Pregenerated sensors for ALDH1L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030088Ensembl transcript IDs: ENSMUST00000032175.11, ENSMUST00000130418.8, ENSMUST00000203111.2, ENSMUST00000204796.3
Found 374 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | ACGGCACCTGCGTCCAGGGCCTCAATGGTGGCTAGCTCTTCCTGGTaGTGCTCCATGAGGTCCGCCAACCTGTACAGGAGCCGGCCCCGG | + |
Preference number: 1 (lower is better) Translates to: TAPASRASMVASSSW*CSMRSANLYRSRPR Trigger: CCGGGGCCGGCTCCTGTACAGGTTGGCGGACCTCATGGAGCAGCACCAGGAAGAGCTAGCCACCATTGAGGCCCTGGACGCAGGTGCCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR GCA 90 bp | GCACCTGCGTCCAGGGCCTCAATGGTGGCTAGCTCTTCCTGGTGCTaGTCCATGAGGTCCGCCAACCTGTACAGGAGCCGGCCCCGGTCA | + |
Preference number: 1 (lower is better) Translates to: APASRASMVASSSWC*SMRSANLYRSRPRS Trigger: TGACCGGGGCCGGCTCCTGTACAGGTTGGCGGACCTCATGGAGCAGCACCAGGAAGAGCTAGCCACCATTGAGGCCCTGGACGCAGGTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR TCA 90 bp | GGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTaGAAGGAGCAGTGCTGGGGACAGGAGGGTGCTAAGTCACCAGAC | + |
Preference number: 1 (lower is better) Translates to: GVLSPAGVQAKSSSS*KEQCWGQEGAKSPD Trigger: GTCTGGTGACTTAGCACCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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3UTR TCA 90 bp | CCCTGCTGTAGACCCCAGGCTACCATTGTGGCTGTCCAAGTCCACTaGGTGAGAACCCGGGTCCTGGCAGAGGAGACTGGGGTGCTTGAT | + |
Preference number: 1 (lower is better) Translates to: PCCRPQATIVAVQVH*VRTRVLAEETGVLD Trigger: ATCAAGCACCCCAGTCTCCTCTGCCAGGACCCGGGTTCTCACTCAGTGGACTTGGACAGCCACAATGGTAGCCTGGGGTCTACAGCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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3UTR CCA 90 bp | CCTTCCTTCACACCACGTTGGCAATACTCCACCAGCTTCCTCAGGTaGGCCTCATGGTTCTGCGGGCCATGGTTGGTATCTCTGTCCAGG | + |
Preference number: 1 (lower is better) Translates to: PSFTPRWQYSTSFLR*ASWFCGPWLVSLSR Trigger: CCTGGACAGAGATACCAACCATGGCCCGCAGAACCATGAGGCCCACCTGAGGAAGCTGGTGGAGTATTGCCAACGTGGTGTGAAGGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR CCA 90 bp | TACTCCACCAGCTTCCTCAGGTGGGCCTCATGGTTCTGCGGGCCATaGTTGGTATCTCTGTCCAGGGGGTTGCCGATTTTCATCTTCCCT | + |
Preference number: 1 (lower is better) Translates to: YSTSFLRWASWFCGP*LVSLSRGLPIFIFP Trigger: AGGGAAGATGAAAATCGGCAACCCCCTGGACAGAGATACCAACCATGGCCCGCAGAACCATGAGGCCCACCTGAGGAAGCTGGTGGAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR CCA 90 bp | TCTTCCCTACTTCCTCCACCACTTTCTGCACAAACTGGTCATGGATaGAGTCCTCCACAAAGAGCCGGCCTGCCGCAATGCAGTTCTCCC | + |
Preference number: 1 (lower is better) Translates to: SSLLPPPLSAQTGHG*SPPQRAGLPQCSSP Trigger: GGGAGAACTGCATTGCGGCAGGCCGGCTCTTTGTGGAGGACTCCATCCATGACCAGTTTGTGCAGAAAGTGGTGGAGGAAGTAGGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR TCA 90 bp | GGCAATAGCAAATCTGTTGAGATGTGGTATGTGGGACCTCCAGAATaGAGAAGGTACAGAGGAGAGGGCCTTGGGCACCCACGGGTGAGT | + |
Preference number: 1 (lower is better) Translates to: GNSKSVEMWYVGPPE*RRYRGEGLGHPRVS Trigger: ACTCACCCGTGGGTGCCCAAGGCCCTCTCCTCTGTACCTTCTTCATTCTGGAGGTCCCACATACCACATCTCAACAGATTTGCTATTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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3UTR TCA 90 bp | TACTGTAGGTCTTCGCGCCCTCAGCATCCACAAACTCGCCGCCTATaGAGAGCTGGTAGGGCATTTGGAGAGTCAGTTTCTTCACTGCCT | + |
Preference number: 1 (lower is better) Translates to: YCRSSRPQHPQTRRL*RAGRAFGESVSSLP Trigger: AGGCAGTGAAGAAACTGACTCTCCAAATGCCCTACCAGCTCTTCATAGGCGGCGAGTTTGTGGATGCTGAGGGCGCGAAGACCTACAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR TCA 90 bp | TTAGCGATGTACATGTGGTCCTCCACGTCTGTGAAAACGGTTGGCTaGAAGAAGAAGCCTGGCCTTGGGACTTGGTTCCCACCACAGACC | + |
Preference number: 1 (lower is better) Translates to: LAMYMWSSTSVKTVG*KKKPGLGTWFPPQT Trigger: GGTCTGTGGTGGGAACCAAGTCCCAAGGCCAGGCTTCTTCTTTCAGCCAACCGTTTTCACAGACGTGGAGGACCACATGTACATCGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR GCA 90 bp | AGGGGGTTGCCGATTTTCATCTTCCCTACTTCCTCCACCACTTTCTaGACAAACTGGTCATGGATGGAGTCCTCCACAAAGAGCCGGCCT | + |
Preference number: 1 (lower is better) Translates to: RGLPIFIFPTSSTTF*TNWSWMESSTKSRP Trigger: AGGCCGGCTCTTTGTGGAGGACTCCATCCATGACCAGTTTGTGCAGAAAGTGGTGGAGGAAGTAGGGAAGATGAAAATCGGCAACCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR CCA 90 bp | CCGATTTTCATCTTCCCTACTTCCTCCACCACTTTCTGCACAAACTaGTCATGGATGGAGTCCTCCACAAAGAGCCGGCCTGCCGCAATG | + |
Preference number: 1 (lower is better) Translates to: PIFIFPTSSTTFCTN*SWMESSTKSRPAAM Trigger: CATTGCGGCAGGCCGGCTCTTTGTGGAGGACTCCATCCATGACCAGTTTGTGCAGAAAGTGGTGGAGGAAGTAGGGAAGATGAAAATCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR CCA 90 bp | CTCCTTAGCGATGTACATGTGGTCCTCCACGTCTGTGAAAACGGTTaGCTGAAAGAAGAAGCCTGGCCTTGGGACTTGGTTCCCACCACA | + |
Preference number: 1 (lower is better) Translates to: LLSDVHVVLHVCENG*LKEEAWPWDLVPTT Trigger: TGTGGTGGGAACCAAGTCCCAAGGCCAGGCTTCTTCTTTCAGCCAACCGTTTTCACAGACGTGGAGGACCACATGTACATCGCTAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR TCA 90 bp | GAGAAGTATCACAGTCTTGGCTTCAGTACTCAAAAGTCACAGTCTTaGTCCGCAGGTACTCATTCAGGGCCGCCTCTCCCAGGTCTTTGC | + |
Preference number: 1 (lower is better) Translates to: EKYHSLGFSTQKSQS*SAGTHSGPPLPGLC Trigger: GCAAAGACCTGGGAGAGGCGGCCCTGAATGAGTACCTGCGGATCAAGACTGTGACTTTTGAGTACTGAAGCCAAGACTGTGATACTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR GCA 90 bp | GCCTATGAAGAGCTGGTAGGGCATTTGGAGAGTCAGTTTCTTCACTaGCTTTTCCACGTAGTTAATGACACACTCGCTCTCGCCGTCCTC | + |
Preference number: 1 (lower is better) Translates to: AYEELVGHLESQFLH*LFHVVNDTLALAVL Trigger: GAGGACGGCGAGAGCGAGTGTGTCATTAACTACGTGGAAAAGGCAGTGAAGAAACTGACTCTCCAAATGCCCTACCAGCTCTTCATAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR-3UTR TCA 90 bp | GGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTaGAAGGAGCAGTGCTGGGGA | + |
Preference number: 2 (lower is better) Translates to: GATSDCSEGVLSPAGVQAKSSSS*KEQCWG Trigger: TCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTT...GGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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3UTR-3UTR GCA 90 bp | CTGAAATCTTTGCGACTGATCCAGGTCACTGCCTGCCTGGCCAGGGGAGTTAGAGCCTTGCAGGGGCTGTaGTCCAGGCTGGGGTGGTGT | + |
Preference number: 2 (lower is better) Translates to: LKSLRLIQVTACLARGVRALQGL*SRLGWC Trigger: ACACCACCCCAGCCTGGAGCACAGCCCCTGCAAGGC...TCTAACTCCCCTGGCCAGGCAGGCAGTGACCTGGATCAGTCGCAAAGATTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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3UTR-3UTR TCA 90 bp | GTGGCCCCTTCCTTCACACCACGTTGGCAATACTCCACCAGCTTCCTCAGGTGGAAGAGCTCCAGCAGCTaGAAGGAGCAGTGCTGGGGA | + |
Preference number: 2 (lower is better) Translates to: VAPSFTPRWQYSTSFLRWKSSSS*KEQCWG Trigger: TCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTT...CCACCTGAGGAAGCTGGTGGAGTATTGCCAACGTGGTGTGAAGGAAGGGGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR-3UTR TCA 90 bp | CAGGGAAATGTCAGGCTGGGTGGAGTCCCTGCTGTAGACCCCAGGCTACCATTGGCTCAGGACTCATGGTaGCCACTGCCTCTGGTTCCA | + |
Preference number: 2 (lower is better) Translates to: QGNVRLGGVPAVDPRLPLAQDSW*PLPLVP Trigger: TGGAACCAGAGGCAGTGGTCACCATGAGTCCTGAGC...CAATGGTAGCCTGGGGTCTACAGCAGGGACTCCACCCAGCCTGACATTTCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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3UTR-3UTR CCA 90 bp | TGGCCCCTTCCTTCACACCACGTTGGCAATACTCCACCAGCTTCCTCAGGTGGGCCAGGGCCTCAATGGTaGCTAGCTCTTCCTGGTGCT | + |
Preference number: 2 (lower is better) Translates to: WPLPSHHVGNTPPASSGGPGPQW*LALPGA Trigger: AGCACCAGGAAGAGCTAGCCACCATTGAGGCCCTGG...CCCACCTGAGGAAGCTGGTGGAGTATTGCCAACGTGGTGTGAAGGAAGGGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR-3UTR GCA 90 bp | CTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGAGAGAAGGGCAGGGATaGGGAGGAAGTCCGGGATAC | + |
Preference number: 2 (lower is better) Translates to: LHLEPLLIVQRVSCHQQGREGQG*GGSPGY Trigger: GTATCCCGGACTTCCTCCGCATCCCTGCCCTTCTCT...CCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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3UTR-3UTR GCA 90 bp | TGGCCCCTTCCTTCACACCACGTTGGCAATACTCCACCAGCTTCCTCAGGTGGGAGGTCTGGATGGACATaGCCACATGCGTCTTCAGGG | + |
Preference number: 2 (lower is better) Translates to: WPLPSHHVGNTPPASSGGRSGWT*PHASSG Trigger: CCCTGAAGACGCATGTGGGCATGTCCATCCAGACCT...CCCACCTGAGGAAGCTGGTGGAGTATTGCCAACGTGGTGTGAAGGAAGGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR-3UTR CCA 90 bp | GGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCTTCCTCACTAGGAGCTaGATGAAGTCCCCGAAGGTG | + |
Preference number: 2 (lower is better) Translates to: GATSDCSEGVLSPAGVQAFLTRS*MKSPKV Trigger: CACCTTCGGGGACTTCATCCAGCTCCTAGTGAGGAA...GGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR CAA 90 bp | TCCACCAGCTTCCTCAGGTGGGCCTCATGGTTCTGCGGGCCATGGTaGGTATCTCTGTCCAGGGGGTTGCCGATTTTCATCTTCCCTACT | + |
Preference number: 2 (lower is better) Translates to: STSFLRWASWFCGPW*VSLSRGLPIFIFPT Trigger: AGTAGGGAAGATGAAAATCGGCAACCCCCTGGACAGAGATACCAACCATGGCCCGCAGAACCATGAGGCCCACCTGAGGAAGCTGGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR CAA 90 bp | TCTGGGGCGCACCCTCTTCCACAGCCTCTTGTACCCATTCTGCTTTaGGAGGTGTGTGATGTGCATTTCCTCCTGTGTCCCACTAAGGGG | + |
Preference number: 2 (lower is better) Translates to: SGAHPLPQPLVPILL*EVCDVHFLLCPTKG Trigger: CCCCTTAGTGGGACACAGGAGGAAATGCACATCACACACCTCCAAAAGCAGAATGGGTACAAGAGGCTGTGGAAGAGGGTGCGCCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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3UTR-3UTR TCA 90 bp | TTACTCAGGGCACAGCTTTTCATGATGTGTTTTCCCACCTCCGTGGAGCCTGTGCCTGGTGCTGCTCCATaGGGTCCGCCAACCTGTACA | + |
Preference number: 2 (lower is better) Translates to: LLRAQLFMMCFPTSVEPVPGAAP*GPPTCT Trigger: TGTACAGGTTGGCGGACCTCATGGAGCAGCACCAGG...CACAGGCTCCACGGAGGTGGGAAAACACATCATGAAAAGCTGTGCCCTGAGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR CAA 90 bp | GAGTCCTCCACAAAGAGCCGGCCTGCCGCAATGCAGTTCTCCCCTTaGTTGAAGAAAACGGAGCTCATGCCCATCTGCACAGCTTTGTTG | + |
Preference number: 2 (lower is better) Translates to: ESSTKSRPAAMQFSP*LKKTELMPICTALL Trigger: CAACAAAGCTGTGCAGATGGGCATGAGCTCCGTTTTCTTCAACAAAGGGGAGAACTGCATTGCGGCAGGCCGGCTCTTTGTGGAGGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR CAA 90 bp | GCCTCATGGTTCTGCGGGCCATGGTTGGTATCTCTGTCCAGGGGGTaGCCGATTTTCATCTTCCCTACTTCCTCCACCACTTTCTGCACA | + |
Preference number: 2 (lower is better) Translates to: ASWFCGPWLVSLSRG*PIFIFPTSSTTFCT Trigger: TGTGCAGAAAGTGGTGGAGGAAGTAGGGAAGATGAAAATCGGCAACCCCCTGGACAGAGATACCAACCATGGCCCGCAGAACCATGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR CAA 90 bp | ATATCCCGAGTGAAGACACCAGAGGCCAGGCCAAATTCTGTAGCATaGGCCCGAGATAGCACTGCATCCACGTCCCCATCAGCAAACCGA | + |
Preference number: 2 (lower is better) Translates to: ISRVKTPEARPNSVA*ARDSTASTSPSANR Trigger: TCGGTTTGCTGATGGGGACGTGGATGCAGTGCTATCTCGGGCCAATGCTACAGAATTTGGCCTGGCCTCTGGTGTCTTCACTCGGGATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR-3UTR TCA 90 bp | CTCCCCAAGTCTCATTTCCTGTTTCTGGGGCGCACCCTCTTCCACAGCCTCTTGTCTCTGAAGGCCAAGTaGTGCTACATGCTCAGGACT | + |
Preference number: 2 (lower is better) Translates to: LPKSHFLFLGRTLFHSLLSLKAK*CYMLRT Trigger: AGTCCTGAGCATGTAGCATCACTTGGCCTTCAGAGA...CAAGAGGCTGTGGAAGAGGGTGCGCCCCAGAAACAGGAAATGAGACTTGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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3UTR-3UTR CCA 90 bp | TCATCTTCCCTACTTCCTCCACCACTTTCTGCACAAACTGGTCATGGATGGAGTGTGAGTGGGGTCACCTaGGCAGGCTTGATCACCACG | + |
Preference number: 2 (lower is better) Translates to: SSSLLPPPLSAQTGHGWSVSGVT*AGLITT Trigger: CGTGGTGATCAAGCCTGCCCAGGTGACCCCACTCAC...ACTCCATCCATGACCAGTTTGTGCAGAAAGTGGTGGAGGAAGTAGGGAAGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR CAA 90 bp | AACACAGTGCCCGCCTGCAGTTTGTCACTGACATACAGGGCCTTGTaGATATCCCGAGTGAAGACACCAGAGGCCAGGCCAAATTCTGTA | + |
Preference number: 2 (lower is better) Translates to: NTVPACSLSLTYRAL*ISRVKTPEARPNSV Trigger: TACAGAATTTGGCCTGGCCTCTGGTGTCTTCACTCGGGATATCAACAAGGCCCTGTATGTCAGTGACAAACTGCAGGCGGGCACTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR CAA 90 bp | ACAAACACAGTGCCCGCCTGCAGTTTGTCACTGACATACAGGGCCTaGTTGATATCCCGAGTGAAGACACCAGAGGCCAGGCCAAATTCT | + |
Preference number: 2 (lower is better) Translates to: TNTVPACSLSLTYRA*LISRVKTPEARPNS Trigger: AGAATTTGGCCTGGCCTCTGGTGTCTTCACTCGGGATATCAACAAGGCCCTGTATGTCAGTGACAAACTGCAGGCGGGCACTGTGTTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR CAA 90 bp | CCAGACTGCTTGAATCCTCCAAAAGGTGCGGCCACATCGGTCTTGTaGTATGTGTTGACAAACACAGTGCCCGCCTGCAGTTTGTCACTG | + |
Preference number: 2 (lower is better) Translates to: PDCLNPPKGAATSVL*YVLTNTVPACSLSL Trigger: CAGTGACAAACTGCAGGCGGGCACTGTGTTTGTCAACACATACAACAAGACCGATGTGGCCGCACCTTTTGGAGGATTCAAGCAGTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR-3UTR TCA 90 bp | CCGAAGGACTCCTCCTTAGCGATGTACATGTGGTCCTCCACGTCTGTGAAAACGAAAGATGATAAGGGGTaGCTTTCCACCCAGCTCCAG | + |
Preference number: 2 (lower is better) Translates to: PKDSSLAMYMWSSTSVKTKDDKG*LSTQLQ Trigger: CTGGAGCTGGGTGGAAAGTCACCCCTTATCATCTTT...CGTTTTCACAGACGTGGAGGACCACATGTACATCGCTAAGGAGGAGTCCTTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR-3UTR GCA 90 bp | GCCTCTCCCAGGTCTTTGCCAAATCCAGACTGCTTGAATCCTCCAAAAGGTGCGGAGCTCATGCCCATCTaGACAGCTTTGTTGAGGTCA | + |
Preference number: 2 (lower is better) Translates to: ASPRSLPNPDCLNPPKGAELMPI*TALLRS Trigger: TGACCTCAACAAAGCTGTGCAGATGGGCATGAGCTC...CGCACCTTTTGGAGGATTCAAGCAGTCTGGATTTGGCAAAGACCTGGGAGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR CAA 90 bp | AAGTCTCATTTCCTGTTTCTGGGGCGCACCCTCTTCCACAGCCTCTaGTACCCATTCTGCTTTTGGAGGTGTGTGATGTGCATTTCCTCC | + |
Preference number: 2 (lower is better) Translates to: KSHFLFLGRTLFHSL*YPFCFWRCVMCISS Trigger: GGAGGAAATGCACATCACACACCTCCAAAAGCAGAATGGGTACAAGAGGCTGTGGAAGAGGGTGCGCCCCAGAAACAGGAAATGAGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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3UTR CAA 90 bp | GGAGAAGTATCACAGTCTTGGCTTCAGTACTCAAAAGTCACAGTCTaGATCCGCAGGTACTCATTCAGGGCCGCCTCTCCCAGGTCTTTG | + |
Preference number: 2 (lower is better) Translates to: GEVSQSWLQYSKVTV*IRRYSFRAASPRSL Trigger: CAAAGACCTGGGAGAGGCGGCCCTGAATGAGTACCTGCGGATCAAGACTGTGACTTTTGAGTACTGAAGCCAAGACTGTGATACTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR-3UTR CCA 90 bp | CCACCCAGTTTCCTATTCCAACAGCCATGTGGTGGGGTTTACACGGCCCCATCAGCCTTTAAAGAATTTTaGACCAAGAGAGGCAGAGCC | + |
Preference number: 2 (lower is better) Translates to: PPSFLFQQPCGGVYTAPSAFKEF*TKRGRA Trigger: GGCTCTGCCTCTCTTGGTCCAAAATTCTTTAAAGGC...TGATGGGGCCGTGTAAACCCCACCACATGGCTGTTGGAATAGGAAACTGGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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3UTR CAA 90 bp | CTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTaGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAG | + |
Preference number: 2 (lower is better) Translates to: LLTIFIHGGHDCSLH*EPLLIVQRVSCHQQ Trigger: CTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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3UTR CAA 90 bp | CAGCACTCCCTGAGGTCAACAGGGTACAGGAGAAGTATCACAGTCTaGGCTTCAGTACTCAAAAGTCACAGTCTTGATCCGCAGGTACTC | + |
Preference number: 2 (lower is better) Translates to: QHSLRSTGYRRSITV*ASVLKSHSLDPQVL Trigger: GAGTACCTGCGGATCAAGACTGTGACTTTTGAGTACTGAAGCCAAGACTGTGATACTTCTCCTGTACCCTGTTGACCTCAGGGAGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR-3UTR GCA 90 bp | TACCCATTCTGCTTTTGGAGGTGTGTGATGTGCATTTCCTCCTGTGTCCCACTAACTCATGGTGACCACTaGCTCTGGTTCCATACGAGG | + |
Preference number: 2 (lower is better) Translates to: YPFCFWRCVMCISSCVPLTHGDH*LWFHTR Trigger: CCTCGTATGGAACCAGAGGCAGTGGTCACCATGAGT...TAGTGGGACACAGGAGGAAATGCACATCACACACCTCCAAAAGCAGAATGGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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3UTR CAA 90 bp | CTCAGCATCCACAAACTCGCCGCCTATGAAGAGCTGGTAGGGCATTaGGAGAGTCAGTTTCTTCACTGCCTTTTCCACGTAGTTAATGAC | + |
Preference number: 2 (lower is better) Translates to: LSIHKLAAYEELVGH*ESQFLHCLFHVVND Trigger: GTCATTAACTACGTGGAAAAGGCAGTGAAGAAACTGACTCTCCAAATGCCCTACCAGCTCTTCATAGGCGGCGAGTTTGTGGATGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR-3UTR GCA 90 bp | AAGAACAGAAAGGCCTTTAAAGAATTTTGGACCAAGAGAGGCAGAGCCAAAGAACAGAGGAGACTGGGGTaGTTGATGGCCCAAGGCTCA | + |
Preference number: 2 (lower is better) Translates to: KNRKAFKEFWTKRGRAKEQRRLG*LMAQGS Trigger: TGAGCCTTGGGCCATCAAGCACCCCAGTCTCCTCTG...TTCTTTGGCTCTGCCTCTCTTGGTCCAAAATTCTTTAAAGGCCTTTCTGTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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3UTR-3UTR GCA 90 bp | TTACTCAGGGCACAGCTTTTCATGATGTGTTTTCCCACCTCCGTGGAGCCTGTGAGTCAGTTTCTTCACTaGCTTTTCCACGTAGTTAAT | + |
Preference number: 2 (lower is better) Translates to: LLRAQLFMMCFPTSVEPVSQFLH*LFHVVN Trigger: ATTAACTACGTGGAAAAGGCAGTGAAGAAACTGACT...CACAGGCTCCACGGAGGTGGGAAAACACATCATGAAAAGCTGTGCCCTGAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR GCA 72 bp | GTACAGAGGAGAGGGCCTTGGGCACCCACGGGTGAGTaGATAGGAGTCAGAAGCCTTGCAGGGGCTGTGCTC | + |
Preference number: 3 (lower is better) Translates to: VQRRGPWAPTGE*IGVRSLAGAVL Trigger: GAGCACAGCCCCTGCAAGGCTTCTGACTCCTATGCACTCACCCGTGGGTGCCCAAGGCCCTCTCCTCTGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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3UTR GCA 72 bp | TCCAGGGCCTCAATGGTGGCTAGCTCTTCCTGGTGCTaGTCCATGAGGTCCGCCAACCTGTACAGGAGCCGG | + |
Preference number: 3 (lower is better) Translates to: SRASMVASSSWC*SMRSANLYRSR Trigger: CCGGCTCCTGTACAGGTTGGCGGACCTCATGGAGCAGCACCAGGAAGAGCTAGCCACCATTGAGGCCCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
||
3UTR GCA 72 bp | GCGTCCAGGGCCTCAATGGTGGCTAGCTCTTCCTGGTaGTGCTCCATGAGGTCCGCCAACCTGTACAGGAGC | + |
Preference number: 3 (lower is better) Translates to: ASRASMVASSSW*CSMRSANLYRS Trigger: GCTCCTGTACAGGTTGGCGGACCTCATGGAGCAGCACCAGGAAGAGCTAGCCACCATTGAGGCCCTGGACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
||
3UTR TCA 72 bp | AGACCCCAGGCTACCATTGTGGCTGTCCAAGTCCACTaGGTGAGAACCCGGGTCCTGGCAGAGGAGACTGGG | + |
Preference number: 3 (lower is better) Translates to: RPQATIVAVQVH*VRTRVLAEETG Trigger: CCCAGTCTCCTCTGCCAGGACCCGGGTTCTCACTCAGTGGACTTGGACAGCCACAATGGTAGCCTGGGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
||
3UTR TCA 72 bp | GAAGGTACAGAGGAGAGGGCCTTGGGCACCCACGGGTaGGTGCATAGGAGTCAGAAGCCTTGCAGGGGCTGT | + |
Preference number: 3 (lower is better) Translates to: EGTEERALGTHG*VHRSQKPCRGC Trigger: ACAGCCCCTGCAAGGCTTCTGACTCCTATGCACTCACCCGTGGGTGCCCAAGGCCCTCTCCTCTGTACCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
||
3UTR-3UTR CAA 90 bp | CCCCTTCCTTCACACCACGTTGGCAATACTCCACCAGCTTCCTCAGGTGGGCCTTTCTGCGGGCCATGGTaGGTATCTCTGTCCAGGGGG | + |
Preference number: 3 (lower is better) Translates to: PLPSHHVGNTPPASSGGPFCGPW*VSLSRG Trigger: CCCCCTGGACAGAGATACCAACCATGGCCCGCAGAA...AGGCCCACCTGAGGAAGCTGGTGGAGTATTGCCAACGTGGTGTGAAGGAAGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
||
3UTR-3UTR CAA 90 bp | CTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGGCCTGGCCTTGGGACTaGGTTCCCACCACAGACCAG | + |
Preference number: 3 (lower is better) Translates to: LHLEPLLIVQRVSCHQQGAWPWD*VPTTDQ Trigger: CTGGTCTGTGGTGGGAACCAAGTCCCAAGGCCAGGC...CCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
||
3UTR GCA 72 bp | TACTCCACCAGCTTCCTCAGGTGGGCCTCATGGTTCTaGGGGCCATGGTTGGTATCTCTGTCCAGGGGGTTG | + |
Preference number: 3 (lower is better) Translates to: YSTSFLRWASWF*GPWLVSLSRGL Trigger: CAACCCCCTGGACAGAGATACCAACCATGGCCCGCAGAACCATGAGGCCCACCTGAGGAAGCTGGTGGAGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
||
3UTR GCA 72 bp | CACACCCTTGGGAATGCCAGCCTTCAGTGTCAGCTCTaGAAACTTCAAGGCTGTGAGTGGGGTCACCTGGGC | + |
Preference number: 3 (lower is better) Translates to: HTLGNASLQCQL*KLQGCEWGHLG Trigger: GCCCAGGTGACCCCACTCACAGCCTTGAAGTTTGCAGAGCTGACACTGAAGGCTGGCATTCCCAAGGGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
||
3UTR GCA 72 bp | AGGGCCGCCTCTCCCAGGTCTTTGCCAAATCCAGACTaGTTGAATCCTCCAAAAGGTGCGGCCACATCGGTC | + |
Preference number: 3 (lower is better) Translates to: RAASPRSLPNPD*LNPPKGAATSV Trigger: GACCGATGTGGCCGCACCTTTTGGAGGATTCAAGCAGTCTGGATTTGGCAAAGACCTGGGAGAGGCGGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
||
3UTR CCA 72 bp | AGATGGGAGTGCTGTCCAGGGAAATGTCAGGCTGGGTaGAGTCCCTGCTGTAGACCCCAGGCTACCATTGTG | + |
Preference number: 3 (lower is better) Translates to: RWECCPGKCQAG*SPCCRPQATIV Trigger: CACAATGGTAGCCTGGGGTCTACAGCAGGGACTCCACCCAGCCTGACATTTCCCTGGACAGCACTCCCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
||
3UTR CCA 72 bp | TGGCAATACTCCACCAGCTTCCTCAGGTGGGCCTCATaGTTCTGCGGGCCATGGTTGGTATCTCTGTCCAGG | + |
Preference number: 3 (lower is better) Translates to: WQYSTSFLRWAS*FCGPWLVSLSR Trigger: CCTGGACAGAGATACCAACCATGGCCCGCAGAACCATGAGGCCCACCTGAGGAAGCTGGTGGAGTATTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
||
3UTR TCA 72 bp | GCCTGTGAACCCTATTTTCCTCACATCAGGGTGGTCTaGGAGTCTCTGGCCAACCAGCGAGCCAGATCCTGG | + |
Preference number: 3 (lower is better) Translates to: ACEPYFPHIRVV*ESLANQRARSW Trigger: CCAGGATCTGGCTCGCTGGTTGGCCAGAGACTCTCAGACCACCCTGATGTGAGGAAAATAGGGTTCACAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
||
3UTR GCA 72 bp | CTTTCCCCACAGTCCATTCTCAAAGGCCTCCTTCGCTaGTGCCACCGCCTTGTCAACATCACTCACCTGAGC | + |
Preference number: 3 (lower is better) Translates to: LSPQSILKGLLR*CHRLVNITHLS Trigger: GCTCAGGTGAGTGATGTTGACAAGGCGGTGGCAGCAGCGAAGGAGGCCTTTGAGAATGGACTGTGGGGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
||
3UTR CCA 72 bp | ACCTCCAGAATGAAGAAGGTACAGAGGAGAGGGCCTTaGGCACCCACGGGTGAGTGCATAGGAGTCAGAAGC | + |
Preference number: 3 (lower is better) Translates to: TSRMKKVQRRGP*APTGECIGVRS Trigger: GCTTCTGACTCCTATGCACTCACCCGTGGGTGCCCAAGGCCCTCTCCTCTGTACCTTCTTCATTCTGGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
||
3UTR CCA 72 bp | CTTCCTCCACCACTTTCTGCACAAACTGGTCATGGATaGAGTCCTCCACAAAGAGCCGGCCTGCCGCAATGC | + |
Preference number: 3 (lower is better) Translates to: LPPPLSAQTGHG*SPPQRAGLPQC Trigger: GCATTGCGGCAGGCCGGCTCTTTGTGGAGGACTCCATCCATGACCAGTTTGTGCAGAAAGTGGTGGAGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
||
3UTR-3UTR CAA 90 bp | GTGAAGACACCAGAGGCCAGGCCAAATTCTGTAGCATTGGCCCGAGATAGCACTTTGGTCAAGGTCAGGTaGCGGTTGGGTCTAGCCTGG | + |
Preference number: 3 (lower is better) Translates to: VKTPEARPNSVALARDSTLVKVR*RLGLAW Trigger: CCAGGCTAGACCCAACCGCAACCTGACCTTGACCAA...AGTGCTATCTCGGGCCAATGCTACAGAATTTGGCCTGGCCTCTGGTGTCTTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
||
3UTR GCA 72 bp | GGCCTGAAATCTTTGCGACTGATCCAGGTCACTGCCTaGCTGGCCAGGGGAGTTAGAGAAGAACAGAAAGGC | + |
Preference number: 3 (lower is better) Translates to: GLKSLRLIQVTA*LARGVREEQKG Trigger: GCCTTTCTGTTCTTCTCTAACTCCCCTGGCCAGGCAGGCAGTGACCTGGATCAGTCGCAAAGATTTCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
||
3UTR GCA 72 bp | CTGAGGCATGTGCCCCACTTAAGAGAAGGGCAGGGATaGGGAGGAAGTCCGGGATACTACATAGGCCTGAAA | + |
Preference number: 3 (lower is better) Translates to: LRHVPHLREGQG*GGSPGYYIGLK Trigger: TTTCAGGCCTATGTAGTATCCCGGACTTCCTCCGCATCCCTGCCCTTCTCTTAAGTGGGGCACATGCCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
||
3UTR TCA 72 bp | GAGGGTGCTAAGTCACCAGACAGGGTCAGCACTCCCTaGGGTCAACAGGGTACAGGAGAAGTATCACAGTCT | + |
Preference number: 3 (lower is better) Translates to: EGAKSPDRVSTP*GQQGTGEVSQS Trigger: AGACTGTGATACTTCTCCTGTACCCTGTTGACCTCAGGGAGTGCTGACCCTGTCTGGTGACTTAGCACCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
||
3UTR TCA 72 bp | TCTTCGCGCCCTCAGCATCCACAAACTCGCCGCCTATaGAGAGCTGGTAGGGCATTTGGAGAGTCAGTTTCT | + |
Preference number: 3 (lower is better) Translates to: SSRPQHPQTRRL*RAGRAFGESVS Trigger: AGAAACTGACTCTCCAAATGCCCTACCAGCTCTTCATAGGCGGCGAGTTTGTGGATGCTGAGGGCGCGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
||
3UTR GCA 72 bp | TCTGCGGGCCATGGTTGGTATCTCTGTCCAGGGGGTTaGCGATTTTCATCTTCCCTACTTCCTCCACCACTT | + |
Preference number: 3 (lower is better) Translates to: SAGHGWYLCPGG*RFSSSLLPPPL Trigger: AAGTGGTGGAGGAAGTAGGGAAGATGAAAATCGGCAACCCCCTGGACAGAGATACCAACCATGGCCCGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR TCA 72 bp | GAAGGCCAAGTGATGCTACATGCTCAGGACTCATGGTaGCCACTGCCTCTGGTTCCATACGAGGCATCCATA | + |
Preference number: 3 (lower is better) Translates to: EGQVMLHAQDSW*PLPLVPYEASI Trigger: TATGGATGCCTCGTATGGAACCAGAGGCAGTGGTCACCATGAGTCCTGAGCATGTAGCATCACTTGGCCTTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
||
3UTR TCA 72 bp | ATTTCCTCCTGTGTCCCACTAAGGGGTCTCGTTCTCTaGAGGCCAAGTGATGCTACATGCTCAGGACTCATG | + |
Preference number: 3 (lower is better) Translates to: ISSCVPLRGLVL*RPSDATCSGLM Trigger: CATGAGTCCTGAGCATGTAGCATCACTTGGCCTTCAGAGAACGAGACCCCTTAGTGGGACACAGGAGGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
||
3UTR TCA 72 bp | AAATCTGTTGAGATGTGGTATGTGGGACCTCCAGAATaGAGAAGGTACAGAGGAGAGGGCCTTGGGCACCCA | + |
Preference number: 3 (lower is better) Translates to: KSVEMWYVGPPE*RRYRGEGLGHP Trigger: TGGGTGCCCAAGGCCCTCTCCTCTGTACCTTCTTCATTCTGGAGGTCCCACATACCACATCTCAACAGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
||
3UTR TCA 72 bp | CACTTAGTGGACACATGGCCAGTGACAGTGTCACTGTaGCCACCCAGTTTCCTATTCCAACAGCCATGTGGT | + |
Preference number: 3 (lower is better) Translates to: HLVDTWPVTVSL*PPSFLFQQPCG Trigger: ACCACATGGCTGTTGGAATAGGAAACTGGGTGGTCACAGTGACACTGTCACTGGCCATGTGTCCACTAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
||
3UTR CCA 72 bp | GATGTACATGTGGTCCTCCACGTCTGTGAAAACGGTTaGCTGAAAGAAGAAGCCTGGCCTTGGGACTTGGTT | + |
Preference number: 3 (lower is better) Translates to: DVHVVLHVCENG*LKEEAWPWDLV Trigger: AACCAAGTCCCAAGGCCAGGCTTCTTCTTTCAGCCAACCGTTTTCACAGACGTGGAGGACCACATGTACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
||
3UTR GCA 72 bp | CTCTTGTACCCATTCTGCTTTTGGAGGTGTGTGATGTaGATTTCCTCCTGTGTCCCACTAAGGGGTCTCGTT | + |
Preference number: 3 (lower is better) Translates to: LLYPFCFWRCVM*ISSCVPLRGLV Trigger: AACGAGACCCCTTAGTGGGACACAGGAGGAAATGCACATCACACACCTCCAAAAGCAGAATGGGTACAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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3UTR CCA 72 bp | CCAAGAGAGGCAGAGCCAAAGAAAGGTGGTAGTGGTTaGCATGCCAAGAAGAGAATGTTGGGTAAACCAAGG | + |
Preference number: 3 (lower is better) Translates to: PREAEPKKGGSG*HAKKRMLGKPR Trigger: CCTTGGTTTACCCAACATTCTCTTCTTGGCATGCCAACCACTACCACCTTTCTTTGGCTCTGCCTCTCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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3UTR TCA 72 bp | GCGACCTCTGCTCACAATTTTTATTCATGGGGGACATaGCTGCTCACTCCACTTGGAGCCACTTCTGATTGT | + |
Preference number: 3 (lower is better) Translates to: ATSAHNFYSWGT*LLTPLGATSDC Trigger: ACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGGTCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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3UTR GCA 72 bp | CCGATTTTCATCTTCCCTACTTCCTCCACCACTTTCTaGACAAACTGGTCATGGATGGAGTCCTCCACAAAG | + |
Preference number: 3 (lower is better) Translates to: PIFIFPTSSTTF*TNWSWMESSTK Trigger: CTTTGTGGAGGACTCCATCCATGACCAGTTTGTGCAGAAAGTGGTGGAGGAAGTAGGGAAGATGAAAATCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR GCA 72 bp | CCTCTGCTCACAATTTTTATTCATGGGGGACATGACTaGTCACTCCACTTGGAGCCACTTCTGATTGTTCAG | + |
Preference number: 3 (lower is better) Translates to: PLLTIFIHGGHD*SLHLEPLLIVQ Trigger: CTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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3UTR CCA 72 bp | TGGTGTAAGATAAAAAGAAATGCAGATGGTAGAAGATaGGAGTGCTGTCCAGGGAAATGTCAGGCTGGGTGG | + |
Preference number: 3 (lower is better) Translates to: WCKIKRNADGRR*ECCPGKCQAGW Trigger: CCACCCAGCCTGACATTTCCCTGGACAGCACTCCCATCTTCTACCATCTGCATTTCTTTTTATCTTACACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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3UTR GCA 72 bp | ATAGACAGAGCAGTGACACAAAGTGTAGGCGACCTCTaGTCACAATTTTTATTCATGGGGGACATGACTGCT | + |
Preference number: 3 (lower is better) Translates to: IDRAVTQSVGDL*SQFLFMGDMTA Trigger: AGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGGTCGCCTACACTTTGTGTCACTGCTCTGTCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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3UTR CCA 72 bp | CTCAGATTTGCTACTCTGGAATCAATATTAGGTATGTaGCTTCTCACTGACGAAAATGTTACTCTGAGGCAT | + |
Preference number: 3 (lower is better) Translates to: LRFATLESILGM*LLTDENVTLRH Trigger: ATGCCTCAGAGTAACATTTTCGTCAGTGAGAAGCCACATACCTAATATTGATTCCAGAGTAGCAAATCTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | GTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCGCTCCGCACGGCCTCTaGTGTGGCCAGCTCCTCCTC | + |
Preference number: 4 (lower is better) Translates to: VSCHQQGSRPRAPAAERSAPHGL*CGQLLL Trigger: GAGGAGGAGCTGGCCACAGCAGAGGCCGTGCGGAGC...GCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | CCCCTTCCTTCACACCACGTTGGCAATACTCCACCAGCTTCCTCAGGTGGGCCTGCTCCGCACGGCCTCTaGTGTGGCCAGCTCCTCCTC | + |
Preference number: 4 (lower is better) Translates to: PLPSHHVGNTPPASSGGPAPHGL*CGQLLL Trigger: GAGGAGGAGCTGGCCACAGCAGAGGCCGTGCGGAGC...AGGCCCACCTGAGGAAGCTGGTGGAGTATTGCCAACGTGGTGTGAAGGAAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
||
CDS-3UTR TCA 90 bp | CACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCGGTCCAGTTGATGGCTaGGGCCCCTCGGTGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: HLEPLLIVQRVSCHQQGSGPVDG*GPSVPG Trigger: CCCAGGCACCGAGGGGCCTCAGCCATCAACTGGACC...GGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | CCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGTGCTAAGTGCTGAGGCCCCTCGGTaGCTGGGCAGCAGAGATGGA | + |
Preference number: 4 (lower is better) Translates to: PRAPAAERSSAGDRRVLSAEAPR*LGSRDG Trigger: TCCATCTCTGCTGCCCAGGCACCGAGGGGCCTCAGC...ACTTAGCACCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | TCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGACGGCGTGGGGCTGTaGCCTCTGCAATCAGTCGCA | + |
Preference number: 4 (lower is better) Translates to: SCHQQGSRPRAPAAERSSDGVGL*PLQSVA Trigger: TGCGACTGATTGCAGAGGGCACAGCCCCACGCCGTC...ACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | CACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCGCTCCGCACGGCCTCTaGTGTGGCCAGCTCCTCCTC | + |
Preference number: 4 (lower is better) Translates to: HLEPLLIVQRVSCHQQGSAPHGL*CGQLLL Trigger: GAGGAGGAGCTGGCCACAGCAGAGGCCGTGCGGAGC...GGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | GTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCGTGAGTGGGGTCACCTaGGCAGGCTTGATCACCACG | + |
Preference number: 4 (lower is better) Translates to: VSCHQQGSRPRAPAAERSVSGVT*AGLITT Trigger: CGTGGTGATCAAGCCTGCCCAGGTGACCCCACTCAC...GCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | GGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGCCTGGCCTTGGGACTTaGTTCCCACCACAGACCAGT | + |
Preference number: 4 (lower is better) Translates to: GPGQELQQLKGAVLGTGGPGLGT*FPPQTS Trigger: ACTGGTCTGTGGTGGGAACCAAGTCCCAAGGCCAGG...CCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | GTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCGGTAGAGCTTCTCCCTaGGCCACCAGTCCTGAAGTG | + |
Preference number: 4 (lower is better) Translates to: VSCHQQGSRPRAPAAERSGRASP*ATSPEV Trigger: CACTTCAGGACTGGTGGCTCAGGGAGAAGCTCTACC...GCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | AGTGCTGGGGACAGGAGGGTGCTAAGTCACCAGACAGGGTCAGCACTCCCTGAGCCTGGTGCTGCTCCATaGGGTCCGCCAACCTGTACA | + |
Preference number: 4 (lower is better) Translates to: SAGDRRVLSHQTGSALPEPGAAP*GPPTCT Trigger: TGTACAGGTTGGCGGACCTCATGGAGCAGCACCAGG...CTCAGGGAGTGCTGACCCTGTCTGGTGACTTAGCACCCTCCTGTCCCCAGCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | AGGCTGGGTGGAGTCCCTGCTGTAGACCCCAGGCTACCATTGTGGCTGTCCAAGCCTGGTGCTGCTCCATaGGGTCCGCCAACCTGTACA | + |
Preference number: 4 (lower is better) Translates to: RLGGVPAVDPRLPLWLSKPGAAP*GPPTCT Trigger: TGTACAGGTTGGCGGACCTCATGGAGCAGCACCAGG...CTTGGACAGCCACAATGGTAGCCTGGGGTCTACAGCAGGGACTCCACCCAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | CTCCCCAAGTCTCATTTCCTGTTTCTGGGGCGCACCCTCTTCCACAGCCTCTTGGCTGAGGCCCCTCGGTaGCTGGGCAGCAGAGATGGA | + |
Preference number: 4 (lower is better) Translates to: LPKSHFLFLGRTLFHSLLAEAPR*LGSRDG Trigger: TCCATCTCTGCTGCCCAGGCACCGAGGGGCCTCAGC...CAAGAGGCTGTGGAAGAGGGTGCGCCCCAGAAACAGGAAATGAGACTTGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
||
CDS-3UTR GCA 90 bp | TCCCCACAGTCCATTCTCAAAGGCCTCCTTCGCTGCTGCCACCGCCTTGTCAACGACGGCGTGGGGCTGTaGCCTCTGCAATCAGTCGCA | + |
Preference number: 4 (lower is better) Translates to: SPQSILKGLLRCCHRLVNDGVGL*PLQSVA Trigger: TGCGACTGATTGCAGAGGGCACAGCCCCACGCCGTC...GTTGACAAGGCGGTGGCAGCAGCGAAGGAGGCCTTTGAGAATGGACTGTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
||
CDS-3UTR CCA 90 bp | TCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGGCCCCTCGGTGCCTaGGCAGCAGAGATGGATGGT | + |
Preference number: 4 (lower is better) Translates to: SDCSEGVLSPAGVQAKSSRPLGA*AAEMDG Trigger: ACCATCCATCTCTGCTGCCCAGGCACCGAGGGGCCT...GGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | GCTGGGGACAGGAGGGTGCTAAGTCACCAGACAGGGTCAGCACTCCCTGAGGTCCTCTGTCCAGGCACCTaGCACCTTGTCATTCCCACG | + |
Preference number: 4 (lower is better) Translates to: AGDRRVLSHQTGSALPEVLCPGT*HLVIPT Trigger: CGTGGGAATGACAAGGTGCCAGGTGCCTGGACAGAG...GACCTCAGGGAGTGCTGACCCTGTCTGGTGACTTAGCACCCTCCTGTCCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | GTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCGATGGGCTCCTGGGATaGGTAGAGCTTCTCCCTGAG | + |
Preference number: 4 (lower is better) Translates to: VSCHQQGSRPRAPAAERSDGLLG*VELLPE Trigger: CTCAGGGAGAAGCTCTACCCATCCCAGGAGCCCATC...GCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | CTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGGCACGGCCTCTGCTGTaGCCAGCTCCTCCTCGGTCA | + |
Preference number: 4 (lower is better) Translates to: LHLEPLLIVQRVSCHQQGARPLL*PAPPRS Trigger: TGACCGAGGAGGAGCTGGCCACAGCAGAGGCCGTGC...CCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | GCTGGGGACAGGAGGGTGCTAAGTCACCAGACAGGGTCAGCACTCCCTGAGGTCCTTCAAGGCTGTGAGTaGGGTCACCTGGGCAGGCTT | + |
Preference number: 4 (lower is better) Translates to: AGDRRVLSHQTGSALPEVLQGCE*GHLGRL Trigger: AAGCCTGCCCAGGTGACCCCACTCACAGCCTTGAAG...GACCTCAGGGAGTGCTGACCCTGTCTGGTGACTTAGCACCCTCCTGTCCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | GCTGGGGACAGGAGGGTGCTAAGTCACCAGACAGGGTCAGCACTCCCTGAGGTCCCTTGTCTGGGATGGTaGACACACCCACCACCTCAT | + |
Preference number: 4 (lower is better) Translates to: AGDRRVLSHQTGSALPEVPCLGW*THPPPH Trigger: ATGAGGTGGTGGGTGTGTTCACCATCCCAGACAAGG...GACCTCAGGGAGTGCTGACCCTGTCTGGTGACTTAGCACCCTCCTGTCCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | GCTGGGGACAGGAGGGTGCTAAGTCACCAGACAGGGTCAGCACTCCCTGAGGTCCCTGAACCATCCCTTTaGTGCCCTCTGGGAAGAGGA | + |
Preference number: 4 (lower is better) Translates to: AGDRRVLSHQTGSALPEVPEPSL*CPLGRG Trigger: TCCTCTTCCCAGAGGGCATCAAAGGGATGGTTCAGG...GACCTCAGGGAGTGCTGACCCTGTCTGGTGACTTAGCACCCTCCTGTCCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | GGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGCTGGCTGGTCCCAGTTaGTCATGGCTGTCTCCTTTT | + |
Preference number: 4 (lower is better) Translates to: GPGQELQQLKGAVLGTGGLAGPS*SWLSPF Trigger: AAAAGGAGACAGCCATGATCAACTGGGACCAGCCAG...CCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | GGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCGGTAGAGCTTCTCCCTaGGCCACCAGTCCTGAAGTG | + |
Preference number: 4 (lower is better) Translates to: GATSDCSEGVLSPAGVQAGRASP*ATSPEV Trigger: CACTTCAGGACTGGTGGCTCAGGGAGAAGCTCTACC...GGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | AGTGCTGGGGACAGGAGGGTGCTAAGTCACCAGACAGGGTCAGCACTCCCTGAGCAGGCCCAGGGGATCTaGTTTCCCATCCTTGTCTGG | + |
Preference number: 4 (lower is better) Translates to: SAGDRRVLSHQTGSALPEQAQGI*FPILVW Trigger: CCAGACAAGGATGGGAAAGCAGATCCCCTGGGCCTG...CTCAGGGAGTGCTGACCCTGTCTGGTGACTTAGCACCCTCCTGTCCCCAGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | CTTCCTTCACACCACGTTGGCAATACTCCACCAGCTTCCTCAGGTGGGCCTCATGCTGAGGCCCCTCGGTaGCTGGGCAGCAGAGATGGA | + |
Preference number: 4 (lower is better) Translates to: LPSHHVGNTPPASSGGPHAEAPR*LGSRDG Trigger: TCCATCTCTGCTGCCCAGGCACCGAGGGGCCTCAGC...ATGAGGCCCACCTGAGGAAGCTGGTGGAGTATTGCCAACGTGGTGTGAAGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | TCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCGCTAGCTCTTCCTGGTaGTGCTCCATGAGGTCCGCC | + |
Preference number: 4 (lower is better) Translates to: SDCSEGVLSPAGVQAKSSASSSW*CSMRSA Trigger: GGCGGACCTCATGGAGCAGCACCAGGAAGAGCTAGC...GGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | AGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGGTCTGGATGGACATaGCCACATGCGTCTTCAGGG | + |
Preference number: 4 (lower is better) Translates to: RVSCHQQGSRPRAPAAERRSGWT*PHASSG Trigger: CCCTGAAGACGCATGTGGGCATGTCCATCCAGACCT...CCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | AGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGCCTGGGCAGCAGAGATaGATGGTAGATGATGGAGCC | + |
Preference number: 4 (lower is better) Translates to: RVSCHQQGSRPRAPAAERPGQQR*MVDDGA Trigger: GGCTCCATCATCTACCATCCATCTCTGCTGCCCAGG...CCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | GGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGGCTCACGGTGTCATCTaGAAGCACGTCACACTCCTT | + |
Preference number: 4 (lower is better) Translates to: GPGQELQQLKGAVLGTGGAHGVI*KHVTLL Trigger: AAGGAGTGTGACGTGCTTCCAGATGACACCGTGAGC...CCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | CATTCTCAAAGGCCTCCTTCGCTGCTGCCACCGCCTTGTCAACATCACTCACCTGCACGGCCTCTGCTGTaGCCAGCTCCTCCTCGGTCA | + |
Preference number: 4 (lower is better) Translates to: HSQRPPSLLPPPCQHHSPARPLL*PAPPRS Trigger: TGACCGAGGAGGAGCTGGCCACAGCAGAGGCCGTGC...AGGTGAGTGATGTTGACAAGGCGGTGGCAGCAGCGAAGGAGGCCTTTGAGAATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | TCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTCGTCCAGGGCCTCAATaGTGGCTAGCTCTTCCTGGT | + |
Preference number: 4 (lower is better) Translates to: SCHQQGSRPRAPAAERSSRPGPQ*WLALPG Trigger: ACCAGGAAGAGCTAGCCACCATTGAGGCCCTGGACG...ACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | GGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCCGGTTGGGTCTAGCCTaGTTGATGGGGATGGTGGCA | + |
Preference number: 4 (lower is better) Translates to: GATSDCSEGVLSPAGVQARLGLA*LMGMVA Trigger: TGCCACCATCCCCATCAACCAGGCTAGACCCAACCG...GGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | GACCAAGAGAGGCAGAGCCAAAGAAAGGTGGTAGTGGTTGGCATGCCAAGAAGAGGTCCAGTTGATGGCTaGGGCCCCTCGGTGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: DQERQSQRKVVVVGMPRRGPVDG*GPSVPG Trigger: CCCAGGCACCGAGGGGCCTCAGCCATCAACTGGACC...TCTTCTTGGCATGCCAACCACTACCACCTTTCTTTGGCTCTGCCTCTCTTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | GCTGGGGACAGGAGGGTGCTAAGTCACCAGACAGGGTCAGCACTCCCTGAGGTCCTGGCTGGTCCCAGTTaGTCATGGCTGTCTCCTTTT | + |
Preference number: 4 (lower is better) Translates to: AGDRRVLSHQTGSALPEVLAGPS*SWLSPF Trigger: AAAAGGAGACAGCCATGATCAACTGGGACCAGCCAG...GACCTCAGGGAGTGCTGACCCTGTCTGGTGACTTAGCACCCTCCTGTCCCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | ACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCCCACGGATCCAGTTGTaGATGGCCTCTGCTGGCTGG | + |
Preference number: 4 (lower is better) Translates to: TSDCSEGVLSPAGVQAKSPRIQL*MASAGW Trigger: CCAGCCAGCAGAGGCCATTCACAACTGGATCCGTGG...GCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | GCTGGGGACAGGAGGGTGCTAAGTCACCAGACAGGGTCAGCACTCCCTGAGGTCCCTCCGTGGAGCCTGTaGACCCTATTTTCCTCACAT | + |
Preference number: 4 (lower is better) Translates to: AGDRRVLSHQTGSALPEVPPWSL*TLFSSH Trigger: ATGTGAGGAAAATAGGGTTCACAGGCTCCACGGAGG...GACCTCAGGGAGTGCTGACCCTGTCTGGTGACTTAGCACCCTCCTGTCCCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | AGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGACGTCACACTCCTTCTaGAGCAGAAGGTCACCAGTG | + |
Preference number: 4 (lower is better) Translates to: RVSCHQQGSRPRAPAAERTSHSF*SRRSPV Trigger: CACTGGTGACCTTCTGCTGCAGAAGGAGTGTGACGT...CCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | ACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCGGCCTCCTTCGCTGCTaGCACCGCCTTGTCAACATC | + |
Preference number: 4 (lower is better) Translates to: TSDCSEGVLSPAGVQAKSGLLRC*HRLVNI Trigger: GATGTTGACAAGGCGGTGGCAGCAGCGAAGGAGGCC...GCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | GGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAGGTCTGGATGGACATaGCCACATGCGTCTTCAGGG | + |
Preference number: 4 (lower is better) Translates to: GATSDCSEGVLSPAGVQARSGWT*PHASSG Trigger: CCCTGAAGACGCATGTGGGCATGTCCATCCAGACCT...GGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | AGGCTGGGTGGAGTCCCTGCTGTAGACCCCAGGCTACCATTGTGGCTGTCCAAGCCACACCCTTGGGAATaGCAGCCTTCAGTGTCAGCT | + |
Preference number: 4 (lower is better) Translates to: RLGGVPAVDPRLPLWLSKPHPWE*QPSVSA Trigger: AGCTGACACTGAAGGCTGGCATTCCCAAGGGTGTGG...CTTGGACAGCCACAATGGTAGCCTGGGGTCTACAGCAGGGACTCCACCCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | GGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGAACACAGTGCCCGCCTaGAGTTTGTCACTGACATAC | + |
Preference number: 4 (lower is better) Translates to: GPGQELQQLKGAVLGTGGNTVPA*SLSLTY Trigger: GTATGTCAGTGACAAACTGCAGGCGGGCACTGTGTT...CCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGTGCTAAGTCTCTGTCCAGGCACCTaGCACCTTGTCATTCCCACG | + |
Preference number: 4 (lower is better) Translates to: PRAPAAERSSAGDRRVLSLCPGT*HLVIPT Trigger: CGTGGGAATGACAAGGTGCCAGGTGCCTGGACAGAG...ACTTAGCACCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | TCCCCACAGTCCATTCTCAAAGGCCTCCTTCGCTGCTGCCACCGCCTTGTCAACGATGGGCTCCTGGGATaGGTAGAGCTTCTCCCTGAG | + |
Preference number: 4 (lower is better) Translates to: SPQSILKGLLRCCHRLVNDGLLG*VELLPE Trigger: CTCAGGGAGAAGCTCTACCCATCCCAGGAGCCCATC...GTTGACAAGGCGGTGGCAGCAGCGAAGGAGGCCTTTGAGAATGGACTGTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | CCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGTTCCTCACTAGGAGCTaGATGAAGTCCCCGAAGGTG | + |
Preference number: 4 (lower is better) Translates to: PVTSRGPGQELQQLKGAVFLTRS*MKSPKV Trigger: CACCTTCGGGGACTTCATCCAGCTCCTAGTGAGGAA...CACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | GCTGGGGACAGGAGGGTGCTAAGTCACCAGACAGGGTCAGCACTCCCTGAGGTCTTCCTCACTAGGAGCTaGATGAAGTCCCCGAAGGTG | + |
Preference number: 4 (lower is better) Translates to: AGDRRVLSHQTGSALPEVFLTRS*MKSPKV Trigger: CACCTTCGGGGACTTCATCCAGCTCCTAGTGAGGAA...GACCTCAGGGAGTGCTGACCCTGTCTGGTGACTTAGCACCCTCCTGTCCCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CAGGGAAATGTCAGGCTGGGTGGAGTCCCTGCTGTAGACCCCAGGCTACCATTGCCAGGGCCTCAATGGTaGCTAGCTCTTCCTGGTGCT | + |
Preference number: 4 (lower is better) Translates to: QGNVRLGGVPAVDPRLPLPGPQW*LALPGA Trigger: AGCACCAGGAAGAGCTAGCCACCATTGAGGCCCTGG...CAATGGTAGCCTGGGGTCTACAGCAGGGACTCCACCCAGCCTGACATTTCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGTGCTAAGTCCTGGCCTTGGGACTTaGTTCCCACCACAGACCAGT | + |
Preference number: 4 (lower is better) Translates to: PRAPAAERSSAGDRRVLSPGLGT*FPPQTS Trigger: ACTGGTCTGTGGTGGGAACCAAGTCCCAAGGCCAGG...ACTTAGCACCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | CAGGGAAATGTCAGGCTGGGTGGAGTCCCTGCTGTAGACCCCAGGCTACCATTGCCTGAACCATCCCTTTaGTGCCCTCTGGGAAGAGGA | + |
Preference number: 4 (lower is better) Translates to: QGNVRLGGVPAVDPRLPLPEPSL*CPLGRG Trigger: TCCTCTTCCCAGAGGGCATCAAAGGGATGGTTCAGG...CAATGGTAGCCTGGGGTCTACAGCAGGGACTCCACCCAGCCTGACATTTCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | CCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGTGCTAAGTATCAGTCGCACAGCCTaGACCATCCCTTTGATGCCC | + |
Preference number: 4 (lower is better) Translates to: PRAPAAERSSAGDRRVLSISRTA*TIPLMP Trigger: GGGCATCAAAGGGATGGTTCAGGCTGTGCGACTGAT...ACTTAGCACCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | GTGACCACCCAGTTTCCTATTCCAACAGCCATGTGGTGGGGTTTACACGGCCCCGGTAGAGCTTCTCCCTaGGCCACCAGTCCTGAAGTG | + |
Preference number: 4 (lower is better) Translates to: VTTQFPIPTAMWWGLHGPGRASP*ATSPEV Trigger: CACTTCAGGACTGGTGGCTCAGGGAGAAGCTCTACC...GGGGCCGTGTAAACCCCACCACATGGCTGTTGGAATAGGAAACTGGGTGGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | CTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAATCCTGGGAGGATGTTaGCCACACCCTTGGGAATGC | + |
Preference number: 4 (lower is better) Translates to: LIVQRVSCHQQGSRPRAPILGGC*PHPWEC Trigger: GCATTCCCAAGGGTGTGGTCAACATCCTCCCAGGAT...TGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | TCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGGGCACAGCTTTTCATaGTGTGTTTTCCCACCTCCG | + |
Preference number: 4 (lower is better) Translates to: SCHQQGSRPRAPAAERSSGHSFS*CVFPPP Trigger: CGGAGGTGGGAAAACACATCATGAAAAGCTGTGCCC...ACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | AGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGCAAATCCAGACTGCTTaGATCCTCCAAAAGGTGCGG | + |
Preference number: 4 (lower is better) Translates to: RVSCHQQGSRPRAPAAERQIQTA*ILQKVR Trigger: CCGCACCTTTTGGAGGATTCAAGCAGTCTGGATTTG...CCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | CTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGACGGCGTGGGGCTGTaGCCTCTGCAATCAGTCGCA | + |
Preference number: 4 (lower is better) Translates to: LLTPLGATSDCSEGVLSPDGVGL*PLQSVA Trigger: TGCGACTGATTGCAGAGGGCACAGCCCCACGCCGTC...TGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | CCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGGAGCTCATGCCCATCTaGACAGCTTTGTTGAGGTCA | + |
Preference number: 4 (lower is better) Translates to: PVTSRGPGQELQQLKGAVELMPI*TALLRS Trigger: TGACCTCAACAAAGCTGTGCAGATGGGCATGAGCTC...CACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | AGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAACACAGTGCCCGCCTaGAGTTTGTCACTGACATAC | + |
Preference number: 4 (lower is better) Translates to: RVSCHQQGSRPRAPAAERNTVPA*SLSLTY Trigger: GTATGTCAGTGACAAACTGCAGGCGGGCACTGTGTT...CCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | GTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCTTTCCCATCCTTGTCTaGGATGGTGAACACACCCAC | + |
Preference number: 4 (lower is better) Translates to: VSCHQQGSRPRAPAAERSFPILV*DGEHTH Trigger: GTGGGTGTGTTCACCATCCCAGACAAGGATGGGAAA...GCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | TGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGAGGCCCCTCGGTGCCTaGGCAGCAGAGATGGATGGT | + |
Preference number: 4 (lower is better) Translates to: CSLHLEPLLIVQRVSCHQRPLGA*AAEMDG Trigger: ACCATCCATCTCTGCTGCCCAGGCACCGAGGGGCCT...CTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | GCTGGGGACAGGAGGGTGCTAAGTCACCAGACAGGGTCAGCACTCCCTGAGGTCCCCTTTGATGCCCTCTaGGAAGAGGAAACGGTTGTA | + |
Preference number: 4 (lower is better) Translates to: AGDRRVLSHQTGSALPEVPFDAL*EEETVV Trigger: TACAACCGTTTCCTCTTCCCAGAGGGCATCAAAGGG...GACCTCAGGGAGTGCTGACCCTGTCTGGTGACTTAGCACCCTCCTGTCCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | GTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCCCCTTTGATGCCCTCTaGGAAGAGGAAACGGTTGTA | + |
Preference number: 4 (lower is better) Translates to: VSCHQQGSRPRAPAAERSPFDAL*EEETVV Trigger: TACAACCGTTTCCTCTTCCCAGAGGGCATCAAAGGG...GCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | CACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCCTCTGTCCAGGCACCTaGCACCTTGTCATTCCCACG | + |
Preference number: 4 (lower is better) Translates to: HLEPLLIVQRVSCHQQGSLCPGT*HLVIPT Trigger: CGTGGGAATGACAAGGTGCCAGGTGCCTGGACAGAG...GGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | ACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCGATGGGCTCCTGGGATaGGTAGAGCTTCTCCCTGAG | + |
Preference number: 4 (lower is better) Translates to: TSDCSEGVLSPAGVQAKSDGLLG*VELLPE Trigger: CTCAGGGAGAAGCTCTACCCATCCCAGGAGCCCATC...GCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | CTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGACTAGGCCTGGACGATaGGCTCCTGGGATGGGTAGA | + |
Preference number: 4 (lower is better) Translates to: LHLEPLLIVQRVSCHQQGTRPGR*APGMGR Trigger: TCTACCCATCCCAGGAGCCCATCGTCCAGGCCTAGT...CCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | TCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGACCCCTTGAAGAACTaGGAGGCTGGCATCATCTTG | + |
Preference number: 4 (lower is better) Translates to: SCHQQGSRPRAPAAERSSDPLKN*EAGIIL Trigger: CAAGATGATGCCAGCCTCCCAGTTCTTCAAGGGGTC...ACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | GGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGAGAGTCTTCTACCTCTaGGACATTGGGCAGAATTCG | + |
Preference number: 4 (lower is better) Translates to: GPGQELQQLKGAVLGTGGRVFYL*DIGQNS Trigger: CGAATTCTGCCCAATGTCCCAGAGGTAGAAGACTCT...CCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | GTGACCACCCAGTTTCCTATTCCAACAGCCATGTGGTGGGGTTTACACGGCCCCCTTCAAGGCTGTGAGTaGGGTCACCTGGGCAGGCTT | + |
Preference number: 4 (lower is better) Translates to: VTTQFPIPTAMWWGLHGPLQGCE*GHLGRL Trigger: AAGCCTGCCCAGGTGACCCCACTCACAGCCTTGAAG...GGGGCCGTGTAAACCCCACCACATGGCTGTTGGAATAGGAAACTGGGTGGTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
||
CDS-3UTR TCA 90 bp | GGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGTACGGATGCAGCTCCTaGCTTGAAGAAATCTGTAGA | + |
Preference number: 4 (lower is better) Translates to: GPGQELQQLKGAVLGTGGYGCSS*LEEICR Trigger: TCTACAGATTTCTTCAAGTCAGGAGCTGCATCCGTA...CCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | AGTGCTGGGGACAGGAGGGTGCTAAGTCACCAGACAGGGTCAGCACTCCCTGAGGATAGTTCCAGGGGATaGCAATACCACAGACCCCAA | + |
Preference number: 4 (lower is better) Translates to: SAGDRRVLSHQTGSALPEDSSRG*QYHRPQ Trigger: TTGGGGTCTGTGGTATTGTCATCCCCTGGAACTATC...CTCAGGGAGTGCTGACCCTGTCTGGTGACTTAGCACCCTCCTGTCCCCAGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
||
CDS-3UTR TCA 90 bp | GGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCGATAGTTCCAGGGGATaGCAATACCACAGACCCCAA | + |
Preference number: 4 (lower is better) Translates to: GATSDCSEGVLSPAGVQADSSRG*QYHRPQ Trigger: TTGGGGTCTGTGGTATTGTCATCCCCTGGAACTATC...GGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
||
CDS-3UTR TCA 90 bp | CACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCATCCTGGGAGGATGTTaGCCACACCCTTGGGAATGC | + |
Preference number: 4 (lower is better) Translates to: HLEPLLIVQRVSCHQQGSILGGC*PHPWEC Trigger: GCATTCCCAAGGGTGTGGTCAACATCCTCCCAGGAT...GGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
||
CDS-3UTR TCA 90 bp | CTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGGTCCTCCACGTCTGTaGAAACGGTTGGCTGAAAGA | + |
Preference number: 4 (lower is better) Translates to: LIVQRVSCHQQGSRPRAPGPPRL*KRLAER Trigger: TCTTTCAGCCAACCGTTTTCACAGACGTGGAGGACC...TGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
||
CDS-3UTR GCA 90 bp | CTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGTTGTGAATGGCCTCTaGTGGCTGGTCCCAGTTGAT | + |
Preference number: 4 (lower is better) Translates to: LIVQRVSCHQQGSRPRAPVVNGL*WLVPVD Trigger: ATCAACTGGGACCAGCCAGCAGAGGCCATTCACAAC...TGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
||
CDS-3UTR GCA 90 bp | CTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCTAGCTCTTCCTGGTaGTGCTCCATGAGGTCCGCC | + |
Preference number: 4 (lower is better) Translates to: LLTPLGATSDCSEGVLSPASSSW*CSMRSA Trigger: GGCGGACCTCATGGAGCAGCACCAGGAAGAGCTAGC...TGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
||
CDS-3UTR GCA 90 bp | CATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGCGTGTAGACGGCACCTaGGTCCAGGGCCTCAATGGT | + |
Preference number: 4 (lower is better) Translates to: HGGHDCSLHLEPLLIVQRRVDGT*VQGLNG Trigger: ACCATTGAGGCCCTGGACGCAGGTGCCGTCTACACG...CCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
||
CDS-3UTR GCA 90 bp | TGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCGTGTAGACGGCACCTaGGTCCAGGGCCTCAATGGT | + |
Preference number: 4 (lower is better) Translates to: CSLHLEPLLIVQRVSCHQRVDGT*VQGLNG Trigger: ACCATTGAGGCCCTGGACGCAGGTGCCGTCTACACG...CTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | CTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGCCACACCCTTGGGAATaGCAGCCTTCAGTGTCAGCT | + |
Preference number: 4 (lower is better) Translates to: LHLEPLLIVQRVSCHQQGPHPWE*QPSVSA Trigger: AGCTGACACTGAAGGCTGGCATTCCCAAGGGTGTGG...CCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | CCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGTCCTCCACCACTTTCTaGACAAACTGGTCATGGATG | + |
Preference number: 4 (lower is better) Translates to: PVTSRGPGQELQQLKGAVSSTTF*TNWSWM Trigger: CATCCATGACCAGTTTGTGCAGAAAGTGGTGGAGGA...CACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | AGGCTGGGTGGAGTCCCTGCTGTAGACCCCAGGCTACCATTGTGGCTGTCCAAGGAATCCTCCAAAAGGTaGGGCCACATCGGTCTTGTT | + |
Preference number: 4 (lower is better) Translates to: RLGGVPAVDPRLPLWLSKESSKR*GHIGLV Trigger: AACAAGACCGATGTGGCCGCACCTTTTGGAGGATTC...CTTGGACAGCCACAATGGTAGCCTGGGGTCTACAGCAGGGACTCCACCCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
||
CDS-3UTR CCA 90 bp | AGGCTGGGTGGAGTCCCTGCTGTAGACCCCAGGCTACCATTGTGGCTGTCCAAGTTTCCCATCCTTGTCTaGGATGGTGAACACACCCAC | + |
Preference number: 4 (lower is better) Translates to: RLGGVPAVDPRLPLWLSKFPILV*DGEHTH Trigger: GTGGGTGTGTTCACCATCCCAGACAAGGATGGGAAA...CTTGGACAGCCACAATGGTAGCCTGGGGTCTACAGCAGGGACTCCACCCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CTCCCCAAGTCTCATTTCCTGTTTCTGGGGCGCACCCTCTTCCACAGCCTCTTGCCTGGGCAGCAGAGATaGATGGTAGATGATGGAGCC | + |
Preference number: 4 (lower is better) Translates to: LPKSHFLFLGRTLFHSLLPGQQR*MVDDGA Trigger: GGCTCCATCATCTACCATCCATCTCTGCTGCCCAGG...CAAGAGGCTGTGGAAGAGGGTGCGCCCCAGAAACAGGAAATGAGACTTGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | TTCTGCACAAACTGGTCATGGATGGAGTCCTCCACAAAGAGCCGGCCTGCCGCAATGGCCTCTGCTGGCTaGTCCCAGTTGATCATGGCT | + |
Preference number: 4 (lower is better) Translates to: FCTNWSWMESSTKSRPAAMASAG*SQLIMA Trigger: AGCCATGATCAACTGGGACCAGCCAGCAGAGGCCAT...TGCGGCAGGCCGGCTCTTTGTGGAGGACTCCATCCATGACCAGTTTGTGCAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | CTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGTGAATGGCCTCTGCTaGCTGGTCCCAGTTGATCAT | + |
Preference number: 4 (lower is better) Translates to: LIVQRVSCHQQGSRPRAPVNGLC*LVPVDH Trigger: ATGATCAACTGGGACCAGCCAGCAGAGGCCATTCAC...TGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | CATTCTCAAAGGCCTCCTTCGCTGCTGCCACCGCCTTGTCAACATCACTCACCTGGATCCAGTTGTGAATaGCCTCTGCTGGCTGGTCCC | + |
Preference number: 4 (lower is better) Translates to: HSQRPPSLLPPPCQHHSPGSSCE*PLLAGP Trigger: GGGACCAGCCAGCAGAGGCCATTCACAACTGGATCC...AGGTGAGTGATGTTGACAAGGCGGTGGCAGCAGCGAAGGAGGCCTTTGAGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | CTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGACCCCTTGAAGAACTaGGAGGCTGGCATCATCTTG | + |
Preference number: 4 (lower is better) Translates to: LIVQRVSCHQQGSRPRAPDPLKN*EAGIIL Trigger: CAAGATGATGCCAGCCTCCCAGTTCTTCAAGGGGTC...TGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | AGTGCTGGGGACAGGAGGGTGCTAAGTCACCAGACAGGGTCAGCACTCCCTGAGAAGTATCGGAAGGTCTaGATGGACATGCCCACATGC | + |
Preference number: 4 (lower is better) Translates to: SAGDRRVLSHQTGSALPEKYRKV*MDMPTC Trigger: GCATGTGGGCATGTCCATCCAGACCTTCCGATACTT...CTCAGGGAGTGCTGACCCTGTCTGGTGACTTAGCACCCTCCTGTCCCCAGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CCAAGTCTCATTTCCTGTTTCTGGGGCGCACCCTCTTCCACAGCCTCTTGTACCCGGTTGGGTCTAGCCTaGTTGATGGGGATGGTGGCA | + |
Preference number: 4 (lower is better) Translates to: PSLISCFWGAPSSTASCTRLGLA*LMGMVA Trigger: TGCCACCATCCCCATCAACCAGGCTAGACCCAACCG...GGTACAAGAGGCTGTGGAAGAGGGTGCGCCCCAGAAACAGGAAATGAGACTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGTGAGTGGGGTCACCTaGGCAGGCTTGATCACCACG | + |
Preference number: 4 (lower is better) Translates to: LLTPLGATSDCSEGVLSPVSGVT*AGLITT Trigger: CGTGGTGATCAAGCCTGCCCAGGTGACCCCACTCAC...TGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGTGCTAAGTTTCCTCACATCAGGGTaGTCTGAGAGTCTCTGGCCA | + |
Preference number: 4 (lower is better) Translates to: PRAPAAERSSAGDRRVLSFLTSG*SESLWP Trigger: TGGCCAGAGACTCTCAGACCACCCTGATGTGAGGAA...ACTTAGCACCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | AGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGACTTTCTGCACAAACTaGTCATGGATGGAGTCCTCC | + |
Preference number: 4 (lower is better) Translates to: RVSCHQQGSRPRAPAAERTFCTN*SWMESS Trigger: GGAGGACTCCATCCATGACCAGTTTGTGCAGAAAGT...CCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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3UTR CAA 72 bp | GGAGGAAGTCCGGGATACTACATAGGCCTGAAATCTTaGCGACTGATCCAGGTCACTGCCTGCCTGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: GGSPGYYIGLKS*RLIQVTACLAR Trigger: CCTGGCCAGGCAGGCAGTGACCTGGATCAGTCGCAAAGATTTCAGGCCTATGTAGTATCCCGGACTTCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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3UTR CAA 72 bp | TTCCTCAGGTGGGCCTCATGGTTCTGCGGGCCATGGTaGGTATCTCTGTCCAGGGGGTTGCCGATTTTCATC | + |
Preference number: 4 (lower is better) Translates to: FLRWASWFCGPW*VSLSRGLPIFI Trigger: GATGAAAATCGGCAACCCCCTGGACAGAGATACCAACCATGGCCCGCAGAACCATGAGGCCCACCTGAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR CAA 72 bp | GTGCCCGCCTGCAGTTTGTCACTGACATACAGGGCCTaGTTGATATCCCGAGTGAAGACACCAGAGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: VPACSLSLTYRA*LISRVKTPEAR Trigger: CCTGGCCTCTGGTGTCTTCACTCGGGATATCAACAAGGCCCTGTATGTCAGTGACAAACTGCAGGCGGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR CAA 72 bp | GCCGCCTCTCCCAGGTCTTTGCCAAATCCAGACTGCTaGAATCCTCCAAAAGGTGCGGCCACATCGGTCTTG | + |
Preference number: 4 (lower is better) Translates to: AASPRSLPNPDC*NPPKGAATSVL Trigger: CAAGACCGATGTGGCCGCACCTTTTGGAGGATTCAAGCAGTCTGGATTTGGCAAAGACCTGGGAGAGGCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | CATTCTCAAAGGCCTCCTTCGCTGCTGCCACCGCCTTGTCAACATCACTCACCTCCTTGTCTGGGATGGTaGACACACCCACCACCTCAT | + |
Preference number: 4 (lower is better) Translates to: HSQRPPSLLPPPCQHHSPPCLGW*THPPPH Trigger: ATGAGGTGGTGGGTGTGTTCACCATCCCAGACAAGG...AGGTGAGTGATGTTGACAAGGCGGTGGCAGCAGCGAAGGAGGCCTTTGAGAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | CCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCCTTTCTTATCTCCATaGATGAGGGTCCAGTTGATG | + |
Preference number: 4 (lower is better) Translates to: PVTSRGPGQELQQLKGAVPFLSP*MRVQLM Trigger: CATCAACTGGACCCTCATTCATGGAGATAAGAAAGG...CACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | GACCAAGAGAGGCAGAGCCAAAGAAAGGTGGTAGTGGTTGGCATGCCAAGAAGACCACGGATCCAGTTGTaGATGGCCTCTGCTGGCTGG | + |
Preference number: 4 (lower is better) Translates to: DQERQSQRKVVVVGMPRRPRIQL*MASAGW Trigger: CCAGCCAGCAGAGGCCATTCACAACTGGATCCGTGG...TCTTCTTGGCATGCCAACCACTACCACCTTTCTTTGGCTCTGCCTCTCTTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | GTACATGTGGTCCTCCACGTCTGTGAAAACGGTTGGCTGAAAGAAGAAGCCTGGCCACGGATCCAGTTGTaGATGGCCTCTGCTGGCTGG | + |
Preference number: 4 (lower is better) Translates to: VHVVLHVCENGWLKEEAWPRIQL*MASAGW Trigger: CCAGCCAGCAGAGGCCATTCACAACTGGATCCGTGG...CCAGGCTTCTTCTTTCAGCCAACCGTTTTCACAGACGTGGAGGACCACATGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | CTGAAATCTTTGCGACTGATCCAGGTCACTGCCTGCCTGGCCAGGGGAGTTAGATCCATGGGTATGAACTaGCTGCAGAAGGGGAGCACG | + |
Preference number: 4 (lower is better) Translates to: LKSLRLIQVTACLARGVRSMGMN*LQKGST Trigger: CGTGCTCCCCTTCTGCAGCCAGTTCATACCCATGGA...TCTAACTCCCCTGGCCAGGCAGGCAGTGACCTGGATCAGTCGCAAAGATTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGAATGCCCTCATAGGTaGCTCCTTCCTCAGGCTGGG | + |
Preference number: 4 (lower is better) Translates to: LLTPLGATSDCSEGVLSPECPHR*LLPQAG Trigger: CCCAGCCTGAGGAAGGAGCCACCTATGAGGGCATTC...TGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | GATGGAGTCCTCCACAAAGAGCCGGCCTGCCGCAATGCAGTTCTCCCCTTTGTTGTGAATGGCCTCTGCTaGCTGGTCCCAGTTGATCAT | + |
Preference number: 4 (lower is better) Translates to: DGVLHKEPACRNAVLPFVVNGLC*LVPVDH Trigger: ATGATCAACTGGGACCAGCCAGCAGAGGCCATTCAC...AACAAAGGGGAGAACTGCATTGCGGCAGGCCGGCTCTTTGTGGAGGACTCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | CTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGGATCCAGTTGTGAATaGCCTCTGCTGGCTGGTCCC | + |
Preference number: 4 (lower is better) Translates to: LLTPLGATSDCSEGVLSPGSSCE*PLLAGP Trigger: GGGACCAGCCAGCAGAGGCCATTCACAACTGGATCC...TGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | CCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGTTGCCATCTTCCAGCTaGATATTCTTCACCAGCAAC | + |
Preference number: 4 (lower is better) Translates to: PVTSRGPGQELQQLKGAVLPSSS*IFFTSN Trigger: GTTGCTGGTGAAGAATATCCAGCTGGAAGATGGCAA...CACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | CTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCAGCACGGCCTCTGCTGTaGCCAGCTCCTCCTCGGTCA | + |
Preference number: 4 (lower is better) Translates to: LLTIFIHGGHDCSLHLEPARPLL*PAPPRS Trigger: TGACCGAGGAGGAGCTGGCCACAGCAGAGGCCGTGC...TGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | GGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAGAGTCTTCTACCTCTaGGACATTGGGCAGAATTCG | + |
Preference number: 4 (lower is better) Translates to: GATSDCSEGVLSPAGVQARVFYL*DIGQNS Trigger: CGAATTCTGCCCAATGTCCCAGAGGTAGAAGACTCT...GGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | TCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGTCCCCGAAGGTGGTaGCCATGTAAACATCCTCAT | + |
Preference number: 4 (lower is better) Translates to: SDCSEGVLSPAGVQAKSSSPRRW*PCKHPH Trigger: ATGAGGATGTTTACATGGCCACCACCTTCGGGGACT...GGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCACAACAGGTTCCTTCTTaGTCAAGGTCAGGTTGCGGT | + |
Preference number: 4 (lower is better) Translates to: LIVQRVSCHQQGSRPRAPQQVPS*SRSGCG Trigger: ACCGCAACCTGACCTTGACCAAGAAGGAACCTGTTG...TGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCTTCCTCACATCAGGGTaGTCTGAGAGTCTCTGGCCA | + |
Preference number: 4 (lower is better) Translates to: HLEPLLIVQRVSCHQQGSFLTSG*SESLWP Trigger: TGGCCAGAGACTCTCAGACCACCCTGATGTGAGGAA...GGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | GACTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCACCACAGACCAGTGTaGCCCCTTCCTTCACACCAC | + |
Preference number: 4 (lower is better) Translates to: DCSLHLEPLLIVQRVSCHHHRPV*PLPSHH Trigger: GTGGTGTGAAGGAAGGGGCCACACTGGTCTGTGGTG...GTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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3UTR CAA 72 bp | GGGATGACAATACCACAGACCCCAACAGGTTCCTTCTaGGTCAAGGTCAGGTTGCGGTTGGGTCTAGCCTGG | + |
Preference number: 4 (lower is better) Translates to: GMTIPQTPTGSF*VKVRLRLGLAW Trigger: CCAGGCTAGACCCAACCGCAACCTGACCTTGACCAAGAAGGAACCTGTTGGGGTCTGTGGTATTGTCATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR CAA 72 bp | GTGAAGACACCAGAGGCCAGGCCAAATTCTGTAGCATaGGCCCGAGATAGCACTGCATCCACGTCCCCATCA | + |
Preference number: 4 (lower is better) Translates to: VKTPEARPNSVA*ARDSTASTSPS Trigger: TGATGGGGACGTGGATGCAGTGCTATCTCGGGCCAATGCTACAGAATTTGGCCTGGCCTCTGGTGTCTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | GTGAAGACACCAGAGGCCAGGCCAAATTCTGTAGCATTGGCCCGAGATAGCACTATCAGTCGCACAGCCTaGACCATCCCTTTGATGCCC | + |
Preference number: 4 (lower is better) Translates to: VKTPEARPNSVALARDSTISRTA*TIPLMP Trigger: GGGCATCAAAGGGATGGTTCAGGCTGTGCGACTGAT...AGTGCTATCTCGGGCCAATGCTACAGAATTTGGCCTGGCCTCTGGTGTCTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | GGACTCATGGTGACCACTGCCTCTGGTTCCATACGAGGCATCCATAGACAGAGCGGTCCTCCACGTCTGTaGAAACGGTTGGCTGAAAGA | + |
Preference number: 4 (lower is better) Translates to: GLMVTTASGSIRGIHRQSGPPRL*KRLAER Trigger: TCTTTCAGCCAACCGTTTTCACAGACGTGGAGGACC...GCTCTGTCTATGGATGCCTCGTATGGAACCAGAGGCAGTGGTCACCATGAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | GGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCCAAAAGTCACAGTCTTaGTCCGCAGGTACTCATTCA | + |
Preference number: 4 (lower is better) Translates to: GATSDCSEGVLSPAGVQAQKSQS*SAGTHS Trigger: TGAATGAGTACCTGCGGATCAAGACTGTGACTTTTG...GGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | CTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTGGCCAAACAGGCTCTaGCCGATTACTGCAATCTTC | + |
Preference number: 4 (lower is better) Translates to: LHLEPLLIVQRVSCHQQGWPNRL*PITAIF Trigger: GAAGATTGCAGTAATCGGGCAGAGCCTGTTTGGCCA...CCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | ACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTGGCCAAACAGGCTCTaGCCGATTACTGCAATCTTC | + |
Preference number: 4 (lower is better) Translates to: TSDCSEGVLSPAGVQAKSWPNRL*PITAIF Trigger: GAAGATTGCAGTAATCGGGCAGAGCCTGTTTGGCCA...GCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | CCACCCAGTTTCCTATTCCAACAGCCATGTGGTGGGGTTTACACGGCCCCATCAACGTCACACTCCTTCTaGAGCAGAAGGTCACCAGTG | + |
Preference number: 4 (lower is better) Translates to: PPSFLFQQPCGGVYTAPSTSHSF*SRRSPV Trigger: CACTGGTGACCTTCTGCTGCAGAAGGAGTGTGACGT...TGATGGGGCCGTGTAAACCCCACCACATGGCTGTTGGAATAGGAAACTGGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CCGAAGGACTCCTCCTTAGCGATGTACATGTGGTCCTCCACGTCTGTGAAAACGCCTGGGCAGCAGAGATaGATGGTAGATGATGGAGCC | + |
Preference number: 4 (lower is better) Translates to: PKDSSLAMYMWSSTSVKTPGQQR*MVDDGA Trigger: GGCTCCATCATCTACCATCCATCTCTGCTGCCCAGG...CGTTTTCACAGACGTGGAGGACCACATGTACATCGCTAAGGAGGAGTCCTTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | CCTCTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGAGGCCCCTCGGTGCCTaGGCAGCAGAGATGGATGGT | + |
Preference number: 4 (lower is better) Translates to: PLLTIFIHGGHDCSLHLERPLGA*AAEMDG Trigger: ACCATCCATCTCTGCTGCCCAGGCACCGAGGGGCCT...CTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | GATGGAGTCCTCCACAAAGAGCCGGCCTGCCGCAATGCAGTTCTCCCCTTTGTTCCCTTTGATGCCCTCTaGGAAGAGGAAACGGTTGTA | + |
Preference number: 4 (lower is better) Translates to: DGVLHKEPACRNAVLPFVPFDAL*EEETVV Trigger: TACAACCGTTTCCTCTTCCCAGAGGGCATCAAAGGG...AACAAAGGGGAGAACTGCATTGCGGCAGGCCGGCTCTTTGTGGAGGACTCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | TGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGATGGCCTCTGCTGGCTaGTCCCAGTTGATCATGGCT | + |
Preference number: 4 (lower is better) Translates to: CSLHLEPLLIVQRVSCHQMASAG*SQLIMA Trigger: AGCCATGATCAACTGGGACCAGCCAGCAGAGGCCAT...CTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | CTGAAATCTTTGCGACTGATCCAGGTCACTGCCTGCCTGGCCAGGGGAGTTAGAGTGAATGGCCTCTGCTaGCTGGTCCCAGTTGATCAT | + |
Preference number: 4 (lower is better) Translates to: LKSLRLIQVTACLARGVRVNGLC*LVPVDH Trigger: ATGATCAACTGGGACCAGCCAGCAGAGGCCATTCAC...TCTAACTCCCCTGGCCAGGCAGGCAGTGACCTGGATCAGTCGCAAAGATTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CCACCCAGTTTCCTATTCCAACAGCCATGTGGTGGGGTTTACACGGCCCCATCAGACCCCTTGAAGAACTaGGAGGCTGGCATCATCTTG | + |
Preference number: 4 (lower is better) Translates to: PPSFLFQQPCGGVYTAPSDPLKN*EAGIIL Trigger: CAAGATGATGCCAGCCTCCCAGTTCTTCAAGGGGTC...TGATGGGGCCGTGTAAACCCCACCACATGGCTGTTGGAATAGGAAACTGGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | GTGACCACCCAGTTTCCTATTCCAACAGCCATGTGGTGGGGTTTACACGGCCCCAGTCCCCGAAGGTGGTaGCCATGTAAACATCCTCAT | + |
Preference number: 4 (lower is better) Translates to: VTTQFPIPTAMWWGLHGPSPRRW*PCKHPH Trigger: ATGAGGATGTTTACATGGCCACCACCTTCGGGGACT...GGGGCCGTGTAAACCCCACCACATGGCTGTTGGAATAGGAAACTGGGTGGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGTGGTCTGAGAGTCTCTaGCCAACCAGCGAGCCAGAT | + |
Preference number: 4 (lower is better) Translates to: HGGHDCSLHLEPLLIVQRWSESL*PTSEPD Trigger: ATCTGGCTCGCTGGTTGGCCAGAGACTCTCAGACCA...CCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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3UTR CAA 72 bp | TTCCTGTTTCTGGGGCGCACCCTCTTCCACAGCCTCTaGTACCCATTCTGCTTTTGGAGGTGTGTGATGTGC | + |
Preference number: 4 (lower is better) Translates to: FLFLGRTLFHSL*YPFCFWRCVMC Trigger: GCACATCACACACCTCCAAAAGCAGAATGGGTACAAGAGGCTGTGGAAGAGGGTGCGCCCCAGAAACAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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3UTR CAA 72 bp | ACAAAGAGCCGGCCTGCCGCAATGCAGTTCTCCCCTTaGTTGAAGAAAACGGAGCTCATGCCCATCTGCACA | + |
Preference number: 4 (lower is better) Translates to: TKSRPAAMQFSP*LKKTELMPICT Trigger: TGTGCAGATGGGCATGAGCTCCGTTTTCTTCAACAAAGGGGAGAACTGCATTGCGGCAGGCCGGCTCTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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3UTR CAA 72 bp | TTCTGCGGGCCATGGTTGGTATCTCTGTCCAGGGGGTaGCCGATTTTCATCTTCCCTACTTCCTCCACCACT | + |
Preference number: 4 (lower is better) Translates to: FCGPWLVSLSRG*PIFIFPTSSTT Trigger: AGTGGTGGAGGAAGTAGGGAAGATGAAAATCGGCAACCCCCTGGACAGAGATACCAACCATGGCCCGCAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | CCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGTGCTAAGTCCTTTCTTATCTCCATaGATGAGGGTCCAGTTGATG | + |
Preference number: 4 (lower is better) Translates to: PRAPAAERSSAGDRRVLSPFLSP*MRVQLM Trigger: CATCAACTGGACCCTCATTCATGGAGATAAGAAAGG...ACTTAGCACCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | TGGCCCCTTCCTTCACACCACGTTGGCAATACTCCACCAGCTTCCTCAGGTGGGCCTTTCTTATCTCCATaGATGAGGGTCCAGTTGATG | + |
Preference number: 4 (lower is better) Translates to: WPLPSHHVGNTPPASSGGPFLSP*MRVQLM Trigger: CATCAACTGGACCCTCATTCATGGAGATAAGAAAGG...CCCACCTGAGGAAGCTGGTGGAGTATTGCCAACGTGGTGTGAAGGAAGGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | CTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCATACGGATGCAGCTCCTaGCTTGAAGAAATCTGTAGA | + |
Preference number: 4 (lower is better) Translates to: LIVQRVSCHQQGSRPRAPYGCSS*LEEICR Trigger: TCTACAGATTTCTTCAAGTCAGGAGCTGCATCCGTA...TGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | TGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCCTCCGTGGAGCCTGTaGACCCTATTTTCCTCACAT | + |
Preference number: 4 (lower is better) Translates to: CSLHLEPLLIVQRVSCHQPPWSL*TLFSSH Trigger: ATGTGAGGAAAATAGGGTTCACAGGCTCCACGGAGG...CTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | CTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGGGCACAGCTTTTCATaGTGTGTTTTCCCACCTCCG | + |
Preference number: 4 (lower is better) Translates to: LLTPLGATSDCSEGVLSPGHSFS*CVFPPP Trigger: CGGAGGTGGGAAAACACATCATGAAAAGCTGTGCCC...TGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | CATTCTCAAAGGCCTCCTTCGCTGCTGCCACCGCCTTGTCAACATCACTCACCTAACGGTTGTACAGCGTaGTCACGGTGTCATCTGGAA | + |
Preference number: 4 (lower is better) Translates to: HSQRPPSLLPPPCQHHSPNGCTA*SRCHLE Trigger: TTCCAGATGACACCGTGAGCACGCTGTACAACCGTT...AGGTGAGTGATGTTGACAAGGCGGTGGCAGCAGCGAAGGAGGCCTTTGAGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | CTCCCCAAGTCTCATTTCCTGTTTCTGGGGCGCACCCTCTTCCACAGCCTCTTGAGAAAACGGAGCTCATaGCCATCTGCACAGCTTTGT | + |
Preference number: 4 (lower is better) Translates to: LPKSHFLFLGRTLFHSLLRKRSS*PSAQLC Trigger: ACAAAGCTGTGCAGATGGGCATGAGCTCCGTTTTCT...CAAGAGGCTGTGGAAGAGGGTGCGCCCCAGAAACAGGAAATGAGACTTGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | ACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCTCCACCACTTTCTaGACAAACTGGTCATGGATG | + |
Preference number: 4 (lower is better) Translates to: TSDCSEGVLSPAGVQAKSSSTTF*TNWSWM Trigger: CATCCATGACCAGTTTGTGCAGAAAGTGGTGGAGGA...GCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGCTCACGGTGTCATCTaGAAGCACGTCACACTCCTT | + |
Preference number: 4 (lower is better) Translates to: HGGHDCSLHLEPLLIVQRAHGVI*KHVTLL Trigger: AAGGAGTGTGACGTGCTTCCAGATGACACCGTGAGC...CCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | CCGAAGGACTCCTCCTTAGCGATGTACATGTGGTCCTCCACGTCTGTGAAAACGGCTCACGGTGTCATCTaGAAGCACGTCACACTCCTT | + |
Preference number: 4 (lower is better) Translates to: PKDSSLAMYMWSSTSVKTAHGVI*KHVTLL Trigger: AAGGAGTGTGACGTGCTTCCAGATGACACCGTGAGC...CGTTTTCACAGACGTGGAGGACCACATGTACATCGCTAAGGAGGAGTCCTTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | GTGACCACCCAGTTTCCTATTCCAACAGCCATGTGGTGGGGTTTACACGGCCCCAGAGTCTTCTACCTCTaGGACATTGGGCAGAATTCG | + |
Preference number: 4 (lower is better) Translates to: VTTQFPIPTAMWWGLHGPRVFYL*DIGQNS Trigger: CGAATTCTGCCCAATGTCCCAGAGGTAGAAGACTCT...GGGGCCGTGTAAACCCCACCACATGGCTGTTGGAATAGGAAACTGGGTGGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CCACCCAGTTTCCTATTCCAACAGCCATGTGGTGGGGTTTACACGGCCCCATCACAAACTGGTCATGGATaGAGTCCTCCACAAAGAGCC | + |
Preference number: 4 (lower is better) Translates to: PPSFLFQQPCGGVYTAPSQTGHG*SPPQRA Trigger: GGCTCTTTGTGGAGGACTCCATCCATGACCAGTTTG...TGATGGGGCCGTGTAAACCCCACCACATGGCTGTTGGAATAGGAAACTGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | GGCGACCTCTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTCACCACAGACCAGTGTaGCCCCTTCCTTCACACCAC | + |
Preference number: 4 (lower is better) Translates to: GDLCSQFLFMGDMTAHSTHHRPV*PLPSHH Trigger: GTGGTGTGAAGGAAGGGGCCACACTGGTCTGTGGTG...AGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGGTCGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | GACTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCTGAAAGAAGAAGCCTaGCCTTGGGACTTGGTTCCC | + |
Preference number: 4 (lower is better) Translates to: DCSLHLEPLLIVQRVSCHLKEEA*PWDLVP Trigger: GGGAACCAAGTCCCAAGGCCAGGCTTCTTCTTTCAG...GTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCACTGAAAGAAGAAGCCTaGCCTTGGGACTTGGTTCCC | + |
Preference number: 4 (lower is better) Translates to: LLTPLGATSDCSEGVLSPLKEEA*PWDLVP Trigger: GGGAACCAAGTCCCAAGGCCAGGCTTCTTCTTTCAG...TGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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3UTR CAA 72 bp | CACCCTCTTCCACAGCCTCTTGTACCCATTCTGCTTTaGGAGGTGTGTGATGTGCATTTCCTCCTGTGTCCC | + |
Preference number: 4 (lower is better) Translates to: HPLPQPLVPILL*EVCDVHFLLCP Trigger: GGGACACAGGAGGAAATGCACATCACACACCTCCAAAAGCAGAATGGGTACAAGAGGCTGTGGAAGAGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | TCTGTCCAGGGGGTTGCCGATTTTCATCTTCCCTACTTCCTCCACCACTTTCTGCTGAGCCACCAGTCCTaGAGTGTTGAGTGTCGAGTT | + |
Preference number: 4 (lower is better) Translates to: SVQGVADFHLPYFLHHFLLSHQS*SVECRV Trigger: AACTCGACACTCAACACTTCAGGACTGGTGGCTCAG...CAGAAAGTGGTGGAGGAAGTAGGGAAGATGAAAATCGGCAACCCCCTGGACAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | CATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGTGGCCAAACAGGCTCTaGCCGATTACTGCAATCTTC | + |
Preference number: 4 (lower is better) Translates to: HGGHDCSLHLEPLLIVQRWPNRL*PITAIF Trigger: GAAGATTGCAGTAATCGGGCAGAGCCTGTTTGGCCA...CCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | CTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAAACGGTTGTACAGCGTaGTCACGGTGTCATCTGGAA | + |
Preference number: 4 (lower is better) Translates to: LLTPLGATSDCSEGVLSPNGCTA*SRCHLE Trigger: TTCCAGATGACACCGTGAGCACGCTGTACAACCGTT...TGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | CTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGAGCTCATGCCCATCTaGACAGCTTTGTTGAGGTCA | + |
Preference number: 4 (lower is better) Translates to: LLTPLGATSDCSEGVLSPELMPI*TALLRS Trigger: TGACCTCAACAAAGCTGTGCAGATGGGCATGAGCTC...TGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | GGCGACCTCTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGGCCTCATGGTTCTaGGGGCCATGGTTGGTATCT | + |
Preference number: 4 (lower is better) Translates to: GDLCSQFLFMGDMTAHSTWASWF*GPWLVS Trigger: AGATACCAACCATGGCCCGCAGAACCATGAGGCCCA...AGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGGTCGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | CAGGGAAATGTCAGGCTGGGTGGAGTCCCTGCTGTAGACCCCAGGCTACCATTGTTGCCAAATCCAGACTaGTTGAATCCTCCAAAAGGT | + |
Preference number: 4 (lower is better) Translates to: QGNVRLGGVPAVDPRLPLLPNPD*LNPPKG Trigger: ACCTTTTGGAGGATTCAAGCAGTCTGGATTTGGCAA...CAATGGTAGCCTGGGGTCTACAGCAGGGACTCCACCCAGCCTGACATTTCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | GCAGTGACACAAAGTGTAGGCGACCTCTGCTCACAATTTTTATTCATGGGGGACGAATGCCCTCATAGGTaGCTCCTTCCTCAGGCTGGG | + |
Preference number: 4 (lower is better) Translates to: AVTQSVGDLCSQFLFMGDECPHR*LLPQAG Trigger: CCCAGCCTGAGGAAGGAGCCACCTATGAGGGCATTC...GTCCCCCATGAATAAAAATTGTGAGCAGAGGTCGCCTACACTTTGTGTCACTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CGACCTCTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGACTAGGCCTGGACGATaGGCTCCTGGGATGGGTAGA | + |
Preference number: 4 (lower is better) Translates to: RPLLTIFIHGGHDCSLHLTRPGR*APGMGR Trigger: TCTACCCATCCCAGGAGCCCATCGTCCAGGCCTAGT...CAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGGTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CTCTTGTACCCATTCTGCTTTTGGAGGTGTGTGATGTGCATTTCCTCCTGTGTCACTAGGCCTGGACGATaGGCTCCTGGGATGGGTAGA | + |
Preference number: 4 (lower is better) Translates to: LLYPFCFWRCVMCISSCVTRPGR*APGMGR Trigger: TCTACCCATCCCAGGAGCCCATCGTCCAGGCCTAGT...GACACAGGAGGAAATGCACATCACACACCTCCAAAAGCAGAATGGGTACAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | TTCTGCACAAACTGGTCATGGATGGAGTCCTCCACAAAGAGCCGGCCTGCCGCATTGCCATCTTCCAGCTaGATATTCTTCACCAGCAAC | + |
Preference number: 4 (lower is better) Translates to: FCTNWSWMESSTKSRPAALPSSS*IFFTSN Trigger: GTTGCTGGTGAAGAATATCCAGCTGGAAGATGGCAA...TGCGGCAGGCCGGCTCTTTGTGGAGGACTCCATCCATGACCAGTTTGTGCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | GACTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAACAGGTTCCTTCTTaGTCAAGGTCAGGTTGCGGT | + |
Preference number: 4 (lower is better) Translates to: DCSLHLEPLLIVQRVSCHQQVPS*SRSGCG Trigger: ACCGCAACCTGACCTTGACCAAGAAGGAACCTGTTG...GTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | GGACTCATGGTGACCACTGCCTCTGGTTCCATACGAGGCATCCATAGACAGAGCACTTTCTGCACAAACTaGTCATGGATGGAGTCCTCC | + |
Preference number: 4 (lower is better) Translates to: GLMVTTASGSIRGIHRQSTFCTN*SWMESS Trigger: GGAGGACTCCATCCATGACCAGTTTGTGCAGAAAGT...GCTCTGTCTATGGATGCCTCGTATGGAACCAGAGGCAGTGGTCACCATGAGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | CGACCTCTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGCCTTGTCTGGGATGGTaGACACACCCACCACCTCAT | + |
Preference number: 4 (lower is better) Translates to: RPLLTIFIHGGHDCSLHLPCLGW*THPPPH Trigger: ATGAGGTGGTGGGTGTGTTCACCATCCCAGACAAGG...CAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGGTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | CTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAAGTTCTCCCCTTTGTTaGAGAAAACGGAGCTCATGC | + |
Preference number: 4 (lower is better) Translates to: LLTPLGATSDCSEGVLSPSSPLC*RKRSSC Trigger: GCATGAGCTCCGTTTTCTTCAACAAAGGGGAGAACT...TGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | TTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGGCCCAGGGGATCTaGTTTCCCATCCTTGTCTGG | + |
Preference number: 4 (lower is better) Translates to: FIHGGHDCSLHLEPLLIVQAQGI*FPILVW Trigger: CCAGACAAGGATGGGAAAGCAGATCCCCTGGGCCTG...AACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | CTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAAGAAAACGGAGCTCATaGCCATCTGCACAGCTTTGT | + |
Preference number: 4 (lower is better) Translates to: LLTPLGATSDCSEGVLSPRKRSS*PSAQLC Trigger: ACAAAGCTGTGCAGATGGGCATGAGCTCCGTTTTCT...TGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CCTCTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGTCCATGGGTATGAACTaGCTGCAGAAGGGGAGCACG | + |
Preference number: 4 (lower is better) Translates to: PLLTIFIHGGHDCSLHLESMGMN*LQKGST Trigger: CGTGCTCCCCTTCTGCAGCCAGTTCATACCCATGGA...CTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | TTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTCTGATTGTTGAATGCCCTCATAGGTaGCTCCTTCCTCAGGCTGGG | + |
Preference number: 4 (lower is better) Translates to: FIHGGHDCSLHLEPLLIVECPHR*LLPQAG Trigger: CCCAGCCTGAGGAAGGAGCCACCTATGAGGGCATTC...AACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | CCTCTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGATGGCCTCTGCTGGCTaGTCCCAGTTGATCATGGCT | + |
Preference number: 4 (lower is better) Translates to: PLLTIFIHGGHDCSLHLEMASAG*SQLIMA Trigger: AGCCATGATCAACTGGGACCAGCCAGCAGAGGCCAT...CTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | TTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTCTGATTGTTGGATCCAGTTGTGAATaGCCTCTGCTGGCTGGTCCC | + |
Preference number: 4 (lower is better) Translates to: FIHGGHDCSLHLEPLLIVGSSCE*PLLAGP Trigger: GGGACCAGCCAGCAGAGGCCATTCACAACTGGATCC...AACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | CTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTCCAGGGCCTCAATGGTaGCTAGCTCTTCCTGGTGCT | + |
Preference number: 4 (lower is better) Translates to: LTIFIHGGHDCSLHLEPLPGPQW*LALPGA Trigger: AGCACCAGGAAGAGCTAGCCACCATTGAGGCCCTGG...AAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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3UTR CAA 72 bp | TTGAATCCTCCAAAAGGTGCGGCCACATCGGTCTTGTaGTATGTGTTGACAAACACAGTGCCCGCCTGCAGT | + |
Preference number: 4 (lower is better) Translates to: LNPPKGAATSVL*YVLTNTVPACS Trigger: ACTGCAGGCGGGCACTGTGTTTGTCAACACATACAACAAGACCGATGTGGCCGCACCTTTTGGAGGATTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | GGAGACCTTCTTCACATTACTCAGGGCACAGCTTTTCATGATGTGTTTTCCCACCCTGAACCATCCCTTTaGTGCCCTCTGGGAAGAGGA | + |
Preference number: 4 (lower is better) Translates to: GDLLHITQGTAFHDVFSHPEPSL*CPLGRG Trigger: TCCTCTTCCCAGAGGGCATCAAAGGGATGGTTCAGG...GTGGGAAAACACATCATGAAAAGCTGTGCCCTGAGTAATGTGAAGAAGGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | ACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTCTGATCAGTCGCACAGCCTaGACCATCCCTTTGATGCCC | + |
Preference number: 4 (lower is better) Translates to: TIFIHGGHDCSLHLEPLLISRTA*TIPLMP Trigger: GGGCATCAAAGGGATGGTTCAGGCTGTGCGACTGAT...CAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | GCAGTGACACAAAGTGTAGGCGACCTCTGCTCACAATTTTTATTCATGGGGGACCTGGCTGGTCCCAGTTaGTCATGGCTGTCTCCTTTT | + |
Preference number: 4 (lower is better) Translates to: AVTQSVGDLCSQFLFMGDLAGPS*SWLSPF Trigger: AAAAGGAGACAGCCATGATCAACTGGGACCAGCCAG...GTCCCCCATGAATAAAAATTGTGAGCAGAGGTCGCCTACACTTTGTGTCACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | CTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTGAGCCACCAGTCCTaGAGTGTTGAGTGTCGAGTT | + |
Preference number: 4 (lower is better) Translates to: LLTIFIHGGHDCSLHLEPLSHQS*SVECRV Trigger: AACTCGACACTCAACACTTCAGGACTGGTGGCTCAG...TGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | CATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGTACGGATGCAGCTCCTaGCTTGAAGAAATCTGTAGA | + |
Preference number: 4 (lower is better) Translates to: HGGHDCSLHLEPLLIVQRYGCSS*LEEICR Trigger: TCTACAGATTTCTTCAAGTCAGGAGCTGCATCCGTA...CCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | GGCGACCTCTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTCAAATCCAGACTGCTTaGATCCTCCAAAAGGTGCGG | + |
Preference number: 4 (lower is better) Translates to: GDLCSQFLFMGDMTAHSTQIQTA*ILQKVR Trigger: CCGCACCTTTTGGAGGATTCAAGCAGTCTGGATTTG...AGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGGTCGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | AAGTCTCATTTCCTGTTTCTGGGGCGCACCCTCTTCCACAGCCTCTTGTACCCACAAAAGTCACAGTCTTaGTCCGCAGGTACTCATTCA | + |
Preference number: 4 (lower is better) Translates to: KSHFLFLGRTLFHSLLYPQKSQS*SAGTHS Trigger: TGAATGAGTACCTGCGGATCAAGACTGTGACTTTTG...TGGGTACAAGAGGCTGTGGAAGAGGGTGCGCCCCAGAAACAGGAAATGAGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | CTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCAACGTCACACTCCTTCTaGAGCAGAAGGTCACCAGTG | + |
Preference number: 4 (lower is better) Translates to: LLTIFIHGGHDCSLHLEPTSHSF*SRRSPV Trigger: CACTGGTGACCTTCTGCTGCAGAAGGAGTGTGACGT...TGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | CCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGTGCTAAGTAGTCAGTTTCTTCACTaGCTTTTCCACGTAGTTAAT | + |
Preference number: 4 (lower is better) Translates to: PRAPAAERSSAGDRRVLSSQFLH*LFHVVN Trigger: ATTAACTACGTGGAAAAGGCAGTGAAGAAACTGACT...ACTTAGCACCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | TCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGTCAGTTTCTTCACTaGCTTTTCCACGTAGTTAAT | + |
Preference number: 4 (lower is better) Translates to: SDCSEGVLSPAGVQAKSSSQFLH*LFHVVN Trigger: ATTAACTACGTGGAAAAGGCAGTGAAGAAACTGACT...GGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | ACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTCTGTGGGCCTCATGGTTCTaGGGGCCATGGTTGGTATCT | + |
Preference number: 4 (lower is better) Translates to: TIFIHGGHDCSLHLEPLLWASWF*GPWLVS Trigger: AGATACCAACCATGGCCCGCAGAACCATGAGGCCCA...CAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | GGCGACCTCTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTTTCCCATCCTTGTCTaGGATGGTGAACACACCCAC | + |
Preference number: 4 (lower is better) Translates to: GDLCSQFLFMGDMTAHSTFPILV*DGEHTH Trigger: GTGGGTGTGTTCACCATCCCAGACAAGGATGGGAAA...AGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGGTCGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | AGTGACACAAAGTGTAGGCGACCTCTGCTCACAATTTTTATTCATGGGGGACATCGTCCAGGGCCTCAATaGTGGCTAGCTCTTCCTGGT | + |
Preference number: 4 (lower is better) Translates to: SDTKCRRPLLTIFIHGGHRPGPQ*WLALPG Trigger: ACCAGGAAGAGCTAGCCACCATTGAGGCCCTGGACG...ATGTCCCCCATGAATAAAAATTGTGAGCAGAGGTCGCCTACACTTTGTGTCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTTGGTCTGAGAGTCTCTaGCCAACCAGCGAGCCAGAT | + |
Preference number: 4 (lower is better) Translates to: LTIFIHGGHDCSLHLEPLWSESL*PTSEPD Trigger: ATCTGGCTCGCTGGTTGGCCAGAGACTCTCAGACCA...AAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | TTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCTGAGCCACCAGTCCTaGAGTGTTGAGTGTCGAGTT | + |
Preference number: 4 (lower is better) Translates to: FIHGGHDCSLHLEPLLIVLSHQS*SVECRV Trigger: AACTCGACACTCAACACTTCAGGACTGGTGGCTCAG...AACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR TCA 90 bp | CGACCTCTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGAAAGATGATAAGGGGTaGCTTTCCACCCAGCTCCAG | + |
Preference number: 4 (lower is better) Translates to: RPLLTIFIHGGHDCSLHLKDDKG*LSTQLQ Trigger: CTGGAGCTGGGTGGAAAGTCACCCCTTATCATCTTT...CAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGGTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | ACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTCTGGTTGTGAATGGCCTCTaGTGGCTGGTCCCAGTTGAT | + |
Preference number: 4 (lower is better) Translates to: TIFIHGGHDCSLHLEPLLVVNGL*WLVPVD Trigger: ATCAACTGGGACCAGCCAGCAGAGGCCATTCACAAC...CAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | GGAGACCTTCTTCACATTACTCAGGGCACAGCTTTTCATGATGTGTTTTCCCACGTTGTGAATGGCCTCTaGTGGCTGGTCCCAGTTGAT | + |
Preference number: 4 (lower is better) Translates to: GDLLHITQGTAFHDVFSHVVNGL*WLVPVD Trigger: ATCAACTGGGACCAGCCAGCAGAGGCCATTCACAAC...GTGGGAAAACACATCATGAAAAGCTGTGCCCTGAGTAATGTGAAGAAGGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR GCA 90 bp | CTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCAGAATCCTCCAAAAGGTaGGGCCACATCGGTCTTGTT | + |
Preference number: 4 (lower is better) Translates to: LLTIFIHGGHDCSLHLEPESSKR*GHIGLV Trigger: AACAAGACCGATGTGGCCGCACCTTTTGGAGGATTC...TGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | TGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGTTGCCAAATCCAGACTaGTTGAATCCTCCAAAAGGT | + |
Preference number: 4 (lower is better) Translates to: CSLHLEPLLIVQRVSCHQLPNPD*LNPPKG Trigger: ACCTTTTGGAGGATTCAAGCAGTCTGGATTTGGCAA...CTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | CTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCACAAACTGGTCATGGATaGAGTCCTCCACAAAGAGCC | + |
Preference number: 4 (lower is better) Translates to: LLTIFIHGGHDCSLHLEPQTGHG*SPPQRA Trigger: GGCTCTTTGTGGAGGACTCCATCCATGACCAGTTTG...TGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | CTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCATCTGCACAGCTTTGTTaGGGTCACAGTCAGCAAAGA | + |
Preference number: 4 (lower is better) Translates to: LLTIFIHGGHDCSLHLEPSAQLC*GHSQQR Trigger: TCTTTGCTGACTGTGACCTCAACAAAGCTGTGCAGA...TGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR TCA 90 bp | CTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCAAGTTCTCCCCTTTGTTaGAGAAAACGGAGCTCATGC | + |
Preference number: 4 (lower is better) Translates to: LLTIFIHGGHDCSLHLEPSSPLC*RKRSSC Trigger: GCATGAGCTCCGTTTTCTTCAACAAAGGGGAGAACT...TGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR GCA 90 bp | TTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTCTGATTGTTAACGGTTGTACAGCGTaGTCACGGTGTCATCTGGAA | + |
Preference number: 4 (lower is better) Translates to: FIHGGHDCSLHLEPLLIVNGCTA*SRCHLE Trigger: TTCCAGATGACACCGTGAGCACGCTGTACAACCGTT...AACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CCA 90 bp | GGCGACCTCTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTTGCCATCTTCCAGCTaGATATTCTTCACCAGCAAC | + |
Preference number: 4 (lower is better) Translates to: GDLCSQFLFMGDMTAHSTLPSSS*IFFTSN Trigger: GTTGCTGGTGAAGAATATCCAGCTGGAAGATGGCAA...AGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGGTCGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CCA 90 bp | ACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTCTGAAGTATCGGAAGGTCTaGATGGACATGCCCACATGC | + |
Preference number: 4 (lower is better) Translates to: TIFIHGGHDCSLHLEPLLKYRKV*MDMPTC Trigger: GCATGTGGGCATGTCCATCCAGACCTTCCGATACTT...CAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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3UTR CAA 72 bp | TTGAAGAAAACGGAGCTCATGCCCATCTGCACAGCTTaGTTGAGGTCACAGTCAGCAAAGATGATAAGGGGT | + |
Preference number: 4 (lower is better) Translates to: LKKTELMPICTA*LRSQSAKMIRG Trigger: ACCCCTTATCATCTTTGCTGACTGTGACCTCAACAAAGCTGTGCAGATGGGCATGAGCTCCGTTTTCTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS GCA 90 bp | GGTGGCTCCTTCCTCAGGCTGGGGACGGCGTGGGGCTGTGCCCTCTaGAATCAGTCGCACAGCCTGAACCATCCCTTTGATGCCCTCTGG | + |
Preference number: 5 (lower is better) Translates to: GGSFLRLGTAWGCAL*NQSHSLNHPFDALW Trigger: CCAGAGGGCATCAAAGGGATGGTTCAGGCTGTGCGACTGATTGCAGAGGGCACAGCCCCACGCCGTCCCCAGCCTGAGGAAGGAGCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS CCA 90 bp | AACTGGCTGCAGAAGGGGAGCACGTTGAGTTCTGCACCCAGAGCCTaGTACTTGGCCACGACCTCGGGCAGAGCCTGTCCTCGAGCCCGC | + |
Preference number: 5 (lower is better) Translates to: NWLQKGSTLSSAPRA*YLATTSGRACPRAR Trigger: GCGGGCTCGAGGACAGGCTCTGCCCGAGGTCGTGGCCAAGTACCAGGCTCTGGGTGCAGAACTCAACGTGCTCCCCTTCTGCAGCCAGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000203111.2 ENSMUST00000204796.3 |
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CDS CCA 90 bp | CTGAATGCCCTCATAGGTGGCTCCTTCCTCAGGCTGGGGACGGCGTaGGGCTGTGCCCTCTGCAATCAGTCGCACAGCCTGAACCATCCC | + |
Preference number: 5 (lower is better) Translates to: LNALIGGSFLRLGTA*GCALCNQSHSLNHP Trigger: GGGATGGTTCAGGCTGTGCGACTGATTGCAGAGGGCACAGCCCCACGCCGTCCCCAGCCTGAGGAAGGAGCCACCTATGAGGGCATTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | GGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGTTGGGTCTAGCCTGGTaGATGGGGATGGTGGCACCC | + |
Preference number: 5 (lower is better) Translates to: GPGQELQQLKGAVLGTGGLGLAW*MGMVAP Trigger: GGGTGCCACCATCCCCATCAACCAGGCTAGACCCAA...CCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | AGTGCTGGGGACAGGAGGGTGCTAAGTCACCAGACAGGGTCAGCACTCCCTGAGGCCTGGCCTTGGGACTaGGTTCCCACCACAGACCAG | + |
Preference number: 5 (lower is better) Translates to: SAGDRRVLSHQTGSALPEAWPWD*VPTTDQ Trigger: CTGGTCTGTGGTGGGAACCAAGTCCCAAGGCCAGGC...CTCAGGGAGTGCTGACCCTGTCTGGTGACTTAGCACCCTCCTGTCCCCAGCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | GTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCGTGCCCGCCTGCAGTTaGTCACTGACATACAGGGCC | + |
Preference number: 5 (lower is better) Translates to: VSCHQQGSRPRAPAAERSVPACS*SLTYRA Trigger: GGCCCTGTATGTCAGTGACAAACTGCAGGCGGGCAC...GCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS GCA 90 bp | CTCCATGGGTATGAACTGGCTGCAGAAGGGGAGCACGTTGAGTTCTaGACCCAGAGCCTGGTACTTGGCCACGACCTCGGGCAGAGCCTG | + |
Preference number: 5 (lower is better) Translates to: LHGYELAAEGEHVEF*TQSLVLGHDLGQSL Trigger: CAGGCTCTGCCCGAGGTCGTGGCCAAGTACCAGGCTCTGGGTGCAGAACTCAACGTGCTCCCCTTCTGCAGCCAGTTCATACCCATGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000203111.2 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | CCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGAGGATGAGTCCCGCTTaGGTGACTAGGCCTGGACGA | + |
Preference number: 5 (lower is better) Translates to: PVTSRGPGQELQQLKGAVRMSPA*VTRPGR Trigger: TCGTCCAGGCCTAGTCACCAAAGCGGGACTCATCCT...CACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS TCA 90 bp | TGGGGACGGCGTGGGGCTGTGCCCTCTGCAATCAGTCGCACAGCCTaGACCATCCCTTTGATGCCCTCTGGGAAGAGGAAACGGTTGTAC | + |
Preference number: 5 (lower is better) Translates to: WGRRGAVPSAISRTA*TIPLMPSGKRKRLY Trigger: GTACAACCGTTTCCTCTTCCCAGAGGGCATCAAAGGGATGGTTCAGGCTGTGCGACTGATTGCAGAGGGCACAGCCCCACGCCGTCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | AGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAAGGTCAGGTTGCGGTaGGGTCTAGCCTGGTTGATG | + |
Preference number: 5 (lower is better) Translates to: RVSCHQQGSRPRAPAAERKVRLR*GLAWLM Trigger: CATCAACCAGGCTAGACCCAACCGCAACCTGACCTT...CCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | TCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTTTGGTCAAGGTCAGGTaGCGGTTGGGTCTAGCCTGG | + |
Preference number: 5 (lower is better) Translates to: SCHQQGSRPRAPAAERSSLVKVR*RLGLAW Trigger: CCAGGCTAGACCCAACCGCAACCTGACCTTGACCAA...ACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | TCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTAGAAGAAGCCTGGCCTaGGGACTTGGTTCCCACCAC | + |
Preference number: 5 (lower is better) Translates to: SCHQQGSRPRAPAAERSSRRSLA*GLGSHH Trigger: GTGGTGGGAACCAAGTCCCAAGGCCAGGCTTCTTCT...ACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS TCA 90 bp | GGGCTGTGCCCTCTGCAATCAGTCGCACAGCCTGAACCATCCCTTTaGTGCCCTCTGGGAAGAGGAAACGGTTGTACAGCGTGCTCACGG | + |
Preference number: 5 (lower is better) Translates to: GLCPLQSVAQPEPSL*CPLGRGNGCTACSR Trigger: CCGTGAGCACGCTGTACAACCGTTTCCTCTTCCCAGAGGGCATCAAAGGGATGGTTCAGGCTGTGCGACTGATTGCAGAGGGCACAGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | CCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGTGCTAAGTAGGATGAGTCCCGCTTaGGTGACTAGGCCTGGACGA | + |
Preference number: 5 (lower is better) Translates to: PRAPAAERSSAGDRRVLSRMSPA*VTRPGR Trigger: TCGTCCAGGCCTAGTCACCAAAGCGGGACTCATCCT...ACTTAGCACCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | TCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGGATGAGTCCCGCTTaGGTGACTAGGCCTGGACGA | + |
Preference number: 5 (lower is better) Translates to: SDCSEGVLSPAGVQAKSSRMSPA*VTRPGR Trigger: TCGTCCAGGCCTAGTCACCAAAGCGGGACTCATCCT...GGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS TCA 90 bp | TCTGTCCAGGCACCTGGCACCTTGTCATTCCCACGGATCCAGTTGTaGATGGCCTCTGCTGGCTGGTCCCAGTTGATCATGGCTGTCTCC | + |
Preference number: 5 (lower is better) Translates to: SVQAPGTLSFPRIQL*MASAGWSQLIMAVS Trigger: GGAGACAGCCATGATCAACTGGGACCAGCCAGCAGAGGCCATTCACAACTGGATCCGTGGGAATGACAAGGTGCCAGGTGCCTGGACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | CCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGGAGCTGGTAGGGCATTaGGAGAGTCAGTTTCTTCAC | + |
Preference number: 5 (lower is better) Translates to: PVTSRGPGQELQQLKGAVELVGH*ESQFLH Trigger: GTGAAGAAACTGACTCTCCAAATGCCCTACCAGCTC...CACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
||
CDS-3UTR CAA 90 bp | CCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGTGCTAAGTAAGGTCAGGTTGCGGTaGGGTCTAGCCTGGTTGATG | + |
Preference number: 5 (lower is better) Translates to: PRAPAAERSSAGDRRVLSKVRLR*GLAWLM Trigger: CATCAACCAGGCTAGACCCAACCGCAACCTGACCTT...ACTTAGCACCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | ACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTTGGTCAAGGTCAGGTaGCGGTTGGGTCTAGCCTGG | + |
Preference number: 5 (lower is better) Translates to: TSDCSEGVLSPAGVQAKSLVKVR*RLGLAW Trigger: CCAGGCTAGACCCAACCGCAACCTGACCTTGACCAA...GCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | TCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCCCAACAGGTTCCTTCTaGGTCAAGGTCAGGTTGCGG | + |
Preference number: 5 (lower is better) Translates to: SDCSEGVLSPAGVQAKSSPTGSF*VKVRLR Trigger: CCGCAACCTGACCTTGACCAAGAAGGAACCTGTTGG...GGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | AGTGCTGGGGACAGGAGGGTGCTAAGTCACCAGACAGGGTCAGCACTCCCTGAGATGTTGACCACACCCTaGGGAATGCCAGCCTTCAGT | + |
Preference number: 5 (lower is better) Translates to: SAGDRRVLSHQTGSALPEMLTTP*GMPAFS Trigger: ACTGAAGGCTGGCATTCCCAAGGGTGTGGTCAACAT...CTCAGGGAGTGCTGACCCTGTCTGGTGACTTAGCACCCTCCTGTCCCCAGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS GCA 90 bp | TACAGCGTGCTCACGGTGTCATCTGGAAGCACGTCACACTCCTTCTaGAGCAGAAGGTCACCAGTGTCCAGACCGTCATCAGCCCAGAAG | + |
Preference number: 5 (lower is better) Translates to: YSVLTVSSGSTSHSF*SRRSPVSRPSSAQK Trigger: CTTCTGGGCTGATGACGGTCTGGACACTGGTGACCTTCTGCTGCAGAAGGAGTGTGACGTGCTTCCAGATGACACCGTGAGCACGCTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000203111.2 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | CTGAAATCTTTGCGACTGATCCAGGTCACTGCCTGCCTGGCCAGGGGAGTTAGAGGGAAGAGGAAACGGTaGTACAGCGTGCTCACGGTG | + |
Preference number: 5 (lower is better) Translates to: LKSLRLIQVTACLARGVRGKRKR*YSVLTV Trigger: CACCGTGAGCACGCTGTACAACCGTTTCCTCTTCCC...TCTAACTCCCCTGGCCAGGCAGGCAGTGACCTGGATCAGTCGCAAAGATTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | GGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGACCAGTCCTGAAGTGTaGAGTGTCGAGTTGAAAAAC | + |
Preference number: 5 (lower is better) Translates to: GPGQELQQLKGAVLGTGGTSPEV*SVELKN Trigger: GTTTTTCAACTCGACACTCAACACTTCAGGACTGGT...CCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | TCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCGAGGCTGGCATCATCTaGCCATCTTCCAGCTGGATA | + |
Preference number: 5 (lower is better) Translates to: SDCSEGVLSPAGVQAKSSEAGII*PSSSWI Trigger: TATCCAGCTGGAAGATGGCAAGATGATGCCAGCCTC...GGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | GTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCACATACAGGGCCTTGTaGATATCCCGAGTGAAGACA | + |
Preference number: 5 (lower is better) Translates to: VSCHQQGSRPRAPAAERSTYRAL*ISRVKT Trigger: TGTCTTCACTCGGGATATCAACAAGGCCCTGTATGT...GCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | GACTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACGTGCCCGCCTGCAGTTaGTCACTGACATACAGGGCC | + |
Preference number: 5 (lower is better) Translates to: DCSLHLEPLLIVQRVSCHVPACS*SLTYRA Trigger: GGCCCTGTATGTCAGTGACAAACTGCAGGCGGGCAC...GTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | AGTGCTGGGGACAGGAGGGTGCTAAGTCACCAGACAGGGTCAGCACTCCCTGAGCCAAATCCAGACTGCTaGAATCCTCCAAAAGGTGCG | + |
Preference number: 5 (lower is better) Translates to: SAGDRRVLSHQTGSALPEPNPDC*NPPKGA Trigger: CGCACCTTTTGGAGGATTCAAGCAGTCTGGATTTGG...CTCAGGGAGTGCTGACCCTGTCTGGTGACTTAGCACCCTCCTGTCCCCAGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | GGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGTCAAAAGTCACAGTCTaGATCCGCAGGTACTCATTC | + |
Preference number: 5 (lower is better) Translates to: GPGQELQQLKGAVLGTGGSKVTV*IRRYSF Trigger: GAATGAGTACCTGCGGATCAAGACTGTGACTTTTGA...CCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS TCA 90 bp | ACTAGGCCTGGACGATGGGCTCCTGGGATGGGTAGAGCTTCTCCCTaGGCCACCAGTCCTGAAGTGTTGAGTGTCGAGTTGAAAAACGTC | + |
Preference number: 5 (lower is better) Translates to: TRPGRWAPGMGRASP*ATSPEVLSVELKNV Trigger: GACGTTTTTCAACTCGACACTCAACACTTCAGGACTGGTGGCTCAGGGAGAAGCTCTACCCATCCCAGGAGCCCATCGTCCAGGCCTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS CCA 90 bp | CTCTGGGAAGAGGAAACGGTTGTACAGCGTGCTCACGGTGTCATCTaGAAGCACGTCACACTCCTTCTGCAGCAGAAGGTCACCAGTGTC | + |
Preference number: 5 (lower is better) Translates to: LWEEETVVQRAHGVI*KHVTLLLQQKVTSV Trigger: GACACTGGTGACCTTCTGCTGCAGAAGGAGTGTGACGTGCTTCCAGATGACACCGTGAGCACGCTGTACAACCGTTTCCTCTTCCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS CCA 90 bp | GTTGAAAAACGTCAGCTTCTGCCCACAAGCCTCTGTCCAGGCACCTaGCACCTTGTCATTCCCACGGATCCAGTTGTGAATGGCCTCTGC | + |
Preference number: 5 (lower is better) Translates to: VEKRQLLPTSLCPGT*HLVIPTDPVVNGLC Trigger: GCAGAGGCCATTCACAACTGGATCCGTGGGAATGACAAGGTGCCAGGTGCCTGGACAGAGGCTTGTGGGCAGAAGCTGACGTTTTTCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS CCA 90 bp | TCCTCGGTCAGCTCCAGGGCACTGCTAGCAGACCCCTTGAAGAACTaGGAGGCTGGCATCATCTTGCCATCTTCCAGCTGGATATTCTTC | + |
Preference number: 5 (lower is better) Translates to: SSVSSRALLADPLKN*EAGIILPSSSWIFF Trigger: GAAGAATATCCAGCTGGAAGATGGCAAGATGATGCCAGCCTCCCAGTTCTTCAAGGGGTCTGCTAGCAGTGCCCTGGAGCTGACCGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | CCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGGATGCAGCTCCTGACTaGAAGAAATCTGTAGAGTCT | + |
Preference number: 5 (lower is better) Translates to: PVTSRGPGQELQQLKGAVDAAPD*KKSVES Trigger: AGACTCTACAGATTTCTTCAAGTCAGGAGCTGCATC...CACTGCTCCTTTCAGCTGCTGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | CTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGATGTTGACCACACCCTaGGGAATGCCAGCCTTCAGT | + |
Preference number: 5 (lower is better) Translates to: LHLEPLLIVQRVSCHQQGMLTTP*GMPAFS Trigger: ACTGAAGGCTGGCATTCCCAAGGGTGTGGTCAACAT...CCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS CCA 90 bp | CAGCTCCAGGGCACTGCTAGCAGACCCCTTGAAGAACTGGGAGGCTaGCATCATCTTGCCATCTTCCAGCTGGATATTCTTCACCAGCAA | + |
Preference number: 5 (lower is better) Translates to: QLQGTASRPLEELGG*HHLAIFQLDILHQQ Trigger: TTGCTGGTGAAGAATATCCAGCTGGAAGATGGCAAGATGATGCCAGCCTCCCAGTTCTTCAAGGGGTCTGCTAGCAGTGCCCTGGAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | TCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCGTGTTGAGTGTCGAGTaGAAAAACGTCAGCTTCTGC | + |
Preference number: 5 (lower is better) Translates to: SDCSEGVLSPAGVQAKSSVLSVE*KNVSFC Trigger: GCAGAAGCTGACGTTTTTCAACTCGACACTCAACAC...GGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | CACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCTCTACCTCTGGGACATaGGGCAGAATTCGCATCCAA | + |
Preference number: 5 (lower is better) Translates to: HLEPLLIVQRVSCHQQGSSTSGT*GRIRIQ Trigger: TTGGATGCGAATTCTGCCCAATGTCCCAGAGGTAGA...GGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | TGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCCAACAGGTTCCTTCTaGGTCAAGGTCAGGTTGCGG | + |
Preference number: 5 (lower is better) Translates to: CSLHLEPLLIVQRVSCHQPTGSF*VKVRLR Trigger: CCGCAACCTGACCTTGACCAAGAAGGAACCTGTTGG...CTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | CTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCAATCTGCACAGCTTTGTaGAGGTCACAGTCAGCAAAG | + |
Preference number: 5 (lower is better) Translates to: LIVQRVSCHQQGSRPRAPICTAL*RSQSAK Trigger: CTTTGCTGACTGTGACCTCAACAAAGCTGTGCAGAT...TGGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | CCAAGAGCTCCAGCAGCTGAAAGGAGCAGTGCTGGGGACAGGAGGGTGCTAAGTATGCAGTTCTCCCCTTaGTTGAAGAAAACGGAGCTC | + |
Preference number: 5 (lower is better) Translates to: PRAPAAERSSAGDRRVLSMQFSP*LKKTEL Trigger: GAGCTCCGTTTTCTTCAACAAAGGGGAGAACTGCAT...ACTTAGCACCCTCCTGTCCCCAGCACTGCTCCTTTCAGCTGCTGGAGCTCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | GGCGACCTCTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTTCTGCGGGCCATGGTaGGTATCTCTGTCCAGGGGG | + |
Preference number: 5 (lower is better) Translates to: GDLCSQFLFMGDMTAHSTFCGPW*VSLSRG Trigger: CCCCCTGGACAGAGATACCAACCATGGCCCGCAGAA...AGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGGTCGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | CTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCAGCCTGGCCTTGGGACTaGGTTCCCACCACAGACCAG | + |
Preference number: 5 (lower is better) Translates to: LLTIFIHGGHDCSLHLEPAWPWD*VPTTDQ Trigger: CTGGTCTGTGGTGGGAACCAAGTCCCAAGGCCAGGC...TGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS CCA 90 bp | TGGCACCTTGTCATTCCCACGGATCCAGTTGTGAATGGCCTCTGCTaGCTGGTCCCAGTTGATCATGGCTGTCTCCTTTTTCTGAATGCC | + |
Preference number: 5 (lower is better) Translates to: WHLVIPTDPVVNGLC*LVPVDHGCLLFLNA Trigger: GGCATTCAGAAAAAGGAGACAGCCATGATCAACTGGGACCAGCCAGCAGAGGCCATTCACAACTGGATCCGTGGGAATGACAAGGTGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | TCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGTCCAGGCCAAGAGCTCCACCAGTCCTGAAGTGTaGAGTGTCGAGTTGAAAAAC | + |
Preference number: 5 (lower is better) Translates to: SDCSEGVLSPAGVQAKSSTSPEV*SVELKN Trigger: GTTTTTCAACTCGACACTCAACACTTCAGGACTGGT...GGAGCTCTTGGCCTGGACCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | CTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGAGGCTGGCATCATCTaGCCATCTTCCAGCTGGATA | + |
Preference number: 5 (lower is better) Translates to: LLTPLGATSDCSEGVLSPEAGII*PSSSWI Trigger: TATCCAGCTGGAAGATGGCAAGATGATGCCAGCCTC...TGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | CGACCTCTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGTTGGGTCTAGCCTGGTaGATGGGGATGGTGGCACCC | + |
Preference number: 5 (lower is better) Translates to: RPLLTIFIHGGHDCSLHLLGLAW*MGMVAP Trigger: GGGTGCCACCATCCCCATCAACCAGGCTAGACCCAA...CAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGGTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
||
CDS GCA 90 bp | ACCTGGCACCTTGTCATTCCCACGGATCCAGTTGTGAATGGCCTCTaGTGGCTGGTCCCAGTTGATCATGGCTGTCTCCTTTTTCTGAAT | + |
Preference number: 5 (lower is better) Translates to: TWHLVIPTDPVVNGL*WLVPVDHGCLLFLN Trigger: ATTCAGAAAAAGGAGACAGCCATGATCAACTGGGACCAGCCAGCAGAGGCCATTCACAACTGGATCCGTGGGAATGACAAGGTGCCAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
||
CDS-3UTR CAA 90 bp | TCATCTTCCCTACTTCCTCCACCACTTTCTGCACAAACTGGTCATGGATGGAGTGGGAAGAGGAAACGGTaGTACAGCGTGCTCACGGTG | + |
Preference number: 5 (lower is better) Translates to: SSSLLPPPLSAQTGHGWSGKRKR*YSVLTV Trigger: CACCGTGAGCACGCTGTACAACCGTTTCCTCTTCCC...ACTCCATCCATGACCAGTTTGTGCAGAAAGTGGTGGAGGAAGTAGGGAAGATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | CCACCCAGTTTCCTATTCCAACAGCCATGTGGTGGGGTTTACACGGCCCCATCAGTGTTGAGTGTCGAGTaGAAAAACGTCAGCTTCTGC | + |
Preference number: 5 (lower is better) Translates to: PPSFLFQQPCGGVYTAPSVLSVE*KNVSFC Trigger: GCAGAAGCTGACGTTTTTCAACTCGACACTCAACAC...TGATGGGGCCGTGTAAACCCCACCACATGGCTGTTGGAATAGGAAACTGGGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
||
CDS-3UTR CAA 90 bp | TGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGTCTACCTCTGGGACATaGGGCAGAATTCGCATCCAA | + |
Preference number: 5 (lower is better) Translates to: CSLHLEPLLIVQRVSCHQSTSGT*GRIRIQ Trigger: TTGGATGCGAATTCTGCCCAATGTCCCAGAGGTAGA...CTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | CTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGGATGCAGCTCCTGACTaGAAGAAATCTGTAGAGTCT | + |
Preference number: 5 (lower is better) Translates to: LHLEPLLIVQRVSCHQQGDAAPD*KKSVES Trigger: AGACTCTACAGATTTCTTCAAGTCAGGAGCTGCATC...CCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
||
CDS-3UTR CAA 90 bp | TGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGGAGCTGGTAGGGCATTaGGAGAGTCAGTTTCTTCAC | + |
Preference number: 5 (lower is better) Translates to: CSLHLEPLLIVQRVSCHQELVGH*ESQFLH Trigger: GTGAAGAAACTGACTCTCCAAATGCCCTACCAGCTC...CTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | TTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTCTGATTGTTTTCTGCGGGCCATGGTaGGTATCTCTGTCCAGGGGG | + |
Preference number: 5 (lower is better) Translates to: FIHGGHDCSLHLEPLLIVFCGPW*VSLSRG Trigger: CCCCCTGGACAGAGATACCAACCATGGCCCGCAGAA...AACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
||
CDS-3UTR CAA 90 bp | TACCCATTCTGCTTTTGGAGGTGTGTGATGTGCATTTCCTCCTGTGTCCCACTAAGAAGAAGCCTGGCCTaGGGACTTGGTTCCCACCAC | + |
Preference number: 5 (lower is better) Translates to: YPFCFWRCVMCISSCVPLRRSLA*GLGSHH Trigger: GTGGTGGGAACCAAGTCCCAAGGCCAGGCTTCTTCT...TAGTGGGACACAGGAGGAAATGCACATCACACACCTCCAAAAGCAGAATGGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
||
CDS-3UTR CAA 90 bp | CATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGCTGACATACAGGGCCTaGTTGATATCCCGAGTGAAG | + |
Preference number: 5 (lower is better) Translates to: HGGHDCSLHLEPLLIVQRLTYRA*LISRVK Trigger: CTTCACTCGGGATATCAACAAGGCCCTGTATGTCAG...CCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | CTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGCAGGGGGCCACATCGGTCTTGTaGTATGTGTTGACAAACACA | + |
Preference number: 5 (lower is better) Translates to: LHLEPLLIVQRVSCHQQGATSVL*YVLTNT Trigger: TGTGTTTGTCAACACATACAACAAGACCGATGTGGC...CCCCTGCTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
||
CDS TCA 90 bp | CTTCACCTCCTCCACCAGCCTCACAACATCTACGGATGCAGCTCCTaGCTTGAAGAAATCTGTAGAGTCTTCTACCTCTGGGACATTGGG | + |
Preference number: 5 (lower is better) Translates to: LHLLHQPHNIYGCSS*LEEICRVFYLWDIG Trigger: CCCAATGTCCCAGAGGTAGAAGACTCTACAGATTTCTTCAAGTCAGGAGCTGCATCCGTAGATGTTGTGAGGCTGGTGGAGGAGGTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | ACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTCTGGGGAAGAGGAAACGGTaGTACAGCGTGCTCACGGTG | + |
Preference number: 5 (lower is better) Translates to: TIFIHGGHDCSLHLEPLLGKRKR*YSVLTV Trigger: CACCGTGAGCACGCTGTACAACCGTTTCCTCTTCCC...CAGAAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | CTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCAGCTGGCTGGTCCCAGTaGATCATGGCTGTCTCCTTT | + |
Preference number: 5 (lower is better) Translates to: LLTIFIHGGHDCSLHLEPAGWSQ*IMAVSF Trigger: AAAGGAGACAGCCATGATCAACTGGGACCAGCCAGC...TGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | CTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCACAGTTCTCCCCTTTGTaGAAGAAAACGGAGCTCATG | + |
Preference number: 5 (lower is better) Translates to: LLTPLGATSDCSEGVLSPQFSPL*KKTELM Trigger: CATGAGCTCCGTTTTCTTCAACAAAGGGGAGAACTG...TGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | CTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCAGCCTCTCCCAGGTCTTaGCCAAATCCAGACTGCTTG | + |
Preference number: 5 (lower is better) Translates to: LLTIFIHGGHDCSLHLEPASPRS*PNPDCL Trigger: CAAGCAGTCTGGATTTGGCAAAGACCTGGGAGAGGC...TGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | GACTGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACACCAGTCCTGAAGTGTaGAGTGTCGAGTTGAAAAAC | + |
Preference number: 5 (lower is better) Translates to: DCSLHLEPLLIVQRVSCHTSPEV*SVELKN Trigger: GTTTTTCAACTCGACACTCAACACTTCAGGACTGGT...GTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | CAGCTCCAGGGAGACCTTCTTCACATTACTCAGGGCACAGCTTTTCATGATGTGTCTACCTCTGGGACATaGGGCAGAATTCGCATCCAA | + |
Preference number: 5 (lower is better) Translates to: QLQGDLLHITQGTAFHDVSTSGT*GRIRIQ Trigger: TTGGATGCGAATTCTGCCCAATGTCCCAGAGGTAGA...CACATCATGAAAAGCTGTGCCCTGAGTAATGTGAAGAAGGTCTCCCTGGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | CCTCTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCCATCTGCACAGCTTaGTTGAGGTCACAGTCAGCA | + |
Preference number: 5 (lower is better) Translates to: PLLTIFIHGGHDCSLHLEPICTA*LRSQSA Trigger: TGCTGACTGTGACCTCAACAAAGCTGTGCAGATGGG...CTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | CTCTTGTACCCATTCTGCTTTTGGAGGTGTGTGATGTGCATTTCCTCCTGTGTCCCCATCTGCACAGCTTaGTTGAGGTCACAGTCAGCA | + |
Preference number: 5 (lower is better) Translates to: LLYPFCFWRCVMCISSCVPICTA*LRSQSA Trigger: TGCTGACTGTGACCTCAACAAAGCTGTGCAGATGGG...GACACAGGAGGAAATGCACATCACACACCTCCAAAAGCAGAATGGGTACAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | CTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCATCTCTGTCCAGGGGGTaGCCGATTTTCATCTTCCCT | + |
Preference number: 5 (lower is better) Translates to: LLTIFIHGGHDCSLHLEPSLSRG*PIFIFP Trigger: AGGGAAGATGAAAATCGGCAACCCCCTGGACAGAGA...TGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | TGCTCACTCCACTTGGAGCCACTTCTGATTGTTCAGAGGGTGTCCTGTCACCAGGCCACATCGGTCTTGTaGTATGTGTTGACAAACACA | + |
Preference number: 5 (lower is better) Translates to: CSLHLEPLLIVQRVSCHQATSVL*YVLTNT Trigger: TGTGTTTGTCAACACATACAACAAGACCGATGTGGC...CTGGTGACAGGACACCCTCTGAACAATCAGAAGTGGCTCCAAGTGGAGTGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | CTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTGCCTCTCCCAGGTCTTaGCCAAATCCAGACTGCTTG | + |
Preference number: 5 (lower is better) Translates to: LTIFIHGGHDCSLHLEPLASPRS*PNPDCL Trigger: CAAGCAGTCTGGATTTGGCAAAGACCTGGGAGAGGC...AAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | AGTGACACAAAGTGTAGGCGACCTCTGCTCACAATTTTTATTCATGGGGGACATGCTGGCTGGTCCCAGTaGATCATGGCTGTCTCCTTT | + |
Preference number: 5 (lower is better) Translates to: SDTKCRRPLLTIFIHGGHAGWSQ*IMAVSF Trigger: AAAGGAGACAGCCATGATCAACTGGGACCAGCCAGC...ATGTCCCCCATGAATAAAAATTGTGAGCAGAGGTCGCCTACACTTTGTGTCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | TCTGTCCAGGGGGTTGCCGATTTTCATCTTCCCTACTTCCTCCACCACTTTCTGGATGCAGCTCCTGACTaGAAGAAATCTGTAGAGTCT | + |
Preference number: 5 (lower is better) Translates to: SVQGVADFHLPYFLHHFLDAAPD*KKSVES Trigger: AGACTCTACAGATTTCTTCAAGTCAGGAGCTGCATC...CAGAAAGTGGTGGAGGAAGTAGGGAAGATGAAAATCGGCAACCCCCTGGACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204796.3 |
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CDS-3UTR CAA 90 bp | CTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTTCTCTGTCCAGGGGGTaGCCGATTTTCATCTTCCCT | + |
Preference number: 5 (lower is better) Translates to: LTIFIHGGHDCSLHLEPLSLSRG*PIFIFP Trigger: AGGGAAGATGAAAATCGGCAACCCCCTGGACAGAGA...AAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | TACCCATTCTGCTTTTGGAGGTGTGTGATGTGCATTTCCTCCTGTGTCCCACTACTGACATACAGGGCCTaGTTGATATCCCGAGTGAAG | + |
Preference number: 5 (lower is better) Translates to: YPFCFWRCVMCISSCVPLLTYRA*LISRVK Trigger: CTTCACTCGGGATATCAACAAGGCCCTGTATGTCAG...TAGTGGGACACAGGAGGAAATGCACATCACACACCTCCAAAAGCAGAATGGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | CCTCTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCAAATCCAGACTGCTaGAATCCTCCAAAAGGTGCG | + |
Preference number: 5 (lower is better) Translates to: PLLTIFIHGGHDCSLHLEPNPDC*NPPKGA Trigger: CGCACCTTTTGGAGGATTCAAGCAGTCTGGATTTGG...CTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | GACCAAGAGAGGCAGAGCCAAAGAAAGGTGGTAGTGGTTGGCATGCCAAGAAGATCAAAAGTCACAGTCTaGATCCGCAGGTACTCATTC | + |
Preference number: 5 (lower is better) Translates to: DQERQSQRKVVVVGMPRRSKVTV*IRRYSF Trigger: GAATGAGTACCTGCGGATCAAGACTGTGACTTTTGA...TCTTCTTGGCATGCCAACCACTACCACCTTTCTTTGGCTCTGCCTCTCTTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | CTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCAATCTGCACAGCTTTGTaGAGGTCACAGTCAGCAAAG | + |
Preference number: 5 (lower is better) Translates to: LLTIFIHGGHDCSLHLEPICTAL*RSQSAK Trigger: CTTTGCTGACTGTGACCTCAACAAAGCTGTGCAGAT...TGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | CCTCTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCAGTTCTCCCCTTTGTaGAAGAAAACGGAGCTCATG | + |
Preference number: 5 (lower is better) Translates to: PLLTIFIHGGHDCSLHLEQFSPL*KKTELM Trigger: CATGAGCTCCGTTTTCTTCAACAAAGGGGAGAACTG...CTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | CTGCTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCAACATACAGGGCCTTGTaGATATCCCGAGTGAAGACA | + |
Preference number: 5 (lower is better) Translates to: LLTIFIHGGHDCSLHLEPTYRAL*ISRVKT Trigger: TGTCTTCACTCGGGATATCAACAAGGCCCTGTATGT...TGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS-3UTR CAA 90 bp | CTCACAATTTTTATTCATGGGGGACATGACTGCTCACTCCACTTGGAGCCACTTGTGTTGAGTGTCGAGTaGAAAAACGTCAGCTTCTGC | + |
Preference number: 5 (lower is better) Translates to: LTIFIHGGHDCSLHLEPLVLSVE*KNVSFC Trigger: GCAGAAGCTGACGTTTTTCAACTCGACACTCAACAC...AAGTGGCTCCAAGTGGAGTGAGCAGTCATGTCCCCCATGAATAAAAATTGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS CAA 90 bp | CTGCAGAAGGGGAGCACGTTGAGTTCTGCACCCAGAGCCTGGTACTaGGCCACGACCTCGGGCAGAGCCTGTCCTCGAGCCCGCCACCGA | + |
Preference number: 6 (lower is better) Translates to: LQKGSTLSSAPRAWY*ATTSGRACPRARHR Trigger: TCGGTGGCGGGCTCGAGGACAGGCTCTGCCCGAGGTCGTGGCCAAGTACCAGGCTCTGGGTGCAGAACTCAACGTGCTCCCCTTCTGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000203111.2 ENSMUST00000204796.3 |
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CDS CCA 72 bp | CAGAAGGGGAGCACGTTGAGTTCTGCACCCAGAGCCTaGTACTTGGCCACGACCTCGGGCAGAGCCTGTCCT | + |
Preference number: 6 (lower is better) Translates to: QKGSTLSSAPRA*YLATTSGRACP Trigger: AGGACAGGCTCTGCCCGAGGTCGTGGCCAAGTACCAGGCTCTGGGTGCAGAACTCAACGTGCTCCCCTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000203111.2 ENSMUST00000204796.3 |
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CDS CAA 90 bp | CCATCCTTCTCGGCCTCCAGGCCCAGGGGATCTGCTTTCCCATCCTaGTCTGGGATGGTGAACACACCCACCACCTCATGGCCCTCCTTC | + |
Preference number: 6 (lower is better) Translates to: PSFSASRPRGSAFPS*SGMVNTPTTSWPSF Trigger: GAAGGAGGGCCATGAGGTGGTGGGTGTGTTCACCATCCCAGACAAGGATGGGAAAGCAGATCCCCTGGGCCTGGAGGCCGAGAAGGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS GCA 72 bp | TTCCTCAGGCTGGGGACGGCGTGGGGCTGTGCCCTCTaGAATCAGTCGCACAGCCTGAACCATCCCTTTGAT | + |
Preference number: 6 (lower is better) Translates to: FLRLGTAWGCAL*NQSHSLNHPFD Trigger: ATCAAAGGGATGGTTCAGGCTGTGCGACTGATTGCAGAGGGCACAGCCCCACGCCGTCCCCAGCCTGAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS CAA 72 bp | TCGGCCTCCAGGCCCAGGGGATCTGCTTTCCCATCCTaGTCTGGGATGGTGAACACACCCACCACCTCATGG | + |
Preference number: 6 (lower is better) Translates to: SASRPRGSAFPS*SGMVNTPTTSW Trigger: CCATGAGGTGGTGGGTGTGTTCACCATCCCAGACAAGGATGGGAAAGCAGATCCCCTGGGCCTGGAGGCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS CAA 90 bp | TTGATGACCTCCATGGGTATGAACTGGCTGCAGAAGGGGAGCACGTaGAGTTCTGCACCCAGAGCCTGGTACTTGGCCACGACCTCGGGC | + |
Preference number: 6 (lower is better) Translates to: LMTSMGMNWLQKGST*SSAPRAWYLATTSG Trigger: GCCCGAGGTCGTGGCCAAGTACCAGGCTCTGGGTGCAGAACTCAACGTGCTCCCCTTCTGCAGCCAGTTCATACCCATGGAGGTCATCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000203111.2 ENSMUST00000204796.3 |
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CDS TCA 72 bp | CGTGGGGCTGTGCCCTCTGCAATCAGTCGCACAGCCTaGACCATCCCTTTGATGCCCTCTGGGAAGAGGAAA | + |
Preference number: 6 (lower is better) Translates to: RGAVPSAISRTA*TIPLMPSGKRK Trigger: TTTCCTCTTCCCAGAGGGCATCAAAGGGATGGTTCAGGCTGTGCGACTGATTGCAGAGGGCACAGCCCCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS TCA 72 bp | GGACGATGGGCTCCTGGGATGGGTAGAGCTTCTCCCTaGGCCACCAGTCCTGAAGTGTTGAGTGTCGAGTTG | + |
Preference number: 6 (lower is better) Translates to: GRWAPGMGRASP*ATSPEVLSVEL Trigger: CAACTCGACACTCAACACTTCAGGACTGGTGGCTCAGGGAGAAGCTCTACCCATCCCAGGAGCCCATCGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS CAA 72 bp | TCCATGGGTATGAACTGGCTGCAGAAGGGGAGCACGTaGAGTTCTGCACCCAGAGCCTGGTACTTGGCCACG | + |
Preference number: 6 (lower is better) Translates to: SMGMNWLQKGST*SSAPRAWYLAT Trigger: CGTGGCCAAGTACCAGGCTCTGGGTGCAGAACTCAACGTGCTCCCCTTCTGCAGCCAGTTCATACCCATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000203111.2 ENSMUST00000204796.3 |
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CDS CAA 72 bp | TCCTCGGTCAGCTCCAGGGCACTGCTAGCAGACCCCTaGAAGAACTGGGAGGCTGGCATCATCTTGCCATCT | + |
Preference number: 6 (lower is better) Translates to: SSVSSRALLADP*KNWEAGIILPS Trigger: AGATGGCAAGATGATGCCAGCCTCCCAGTTCTTCAAGGGGTCTGCTAGCAGTGCCCTGGAGCTGACCGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS TCA 72 bp | GCACCTGGCACCTTGTCATTCCCACGGATCCAGTTGTaGATGGCCTCTGCTGGCTGGTCCCAGTTGATCATG | + |
Preference number: 6 (lower is better) Translates to: APGTLSFPRIQL*MASAGWSQLIM Trigger: CATGATCAACTGGGACCAGCCAGCAGAGGCCATTCACAACTGGATCCGTGGGAATGACAAGGTGCCAGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS TCA 72 bp | CCTCTGCAATCAGTCGCACAGCCTGAACCATCCCTTTaGTGCCCTCTGGGAAGAGGAAACGGTTGTACAGCG | + |
Preference number: 6 (lower is better) Translates to: PLQSVAQPEPSL*CPLGRGNGCTA Trigger: CGCTGTACAACCGTTTCCTCTTCCCAGAGGGCATCAAAGGGATGGTTCAGGCTGTGCGACTGATTGCAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS GCA 72 bp | CTCACGGTGTCATCTGGAAGCACGTCACACTCCTTCTaGAGCAGAAGGTCACCAGTGTCCAGACCGTCATCA | + |
Preference number: 6 (lower is better) Translates to: LTVSSGSTSHSF*SRRSPVSRPSS Trigger: TGATGACGGTCTGGACACTGGTGACCTTCTGCTGCAGAAGGAGTGTGACGTGCTTCCAGATGACACCGTGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000203111.2 ENSMUST00000204796.3 |
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CDS CCA 72 bp | GAGGAAACGGTTGTACAGCGTGCTCACGGTGTCATCTaGAAGCACGTCACACTCCTTCTGCAGCAGAAGGTC | + |
Preference number: 6 (lower is better) Translates to: EETVVQRAHGVI*KHVTLLLQQKV Trigger: GACCTTCTGCTGCAGAAGGAGTGTGACGTGCTTCCAGATGACACCGTGAGCACGCTGTACAACCGTTTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS CAA 72 bp | ACCATCCCTTTGATGCCCTCTGGGAAGAGGAAACGGTaGTACAGCGTGCTCACGGTGTCATCTGGAAGCACG | + |
Preference number: 6 (lower is better) Translates to: TIPLMPSGKRKR*YSVLTVSSGST Trigger: CGTGCTTCCAGATGACACCGTGAGCACGCTGTACAACCGTTTCCTCTTCCCAGAGGGCATCAAAGGGATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS TCA 72 bp | GCCCAGAAGATAGTGAAGCCTCCTTTCTTATCTCCATaGATGAGGGTCCAGTTGATGGCTGAGGCCCCTCGG | + |
Preference number: 6 (lower is better) Translates to: AQKIVKPPFLSP*MRVQLMAEAPR Trigger: CCGAGGGGCCTCAGCCATCAACTGGACCCTCATTCATGGAGATAAGAAAGGAGGCTTCACTATCTTCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000203111.2 ENSMUST00000204796.3 |
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CDS GCA 72 bp | CTTGTCATTCCCACGGATCCAGTTGTGAATGGCCTCTaGTGGCTGGTCCCAGTTGATCATGGCTGTCTCCTT | + |
Preference number: 6 (lower is better) Translates to: LVIPTDPVVNGL*WLVPVDHGCLL Trigger: AAGGAGACAGCCATGATCAACTGGGACCAGCCAGCAGAGGCCATTCACAACTGGATCCGTGGGAATGACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS CAA 90 bp | ACCAGCAACATTCTATCATCATTCCCAAAGAGGATGAGTCCCGCTTaGGTGACTAGGCCTGGACGATGGGCTCCTGGGATGGGTAGAGCT | + |
Preference number: 6 (lower is better) Translates to: TSNILSSFPKRMSPA*VTRPGRWAPGMGRA Trigger: AGCTCTACCCATCCCAGGAGCCCATCGTCCAGGCCTAGTCACCAAAGCGGGACTCATCCTCTTTGGGAATGATGATAGAATGTTGCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS CAA 90 bp | GCTCCTGACTTGAAGAAATCTGTAGAGTCTTCTACCTCTGGGACATaGGGCAGAATTCGCATCCAAGAGCTCCGCACGGCCTCTGCTGTG | + |
Preference number: 6 (lower is better) Translates to: APDLKKSVESSTSGT*GRIRIQELRTASAV Trigger: CACAGCAGAGGCCGTGCGGAGCTCTTGGATGCGAATTCTGCCCAATGTCCCAGAGGTAGAAGACTCTACAGATTTCTTCAAGTCAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS CCA 72 bp | GTCATTCCCACGGATCCAGTTGTGAATGGCCTCTGCTaGCTGGTCCCAGTTGATCATGGCTGTCTCCTTTTT | + |
Preference number: 6 (lower is better) Translates to: VIPTDPVVNGLC*LVPVDHGCLLF Trigger: AAAAAGGAGACAGCCATGATCAACTGGGACCAGCCAGCAGAGGCCATTCACAACTGGATCCGTGGGAATGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS CAA 72 bp | TTGAAGAAATCTGTAGAGTCTTCTACCTCTGGGACATaGGGCAGAATTCGCATCCAAGAGCTCCGCACGGCC | + |
Preference number: 6 (lower is better) Translates to: LKKSVESSTSGT*GRIRIQELRTA Trigger: GGCCGTGCGGAGCTCTTGGATGCGAATTCTGCCCAATGTCCCAGAGGTAGAAGACTCTACAGATTTCTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS CAA 90 bp | GCACTGCTAGCAGACCCCTTGAAGAACTGGGAGGCTGGCATCATCTaGCCATCTTCCAGCTGGATATTCTTCACCAGCAACATTCTATCA | + |
Preference number: 6 (lower is better) Translates to: ALLADPLKNWEAGII*PSSSWIFFTSNILS Trigger: TGATAGAATGTTGCTGGTGAAGAATATCCAGCTGGAAGATGGCAAGATGATGCCAGCCTCCCAGTTCTTCAAGGGGTCTGCTAGCAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 ENSMUST00000204796.3 |
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CDS TCA 72 bp | CTCCACCAGCCTCACAACATCTACGGATGCAGCTCCTaGCTTGAAGAAATCTGTAGAGTCTTCTACCTCTGG | + |
Preference number: 6 (lower is better) Translates to: LHQPHNIYGCSS*LEEICRVFYLW Trigger: CCAGAGGTAGAAGACTCTACAGATTTCTTCAAGTCAGGAGCTGCATCCGTAGATGTTGTGAGGCTGGTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |
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CDS CAA 72 bp | ACCAGCCTCACAACATCTACGGATGCAGCTCCTGACTaGAAGAAATCTGTAGAGTCTTCTACCTCTGGGACA | + |
Preference number: 6 (lower is better) Translates to: TSLTTSTDAAPD*KKSVESSTSGT Trigger: TGTCCCAGAGGTAGAAGACTCTACAGATTTCTTCAAGTCAGGAGCTGCATCCGTAGATGTTGTGAGGCTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032175.11 ENSMUST00000130418.8 |