTGTGAGCAACCTGAAGAAAGTTTCCCTTGAGCTTGGTGGCAAATCCCCACTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS TCA 72 bp | TCCACTGTGTCATTGGGCTTGACGTCACACGATCTCTaGAGAAGGATGGGTCCTGTATCCAAACCATCATCT | + |
Preference number: 6 (lower is better) Translates to: STVSLGLTSHDL*RRMGPVSKPSS Trigger: AGATGATGGTTTGGATACAGGACCCATCCTTCTTCAGAGATCGTGTGACGTCAAGCCCAATGACACAGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CAA 72 bp | GATTTGCCACCAAGCTCAAGGGAAACTTTCTTCAGGTaGCTCACAGCACAGCTTTTCATGATCTGTTTGCCC | + |
Preference number: 6 (lower is better) Translates to: DLPPSSRETFFR*LTAQLFMICLP Trigger: GGGCAAACAGATCATGAAAAGCTGTGCTGTGAGCAACCTGAAGAAAGTTTCCCTTGAGCTTGGTGGCAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS TCA 72 bp | TGCCCATCCGTACAGCCTTTTCAAGGTCACAATCACTaGATATTATCAGTGGGGATTTGCCACCAAGCTCAA | + |
Preference number: 6 (lower is better) Translates to: CPSVQPFQGHNH*ILSVGICHQAQ Trigger: TTGAGCTTGGTGGCAAATCCCCACTGATAATATTCAGTGATTGTGACCTTGAAAAGGCTGTACGGATGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CAA 72 bp | TTAAAGAAGTCCGTGGAGTCCTCAATCACAGGGGTGTaGCTTAAAATTCGAGCCCAGATGACCTTAATGGTC | + |
Preference number: 6 (lower is better) Translates to: LKKSVESSITGV*LKIRAQMTLMV Trigger: GACCATTAAGGTCATCTGGGCTCGAATTTTAAGCAACACCCCTGTGATTGAGGACTCCACGGACTTCTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CAA 90 bp | ACAGCCTTTTCAAGGTCACAATCACTGAATATTATCAGTGGGGATTaGCCACCAAGCTCAAGGGAAACTTTCTTCAGGTTGCTCACAGCA | + |
Preference number: 6 (lower is better) Translates to: TAFSRSQSLNIISGD*PPSSRETFFRLLTA Trigger: TGCTGTGAGCAACCTGAAGAAAGTTTCCCTTGAGCTTGGTGGCAAATCCCCACTGATAATATTCAGTGATTGTGACCTTGAAAAGGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |
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CDS CAA 72 bp | TCAAGGTCACAATCACTGAATATTATCAGTGGGGATTaGCCACCAAGCTCAAGGGAAACTTTCTTCAGGTTG | + |
Preference number: 6 (lower is better) Translates to: SRSQSLNIISGD*PPSSRETFFRL Trigger: CAACCTGAAGAAAGTTTCCCTTGAGCTTGGTGGCAAATCCCCACTGATAATATTCAGTGATTGTGACCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020497.14 ENSMUST00000146640.8 |