Pregenerated sensors for ALDH1A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015134Ensembl transcript IDs: ENSMUST00000015278.15, ENSMUST00000174209.8, ENSMUST00000174215.2, ENSMUST00000174701.2
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGAGGAAAGAAGGTGGATGGAATATTGCTTGTCTCCGACAGGGCTaGGAGCCCCGATTCACGCCCCACATTCTCTACCTCACACTGGTT | + |
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Preference number: 1 (lower is better) Translates to: GRKEGGWNIACLRQG*EPRFTPHILYLTLV Trigger: AACCAGTGTGAGGTAGAGAATGTGGGGCGTGAATCGGGGCTCTCAGCCCTGTCGGAGACAAGCAATATTCCATCCACCTTCTTTCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR CCA 90 bp | AAACCATTGAACTCCAGTAGATCGGGTGTCCAGAAGAGAGGGTCCTaGGAAGCTGAGCACTGTCATCCTGCTTTCTGCTCGTGGCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: KPLNSSRSGVQKRGS*EAEHCHPAFCSWQA Trigger: AGCCTGCCACGAGCAGAAAGCAGGATGACAGTGCTCAGCTTCCCAGGACCCTCTCTTCTGGACACCCGATCTACTGGAGTTCAATGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR TCA 90 bp | ATCCTGTCACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCACT | + |
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Preference number: 1 (lower is better) Translates to: ILSRMVVSHHVVAGI*TLDLWKSSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTGACAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
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| 3UTR CCA 90 bp | GAGTCAGATCCTGTCACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTTGGAAGAGCAGTCGGGTGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: ESDPVTDGCEPPCGC*DLNSGPLEEQSGAL Trigger: AAGAGCACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTGACAGGATCTGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
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| 3UTR TCA 90 bp | TCAGACACACCAGAAGAGGGAGTCAGATCCTGTCACGGATGGTTGTaGGCCACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: SDTPEEGVRSCHGWL*ATMWLLGFELWTFG Trigger: TCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTGACAGGATCTGACTCCCTCTTCTGGTGTGTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
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| 3UTR TCA 90 bp | GGCGTGCCCGTTATTGAATGTGGTAGAAACGGGTATTTGAAAAAGTaGATGGTGGCTCTGAGGGTCAAATGTGAGGCTCCATTGCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: GVPVIECGRNGYLKK*MVALRVKCEAPLPR Trigger: CCTGGGCAATGGAGCCTCACATTTGACCCTCAGAGCCACCATTCACTTTTTCAAATACCCGTTTCTACCACATTCAATAACGGGCACGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR TCA 90 bp | CATCATATGCATACATCAAAGAGGAAAGGAAAACATGTTTTAACATaGCTGAGGTACCCAGGTCACTTGGTGGTCCCTTGTGGGATCCAG | + |
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Preference number: 1 (lower is better) Translates to: HHMHTSKRKGKHVLT*LRYPGHLVVPCGIQ Trigger: CTGGATCCCACAAGGGACCACCAAGTGACCTGGGTACCTCAGTCATGTTAAAACATGTTTTCCTTTCCTCTTTGATGTATGCATATGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR TCA 90 bp | CGTGGAAGACCATCTCATAACTATAGGGCAAACTCTTTGGGATGTTaGTTTGGTCATTCCAAAGTCAGGATTGTTTTCAAGGTGAACCCC | + |
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Preference number: 1 (lower is better) Translates to: RGRPSHNYRANSLGC*FGHSKVRIVFKVNP Trigger: GGGGTTCACCTTGAAAACAATCCTGACTTTGGAATGACCAAATCAACATCCCAAAGAGTTTGCCCTATAGTTATGAGATGGTCTTCCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR CCA 90 bp | GCCTATGTCGTGGAAGACCATCTCATAACTATAGGGCAAACTCTTTaGGATGTTGATTTGGTCATTCCAAAGTCAGGATTGTTTTCAAGG | + |
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Preference number: 1 (lower is better) Translates to: AYVVEDHLITIGQTL*DVDLVIPKSGLFSR Trigger: CCTTGAAAACAATCCTGACTTTGGAATGACCAAATCAACATCCCAAAGAGTTTGCCCTATAGTTATGAGATGGTCTTCCACGACATAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR-3UTR TCA 90 bp | AGGCAAAGTCAGAGCTGGGTAAGAGTTCCTCTCCAGGCAGCCCTCCAGTTTCCCCAGCTGTCCAGCTTTTaGGGAAGAAGCCGGCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: RQSQSWVRVPLQAALQFPQLSSF*GRSRPV Trigger: AACAGGCCGGCTTCTTCCTCAAAAGCTGGACAGCTG...GGGAAACTGGAGGGCTGCCTGGAGAGGAACTCTTACCCAGCTCTGACTTTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR-3UTR TCA 90 bp | AGGCAAAGTCAGAGCTGGGTAAGAGTTCCTCTCCAGGCAGCCCTCCAGTTTCCCAGGGTCCTGGGAAGCTaGGCACTGTCATCCTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: RQSQSWVRVPLQAALQFPRVLGS*ALSSCF Trigger: AAAGCAGGATGACAGTGCTCAGCTTCCCAGGACCCT...GGGAAACTGGAGGGCTGCCTGGAGAGGAACTCTTACCCAGCTCTGACTTTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR CAA 90 bp | GATCCTGTCACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCAC | + |
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Preference number: 2 (lower is better) Translates to: DPVTDGCEPPCGCWD*NSGPLEEQSGALTH Trigger: GTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTGACAGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATGTGGCAGGCTGGAGTTaGCACGGTCAGCTGTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: CAQMTPKRPQRPDLLTEHVAGWS*HGQLSS Trigger: GCTGGACAGCTGACCGTGGCAACTCCAGCCTGCCAC...ATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR CAA 90 bp | TATGGTAGTATAAGTGTTGAGGGAGGAAAGAAGGTGGATGGAATATaGCTTGTCTCCGACAGGGCTGAGAGCCCCGATTCACGCCCCACA | + |
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Preference number: 2 (lower is better) Translates to: YGSISVEGGKKVDGI*LVSDRAESPDSRPT Trigger: TGTGGGGCGTGAATCGGGGCTCTCAGCCCTGTCGGAGACAAGCAATATTCCATCCACCTTCTTTCCTCCCTCAACACTTATACTACCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR-3UTR GCA 90 bp | GGAGCTGGAGAAGAGAAAAAGGAAGTGGGCGTGCCCGTTATTGAATGTGGTAGAAATGTGAGGCTCCATTaGCCAGGGTTTGCTCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: GAGEEKKEVGVPVIECGRNVRLH*PGFALP Trigger: TGGCAGAGCAAACCCTGGGCAATGGAGCCTCACATT...TCTACCACATTCAATAACGGGCACGCCCACTTCCTTTTTCTCTTCTCCAGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR-3UTR CCA 90 bp | TGTGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATCAGAAGAGAGGGTCCTaGGAAGCTGAGCACTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: CAQMTPKRPQRPDLLTEHQKRGS*EAEHCH Trigger: ATGACAGTGCTCAGCTTCCCAGGACCCTCTCTTCTG...ATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCAGGATTGTTTTCAAGGTGAACCCCATGGTCAGTGCCCATATGCAGCCCCGTCTGCCCACAGTTTaGTCCATAAAGCATGCGTGT | + |
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Preference number: 2 (lower is better) Translates to: KVRIVFKVNPMVSAHMQPRLPTV*SIKHAC Trigger: ACACGCATGCTTTATGGACCAAACTGTGGGCAGACG...GGGCTGCATATGGGCACTGACCATGGGGTTCACCTTGAAAACAATCCTGACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR-3UTR TCA 90 bp | AAAGTCAGGATTGTTTTCAAGGTGAACCCCATGGTCAGTGCCCATATGCAGCCCGAAAGTCAAAACCATTaGACTCCAGTAGATCGGGTG | + |
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Preference number: 2 (lower is better) Translates to: KVRIVFKVNPMVSAHMQPESQNH*TPVDRV Trigger: CACCCGATCTACTGGAGTTCAATGGTTTTGACTTTC...GGGCTGCATATGGGCACTGACCATGGGGTTCACCTTGAAAACAATCCTGACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR-3UTR TCA 90 bp | TGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATTTAAGCATGCGTGTGAGTaGGAGGAAAGTCAAAACCAT | + |
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Preference number: 2 (lower is better) Translates to: CTDDPKETPKTRFAHRTFKHACE*EESQNH Trigger: ATGGTTTTGACTTTCCTCTCACTCACACGCATGCTT...AAATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR-3UTR TCA 90 bp | ATACCCAAAATTCAGTGTCCGAAGCCAAATCCTGACTTAACTAGTTATGGTAGTAGTGAATGGTGGCTCTaGGGGTCAAATGTGAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: IPKIQCPKPNPDLTSYGSSEWWL*GSNVRL Trigger: GAGCCTCACATTTGACCCTCAGAGCCACCATTCACT...ACTACCATAACTAGTTAAGTCAGGATTTGGCTTCGGACACTGAATTTTGGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR-3UTR CCA 90 bp | ATACCCAAAATTCAGTGTCCGAAGCCAAATCCTGACTTAACTAGTTATGGTAGTCTTGGTGGTCCCTTGTaGGATCCAGGTGTTACTTGT | + |
|
Preference number: 2 (lower is better) Translates to: IPKIQCPKPNPDLTSYGSLGGPL*DPGVTC Trigger: ACAAGTAACACCTGGATCCCACAAGGGACCACCAAG...ACTACCATAACTAGTTAAGTCAGGATTTGGCTTCGGACACTGAATTTTGGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR-3UTR TCA 90 bp | ATACCCAAAATTCAGTGTCCGAAGCCAAATCCTGACTTAACTAGTTATGGTAGTGTAGAAACGGGTATTTaGAAAAGTGAATGGTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: IPKIQCPKPNPDLTSYGSVETGI*KSEWWL Trigger: GAGCCACCATTCACTTTTTCAAATACCCGTTTCTAC...ACTACCATAACTAGTTAAGTCAGGATTTGGCTTCGGACACTGAATTTTGGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR-3UTR TCA 90 bp | ATACCCAAAATTCAGTGTCCGAAGCCAAATCCTGACTTAACTAGTTATGGTAGTTTCCAAGTTCAAACATaGAATTGCGCATCATATGCA | + |
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Preference number: 2 (lower is better) Translates to: IPKIQCPKPNPDLTSYGSFQVQT*NCASYA Trigger: TGCATATGATGCGCAATTTCATGTTTGAACTTGGAA...ACTACCATAACTAGTTAAGTCAGGATTTGGCTTCGGACACTGAATTTTGGGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR CCA 72 bp | CCCTTAGGACCCGCACCCCTGCACACCAAAGGCTTCTaGGGCCTTTCCATGGCAGCTTCGCTAAGCTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: PLGPAPLHTKGF*GLSMAASLSSP Trigger: TGGGGAGCTTAGCGAAGCTGCCATGGAAAGGCCCCAGAAGCCTTTGGTGTGCAGGGGTGCGGGTCCTAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR-3UTR CAA 90 bp | AGGCAAAGTCAGAGCTGGGTAAGAGTTCCTCTCCAGGCAGCCCTCCAGTTTCCCCGTGGCAGGCTGGAGTaGCCACGGTCAGCTGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: RQSQSWVRVPLQAALQFPRGRLE*PRSAVQ Trigger: CTGGACAGCTGACCGTGGCAACTCCAGCCTGCCACG...GGGAAACTGGAGGGCTGCCTGGAGAGGAACTCTTACCCAGCTCTGACTTTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR GCA 72 bp | GGGTCCTGGGAAGCTGAGCACTGTCATCCTGCTTTCTaGTCGTGGCAGGCTGGAGTTGCCACGGTCAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: GSWEAEHCHPAF*SWQAGVATVSC Trigger: ACAGCTGACCGTGGCAACTCCAGCCTGCCACGAGCAGAAAGCAGGATGACAGTGCTCAGCTTCCCAGGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR-3UTR CAA 90 bp | AGGCAAAGTCAGAGCTGGGTAAGAGTTCCTCTCCAGGCAGCCCTCCAGTTTCCCCCGTCTGCCCACAGTTaGGTCCATAAAGCATGCGTG | + |
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Preference number: 3 (lower is better) Translates to: RQSQSWVRVPLQAALQFPPSAHS*VHKACV Trigger: CACGCATGCTTTATGGACCAAACTGTGGGCAGACGG...GGGAAACTGGAGGGCTGCCTGGAGAGGAACTCTTACCCAGCTCTGACTTTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR TCA 72 bp | GAAGGTGGATGGAATATTGCTTGTCTCCGACAGGGCTaGGAGCCCCGATTCACGCCCCACATTCTCTACCTC | + |
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Preference number: 3 (lower is better) Translates to: EGGWNIACLRQG*EPRFTPHILYL Trigger: GAGGTAGAGAATGTGGGGCGTGAATCGGGGCTCTCAGCCCTGTCGGAGACAAGCAATATTCCATCCACCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR TCA 72 bp | CCAGAAGAGGGAGTCAGATCCTGTCACGGATGGTTGTaGGCCACCATGTGGTTGCTGGGATTTGAACTCTGG | + |
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Preference number: 3 (lower is better) Translates to: PEEGVRSCHGWL*ATMWLLGFELW Trigger: CCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTGACAGGATCTGACTCCCTCTTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
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| 3UTR CCA 72 bp | CCTGTCACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTTGGAAGAGCAGTCG | + |
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Preference number: 3 (lower is better) Translates to: PVTDGCEPPCGC*DLNSGPLEEQS Trigger: CGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTGACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
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| 3UTR-3UTR CAA 90 bp | AGAAGAGGGAGTCAGATCCTGTCACGGATGGTTGTGAGCCACCATGTGGTTGCTGGATGCTCACTCTGGTaGCCAAAAGGATTGGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: RRGSQILSRMVVSHHVVAGCSLW*PKGLAG Trigger: TCCTGCCAATCCTTTTGGCAACCAGAGTGAGCATCC...AGCAACCACATGGTGGCTCACAACCATCCGTGACAGGATCTGACTCCCTCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
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| 3UTR GCA 72 bp | GATCCTGTCACGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTTGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DPVTDGCEPPCG*WDLNSGPLEEQ Trigger: CTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTGACAGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
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| 3UTR TCA 72 bp | CATGGTAGTTCTAACATGAGCCCTCAGTGGCAAAGGTaGCACGTTGTCTGCCTTAGATGGGCCTATGTCGTG | + |
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Preference number: 3 (lower is better) Translates to: HGSSNMSPQWQR*HVVCLRWAYVV Trigger: CACGACATAGGCCCATCTAAGGCAGACAACGTGTCACCTTTGCCACTGAGGGCTCATGTTAGAACTACCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR TCA 72 bp | CCGTCTGCCCACAGTTTGGTCCATAAAGCATGCGTGTaGGTGAGAGGAAAGTCAAAACCATTGAACTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: PSAHSLVHKACV*VRGKSKPLNSS Trigger: ACTGGAGTTCAATGGTTTTGACTTTCCTCTCACTCACACGCATGCTTTATGGACCAAACTGTGGGCAGACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR-3UTR CAA 90 bp | AAAGTCAGGATTGTTTTCAAGGTGAACCCCATGGTCAGTGCCCATATGCAGCCCGGAAAGTCAAAACCATaGAACTCCAGTAGATCGGGT | + |
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Preference number: 3 (lower is better) Translates to: KVRIVFKVNPMVSAHMQPGKSKP*NSSRSG Trigger: ACCCGATCTACTGGAGTTCAATGGTTTTGACTTTCC...GGGCTGCATATGGGCACTGACCATGGGGTTCACCTTGAAAACAATCCTGACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR-3UTR CAA 90 bp | ACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTTGGAAGAGCAGTCGGGTGCAGGATATATAAACATTaGGAGAGCTACATGCTGTAC | + |
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Preference number: 3 (lower is better) Translates to: TMWLLGFELWTFGRAVGCRIYKH*ESYMLY Trigger: GTACAGCATGTAGCTCTCCAAATGTTTATATATCCT...GCACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
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| 3UTR CCA 72 bp | AAACAGGTAATGGAGCTGGAGAAGAGAAAAAGGAAGTaGGCGTGCCCGTTATTGAATGTGGTAGAAACGGGT | + |
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Preference number: 3 (lower is better) Translates to: KQVMELEKRKRK*ACPLLNVVETG Trigger: ACCCGTTTCTACCACATTCAATAACGGGCACGCCCACTTCCTTTTTCTCTTCTCCAGCTCCATTACCTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR-3UTR CAA 90 bp | GGAGCTGGAGAAGAGAAAAAGGAAGTGGGCGTGCCCGTTATTGAATGTGGTAGAAAACTCTTTGGGATGTaGATTTGGTCATTCCAAAGT | + |
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Preference number: 3 (lower is better) Translates to: GAGEEKKEVGVPVIECGRKLFGM*IWSFQS Trigger: ACTTTGGAATGACCAAATCAACATCCCAAAGAGTTT...TCTACCACATTCAATAACGGGCACGCCCACTTCCTTTTTCTCTTCTCCAGCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR TCA 72 bp | AAATTGTCCCTTCACCTCAACACTAATCCTTTGTTGTaGATAATCCCACTTTCCCCCTCAGAACAAGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: KLSLHLNTNPLL*IIPLSPSEQGG Trigger: CCCTCCTTGTTCTGAGGGGGAAAGTGGGATTATTCACAACAAAGGATTAGTGTTGAGGTGAAGGGACAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR CCA 72 bp | CCCAGACGGGATTTTGAAGACTACAGAACTATGCAGTaGCAGCTATTTCTTGCTGGCATGAACTTCACTAAT | + |
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Preference number: 3 (lower is better) Translates to: PRRDFEDYRTMQ*QLFLAGMNFTN Trigger: ATTAGTGAAGTTCATGCCAGCAAGAAATAGCTGCCACTGCATAGTTCTGTAGTCTTCAAAATCCCGTCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR CCA 72 bp | GTGGAAGACCATCTCATAACTATAGGGCAAACTCTTTaGGATGTTGATTTGGTCATTCCAAAGTCAGGATTG | + |
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Preference number: 3 (lower is better) Translates to: VEDHLITIGQTL*DVDLVIPKSGL Trigger: CAATCCTGACTTTGGAATGACCAAATCAACATCCCAAAGAGTTTGCCCTATAGTTATGAGATGGTCTTCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR CCA 72 bp | CACAGAACATTTAGTGAGCTCATTCTATATTCCTCCTaGGGTCAAAAAGCATTTAAATTAACCGTGGGACAC | + |
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Preference number: 3 (lower is better) Translates to: HRTFSELILYSS*GQKAFKLTVGH Trigger: GTGTCCCACGGTTAATTTAAATGCTTTTTGACCCCAGGAGGAATATAGAATGAGCTCACTAAATGTTCTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| 3UTR CCA 72 bp | ATATATAAACATTTGGAGAGCTACATGCTGTACAACTaGTTTTCTCCCAGCTTATTTATCATCGCTTGGTTT | + |
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Preference number: 3 (lower is better) Translates to: IYKHLESYMLYN*FSPSLFIIAWF Trigger: AAACCAAGCGATGATAAATAAGCTGGGAGAAAACCAGTTGTACAGCATGTAGCTCTCCAAATGTTTATATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
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| CDS-3UTR CCA 90 bp | AGGCAAAGTCAGAGCTGGGTAAGAGTTCCTCTCCAGGCAGCCCTCCAGTTTCCCCTTCCACGAACACCCTaGAGGCCGCTGTACAGCACT | + |
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Preference number: 4 (lower is better) Translates to: RQSQSWVRVPLQAALQFPLPRTP*RPLYST Trigger: AGTGCTGTACAGCGGCCTCCAGGGTGTTCGTGGAAG...GGGAAACTGGAGGGCTGCCTGGAGAGGAACTCTTACCCAGCTCTGACTTTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| CDS-3UTR GCA 90 bp | TGTGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATCTGGCCTCTGCTCAGTaGATCCAGCCGGCGCCACGG | + |
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Preference number: 4 (lower is better) Translates to: CAQMTPKRPQRPDLLTEHLASAQ*IQPAPR Trigger: CCGTGGCGCCGGCTGGATGCACTGAGCAGAGGCCAG...ATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| CDS-3UTR GCA 90 bp | GATCCTGTCACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGCCGTGAGAGGGGTCTaGTCAGCTGGCTTCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: DPVTDGCEPPCGCWDLNSAVRGV*SAGFRT Trigger: GGTCCTGAAGCCAGCTGAGCAGACCCCTCTCACGGC...AGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTGACAGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
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| CDS-3UTR TCA 90 bp | AGGCAAAGTCAGAGCTGGGTAAGAGTTCCTCTCCAGGCAGCCCTCCAGTTTCCCTGGGCTCATGCCTGGTaGAGCACACAACGTTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: RQSQSWVRVPLQAALQFPWAHAW*STQRCH Trigger: ATGACAACGTTGTGTGCTTCACCAGGCATGAGCCCA...GGGAAACTGGAGGGCTGCCTGGAGAGGAACTCTTACCCAGCTCTGACTTTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| CDS-3UTR GCA 90 bp | CCACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTTGGAAGAGCAGTCGGGTCTGTGGGGATGGTCCTaGCCTGGATTTTGTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PPCGCWDLNSGPLEEQSGLWGWS*PGFCLP Trigger: GGGCAGACAAAATCCAGGGCAGGACCATCCCCACAG...ACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS-3UTR GCA 90 bp | ACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTTGGAAGAGCAGTCGGGTGCACCCCGATGGGCTCATaGCTGGTGAAGCACACAACG | + |
|
Preference number: 4 (lower is better) Translates to: TMWLLGFELWTFGRAVGCTPMGS*LVKHTT Trigger: CGTTGTGTGCTTCACCAGGCATGAGCCCATCGGGGT...GCACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTCAGGATTGTTTTCAAGGTGAACCCCATGGTCAGTGCCCATATGCAGCCCGCCGTGAGAGGGGTCTaGTCAGCTGGCTTCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: KVRIVFKVNPMVSAHMQPAVRGV*SAGFRT Trigger: GGTCCTGAAGCCAGCTGAGCAGACCCCTCTCACGGC...GGGCTGCATATGGGCACTGACCATGGGGTTCACCTTGAAAACAATCCTGACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| 3UTR CAA 72 bp | ACTGTCATCCTGCTTTCTGCTCGTGGCAGGCTGGAGTaGCCACGGTCAGCTGTCCAGCTTTTGAGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVILLSARGRLE*PRSAVQLLRKK Trigger: CTTCTTCCTCAAAAGCTGGACAGCTGACCGTGGCAACTCCAGCCTGCCACGAGCAGAAAGCAGGATGACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| 3UTR CAA 72 bp | GTGTTGAGGGAGGAAAGAAGGTGGATGGAATATTGCTaGTCTCCGACAGGGCTGAGAGCCCCGATTCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLREERRWMEYC*SPTGLRAPIHA Trigger: GGCGTGAATCGGGGCTCTCAGCCCTGTCGGAGACAAGCAATATTCCATCCACCTTCTTTCCTCCCTCAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CCA 90 bp | CCACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTTGGAAGAGCAGTCGGGTCAACGTTGTCATCTGTaGGGATGGTCCTGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPCGCWDLNSGPLEEQSGQRCHL*GWSCPG Trigger: TCCAGGGCAGGACCATCCCCACAGATGACAACGTTG...ACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| 3UTR CAA 72 bp | ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTTGGAAGAGCAGTCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPLEEQSGA Trigger: AGCACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTCAGGATTGTTTTCAAGGTGAACCCCATGGTCAGTGCCCATATGCAGCCCACAAGGTCAGCCAGCTaGTGCAGCAACTGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVRIVFKVNPMVSAHMQPTRSAS*CSNWPL Trigger: CAGAGGCCAGTTGCTGCATCAGCTGGCTGACCTTGT...GGGCTGCATATGGGCACTGACCATGGGGTTCACCTTGAAAACAATCCTGACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR TCA 90 bp | AAAGTCAGGATTGTTTTCAAGGTGAACCCCATGGTCAGTGCCCATATGCAGCCCAAGAACACTCCCTGGTaGGCACACTCGACGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KVRIVFKVNPMVSAHMQPKNTPW*AHSTAK Trigger: CTTGGCCGTCGAGTGTGCTCACCAGGGAGTGTTCTT...GGGCTGCATATGGGCACTGACCATGGGGTTCACCTTGAAAACAATCCTGACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR TCA 90 bp | AGGCAAAGTCAGAGCTGGGTAAGAGTTCCTCTCCAGGCAGCCCTCCAGTTTCCCGTTGTCCGTAACATCTaGGAAGACCGTGGGTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RQSQSWVRVPLQAALQFPVVRNI*EDRGFD Trigger: ATCAAACCCACGGTCTTCTCAGATGTTACGGACAAC...GGGAAACTGGAGGGCTGCCTGGAGAGGAACTCTTACCCAGCTCTGACTTTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR GCA 90 bp | AAAGTCAGGATTGTTTTCAAGGTGAACCCCATGGTCAGTGCCCATATGCAGCCCCTGTGGGGATGGTCCTaGCCTGGATTTTGTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KVRIVFKVNPMVSAHMQPLWGWS*PGFCLP Trigger: GGGCAGACAAAATCCAGGGCAGGACCATCCCCACAG...GGGCTGCATATGGGCACTGACCATGGGGTTCACCTTGAAAACAATCCTGACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR GCA 90 bp | ACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTTGGAAGAGCAGTCGGGTGCATGGGAGGAAATTGCTaGTCCCACAGTGGGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TMWLLGFELWTFGRAVGCMGGNC*SHSGPK Trigger: TTTGGGCCCACTGTGGGAGCAGCAATTTCCTCCCAT...GCACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAAAGTCAGAGCTGGGTAAGAGTTCCTCTCCAGGCAGCCCTCCAGTTTCCCAGCAGCCAGCTTCAGTaGTTTGTCCAGGTTTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQSQSWVRVPLQAALQFPSSQLQ*FVQVFG Trigger: ACCAAAAACCTGGACAAAGCACTGAAGCTGGCTGCT...GGGAAACTGGAGGGCTGCCTGGAGAGGAACTCTTACCCAGCTCTGACTTTGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CCA 90 bp | TGTGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATGGGATGGTCCTGCCCTaGATTTTGTCTGCCCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: CAQMTPKRPQRPDLLTEHGMVLP*ILSAHP Trigger: CGGGTGGGCAGACAAAATCCAGGGCAGGACCATCCC...ATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CCA 90 bp | CACCAGCCCCAGAGTCTAATTCTTATTGGACTCTCTAAGGATGCTCACTCTGGTGGGATGGTCCTGCCCTaGATTTTGTCTGCCCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: HQPQSLILIGLSKDAHSGGMVLP*ILSAHP Trigger: CGGGTGGGCAGACAAAATCCAGGGCAGGACCATCCC...ACCAGAGTGAGCATCCTTAGAGAGTCCAATAAGAATTAGACTCTGGGGCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS-3UTR CCA 90 bp | GATCCTGTCACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTTTGCTGCTCCCACAGTaGGCCCAAAGCCTGGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: DPVTDGCEPPCGCWDLNSLLLPQ*AQSLVQ Trigger: TTGTACCAGGCTTTGGGCCCACTGTGGGAGCAGCAA...AGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTGACAGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGGAGAAGAGAAAAAGGAAGTGGGCGTGCCCGTTATTGAATGTGGTAGACAACGTTGTCATCTGTaGGGATGGTCCTGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GAGEEKKEVGVPVIECGRQRCHL*GWSCPG Trigger: TCCAGGGCAGGACCATCCCCACAGATGACAACGTTG...TCTACCACATTCAATAACGGGCACGCCCACTTCCTTTTTCTCTTCTCCAGCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CCA 90 bp | ACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTTGGAAGAGCAGTCGGGTGCTTGTTGATCTGCGGATaGGAGGAAATTGCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TMWLLGFELWTFGRAVGCLLICG*EEIAAP Trigger: GGGAGCAGCAATTTCCTCCCATCCGCAGATCAACAA...GCACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS-3UTR CCA 90 bp | GATCCTGTCACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTAGCAGTTGTTGTCTCTaGCAGCAGCTCACAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DPVTDGCEPPCGCWDLNSSSCCL*QQLTER Trigger: CCTCTCTGTGAGCTGCTGCCAGAGACAACAACTGCT...AGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTGACAGGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATAGCACTGGCCTTGGTTaGAGAACACTCCCTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CAQMTPKRPQRPDLLTEHSTGLG*RTLPGE Trigger: CTCACCAGGGAGTGTTCTTCAACCAAGGCCAGTGCT...ATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGGAGAAGAGAAAAAGGAAGTGGGCGTGCCCGTTATTGAATGTGGTAGAATGGGAGGAAATTGCTaGTCCCACAGTGGGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GAGEEKKEVGVPVIECGRMGGNC*SHSGPK Trigger: TTTGGGCCCACTGTGGGAGCAGCAATTTCCTCCCAT...TCTACCACATTCAATAACGGGCACGCCCACTTCCTTTTTCTCTTCTCCAGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CCA 90 bp | TGTGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATTTGCTGCTCCCACAGTaGGCCCAAAGCCTGGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: CAQMTPKRPQRPDLLTEHLLLPQ*AQSLVQ Trigger: TTGTACCAGGCTTTGGGCCCACTGTGGGAGCAGCAA...ATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR TCA 90 bp | CACCAGCCCCAGAGTCTAATTCTTATTGGACTCTCTAAGGATGCTCACTCTGGTTGGGCTCATGCCTGGTaGAGCACACAACGTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HQPQSLILIGLSKDAHSGWAHAW*STQRCH Trigger: ATGACAACGTTGTGTGCTTCACCAGGCATGAGCCCA...ACCAGAGTGAGCATCCTTAGAGAGTCCAATAAGAATTAGACTCTGGGGCTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATCATGAAGGAATGGCTTaGCGGTGTCCATGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CAQMTPKRPQRPDLLTEHHEGMA*RCPWSP Trigger: TGGAGACCATGGACACCGGCAAGCCATTCCTTCATG...ATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR GCA 90 bp | ACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTTGGAAGAGCAGTCGGGTGCGCTATCTTGTTGATCTaGGGATGGGAGGAAATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TMWLLGFELWTFGRAVGCAILLI*GWEEIA Trigger: AGCAATTTCCTCCCATCCGCAGATCAACAAGATAGC...GCACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTCAGGATTGTTTTCAAGGTGAACCCCATGGTCAGTGCCCATATGCAGCCCTTGTTGATCTGCGGATaGGAGGAAATTGCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KVRIVFKVNPMVSAHMQPLLICG*EEIAAP Trigger: GGGAGCAGCAATTTCCTCCCATCCGCAGATCAACAA...GGGCTGCATATGGGCACTGACCATGGGGTTCACCTTGAAAACAATCCTGACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CCA 90 bp | TGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATTTGAAGGGGTCTCCAACTaGCCTCTTCTTGGCGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: CTDDPKETPKTRFAHRTFEGVSN*PLLGEL Trigger: GAGTTCGCCAAGAAGAGGCCAGTTGGAGACCCCTTC...AAATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR TCA 90 bp | GGAGCTGGAGAAGAGAAAAAGGAAGTGGGCGTGCCCGTTATTGAATGTGGTAGATGCTATTCGCTCTCTTaGTCACCTCCTCCAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GAGEEKKEVGVPVIECGRCYSLS*SPPPGF Trigger: AAAACCTGGAGGAGGTGATCAAGAGAGCGAATAGCA...TCTACCACATTCAATAACGGGCACGCCCACTTCCTTTTTCTCTTCTCCAGCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| CDS-3UTR CCA 90 bp | TGTGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATTGTCATCTGTGGGGATaGTCCTGCCCTGGATTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CAQMTPKRPQRPDLLTEHCHLWG*SCPGFC Trigger: ACAAAATCCAGGGCAGGACCATCCCCACAGATGACA...ATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR TCA 90 bp | AGAAGAGGGAGTCAGATCCTGTCACGGATGGTTGTGAGCCACCATGTGGTTGCTGAAGCAAATAGTATTTaGGCTTCTCAAGGAAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: RRGSQILSRMVVSHHVVAEANSI*ASQGNV Trigger: GACGTTTCCTTGAGAAGCTCAAATACTATTTGCTTC...AGCAACCACATGGTGGCTCACAACCATCCGTGACAGGATCTGACTCCCTCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS-3UTR GCA 90 bp | TGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATTTAACTTCAGGATCGGCTaGACTGGTCCGAAAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CTDDPKETPKTRFAHRTFNFRIG*TGPKIS Trigger: GGAGATTTTCGGACCAGTGCAGCCGATCCTGAAGTT...AAATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| CDS-3UTR CCA 90 bp | TGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATTTAAAGGCATGAAGGAATaGCTTGCCGGTGTCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: CTDDPKETPKTRFAHRTFKGMKE*LAGVHG Trigger: ACCATGGACACCGGCAAGCCATTCCTTCATGCCTTT...AAATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGGAGAAGAGAAAAAGGAAGTGGGCGTGCCCGTTATTGAATGTGGTAGACGAAAATCTCCTCTTTaGCAATCCTCATGTTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GAGEEKKEVGVPVIECGRRKSPL*QSSCCP Trigger: CGGACAACATGAGGATTGCCAAAGAGGAGATTTTCG...TCTACCACATTCAATAACGGGCACGCCCACTTCCTTTTTCTCTTCTCCAGCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR GCA 90 bp | ATACCCAAAATTCAGTGTCCGAAGCCAAATCCTGACTTAACTAGTTATGGTAGTACCCCGATGGGCTCATaGCTGGTGAAGCACACAACG | + |
|
Preference number: 4 (lower is better) Translates to: IPKIQCPKPNPDLTSYGSTPMGS*LVKHTT Trigger: CGTTGTGTGCTTCACCAGGCATGAGCCCATCGGGGT...ACTACCATAACTAGTTAAGTCAGGATTTGGCTTCGGACACTGAATTTTGGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR GCA 90 bp | TGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATTTTTTGGTGAACACTGCTaGTGTGAGTCCATAGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: CTDDPKETPKTRFAHRTFFGEHC*CESIVG Trigger: ACCGACTATGGACTCACAGCAGCAGTGTTCACCAAA...AAATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CCA 90 bp | TGTGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATACTTTCTTCCACTCTTaGATTCGTGCCAGTCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CAQMTPKRPQRPDLLTEHTFFHS*IRASRC Trigger: ACAACGACTGGCACGAATCCAAGAGTGGAAGAAAGT...ATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR TCA 90 bp | GGATATATAAACATTTGGAGAGCTACATGCTGTACAACTGGTTTTCTCCCAGCTTCGACGAAAAAGGCATaGAGGAATGGCTTGCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GYINIWRATCCTTGFLPASTKKA*RNGLPV Trigger: CACCGGCAAGCCATTCCTTCATGCCTTTTTCGTCGA...AGCTGGGAGAAAACCAGTTGTACAGCATGTAGCTCTCCAAATGTTTATATATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATCCACTCTTGGATTCGTaGCAGTCGTTGTTGATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CAQMTPKRPQRPDLLTEHPLLDS*QSLLIN Trigger: ATTTATCAACAACGACTGGCACGAATCCAAGAGTGG...ATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR GCA 90 bp | TGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATTTGCTATCTTGTTGATCTaGGGATGGGAGGAAATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CTDDPKETPKTRFAHRTFAILLI*GWEEIA Trigger: AGCAATTTCCTCCCATCCGCAGATCAACAAGATAGC...AAATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR GCA 90 bp | TGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATTTGTTTTTGGTGAACACTaGTGCTGTGAGTCCATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CTDDPKETPKTRFAHRTFVFGEH*CCESIV Trigger: GACTATGGACTCACAGCAGCAGTGTTCACCAAAAAC...AAATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CCA 90 bp | GGATATATAAACATTTGGAGAGCTACATGCTGTACAACTGGTTTTCTCCCAGCTAGTGGGCCCAAAGCCTaGTACAATGTTCACCACACC | + |
|
Preference number: 4 (lower is better) Translates to: GYINIWRATCCTTGFLPASGPKA*YNVHHT Trigger: GGTGTGGTGAACATTGTACCAGGCTTTGGGCCCACT...AGCTGGGAGAAAACCAGTTGTACAGCATGTAGCTCTCCAAATGTTTATATATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS-3UTR TCA 90 bp | ATACCCAAAATTCAGTGTCCGAAGCCAAATCCTGACTTAACTAGTTATGGTAGTTCGACGAAAAAGGCATaGAGGAATGGCTTGCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IPKIQCPKPNPDLTSYGSSTKKA*RNGLPV Trigger: CACCGGCAAGCCATTCCTTCATGCCTTTTTCGTCGA...ACTACCATAACTAGTTAAGTCAGGATTTGGCTTCGGACACTGAATTTTGGGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR GCA 90 bp | TGTGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATAGCCTGTGCATAAAATaGATTGTAGCAGTTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CAQMTPKRPQRPDLLTEHSLCIK*IVAVDP Trigger: TGGATCAACTGCTACAATGCATTTTATGCACAGGCT...ATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CCA 90 bp | GGATATATAAACATTTGGAGAGCTACATGCTGTACAACTGGTTTTCTCCCAGCTTGTCATCTGTGGGGATaGTCCTGCCCTGGATTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GYINIWRATCCTTGFLPACHLWG*SCPGFC Trigger: ACAAAATCCAGGGCAGGACCATCCCCACAGATGACA...AGCTGGGAGAAAACCAGTTGTACAGCATGTAGCTCTCCAAATGTTTATATATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS-3UTR CCA 90 bp | ATACCCAAAATTCAGTGTCCGAAGCCAAATCCTGACTTAACTAGTTATGGTAGTAGTGGGCCCAAAGCCTaGTACAATGTTCACCACACC | + |
|
Preference number: 4 (lower is better) Translates to: IPKIQCPKPNPDLTSYGSSGPKA*YNVHHT Trigger: GGTGTGGTGAACATTGTACCAGGCTTTGGGCCCACT...ACTACCATAACTAGTTAAGTCAGGATTTGGCTTCGGACACTGAATTTTGGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CCA 90 bp | TGTGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATTTGAAGGGTTATATGTaGCAAACTTTCTTCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: CAQMTPKRPQRPDLLTEHLKGYM*QTFFHS Trigger: AGAGTGGAAGAAAGTTTGCCACATATAACCCTTCAA...ATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| 3UTR CAA 72 bp | GCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTaGCTCACAGAACATTTAGTGAGCTCATTCTATATT | + |
|
Preference number: 4 (lower is better) Translates to: AQMTPKRPQRPD*LTEHLVSSFYI Trigger: AATATAGAATGAGCTCACTAAATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR GCA 90 bp | ATACCCAAAATTCAGTGTCCGAAGCCAAATCCTGACTTAACTAGTTATGGTAGTACCAAATGGAGCCTGTaGATAAAATGCATTGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IPKIQCPKPNPDLTSYGSTKWSL*IKCIVA Trigger: TGCTACAATGCATTTTATGCACAGGCTCCATTTGGT...ACTACCATAACTAGTTAAGTCAGGATTTGGCTTCGGACACTGAATTTTGGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS GCA 90 bp | GGTCCCTTTCTACAAGGTCAGCCAGCTGATGCAGCAACTGGCCTCTaGTCAGTGCATCCAGCCGGCGCCACGGGGATCCCCGCTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPFLQGQPADAATGL*SVHPAGATGIPAGR Trigger: CCTTCCAGCGGGGATCCCCGTGGCGCCGGCTGGATGCACTGAGCAGAGGCCAGTTGCTGCATCAGCTGGCTGACCTTGTAGAAAGGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015278.15 ENSMUST00000174701.2 |
||
| CDS GCA 90 bp | TTCTACAAGGTCAGCCAGCTGATGCAGCAACTGGCCTCTGCTCAGTaGATCCAGCCGGCGCCACGGGGATCCCCGCTGGAAGGCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FYKVSQLMQQLASAQ*IQPAPRGSPLEGSL Trigger: CAAGCTGCCTTCCAGCGGGGATCCCCGTGGCGCCGGCTGGATGCACTGAGCAGAGGCCAGTTGCTGCATCAGCTGGCTGACCTTGTAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015278.15 ENSMUST00000174701.2 |
||
| CDS TCA 90 bp | AGAGTAGCCAGGATCGCTCGGTCCCTTTCTACAAGGTCAGCCAGCTaGTGCAGCAACTGGCCTCTGCTCAGTGCATCCAGCCGGCGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RVARIARSLSTRSAS*CSNWPLLSASSRRH Trigger: GTGGCGCCGGCTGGATGCACTGAGCAGAGGCCAGTTGCTGCATCAGCTGGCTGACCTTGTAGAAAGGGACCGAGCGATCCTGGCTACTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015278.15 ENSMUST00000174701.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAAAGTCAGAGCTGGGTAAGAGTTCCTCTCCAGGCAGCCCTCCAGTTTCCCGGCCCCTGCTCCGTTTaGGCATCGAAGGGGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RQSQSWVRVPLQAALQFPGPCSV*ASKGSP Trigger: TGGAGACCCCTTCGATGCCAAAACGGAGCAGGGGCC...GGGAAACTGGAGGGCTGCCTGGAGAGGAACTCTTACCCAGCTCTGACTTTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS TCA 90 bp | CTTCCACGAACACCCTGGAGGCCGCTGTACAGCACTGGCCTTGGTTaGAGAACACTCCCTGGTGAGCACACTCGACGGCCAAGTCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPRTPWRPLYSTGLG*RTLPGEHTRRPSPS Trigger: ACTTGGACTTGGCCGTCGAGTGTGCTCACCAGGGAGTGTTCTTCAACCAAGGCCAGTGCTGTACAGCGGCCTCCAGGGTGTTCGTGGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015278.15 ENSMUST00000174701.2 |
||
| CDS GCA 90 bp | ACCTCTTTGATGAGAGAGGCTAGGTACAGAGCCGTGAGAGGGGTCTaGTCAGCTGGCTTCAGGACCACGGTGTTCCCACAGCACAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TSLMREARYRAVRGV*SAGFRTTVFPQHRA Trigger: TGCCCTGTGCTGTGGGAACACCGTGGTCCTGAAGCCAGCTGAGCAGACCCCTCTCACGGCTCTGTACCTAGCCTCTCTCATCAAAGAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015278.15 ENSMUST00000174209.8 ENSMUST00000174215.2 ENSMUST00000174701.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAAAGTCAGAGCTGGGTAAGAGTTCCTCTCCAGGCAGCCCTCCAGTTTCCCGCGGCCTCCACAGCCTaGTCCACATCGGGCTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: RQSQSWVRVPLQAALQFPAASTA*STSGLS Trigger: AGATAAGCCCGATGTGGACAAGGCTGTGGAGGCCGC...GGGAAACTGGAGGGCTGCCTGGAGAGGAACTCTTACCCAGCTCTGACTTTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS GCA 90 bp | AGAGGGCGTACCTCTGTGGAGCCGGTGAAGGCTATCTTGTTGATCTaGGGATGGGAGGAAATTGCTGCTCCCACAGTGGGCCCAAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RGRTSVEPVKAILLI*GWEEIAAPTVGPKP Trigger: AGGCTTTGGGCCCACTGTGGGAGCAGCAATTTCCTCCCATCCGCAGATCAACAAGATAGCCTTCACCGGCTCCACAGAGGTACGCCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174209.8 ENSMUST00000174215.2 |
||
| CDS CCA 90 bp | CTGCGGATGGGAGGAAATTGCTGCTCCCACAGTGGGCCCAAAGCCTaGTACAATGTTCACCACACCCGGAGGGAACCCGACCTCTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LRMGGNCCSHSGPKA*YNVHHTRREPDLFD Trigger: ATCAAAGAGGTCGGGTTCCCTCCGGGTGTGGTGAACATTGTACCAGGCTTTGGGCCCACTGTGGGAGCAGCAATTTCCTCCCATCCGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015278.15 ENSMUST00000174209.8 ENSMUST00000174215.2 |
||
| CDS CCA 90 bp | CCAACCTCTGTGGAGCCGGTGAAGGCTATCTTGTTGATCTGCGGATaGGAGGAAATTGCTGCTCCCACAGTGGGCCCAAAGCCTGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: PTSVEPVKAILLICG*EEIAAPTVGPKPGT Trigger: TGTACCAGGCTTTGGGCCCACTGTGGGAGCAGCAATTTCCTCCCATCCGCAGATCAACAAGATAGCCTTCACCGGCTCCACAGAGGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS CCA 90 bp | CGTACCTCTGTGGAGCCGGTGAAGGCTATCTTGTTGATCTGCGGATaGGAGGAAATTGCTGCTCCCACAGTGGGCCCAAAGCCTGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: RTSVEPVKAILLICG*EEIAAPTVGPKPGT Trigger: TGTACCAGGCTTTGGGCCCACTGTGGGAGCAGCAATTTCCTCCCATCCGCAGATCAACAAGATAGCCTTCACCGGCTCCACAGAGGTACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174209.8 ENSMUST00000174215.2 |
||
| CDS-3UTR CAA 90 bp | AAAGTCAGGATTGTTTTCAAGGTGAACCCCATGGTCAGTGCCCATATGCAGCCCCCGCTGGAAGGCAGCTaGAGCGGCCTCCACAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KVRIVFKVNPMVSAHMQPPLEGS*SGLHSL Trigger: AAGGCTGTGGAGGCCGCTCAAGCTGCCTTCCAGCGG...GGGCTGCATATGGGCACTGACCATGGGGTTCACCTTGAAAACAATCCTGACTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS GCA 90 bp | GCCGGTGAAGGCTATCTTGTTGATCTGCGGATGGGAGGAAATTGCTaGTCCCACAGTGGGCCCAAAGCCTGGTACAATGTTCACCACACC | + |
|
Preference number: 5 (lower is better) Translates to: AGEGYLVDLRMGGNC*SHSGPKAWYNVHHT Trigger: GGTGTGGTGAACATTGTACCAGGCTTTGGGCCCACTGTGGGAGCAGCAATTTCCTCCCATCCGCAGATCAACAAGATAGCCTTCACCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015278.15 ENSMUST00000174209.8 ENSMUST00000174215.2 |
||
| CDS GCA 90 bp | GGAGCCGGTGAAGGCTATCTTGTTGATCTGCGGATGGGAGGAAATTaGTGCTCCCACAGTGGGCCCAAAGCCTGGTACAATGTTCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: GAGEGYLVDLRMGGN*CSHSGPKAWYNVHH Trigger: GTGGTGAACATTGTACCAGGCTTTGGGCCCACTGTGGGAGCAGCAATTTCCTCCCATCCGCAGATCAACAAGATAGCCTTCACCGGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015278.15 ENSMUST00000174209.8 ENSMUST00000174215.2 |
||
| CDS GCA 90 bp | AGCTTTCCAACCTCTGTGGAGCCGGTGAAGGCTATCTTGTTGATCTaGGGATGGGAGGAAATTGCTGCTCCCACAGTGGGCCCAAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SFPTSVEPVKAILLI*GWEEIAAPTVGPKP Trigger: AGGCTTTGGGCCCACTGTGGGAGCAGCAATTTCCTCCCATCCGCAGATCAACAAGATAGCCTTCACCGGCTCCACAGAGGTTGGAAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGGAGAAGAGAAAAAGGAAGTGGGCGTGCCCGTTATTGAATGTGGTAGAAACTTGACCTCCAAGTaGCGGATGGGGCGCGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GAGEEKKEVGVPVIECGRNLTSK*RMGRGK Trigger: CTTGCCGCGCCCCATCCGCAACTTGGAGGTCAAGTT...TCTACCACATTCAATAACGGGCACGCCCACTTCCTTTTTCTCTTCTCCAGCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGGAGAAGAGAAAAAGGAAGTGGGCGTGCCCGTTATTGAATGTGGTAGACCCCCACATTCTAGCTaGGCCCCTTCCTTCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GAGEEKKEVGVPVIECGRPPHSS*APSFFP Trigger: TGGGAAGAAGGAAGGGGCCAAGCTAGAATGTGGGGG...TCTACCACATTCAATAACGGGCACGCCCACTTCCTTTTTCTCTTCTCCAGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS GCA 90 bp | CGCAGCAGCCAGCTTCAGTGCTTTGTCCAGGTTTTTGGTGAACACTaGTGCTGTGAGTCCATAGTCGGTGCTATTCGCTCTCTTGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: RSSQLQCFVQVFGEH*CCESIVGAIRSLDH Trigger: GTGATCAAGAGAGCGAATAGCACCGACTATGGACTCACAGCAGCAGTGTTCACCAAAAACCTGGACAAAGCACTGAAGCTGGCTGCTGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CAA 90 bp | AGGCAAAGTCAGAGCTGGGTAAGAGTTCCTCTCCAGGCAGCCCTCCAGTTTCCCAATATCTTGGTGAACTaGACCTCCAAGTTGCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RQSQSWVRVPLQAALQFPNILVN*TSKLRM Trigger: CATCCGCAACTTGGAGGTCAAGTTCACCAAGATATT...GGGAAACTGGAGGGCTGCCTGGAGAGGAACTCTTACCCAGCTCTGACTTTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CAA 90 bp | ATTCTTATTGGACTCTCTAAGGATGCTCACTCTGGTTGCCAAAAGGATTGGCAGGCGGATGGGAGGAAATaGCTGCTCCCACAGTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ILIGLSKDAHSGCQKDWQADGRK*LLPQWA Trigger: GGCCCACTGTGGGAGCAGCAATTTCCTCCCATCCGC...CTGCCAATCCTTTTGGCAACCAGAGTGAGCATCCTTAGAGAGTCCAATAAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGGAGAAGAGAAAAAGGAAGTGGGCGTGCCCGTTATTGAATGTGGTAGACCGGTGAAGGCTATCTaGTTGATCTGCGGATGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GAGEEKKEVGVPVIECGRPVKAI*LICGWE Trigger: CTCCCATCCGCAGATCAACAAGATAGCCTTCACCGG...TCTACCACATTCAATAACGGGCACGCCCACTTCCTTTTTCTCTTCTCCAGCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS TCA 90 bp | TATCTGAAGGTCTTAATACAGCCTTCCAGGTCGACGAAAAAGGCATaGAGGAATGGCTTGCCGGTGTCCATGGTCTCCAGAGTAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YLKVLIQPSRSTKKA*RNGLPVSMVSRVAR Trigger: CCTGGCTACTCTGGAGACCATGGACACCGGCAAGCCATTCCTTCATGCCTTTTTCGTCGACCTGGAAGGCTGTATTAAGACCTTCAGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015278.15 ENSMUST00000174701.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAAAGTCAGAGCTGGGTAAGAGTTCCTCTCCAGGCAGCCCTCCAGTTTCCCTCGTGCCAGTCGTTGTaGATAAATATCTTGGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RQSQSWVRVPLQAALQFPSCQSL*INILVN Trigger: GTTCACCAAGATATTTATCAACAACGACTGGCACGA...GGGAAACTGGAGGGCTGCCTGGAGAGGAACTCTTACCCAGCTCTGACTTTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CAA 90 bp | TGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATTTGTCCTGCCCTGGATTTaGTCTGCCCACCCGGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: CTDDPKETPKTRFAHRTFVLPWI*SAHPAK Trigger: TTTTGCCGGGTGGGCAGACAAAATCCAGGGCAGGAC...AAATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CAA 90 bp | CACCAGCCCCAGAGTCTAATTCTTATTGGACTCTCTAAGGATGCTCACTCTGGTCCGGTGAAGGCTATCTaGTTGATCTGCGGATGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HQPQSLILIGLSKDAHSGPVKAI*LICGWE Trigger: CTCCCATCCGCAGATCAACAAGATAGCCTTCACCGG...ACCAGAGTGAGCATCCTTAGAGAGTCCAATAAGAATTAGACTCTGGGGCTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAAAGTCAGAGCTGGGTAAGAGTTCCTCTCCAGGCAGCCCTCCAGTTTCCCTTCTTCTCCTCGAGTTaGATGGTGACAGTTTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: RQSQSWVRVPLQAALQFPFFSSS*MVTVFT Trigger: AGTGAAAACTGTCACCATCAAACTCGAGGAGAAGAA...GGGAAACTGGAGGGCTGCCTGGAGAGGAACTCTTACCCAGCTCTGACTTTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CAA 90 bp | ATTCTTATTGGACTCTCTAAGGATGCTCACTCTGGTTGCCAAAAGGATTGGCAGGTCCTGCCCTGGATTTaGTCTGCCCACCCGGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ILIGLSKDAHSGCQKDWQVLPWI*SAHPAK Trigger: TTTTGCCGGGTGGGCAGACAAAATCCAGGGCAGGAC...CTGCCAATCCTTTTGGCAACCAGAGTGAGCATCCTTAGAGAGTCCAATAAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATGTGAAGCACACAACGTaGTCATCTGTGGGGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CAQMTPKRPQRPDLLTEHVKHTT*SSVGMV Trigger: GACCATCCCCACAGATGACAACGTTGTGTGCTTCAC...ATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CAA 90 bp | AAAGTCAGGATTGTTTTCAAGGTGAACCCCATGGTCAGTGCCCATATGCAGCCCGCTTTGTCCAGGTTTTaGGTGAACACTGCTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KVRIVFKVNPMVSAHMQPALSRF*VNTAAV Trigger: CACAGCAGCAGTGTTCACCAAAAACCTGGACAAAGC...GGGCTGCATATGGGCACTGACCATGGGGTTCACCTTGAAAACAATCCTGACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CAA 90 bp | AAAGTCAGGATTGTTTTCAAGGTGAACCCCATGGTCAGTGCCCATATGCAGCCCGCCAGCTTCAGTGCTTaGTCCAGGTTTTTGGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KVRIVFKVNPMVSAHMQPASFSA*SRFLVN Trigger: GTTCACCAAAAACCTGGACAAAGCACTGAAGCTGGC...GGGCTGCATATGGGCACTGACCATGGGGTTCACCTTGAAAACAATCCTGACTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGGAGAAGAGAAAAAGGAAGTGGGCGTGCCCGTTATTGAATGTGGTAGAAACTTTCTTCCACTCTaGGATTCGTGCCAGTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GAGEEKKEVGVPVIECGRNFLPL*DSCQSL Trigger: CAACGACTGGCACGAATCCAAGAGTGGAAGAAAGTT...TCTACCACATTCAATAACGGGCACGCCCACTTCCTTTTTCTCTTCTCCAGCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CAA 90 bp | ATACCCAAAATTCAGTGTCCGAAGCCAAATCCTGACTTAACTAGTTATGGTAGTGCGGATGGGAGGAAATaGCTGCTCCCACAGTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IPKIQCPKPNPDLTSYGSADGRK*LLPQWA Trigger: GGCCCACTGTGGGAGCAGCAATTTCCTCCCATCCGC...ACTACCATAACTAGTTAAGTCAGGATTTGGCTTCGGACACTGAATTTTGGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CAA 90 bp | AAAGTCAGGATTGTTTTCAAGGTGAACCCCATGGTCAGTGCCCATATGCAGCCCGATTCGTGCCAGTCGTaGTTGATAAATATCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KVRIVFKVNPMVSAHMQPDSCQS*LINILV Trigger: CACCAAGATATTTATCAACAACGACTGGCACGAATC...GGGCTGCATATGGGCACTGACCATGGGGTTCACCTTGAAAACAATCCTGACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CAA 90 bp | GGATATATAAACATTTGGAGAGCTACATGCTGTACAACTGGTTTTCTCCCAGCTGTGAAGCACACAACGTaGTCATCTGTGGGGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GYINIWRATCCTTGFLPAVKHTT*SSVGMV Trigger: GACCATCCCCACAGATGACAACGTTGTGTGCTTCAC...AGCTGGGAGAAAACCAGTTGTACAGCATGTAGCTCTCCAAATGTTTATATATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS-3UTR CAA 90 bp | TGCACAGATGACCCCAAAGAGACCCCAAAGACCAGATTTGCTCACAGAACATTTATCAGCTCGAGGATTTaGTCAAACTGCTTTTGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: CTDDPKETPKTRFAHRTFISSRI*SNCFWS Trigger: CGACCAAAAGCAGTTTGACAAAATCCTCGAGCTGAT...AAATGTTCTGTGAGCAAATCTGGTCTTTGGGGTCTCTTTGGGGTCATCTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CAA 90 bp | AAAGTCAGGATTGTTTTCAAGGTGAACCCCATGGTCAGTGCCCATATGCAGCCCTTGTTGATAAATATCTaGGTGAACTTGACCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KVRIVFKVNPMVSAHMQPLLINI*VNLTSK Trigger: CTTGGAGGTCAAGTTCACCAAGATATTTATCAACAA...GGGCTGCATATGGGCACTGACCATGGGGTTCACCTTGAAAACAATCCTGACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CAA 90 bp | GGATATATAAACATTTGGAGAGCTACATGCTGTACAACTGGTTTTCTCCCAGCTCAAATAATGGAGCAGTaGTTGTCTCTGGCAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GYINIWRATCCTTGFLPAQIMEQ*LSLAAA Trigger: AGCTGCTGCCAGAGACAACAACTGCTCCATTATTTG...AGCTGGGAGAAAACCAGTTGTACAGCATGTAGCTCTCCAAATGTTTATATATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174209.8 |
||
| CDS GCA 90 bp | GTTGAAGGGTTATATGTGGCAAACTTTCTTCCACTCTTGGATTCGTaGCAGTCGTTGTTGATAAATATCTTGGTGAACTTGACCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VEGLYVANFLPLLDS*QSLLINILVNLTSK Trigger: CTTGGAGGTCAAGTTCACCAAGATATTTATCAACAACGACTGGCACGAATCCAAGAGTGGAAGAAAGTTTGCCACATATAACCCTTCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS-3UTR CAA 90 bp | ATACCCAAAATTCAGTGTCCGAAGCCAAATCCTGACTTAACTAGTTATGGTAGTCCGAAAATCTCCTCTTaGGCAATCCTCATGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: IPKIQCPKPNPDLTSYGSPKISS*AILMLS Trigger: GGACAACATGAGGATTGCCAAAGAGGAGATTTTCGG...ACTACCATAACTAGTTAAGTCAGGATTTGGCTTCGGACACTGAATTTTGGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
||
| CDS GCA 72 bp | CTACAAGGTCAGCCAGCTGATGCAGCAACTGGCCTCTaGTCAGTGCATCCAGCCGGCGCCACGGGGATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LQGQPADAATGL*SVHPAGATGIP Trigger: GGGGATCCCCGTGGCGCCGGCTGGATGCACTGAGCAGAGGCCAGTTGCTGCATCAGCTGGCTGACCTTGTAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015278.15 ENSMUST00000174701.2 |
||
| CDS TCA 72 bp | ACACCCTGGAGGCCGCTGTACAGCACTGGCCTTGGTTaGAGAACACTCCCTGGTGAGCACACTCGACGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TPWRPLYSTGLG*RTLPGEHTRRP Trigger: TGGCCGTCGAGTGTGCTCACCAGGGAGTGTTCTTCAACCAAGGCCAGTGCTGTACAGCGGCCTCCAGGGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015278.15 ENSMUST00000174701.2 |
||
| CDS GCA 72 bp | ATGAGAGAGGCTAGGTACAGAGCCGTGAGAGGGGTCTaGTCAGCTGGCTTCAGGACCACGGTGTTCCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: MREARYRAVRGV*SAGFRTTVFPQ Trigger: CTGTGGGAACACCGTGGTCCTGAAGCCAGCTGAGCAGACCCCTCTCACGGCTCTGTACCTAGCCTCTCTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015278.15 ENSMUST00000174209.8 ENSMUST00000174215.2 ENSMUST00000174701.2 |
||
| CDS CCA 72 bp | GGAGGAAATTGCTGCTCCCACAGTGGGCCCAAAGCCTaGTACAATGTTCACCACACCCGGAGGGAACCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: GGNCCSHSGPKA*YNVHHTRREPD Trigger: GTCGGGTTCCCTCCGGGTGTGGTGAACATTGTACCAGGCTTTGGGCCCACTGTGGGAGCAGCAATTTCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015278.15 ENSMUST00000174209.8 ENSMUST00000174215.2 |
||
| CDS CAA 90 bp | TCACAGAGAGGGCGTACCTCTGTGGAGCCGGTGAAGGCTATCTTGTaGATCTGCGGATGGGAGGAAATTGCTGCTCCCACAGTGGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SQRGRTSVEPVKAIL*ICGWEEIAAPTVGP Trigger: TGGGCCCACTGTGGGAGCAGCAATTTCCTCCCATCCGCAGATCAACAAGATAGCCTTCACCGGCTCCACAGAGGTACGCCCTCTCTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174209.8 ENSMUST00000174215.2 |
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| CDS CAA 90 bp | AGCTCACAGAGAGGGCGTACCTCTGTGGAGCCGGTGAAGGCTATCTaGTTGATCTGCGGATGGGAGGAAATTGCTGCTCCCACAGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SSQRGRTSVEPVKAI*LICGWEEIAAPTVG Trigger: GCCCACTGTGGGAGCAGCAATTTCCTCCCATCCGCAGATCAACAAGATAGCCTTCACCGGCTCCACAGAGGTACGCCCTCTCTGTGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174209.8 ENSMUST00000174215.2 |
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| CDS TCA 72 bp | AGGATCGCTCGGTCCCTTTCTACAAGGTCAGCCAGCTaGTGCAGCAACTGGCCTCTGCTCAGTGCATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RIARSLSTRSAS*CSNWPLLSASS Trigger: GCTGGATGCACTGAGCAGAGGCCAGTTGCTGCATCAGCTGGCTGACCTTGTAGAAAGGGACCGAGCGATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015278.15 ENSMUST00000174701.2 |
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| CDS GCA 72 bp | CATGGTGTAATGGCCCCACACACCCCGATGGGCTCATaGCTGGTGAAGCACACAACGTTGTCATCTGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: HGVMAPHTPMGS*LVKHTTLSSVG Trigger: CCCCACAGATGACAACGTTGTGTGCTTCACCAGGCATGAGCCCATCGGGGTGTGTGGGGCCATTACACCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015278.15 ENSMUST00000174209.8 ENSMUST00000174215.2 ENSMUST00000174701.2 |
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| CDS CAA 72 bp | TTCTTGCCTCCTAGCTCCAGTGTGACCCTCTTCAGGTaGCTCCGGGAGGCGGCTTCTCTGACCAGCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: FLPPSSSVTLFR*LREAASLTSFP Trigger: TGGAAAGCTGGTCAGAGAAGCCGCCTCCCGGAGCAACCTGAAGAGGGTCACACTGGAGCTAGGAGGCAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015278.15 ENSMUST00000174701.2 |
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| CDS CAA 90 bp | CTGACCAGCTTTCCAACCTCTGTGGAGCCGGTGAAGGCTATCTTGTaGATCTGCGGATGGGAGGAAATTGCTGCTCCCACAGTGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LTSFPTSVEPVKAIL*ICGWEEIAAPTVGP Trigger: TGGGCCCACTGTGGGAGCAGCAATTTCCTCCCATCCGCAGATCAACAAGATAGCCTTCACCGGCTCCACAGAGGTTGGAAAGCTGGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| CDS CCA 72 bp | GTGGAGCCGGTGAAGGCTATCTTGTTGATCTGCGGATaGGAGGAAATTGCTGCTCCCACAGTGGGCCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: VEPVKAILLICG*EEIAAPTVGPK Trigger: CTTTGGGCCCACTGTGGGAGCAGCAATTTCCTCCCATCCGCAGATCAACAAGATAGCCTTCACCGGCTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015278.15 ENSMUST00000174209.8 ENSMUST00000174215.2 |
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| CDS CAA 72 bp | GGGCGTACCTCTGTGGAGCCGGTGAAGGCTATCTTGTaGATCTGCGGATGGGAGGAAATTGCTGCTCCCACA | + |
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Preference number: 6 (lower is better) Translates to: GRTSVEPVKAIL*ICGWEEIAAPT Trigger: TGTGGGAGCAGCAATTTCCTCCCATCCGCAGATCAACAAGATAGCCTTCACCGGCTCCACAGAGGTACGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174209.8 ENSMUST00000174215.2 |
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| CDS CAA 72 bp | AGAGGGCGTACCTCTGTGGAGCCGGTGAAGGCTATCTaGTTGATCTGCGGATGGGAGGAAATTGCTGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RGRTSVEPVKAI*LICGWEEIAAP Trigger: GGGAGCAGCAATTTCCTCCCATCCGCAGATCAACAAGATAGCCTTCACCGGCTCCACAGAGGTACGCCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174209.8 ENSMUST00000174215.2 |
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| CDS CAA 90 bp | TGCCAGTCGTTGTTGATAAATATCTTGGTGAACTTGACCTCCAAGTaGCGGATGGGGCGCGGCAAGGCAGGCGGTTTCCCATCCGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: CQSLLINILVNLTSK*RMGRGKAGGFPSGC Trigger: ACAGCCGGATGGGAAACCGCCTGCCTTGCCGCGCCCCATCCGCAACTTGGAGGTCAAGTTCACCAAGATATTTATCAACAACGACTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| CDS CAA 90 bp | TCTCTGACCAGCTTTCCAACCTCTGTGGAGCCGGTGAAGGCTATCTaGTTGATCTGCGGATGGGAGGAAATTGCTGCTCCCACAGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SLTSFPTSVEPVKAI*LICGWEEIAAPTVG Trigger: GCCCACTGTGGGAGCAGCAATTTCCTCCCATCCGCAGATCAACAAGATAGCCTTCACCGGCTCCACAGAGGTTGGAAAGCTGGTCAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| CDS CCA 72 bp | ACAGCCTTCCAGGTCGACGAAAAAGGCATGAAGGAATaGCTTGCCGGTGTCCATGGTCTCCAGAGTAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: TAFQVDEKGMKE*LAGVHGLQSSQ Trigger: CTGGCTACTCTGGAGACCATGGACACCGGCAAGCCATTCCTTCATGCCTTTTTCGTCGACCTGGAAGGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015278.15 ENSMUST00000174701.2 |
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| CDS CAA 90 bp | GCTTCTCAAGGAAACGTCGGTGGGTCTCAAATAATGGAGCAGTTGTaGTCTCTGGCAGCAGCTCACAGAGAGGGCGTACCTCTGTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: ASQGNVGGSQIMEQL*SLAAAHREGVPLWS Trigger: GCTCCACAGAGGTACGCCCTCTCTGTGAGCTGCTGCCAGAGACAACAACTGCTCCATTATTTGAGACCCACCGACGTTTCCTTGAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174209.8 ENSMUST00000174215.2 |
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| CDS CAA 72 bp | CTCATGTTGTCCGTAACATCTGAGAAGACCGTGGGTTaGATGAACAGCCCTCTGTCCTCCATGGCTGACCCC | + |
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Preference number: 6 (lower is better) Translates to: LMLSVTSEKTVG*MNSPLSSMADP Trigger: GGGGTCAGCCATGGAGGACAGAGGGCTGTTCATCAAACCCACGGTCTTCTCAGATGTTACGGACAACATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| CDS CAA 72 bp | GGAAACGTCGGTGGGTCTCAAATAATGGAGCAGTTGTaGTCTCTGGCAGCAGCTCACAGAGAGGGCGTACCT | + |
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Preference number: 6 (lower is better) Translates to: GNVGGSQIMEQL*SLAAAHREGVP Trigger: AGGTACGCCCTCTCTGTGAGCTGCTGCCAGAGACAACAACTGCTCCATTATTTGAGACCCACCGACGTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174209.8 ENSMUST00000174215.2 |
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| CDS TCA 72 bp | CAAATGGAGCCTGTGCATAAAATGCATTGTAGCAGTTaGTCCAGACTGTCCCCGACTCGAGCGCAGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: QMEPVHKMHCSS*SRLSPTRAQQP Trigger: TGGCTGCTGCGCTCGAGTCGGGGACAGTCTGGATCAACTGCTACAATGCATTTTATGCACAGGCTCCATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| CDS GCA 72 bp | GGCTATCTTGTTGATCTGCGGATGGGAGGAAATTGCTaGTCCCACAGTGGGCCCAAAGCCTGGTACAATGTT | + |
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Preference number: 6 (lower is better) Translates to: GYLVDLRMGGNC*SHSGPKAWYNV Trigger: AACATTGTACCAGGCTTTGGGCCCACTGTGGGAGCAGCAATTTCCTCCCATCCGCAGATCAACAAGATAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015278.15 ENSMUST00000174209.8 ENSMUST00000174215.2 |
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| CDS GCA 72 bp | GAAGGCTATCTTGTTGATCTGCGGATGGGAGGAAATTaGTGCTCCCACAGTGGGCCCAAAGCCTGGTACAAT | + |
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Preference number: 6 (lower is better) Translates to: EGYLVDLRMGGN*CSHSGPKAWYN Trigger: ATTGTACCAGGCTTTGGGCCCACTGTGGGAGCAGCAATTTCCTCCCATCCGCAGATCAACAAGATAGCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015278.15 ENSMUST00000174209.8 ENSMUST00000174215.2 |
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| CDS CAA 72 bp | TTGTTGATAAATATCTTGGTGAACTTGACCTCCAAGTaGCGGATGGGGCGCGGCAAGGCAGGCGGTTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LLINILVNLTSK*RMGRGKAGGFP Trigger: TGGGAAACCGCCTGCCTTGCCGCGCCCCATCCGCAACTTGGAGGTCAAGTTCACCAAGATATTTATCAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| CDS CAA 72 bp | TTTCCAACCTCTGTGGAGCCGGTGAAGGCTATCTTGTaGATCTGCGGATGGGAGGAAATTGCTGCTCCCACA | + |
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Preference number: 6 (lower is better) Translates to: FPTSVEPVKAIL*ICGWEEIAAPT Trigger: TGTGGGAGCAGCAATTTCCTCCCATCCGCAGATCAACAAGATAGCCTTCACCGGCTCCACAGAGGTTGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| CDS CAA 72 bp | CAAGGAAACGTCGGTGGGTCTCAAATAATGGAGCAGTaGTTGTCTCTGGCAGCAGCTCACAGAGAGGGCGTA | + |
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Preference number: 6 (lower is better) Translates to: QGNVGGSQIMEQ*LSLAAAHREGV Trigger: TACGCCCTCTCTGTGAGCTGCTGCCAGAGACAACAACTGCTCCATTATTTGAGACCCACCGACGTTTCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174209.8 ENSMUST00000174215.2 |
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| CDS TCA 72 bp | GTCTTAATACAGCCTTCCAGGTCGACGAAAAAGGCATaGAGGAATGGCTTGCCGGTGTCCATGGTCTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: VLIQPSRSTKKA*RNGLPVSMVSR Trigger: TCTGGAGACCATGGACACCGGCAAGCCATTCCTTCATGCCTTTTTCGTCGACCTGGAAGGCTGTATTAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015278.15 ENSMUST00000174701.2 |
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| CDS CAA 90 bp | AAGCACACAACGTTGTCATCTGTGGGGATGGTCCTGCCCTGGATTTaGTCTGCCCACCCGGCAAAATATCTGAAGGTCTTAATACAGCCT | + |
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Preference number: 6 (lower is better) Translates to: KHTTLSSVGMVLPWI*SAHPAKYLKVLIQP Trigger: AGGCTGTATTAAGACCTTCAGATATTTTGCCGGGTGGGCAGACAAAATCCAGGGCAGGACCATCCCCACAGATGACAACGTTGTGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015278.15 ENSMUST00000174209.8 ENSMUST00000174215.2 ENSMUST00000174701.2 |
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| CDS GCA 72 bp | CAGCTTCAGTGCTTTGTCCAGGTTTTTGGTGAACACTaGTGCTGTGAGTCCATAGTCGGTGCTATTCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: QLQCFVQVFGEH*CCESIVGAIRS Trigger: AGAGCGAATAGCACCGACTATGGACTCACAGCAGCAGTGTTCACCAAAAACCTGGACAAAGCACTGAAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| CDS CAA 72 bp | TTCAGGATCGGCTGCACTGGTCCGAAAATCTCCTCTTaGGCAATCCTCATGTTGTCCGTAACATCTGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: FRIGCTGPKISS*AILMLSVTSEK Trigger: CTTCTCAGATGTTACGGACAACATGAGGATTGCCAAAGAGGAGATTTTCGGACCAGTGCAGCCGATCCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| CDS GCA 72 bp | ATTCCCAGACATTTTGAAGCCACCAAATGGAGCCTGTaGATAAAATGCATTGTAGCAGTTGATCCAGACTGT | + |
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Preference number: 6 (lower is better) Translates to: IPRHFEATKWSL*IKCIVAVDPDC Trigger: ACAGTCTGGATCAACTGCTACAATGCATTTTATGCACAGGCTCCATTTGGTGGCTTCAAAATGTCTGGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| CDS CAA 72 bp | GCAAACTTTCTTCCACTCTTGGATTCGTGCCAGTCGTaGTTGATAAATATCTTGGTGAACTTGACCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: ANFLPLLDSCQS*LINILVNLTSK Trigger: CTTGGAGGTCAAGTTCACCAAGATATTTATCAACAACGACTGGCACGAATCCAAGAGTGGAAGAAAGTTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| CDS CAA 72 bp | AACTTTCTTCCACTCTTGGATTCGTGCCAGTCGTTGTaGATAAATATCTTGGTGAACTTGACCTCCAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: NFLPLLDSCQSL*INILVNLTSKL Trigger: CAACTTGGAGGTCAAGTTCACCAAGATATTTATCAACAACGACTGGCACGAATCCAAGAGTGGAAGAAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| CDS CAA 90 bp | TTCTCTAGTGTTGAAGGGTTATATGTGGCAAACTTTCTTCCACTCTaGGATTCGTGCCAGTCGTTGTTGATAAATATCTTGGTGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: FSSVEGLYVANFLPL*DSCQSLLINILVNL Trigger: CAAGTTCACCAAGATATTTATCAACAACGACTGGCACGAATCCAAGAGTGGAAGAAAGTTTGCCACATATAACCCTTCAACACTAGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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| CDS GCA 72 bp | TTATATGTGGCAAACTTTCTTCCACTCTTGGATTCGTaGCAGTCGTTGTTGATAAATATCTTGGTGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: LYVANFLPLLDS*QSLLINILVNL Trigger: CAAGTTCACCAAGATATTTATCAACAACGACTGGCACGAATCCAAGAGTGGAAGAAAGTTTGCCACATATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015278.15 |
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