Pregenerated sensors for ALDH1A7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024747Ensembl transcript IDs: ENSMUST00000025656.4
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TACGTAGTTCAAGGAATCAGTGTGGGACAGAGCTTAAATCAGGACTaGTCCTCCTTGCCAAGTGTGTACTCTAGACAAGTAGCTACAATG | + |
|
Preference number: 1 (lower is better) Translates to: YVVQGISVGQSLNQD*SSLPSVYSRQVATM Trigger: CATTGTAGCTACTTGTCTAGAGTACACACTTGGCAAGGAGGACCAGTCCTGATTTAAGCTCTGTCCCACACTGATTCCTTGAACTACGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| 3UTR TCA 90 bp | GCCTTTATTAAGCTTTGCATTCGAATTACAGGGAGGCATTTCATTTaGCAAGCAGTCATGGCATTCTGGAAAATATTTCACAACACTCAG | + |
|
Preference number: 1 (lower is better) Translates to: AFIKLCIRITGRHFI*QAVMAFWKIFHNTQ Trigger: CTGAGTGTTGTGAAATATTTTCCAGAATGCCATGACTGCTTGTCAAATGAAATGCCTCCCTGTAATTCGAATGCAAAGCTTAATAAAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| 3UTR-3UTR TCA 90 bp | CCCCGAGGAATAGAGCAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAATGTACAGCCACTGCTaGGAGTTTCTCTTCACTCTG | + |
|
Preference number: 2 (lower is better) Translates to: PRGIEQLTFQLSCMVRSSMYSHC*EFLFTL Trigger: CAGAGTGAAGAGAAACTCTCAGCAGTGGCTGTACAT...TGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTGCTCTATTCCTCGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| 3UTR-3UTR TCA 90 bp | TTTGCATTCGAATTACAGGGAGGCATTTCATTTGACAAGCAGTCATGGCATTCTTTTCTGGTGACTGTATaGGATGTACAGCCACTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: FAFELQGGISFDKQSWHSFLVTV*DVQPLL Trigger: CAGCAGTGGCTGTACATCTCATACAGTCACCAGAAA...AGAATGCCATGACTGCTTGTCAAATGAAATGCCTCCCTGTAATTCGAATGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| 3UTR-3UTR CCA 90 bp | CCCCGAGGAATAGAGCAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCATTCTGGGATATGAATTaGGTTCACGGATTAGAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: PRGIEQLTFQLSCMVRSSFWDMN*VHGLED Trigger: GTCTTCTAATCCGTGAACCCAATTCATATCCCAGAA...TGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTGCTCTATTCCTCGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| 3UTR-3UTR CCA 90 bp | GGAATAGAGCAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAAGGAATAGCTTAAATCAGGACTaGTCCTCCTTGCCAAGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GIEQLTFQLSCMVRSSRNSLNQD*SSLPSV Trigger: CACACTTGGCAAGGAGGACCAGTCCTGATTTAAGCT...ATTCCTTGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTGCTCTATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| 3UTR-3UTR CCA 90 bp | TTTGCATTCGAATTACAGGGAGGCATTTCATTTGACAAGCAGTCATGGCATTCTTGTATCCTTTTGTTCTaGGATATGAATTGGGTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: FAFELQGGISFDKQSWHSCILLF*DMNWVH Trigger: GTGAACCCAATTCATATCCCAGAACAAAAGGATACA...AGAATGCCATGACTGCTTGTCAAATGAAATGCCTCCCTGTAATTCGAATGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| 3UTR CCA 72 bp | CAAGGAATCAGTGTGGGACAGAGCTTAAATCAGGACTaGTCCTCCTTGCCAAGTGTGTACTCTAGACAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: QGISVGQSLNQD*SSLPSVYSRQV Trigger: TACTTGTCTAGAGTACACACTTGGCAAGGAGGACCAGTCCTGATTTAAGCTCTGTCCCACACTGATTCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| 3UTR GCA 72 bp | CCCCGAGGAATAGAGCAGCTAACTTTTCAGTTATCATaGATGGTACGTAGTTCAAGGAATCAGTGTGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: PRGIEQLTFQLS*MVRSSRNQCGT Trigger: TGTCCCACACTGATTCCTTGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTGCTCTATTCCTCGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGGACTGGTCCTCCTTGCCAAGTGTGTACTCTAGACAAGTAGCTACAATGGAAAGAGTTACAGAGAGCTaGCACCTTAATGTATCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QDWSSLPSVYSRQVATMERVTES*HLNVSF Trigger: AAAGGATACATTAAGGTGCAAGCTCTCTGTAACTCT...TTCCATTGTAGCTACTTGTCTAGAGTACACACTTGGCAAGGAGGACCAGTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| 3UTR GCA 72 bp | GGAAAGCACCTTATCATGACAGAGTTACAGAGAGCTTaGACCTTAATGTATCCTTTTGTTCTGGGATATGAA | + |
|
Preference number: 3 (lower is better) Translates to: GKHLIMTELQRA*TLMYPFVLGYE Trigger: TTCATATCCCAGAACAAAAGGATACATTAAGGTGCAAGCTCTCTGTAACTCTGTCATGATAAGGTGCTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CCA 90 bp | GCATTCGAATTACAGGGAGGCATTTCATTTGACAAGCAGTCATGGCATTCTGGACCATGTGGGAGGAGATaGCTCCCCCTGCAGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AFELQGGISFDKQSWHSGPCGRR*LPLQLA Trigger: GGCCAACTGCAGGGGGAGCCATCTCCTCCCACATGG...TCCAGAATGCCATGACTGCTTGTCAAATGAAATGCCTCCCTGTAATTCGAATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR GCA 90 bp | CAGGACTGGTCCTCCTTGCCAAGTGTGTACTCTAGACAAGTAGCTACAATGGAACTGGAAAGCCTGTCTTaGGGCCTTCACAGCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QDWSSLPSVYSRQVATMELESLS*GLHSFV Trigger: GACAAAGCTGTGAAGGCCGCAAGACAGGCTTTCCAG...TTCCATTGTAGCTACTTGTCTAGAGTACACACTTGGCAAGGAGGACCAGTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CCA 90 bp | GCATTCGAATTACAGGGAGGCATTTCATTTGACAAGCAGTCATGGCATTCTGGAGGCTCCCCCTGCAGTTaGCCCATAACCAGGGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: AFELQGGISFDKQSWHSGGSPCS*PITRDN Trigger: ATTGTCCCTGGTTATGGGCCAACTGCAGGGGGAGCC...TCCAGAATGCCATGACTGCTTGTCAAATGAAATGCCTCCCTGTAATTCGAATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR GCA 90 bp | TTTGCATTCGAATTACAGGGAGGCATTTCATTTGACAAGCAGTCATGGCATTCTGGAGATGGCTCCCCCTaGAGTTGGCCCATAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FAFELQGGISFDKQSWHSGDGSP*SWPITR Trigger: CCTGGTTATGGGCCAACTGCAGGGGGAGCCATCTCC...AGAATGCCATGACTGCTTGTCAAATGAAATGCCTCCCTGTAATTCGAATGCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR GCA 90 bp | GCATTCGAATTACAGGGAGGCATTTCATTTGACAAGCAGTCATGGCATTCTGGACACACCATCCCAGCCTaGAGAGCAGATGACACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AFELQGGISFDKQSWHSGHTIPA*RADDTV Trigger: CACTGTGTCATCTGCTCTGCAGGCTGGGATGGTGTG...TCCAGAATGCCATGACTGCTTGTCAAATGAAATGCCTCCCTGTAATTCGAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR TCA 90 bp | TGGTCCTCCTTGCCAAGTGTGTACTCTAGACAAGTAGCTACAATGGAAAGCACCTCCAACAGGTATGCATaGGCAAAGACTTTCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WSSLPSVYSRQVATMESTSNRYA*AKTFPA Trigger: TGCTGGGAAAGTCTTTGCTCATGCATACCTGTTGGA...GGTGCTTTCCATTGTAGCTACTTGTCTAGAGTACACACTTGGCAAGGAGGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR TCA 90 bp | CAGGACTGGTCCTCCTTGCCAAGTGTGTACTCTAGACAAGTAGCTACAATGGAACCTCTGTTGATCCTGTaGAGGACACTTTGTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: QDWSSLPSVYSRQVATMEPLLIL*RTLCRC Trigger: ACATCGACAAAGTGTCCTTCACAGGATCAACAGAGG...TTCCATTGTAGCTACTTGTCTAGAGTACACACTTGGCAAGGAGGACCAGTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR TCA 90 bp | CAGGACTGGTCCTCCTTGCCAAGTGTGTACTCTAGACAAGTAGCTACAATGGAATTTGCCAACCTCTGTTaGTCCTGTGAAGGACACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QDWSSLPSVYSRQVATMEFANLC*SCEGHF Trigger: AAAGTGTCCTTCACAGGATCAACAGAGGTTGGCAAA...TTCCATTGTAGCTACTTGTCTAGAGTACACACTTGGCAAGGAGGACCAGTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR GCA 90 bp | CAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAAGGAATCAGTGTGGGGCTGTGAGAGGAGTTTaGTCTGCTGGCTTGACAACC | + |
|
Preference number: 4 (lower is better) Translates to: QLTFQLSCMVRSSRNQCGAVRGV*SAGLTT Trigger: GGTTGTCAAGCCAGCAGAGCAAACTCCTCTCACAGC...CCCACACTGATTCCTTGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CCA 90 bp | AAAACACCACTTTCTGGTGACTGTATGAGATGTACAGCCACTGCTGAGAGTTTCGGTATTGTTTGGCCATaGATCTTGTCAGCCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTPLSGDCMRCTATAESFGIVWP*ILSAQP Trigger: AGGCTGGGCTGACAAGATCCATGGCCAAACAATACC...GAAACTCTCAGCAGTGGCTGTACATCTCATACAGTCACCAGAAAGTGGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CCA 90 bp | TGGTCCTCCTTGCCAAGTGTGTACTCTAGACAAGTAGCTACAATGGAAAGCACCCCTCAACAAAAAGCCTaGACGCTGCAACACAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: WSSLPSVYSRQVATMESTPQQKA*TLQHKS Trigger: AGATTTGTGTTGCAGCGTCCAGGCTTTTTGTTGAGG...GGTGCTTTCCATTGTAGCTACTTGTCTAGAGTACACACTTGGCAAGGAGGACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR TCA 90 bp | CAGGACTGGTCCTCCTTGCCAAGTGTGTACTCTAGACAAGTAGCTACAATGGAACACGCCTTGTATAAGTaGATATGTTTCCATCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QDWSSLPSVYSRQVATMEHALYK*ICFHHW Trigger: CCAGTGATGGAAACATATTCACTTATACAAGGCGTG...TTCCATTGTAGCTACTTGTCTAGAGTACACACTTGGCAAGGAGGACCAGTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR GCA 90 bp | CCCCGAGGAATAGAGCAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAGGACAGGAAATTTCTTaGTGCTCACCGAATCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRGIEQLTFQLSCMVRSSGQEIS*CSPNHA Trigger: GGCATGATTCGGTGAGCAGCAAGAAATTTCCTGTCC...TGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTGCTCTATTCCTCGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR GCA 90 bp | CAGGACTGGTCCTCCTTGCCAAGTGTGTACTCTAGACAAGTAGCTACAATGGAATACATCCAACAGGTATaGATGAGCAAAGACTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QDWSSLPSVYSRQVATMEYIQQV*MSKDFP Trigger: GGGAAAGTCTTTGCTCATGCATACCTGTTGGATGTA...TTCCATTGTAGCTACTTGTCTAGAGTACACACTTGGCAAGGAGGACCAGTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR GCA 90 bp | CAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAAGGAATCAGTGTGGGGAGAGGAGTTTGCTCTaGTGGCTTGACAACCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: QLTFQLSCMVRSSRNQCGERSLL*WLDNHS Trigger: ACTGTGGTTGTCAAGCCAGCAGAGCAAACTCCTCTC...CCCACACTGATTCCTTGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CCA 90 bp | AAGAACTCAACAGAAGAAGAACTTATAGCAAAACACCACTTTCTGGTGACTGTAATCCATGGTGCGCCATaGGGAGCCAATCTGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KNSTEEELIAKHHFLVTVIHGAP*GANLES Trigger: GCTTTCCAGATTGGCTCCCCATGGCGCACCATGGAT...TACAGTCACCAGAAAGTGGTGTTTTGCTATAAGTTCTTCTTCTGTTGAGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CCA 90 bp | AAGAACTCAACAGAAGAAGAACTTATAGCAAAACACCACTTTCTGGTGACTGTATCTCTGAAGCATCCATaGTGCGCCATGGGGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KNSTEEELIAKHHFLVTVSLKHP*CAMGSQ Trigger: TTGGCTCCCCATGGCGCACCATGGATGCTTCAGAGA...TACAGTCACCAGAAAGTGGTGTTTTGCTATAAGTTCTTCTTCTGTTGAGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CCA 90 bp | GGAATAGAGCAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAAGGAATCTTGAATCCACCAAATaGGCATTGGACAGGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GIEQLTFQLSCMVRSSRNLESTK*ALDRDS Trigger: GCTGTCCCTGTCCAATGCCCATTTGGTGGATTCAAG...ATTCCTTGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTGCTCTATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR TCA 90 bp | CCCCGAGGAATAGAGCAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAGTAATGCTTTTATGCTaGTCTCTACATCCAACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRGIEQLTFQLSCMVRSSVMLLC*SLHPTG Trigger: ACCTGTTGGATGTAGAGATCAGCATAAAAGCATTAC...TGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTGCTCTATTCCTCGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR TCA 90 bp | TTAAAGAACTCAACAGAAGAAGAACTTATAGCAAAACACCACTTTCTGGTGACTCCATGTGAAGAGCTGTaGGAGGAGTTTGCTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKNSTEEELIAKHHFLVTPCEEL*EEFALL Trigger: CAGCAGAGCAAACTCCTCTCACAGCTCTTCACATGG...AGTCACCAGAAAGTGGTGTTTTGCTATAAGTTCTTCTTCTGTTGAGTTCTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR TCA 90 bp | GGAATAGAGCAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAAGGAATTCCCTGCAGCTTCCTTaGTTAATTTGCCAACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GIEQLTFQLSCMVRSSRNSLQLP*LICQPL Trigger: CAGAGGTTGGCAAATTAATCAAGGAAGCTGCAGGGA...ATTCCTTGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTGCTCTATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR GCA 90 bp | GGAATAGAGCAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAAGGAATGATGACCTCCTCAGTTaGAGGGTTAAGGACAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GIEQLTFQLSCMVRSSRNDDLLS*RVKDRK Trigger: TTTCCTGTCCTTAACCCTGCAACTGAGGAGGTCATC...ATTCCTTGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTGCTCTATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR GCA 90 bp | GGAATAGAGCAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAAGGAATTCTCCTCTTTGGCAATaGGCATCTCATCAGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GIEQLTFQLSCMVRSSRNSPLWQ*ASHQSH Trigger: ATGTGACTGATGAGATGCGCATTGCCAAAGAGGAGA...ATTCCTTGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTGCTCTATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CCA 90 bp | AAGAACTCAACAGAAGAAGAACTTATAGCAAAACACCACTTTCTGGTGACTGTATCACTGGGTATTGTTTaGCCATGGATCTTGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KNSTEEELIAKHHFLVTVSLGIV*PWILSA Trigger: GGCTGACAAGATCCATGGCCAAACAATACCCAGTGA...TACAGTCACCAGAAAGTGGTGTTTTGCTATAAGTTCTTCTTCTGTTGAGTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CCA 90 bp | GGAATAGAGCAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAAGGAATGAGAAGACTGTGGGTTaGACAAAGAAGCCTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GIEQLTFQLSCMVRSSRNEKTVG*TKKPLF Trigger: GAACAAAGGCTTCTTTGTCCAACCCACAGTCTTCTC...ATTCCTTGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTGCTCTATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR TCA 90 bp | GGAATAGAGCAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAAGGAATATTAAAGATGCCATGTaGAGAGCTGTGAGAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GIEQLTFQLSCMVRSSRNIKDAM*RAVRGV Trigger: AACTCCTCTCACAGCTCTTCACATGGCATCTTTAAT...ATTCCTTGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTGCTCTATTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CCA 90 bp | GCATTCGAATTACAGGGAGGCATTTCATTTGACAAGCAGTCATGGCATTCTGGAAGTGAATATAATCAATaGACCATTCCAAGGGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: AFELQGGISFDKQSWHSGSEYNQ*TIPRDD Trigger: ATCATCCCTTGGAATGGTCCATTGATTATATTCACT...TCCAGAATGCCATGACTGCTTGTCAAATGAAATGCCTCCCTGTAATTCGAATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CCA 90 bp | AAGAACTCAACAGAAGAAGAACTTATAGCAAAACACCACTTTCTGGTGACTGTATCTCATCAGTCACATTaGAGAAGACTGTGGGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KNSTEEELIAKHHFLVTVSHQSH*RRLWVG Trigger: TCCAACCCACAGTCTTCTCCAATGTGACTGATGAGA...TACAGTCACCAGAAAGTGGTGTTTTGCTATAAGTTCTTCTTCTGTTGAGTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR GCA 90 bp | GGAATAGAGCAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAAGGAATCTGAGATATTTGCATTaGAACTGTCTTGAGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GIEQLTFQLSCMVRSSRNLRYLH*NCLELS Trigger: ACTGAGCTCAAGACAGTTGCAATGCAAATATCTCAG...ATTCCTTGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTGCTCTATTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR GCA 90 bp | TTAAAGAACTCAACAGAAGAAGAACTTATAGCAAAACACCACTTTCTGGTGACTCAGGAAATTTCTTGCTaGTCACCGAATCATGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LKNSTEEELIAKHHFLVTQEISC*SPNHAI Trigger: AATGGCATGATTCGGTGAGCAGCAAGAAATTTCCTG...AGTCACCAGAAAGTGGTGTTTTGCTATAAGTTCTTCTTCTGTTGAGTTCTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR TCA 90 bp | AAGAACTCAACAGAAGAAGAACTTATAGCAAAACACCACTTTCTGGTGACTGTATCTTCCCACTCTCAATaGGACCAAGTATTTTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNSTEEELIAKHHFLVTVSSHSQ*DQVFYC Trigger: ACAATAAAATACTTGGTCTCATTGAGAGTGGGAAGA...TACAGTCACCAGAAAGTGGTGTTTTGCTATAAGTTCTTCTTCTGTTGAGTTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR GCA 90 bp | AAGAACTCAACAGAAGAAGAACTTATAGCAAAACACCACTTTCTGGTGACTGTAATAGGTAGTGTTGTTTaGTCTCTTGATCACATCATC | + |
|
Preference number: 4 (lower is better) Translates to: KNSTEEELIAKHHFLVTVIGSVV*SLDHII Trigger: GATGATGTGATCAAGAGAGCAAACAACACTACCTAT...TACAGTCACCAGAAAGTGGTGTTTTGCTATAAGTTCTTCTTCTGTTGAGTTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS TCA 90 bp | AGCCAAATAGCAGTTCACCCACACCATCCCAGCCTGCAGAGCAGATaGCACAGTGATGGCCTTATCCAGGTCTTTAGTGAAGACTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SQIAVHPHHPSLQSR*HSDGLIQVFSEDSC Trigger: GCAGGAGTCTTCACTAAAGACCTGGATAAGGCCATCACTGTGTCATCTGCTCTGCAGGCTGGGATGGTGTGGGTGAACTGCTATTTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS CCA 90 bp | GCCTTCACAGCTTTGTCAACATCAGCCTTGTCCCCTTCTTCCACGTaGCAGATGACCTCCTCAGTTGCAGGGTTAAGGACAGGAAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: AFTALSTSALSPSST*QMTSSVAGLRTGNF Trigger: GAAATTTCCTGTCCTTAACCCTGCAACTGAGGAGGTCATCTGCCACGTGGAAGAAGGGGACAAGGCTGATGTTGACAAAGCTGTGAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | GCATTCGAATTACAGGGAGGCATTTCATTTGACAAGCAGTCATGGCATTCTGGATGGCTCCCCCTGCAGTaGGCCCATAACCAGGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: AFELQGGISFDKQSWHSGWLPLQ*AHNQGQ Trigger: TTGTCCCTGGTTATGGGCCAACTGCAGGGGGAGCCA...TCCAGAATGCCATGACTGCTTGTCAAATGAAATGCCTCCCTGTAATTCGAATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | CAGGACTGGTCCTCCTTGCCAAGTGTGTACTCTAGACAAGTAGCTACAATGGAATCTGGAAAGCCTGTCTaGCGGCCTTCACAGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QDWSSLPSVYSRQVATMESGKPV*RPSQLC Trigger: ACAAAGCTGTGAAGGCCGCAAGACAGGCTTTCCAGA...TTCCATTGTAGCTACTTGTCTAGAGTACACACTTGGCAAGGAGGACCAGTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | TGGTCCTCCTTGCCAAGTGTGTACTCTAGACAAGTAGCTACAATGGAAAGCACCATTCCAAGGGATGATTaGGCCACACACCCCAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: WSSLPSVYSRQVATMESTIPRDD*ATHPNR Trigger: CCTATTGGGGTGTGTGGCCAAATCATCCCTTGGAAT...GGTGCTTTCCATTGTAGCTACTTGTCTAGAGTACACACTTGGCAAGGAGGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | GCATTCGAATTACAGGGAGGCATTTCATTTGACAAGCAGTCATGGCATTCTGGATGGACAAAGAAGCCTTaGTTCCCCCAGCGACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AFELQGGISFDKQSWHSGWTKKP*FPQRPP Trigger: TGGAGGTCGCTGGGGGAACAAAGGCTTCTTTGTCCA...TCCAGAATGCCATGACTGCTTGTCAAATGAAATGCCTCCCTGTAATTCGAATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | TGGTCCTCCTTGCCAAGTGTGTACTCTAGACAAGTAGCTACAATGGAAAGCACCAGGACAGGAAATTTCTaGCTGCTCACCGAATCATGC | + |
|
Preference number: 5 (lower is better) Translates to: WSSLPSVYSRQVATMESTRTGNF*LLTESC Trigger: GCATGATTCGGTGAGCAGCAAGAAATTTCCTGTCCT...GGTGCTTTCCATTGTAGCTACTTGTCTAGAGTACACACTTGGCAAGGAGGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | CCCCGAGGAATAGAGCAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCATTGTCAACATCAGCCTaGTCCCCTTCTTCCACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PRGIEQLTFQLSCMVRSSLSTSA*SPSSTW Trigger: CCACGTGGAAGAAGGGGACAAGGCTGATGTTGACAA...TGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTGCTCTATTCCTCGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS TCA 90 bp | GGATCTTGTCAGCCCAGCCTGCGAAGTACTGTAATGCTTTTATGCTaGTCTCTACATCCAACAGGTATGCATGAGCAAAGACTTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSCQPSLRSTVMLLC*SLHPTGMHEQRLSQ Trigger: CTGGGAAAGTCTTTGCTCATGCATACCTGTTGGATGTAGAGATCAGCATAAAAGCATTACAGTACTTCGCAGGCTGGGCTGACAAGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | CAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAAGGAATCAGTGTGGGGTTTGCTCTGCTGGCTaGACAACCACAGTGTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QLTFQLSCMVRSSRNQCGVCSAG*TTTVFP Trigger: TGGGAACACTGTGGTTGTCAAGCCAGCAGAGCAAAC...CCCACACTGATTCCTTGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | AAAACACCACTTTCTGGTGACTGTATGAGATGTACAGCCACTGCTGAGAGTTTCGTGACTCTCTTCAGATaGCTTTTCCCTGCAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KTPLSGDCMRCTATAESFVTLFR*LFPAAS Trigger: GGAAGCTGCAGGGAAAAGCAATCTGAAGAGAGTCAC...GAAACTCTCAGCAGTGGCTGTACATCTCATACAGTCACCAGAAAGTGGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | AAAGAACTCAACAGAAGAAGAACTTATAGCAAAACACCACTTTCTGGTGACTGTGTTTGGCCATGGATCTaGTCAGCCCAGCCTGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KELNRRRTYSKTPLSGDCVWPWI*SAQPAK Trigger: CTTCGCAGGCTGGGCTGACAAGATCCATGGCCAAAC...ACAGTCACCAGAAAGTGGTGTTTTGCTATAAGTTCTTCTTCTGTTGAGTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | CAGGACTGGTCCTCCTTGCCAAGTGTGTACTCTAGACAAGTAGCTACAATGGAAGCTTCCTTGATTAATTaGCCAACCTCTGTTGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: QDWSSLPSVYSRQVATMEASLIN*PTSVDP Trigger: AGGATCAACAGAGGTTGGCAAATTAATCAAGGAAGC...TTCCATTGTAGCTACTTGTCTAGAGTACACACTTGGCAAGGAGGACCAGTCCTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | CAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAAGGAATCAGTGTGGGGTGGAAGAACACTCCTaGGTGTGCAAACTCAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: QLTFQLSCMVRSSRNQCGVEEHS*VCKLNS Trigger: GCTGTTGAGTTTGCACACCAAGGAGTGTTCTTCCAC...CCCACACTGATTCCTTGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | CAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAAGGAATCAGTGTGGGGGAGAAGACTGTGGGTaGGACAAAGAAGCCTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QLTFQLSCMVRSSRNQCGGEDCG*DKEAFV Trigger: AACAAAGGCTTCTTTGTCCAACCCACAGTCTTCTCC...CCCACACTGATTCCTTGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | TGGTCCTCCTTGCCAAGTGTGTACTCTAGACAAGTAGCTACAATGGAAAGCACCGTTCTTCTGAGATATTaGCATTGCAACTGTCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: WSSLPSVYSRQVATMESTVLLRY*HCNCLE Trigger: CTCAAGACAGTTGCAATGCAAATATCTCAGAAGAAC...GGTGCTTTCCATTGTAGCTACTTGTCTAGAGTACACACTTGGCAAGGAGGACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | TTTGCATTCGAATTACAGGGAGGCATTTCATTTGACAAGCAGTCATGGCATTCTATCACTGGGTATTGTTaGGCCATGGATCTTGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FAFELQGGISFDKQSWHSITGYC*AMDLVS Trigger: GCTGACAAGATCCATGGCCAAACAATACCCAGTGAT...AGAATGCCATGACTGCTTGTCAAATGAAATGCCTCCCTGTAATTCGAATGCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | CAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAAGGAATCAGTGTGGGTTCCATCACTGGGTATaGTTTGGCCATGGATCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QLTFQLSCMVRSSRNQCGFHHWV*FGHGSC Trigger: ACAAGATCCATGGCCAAACAATACCCAGTGATGGAA...CCCACACTGATTCCTTGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | TGGTCCTCCTTGCCAAGTGTGTACTCTAGACAAGTAGCTACAATGGAAAGCACCAAACTTCATGATTTGTaGCACTGGTCCAAATATCTC | + |
|
Preference number: 5 (lower is better) Translates to: WSSLPSVYSRQVATMESTKLHDL*HWSKYL Trigger: GAGATATTTGGACCAGTGCAACAAATCATGAAGTTT...GGTGCTTTCCATTGTAGCTACTTGTCTAGAGTACACACTTGGCAAGGAGGACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | GGAATAGAGCAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAAGGAATTCCACCAAATGGGCATaGGACAGGGACAGCCAAATA | + |
|
Preference number: 5 (lower is better) Translates to: GIEQLTFQLSCMVRSSRNSTKWA*DRDSQI Trigger: TATTTGGCTGTCCCTGTCCAATGCCCATTTGGTGGA...ATTCCTTGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTGCTCTATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | CCCCGAGGAATAGAGCAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCAAAAGATCTTGGTATGTaGAATCTTCAAGTTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRGIEQLTFQLSCMVRSSKDLGM*NLQVGQ Trigger: CTGGCCAACTTGAAGATTCAACATACCAAGATCTTT...TGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTGCTCTATTCCTCGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | TTAAAGAACTCAACAGAAGAAGAACTTATAGCAAAACACCACTTTCTGGTGACTAGCTGTGAGAGGAGTTaGCTCTGCTGGCTTGACAAC | + |
|
Preference number: 5 (lower is better) Translates to: LKNSTEEELIAKHHFLVTSCERS*LCWLDN Trigger: GTTGTCAAGCCAGCAGAGCAAACTCCTCTCACAGCT...AGTCACCAGAAAGTGGTGTTTTGCTATAAGTTCTTCTTCTGTTGAGTTCTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | CCCCGAGGAATAGAGCAGCTAACTTTTCAGTTATCATGCATGGTACGTAGTTCACAAACTCATCGTAAATaGATTCCTCAACAAAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PRGIEQLTFQLSCMVRSSQTHRK*IPQQKA Trigger: GGCTTTTTGTTGAGGAATCAATTTACGATGAGTTTG...TGAACTACGTACCATGCATGATAACTGAAAAGTTAGCTGCTCTATTCCTCGGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | AAAGAACTCAACAGAAGAAGAACTTATAGCAAAACACCACTTTCTGGTGACTGTCCAAATATCTCCTCTTaGGCAATGCGCATCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: KELNRRRTYSKTPLSGDCPNISS*AMRISS Trigger: TGATGAGATGCGCATTGCCAAAGAGGAGATATTTGG...ACAGTCACCAGAAAGTGGTGTTTTGCTATAAGTTCTTCTTCTGTTGAGTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS-3UTR CAA 90 bp | AAGAACTCAACAGAAGAAGAACTTATAGCAAAACACCACTTTCTGGTGACTGTAGTGTTGTTTGCTCTCTaGATCACATCATCCATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KNSTEEELIAKHHFLVTVVLFAL*ITSSID Trigger: ATCTATGGATGATGTGATCAAGAGAGCAAACAACAC...TACAGTCACCAGAAAGTGGTGTTTTGCTATAAGTTCTTCTTCTGTTGAGTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS CAA 72 bp | ACATTGGAGAAGACTGTGGGTTGGACAAAGAAGCCTTaGTTCCCCCAGCGACCTCCACCACACTCCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TLEKTVGWTKKP*FPQRPPPHSSL Trigger: CAAGCTGGAGTGTGGTGGAGGTCGCTGGGGGAACAAAGGCTTCTTTGTCCAACCCACAGTCTTCTCCAATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS GCA 72 bp | GTCCCCTTCTTCCACGTGGCAGATGACCTCCTCAGTTaGAGGGTTAAGGACAGGAAATTTCTTGCTGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: VPFFHVADDLLS*RVKDRKFLAAH Trigger: GTGAGCAGCAAGAAATTTCCTGTCCTTAACCCTGCAACTGAGGAGGTCATCTGCCACGTGGAAGAAGGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS CAA 90 bp | CCTGGACGCTGCAACACAAATCTGACCCTGGTGGAAGAACACTCCTaGGTGTGCAAACTCAACAGCACTGTCCAAGTCGGCATCTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: PGRCNTNLTLVEEHS*VCKLNSTVQVGICK Trigger: TTTGCAGATGCCGACTTGGACAGTGCTGTTGAGTTTGCACACCAAGGAGTGTTCTTCCACCAGGGTCAGATTTGTGTTGCAGCGTCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS CAA 90 bp | TCCTTGATTAATTTGCCAACCTCTGTTGATCCTGTGAAGGACACTTaGTCGATGTCCATGTGGGAGGAGATGGCTCCCCCTGCAGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLINLPTSVDPVKDT*SMSMWEEMAPPAVG Trigger: GCCAACTGCAGGGGGAGCCATCTCCTCCCACATGGACATCGACAAAGTGTCCTTCACAGGATCAACAGAGGTTGGCAAATTAATCAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS CAA 72 bp | AATTTGCCAACCTCTGTTGATCCTGTGAAGGACACTTaGTCGATGTCCATGTGGGAGGAGATGGCTCCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: NLPTSVDPVKDT*SMSMWEEMAPP Trigger: AGGGGGAGCCATCTCCTCCCACATGGACATCGACAAAGTGTCCTTCACAGGATCAACAGAGGTTGGCAAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS CAA 72 bp | TGCAACACAAATCTGACCCTGGTGGAAGAACACTCCTaGGTGTGCAAACTCAACAGCACTGTCCAAGTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: CNTNLTLVEEHS*VCKLNSTVQVG Trigger: GCCGACTTGGACAGTGCTGTTGAGTTTGCACACCAAGGAGTGTTCTTCCACCAGGGTCAGATTTGTGTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS CAA 72 bp | ATGTTTCCATCACTGGGTATTGTTTGGCCATGGATCTaGTCAGCCCAGCCTGCGAAGTACTGTAATGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: MFPSLGIVWPWI*SAQPAKYCNAF Trigger: AAAAGCATTACAGTACTTCGCAGGCTGGGCTGACAAGATCCATGGCCAAACAATACCCAGTGATGGAAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS CCA 72 bp | CAAACTCATCGTAAATTGATTCCTCAACAAAAAGCCTaGACGCTGCAACACAAATCTGACCCTGGTGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: QTHRKLIPQQKA*TLQHKSDPGGR Trigger: TCTTCCACCAGGGTCAGATTTGTGTTGCAGCGTCCAGGCTTTTTGTTGAGGAATCAATTTACGATGAGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS CAA 72 bp | AGTGAATATAATCAATGGACCATTCCAAGGGATGATTaGGCCACACACCCCAATAGGTTCACGCCTTGTATA | + |
|
Preference number: 6 (lower is better) Translates to: SEYNQWTIPRDD*ATHPNRFTPCI Trigger: TATACAAGGCGTGAACCTATTGGGGTGTGTGGCCAAATCATCCCTTGGAATGGTCCATTGATTATATTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS TCA 72 bp | ATGAGTTCTTCTGAGATATTTGCATTGCAACTGTCTTaGGCTCAGTGTATTCATAAAGACCATGTTCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: MSSSEIFALQLS*AQCIHKDHVRP Trigger: TGGGCGAACATGGTCTTTATGAATACACTGAGCTCAAGACAGTTGCAATGCAAATATCTCAGAAGAACTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||
| CDS CAA 72 bp | CTTCCCACTCTCAATGAGACCAAGTATTTTATTGTGTaGTTCCTTGTCAATCTGAGGACCTTGATTTATTCC | + |
|
Preference number: 6 (lower is better) Translates to: LPTLNETKYFIV*FLVNLRTLIYS Trigger: GGAATAAATCAAGGTCCTCAGATTGACAAGGAACAACACAATAAAATACTTGGTCTCATTGAGAGTGGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025656.4 |
||